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Things you should know

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You can either download the motif alignment or view it directly in your browser window. More...

Formatting options

You can view or download motif alignments in several formats. Check either the "download" button, to save the formatted alignment, or "view", to see it in your browser window, and click "Generate".

Alignment format:	Stockholm Pfam FASTA (gapped) FASTA (UNgapped)
Download/view:	Download View

There are 340 Rfam families which match this motif.

This section shows the families which have been annotated with this motif. Users should be aware that the motifs are structural constructs and do not necessarily conform to taxonomic boundaries in the way that Rfam families do. More...

Original order	Family Accession	Family Description	Number of Hits	Fraction of Hits	Sum of Bits	Image
3	RF00018	CsrB/RsmB RNA family	35	0.921	660.3
3	RF00021	Spot 42 RNA	19	1.000	334.1
3	RF00022	GcvB RNA	26	0.963	451.2
3	RF00028	Group I catalytic intron	2	0.167	58.9
3	RF00034	RprA RNA	4	0.308	45.7
3	RF00042	CopA-like RNA	12	0.324	138.1
3	RF00057	RyhB RNA	6	0.231	64.3
3	RF00077	SraB RNA	4	0.800	43.8
3	RF00079	OmrA-B family	14	0.609	150.3
3	RF00080	Manganese Mn2+ riboswitch aptamer (yybP-ykoY)	5	0.172	66.4
3	RF00082	SraG RNA	2	0.286	25.9
3	RF00083	GlmZ RNA activator of glmS mRNA	18	0.857	248.8
3	RF00084	CsrC RNA family	4	1.000	110.1
3	RF00106	RNAI	8	0.800	94.0
3	RF00110	RybB RNA	6	0.750	77.1
3	RF00111	SdsR_RyeB RNA	12	0.706	151.7
3	RF00115	McaS/IsrA RNA	4	1.000	60.8
3	RF00121	MicC RNA	8	1.000	178.7
3	RF00124	IS102 RNA	4	0.800	64.6
3	RF00125	IS128 RNA	5	1.000	64.7
3	RF00126	ryfA RNA	3	0.333	32.1
3	RF00130	mir-192/215 microRNA precursor	16	0.333	242.0
3	RF00139	Small nucleolar RNA SNORA72	7	0.241	86.0
3	RF00140	Alpha operon ribosome binding site	7	0.179	79.0
3	RF00143	mir-6 microRNA precursor	9	0.375	109.1
3	RF00166	PrrB/RsmZ RNA family	11	0.297	144.9
3	RF00185	Flavivirus 3' UTR cis-acting replication element (CRE)	7	0.083	80.7
3	RF00210	Aphthovirus internal ribosome entry site (IRES)	2	0.022	29.1
3	RF00229	Picornavirus internal ribosome entry site (IRES)	23	0.250	247.0
3	RF00236	ctRNA	13	0.867	194.4
3	RF00238	ctRNA	47	0.979	751.7
3	RF00242	ctRNA	13	0.812	174.3
3	RF00244	mir-26 microRNA precursor family	22	0.268	265.4
3	RF00257	mir-194 microRNA precursor family	16	0.348	168.5
3	RF00260	Hepatitis C virus (HCV) cis-acting replication element (CRE)	13	0.232	141.7
3	RF00280	Small nucleolar RNA SNORD51	4	0.286	52.4
3	RF00304	Small nucleolar RNA Z279/snoR105/snoR108	2	0.100	24.8
3	RF00345	Small nucleolar RNA snoR1	2	0.154	23.0
3	RF00368	sroB RNA	5	0.312	57.4
3	RF00369	sroC RNA	6	1.000	84.3
3	RF00370	sroD RNA	5	1.000	60.0
3	RF00378	Qrr RNA	30	1.000	508.8
3	RF00397	Small nucleolar RNA SNORA14	3	0.167	38.7
3	RF00398	Small nucleolar RNA SNORA15	4	0.182	43.1
3	RF00424	Small Cajal body specific RNA 16	5	0.135	61.7
3	RF00444	PrrF RNA	18	1.000	240.9
3	RF00488	Yeast U1 spliceosomal RNA	3	0.600	31.9
3	RF00489	ctRNA	6	0.600	70.5
3	RF00503	RNAIII	3	0.300	37.6
3	RF00506	Threonine operon leader	25	1.000	565.0
3	RF00512	Leucine operon leader	6	1.000	94.4
3	RF00513	Tryptophan operon leader	9	0.409	117.7
3	RF00514	Histidine operon leader	33	1.000	587.4
3	RF00515	PyrR binding site	26	0.634	373.2
3	RF00516	ylbH leader	3	1.000	43.3
3	RF00519	Makes More Granules Regulator RNA (mmgR)	81	0.931	1185.2
3	RF00534	SgrS RNA	4	0.500	49.8
3	RF00540	Small nucleolar RNA psi18S-1854	4	0.250	48.9
3	RF00552	rncO	2	0.111	21.7
3	RF00557	Ribosomal protein L10 leader	77	0.794	1238.8
3	RF00558	Ribosomal protein L20 leader	35	0.814	526.0
3	RF00563	Small nucleolar RNA SNORA53	4	0.143	53.6
3	RF00586	Small nucleolar RNA SNORA12	2	0.087	27.8
3	RF00598	Small nucleolar RNA SNORA76	4	0.182	48.7
3	RF00599	Small nucleolar RNA SNORA77	9	0.474	116.7
3	RF00600	Small nucleolar RNA SNORA79	4	0.160	49.0
3	RF00616	Listeria LhrC	10	0.833	112.4
3	RF00628	RgsA sRNA	7	0.259	82.6
3	RF00639	mir-515 microRNA precursor family	95	0.525	1185.2
3	RF00641	mir-154 microRNA precursor family	35	0.158	421.6
3	RF00643	microRNA MIR171_1	5	0.088	61.8
3	RF00645	microRNA MIR169_2	11	0.110	133.3
3	RF00661	mir-31 microRNA precursor family	3	0.107	32.8
3	RF00665	mir-290 microRNA precursor family	5	0.161	55.5
3	RF00668	microRNA mir-302	36	0.735	510.7
3	RF00689	microRNA MIR390	3	0.188	31.4
3	RF00691	microRNA mir-146	3	0.091	33.7
3	RF00708	microRNA mir-450	22	0.611	249.5
3	RF00714	MIR535 microRNA precursor family	10	0.500	141.5
3	RF00722	microRNA mir-451	18	0.818	224.5
3	RF00727	bantam microRNA precursor family	3	0.273	35.5
3	RF00746	microRNA mir-454	2	0.100	30.9
3	RF00747	microRNA mir-283	5	0.455	59.4
3	RF00749	microRNA mir-208	2	0.069	24.7
3	RF00751	microRNA mir-12	3	0.143	31.6
3	RF00756	microRNA mir-299	14	1.000	159.2
3	RF00768	MIR405 microRNA precursor family	3	1.000	51.3
3	RF00779	microRNA MIR474	2	0.182	24.7
3	RF00832	microRNA mir-71	7	0.194	85.5
3	RF00834	microRNA mir-268	2	0.667	33.4
3	RF00840	microRNA mir-374	12	0.923	204.1
3	RF00854	microRNA mir-5	12	1.000	138.1
3	RF00885	microRNA MIR821	6	0.750	92.4
3	RF00886	microRNA MIR807	3	0.100	34.8
3	RF00906	microRNA MIR1122	7	0.583	118.9
3	RF00920	microRNA MIR444	8	0.421	93.2
3	RF00928	microRNA mir-590	2	0.200	22.8
3	RF00951	microRNA mir-1302	6	0.250	70.4
3	RF00994	mir-1255 microRNA precursor family	5	0.455	64.8
3	RF01042	microRNA mir-891	2	0.286	28.3
3	RF01045	microRNA mir-544	8	0.500	96.1
3	RF01050	Saccharomyces telomerase	13	1.000	301.8
3	RF01059	microRNA mir-598	7	0.292	89.4
3	RF01061	microRNA mir-548	3	0.273	36.0
3	RF01065	23S methyl RNA motif	7	0.368	99.0
3	RF01071	Ornate Large Extremophilic RNA	3	0.150	41.5
3	RF01227	Small nucleolar RNA snoR83	4	0.571	49.0
3	RF01231	Small nucleolar RNA snoR74	2	0.222	23.3
3	RF01239	Small nucleolar RNA snR49	4	0.667	67.7
3	RF01241	Small nucleolar RNA SNORA81	12	0.429	136.6
3	RF01249	Small nucleolar RNA snR190	5	0.500	66.7
3	RF01264	Small nucleolar RNA snR83	4	0.800	65.6
3	RF01267	Small nucleolar RNA snR37	5	0.556	62.3
3	RF01270	Small nucleolar RNA snR84	2	0.333	21.0
3	RF01272	Small nucleolar RNA snR86	3	0.600	51.5
3	RF01291	Small nucleolar RNA SNORD97	3	0.150	35.8
3	RF01395	isrL Hfq binding RNA	4	1.000	52.9
3	RF01401	rseX Hfq binding RNA	5	0.417	58.6
3	RF01402	STnc150 Hfq binding RNA	9	1.000	151.5
3	RF01407	STnc560 Hfq binding RNA	12	1.000	169.0
3	RF01408	sraL Hfq binding RNA	5	0.833	54.1
3	RF01411	BsrF	2	0.182	21.7
3	RF01412	BsrG	2	0.333	31.6
3	RF01419	Antisense RNA which regulates isiA expression	64	0.208	797.7
3	RF01456	Vibrio regulatory RNA of OmpA	11	1.000	163.7
3	RF01459	Listeria sRNA rliE	4	1.000	88.0
3	RF01470	Listeria sRNA rli38	15	0.750	271.4
3	RF01472	Listeria sRNA rli40	4	1.000	77.0
3	RF01473	Listeria sRNA rli41	6	1.000	66.3
3	RF01491	Listeria sRNA rli54	10	2.000	114.8
3	RF01577	Plasmodium RNase_P	5	2.500	76.8
3	RF01670	Pseudomonas sRNA P17	3	1.000	35.5
3	RF01673	PhrS	4	0.308	48.3
3	RF01675	Pseudomonas sRNA CrcZ	5	0.263	60.6
3	RF01698	Chloroflexi-1 RNA	3	1.000	31.1
3	RF01699	Clostridiales-1 RNA	13	0.067	207.8
3	RF01701	Cyano-1 RNA	20	0.075	271.5
3	RF01702	Cyano-2 RNA	9	0.158	119.7
3	RF01705	Flavo-1 RNA	27	0.134	357.0
3	RF01715	Pedo-repair RNA	2	0.333	23.5
3	RF01719	Pseudomon-1/ErsA RNA	19	1.000	281.8
3	RF01730	Termite-leu RNA	14	0.700	242.9
3	RF01743	leu/phe leader RNA from Lactococcus	6	0.667	138.2
3	RF01758	sucA-II RNA	6	0.353	84.6
3	RF01766	cspA thermoregulator	12	0.800	171.2
3	RF01769	Enterobacteria greA leader	3	0.120	32.2
3	RF01770	Gammaprotebacteria rimP leader	46	1.000	879.8
3	RF01771	Enterobacteria rnk leader	13	1.000	189.6
3	RF01772	Pseudomonas rnk leader	15	1.000	233.0
3	RF01773	Pseudomonas rpsL leader	9	1.000	122.7
3	RF01774	Rickettsia rpsL leader	7	1.000	108.9
3	RF01775	RNA S.aureus Orsay G	3	0.429	34.5
3	RF01796	Fumarate/nitrate reductase regulator sRNA	9	0.562	111.5
3	RF01808	MicX Vibrio cholerae sRNA	10	1.000	279.2
3	RF01816	RNA Staph. aureus A	3	0.429	37.6
3	RF01819	RNA Staph. aureus D	8	1.000	111.4
3	RF01820	RNA Staph. aureus E (RoxS)	11	0.733	148.6
3	RF01848	ACEA small nucleolar RNA U3	5	0.179	60.0
3	RF01859	Phenylalanine leader peptide	65	0.915	974.4
3	RF01882	Taurine upregulated gene 1 conserved region 1	15	0.714	182.1
3	RF01899	mir-2241 microRNA precursor family	2	0.200	24.1
3	RF01946	KCNQ1 overlapping transcript 1 conserved region 1	3	0.375	40.1
3	RF01959	Archaeal small subunit ribosomal RNA	30	0.349	401.4
3	RF01960	Eukaryotic small subunit ribosomal RNA	31	0.344	574.8
3	RF02029	sraA	15	0.750	221.3
3	RF02031	tpke11	9	0.321	148.0
3	RF02045	CDKN2B antisense RNA 1 convserved region 3	2	0.111	21.7
3	RF02053	Enterobacterial sRNA STnc430	6	0.857	127.8
3	RF02055	Enterobacterial sRNA STnc380	4	0.800	80.7
3	RF02057	Salmonella enterica sRNA STnc40	17	1.000	240.2
3	RF02060	Enterobacterial sRNA STnc410	3	0.214	36.5
3	RF02064	Enterobacterial sRNA STnc370	10	1.000	135.2
3	RF02065	Enterobacterial sRNA STnc340	3	0.750	57.8
3	RF02067	Salmonella enterica sRNA STnc310	4	0.500	74.0
3	RF02074	Enterobacterial sRNA STnc240	15	1.000	257.8
3	RF02075	Enterobacterial sRNA STnc230	4	0.364	47.3
3	RF02076	Gammaproteobacterial sRNA STnc100	8	0.333	106.8
3	RF02079	Enterobacterial sRNA STnc180	4	0.400	65.3
3	RF02082	Enterobacterial sRNA STnc540	3	1.000	69.6
3	RF02084	Enterobacteria sRNA STnc130	5	0.385	58.6
3	RF02142	HOXA11 antisense RNA 1 conserved region 6	6	0.286	72.5
3	RF02143	Hydatidiform mole associated and imprinted conserved region 1	3	0.188	34.2
3	RF02190	ST7 overlapping transcript 4 conserved region 4	4	0.154	51.6
3	RF02210	WT1 antisense RNA conserved region 8	4	0.167	46.3
3	RF02225	Proteobacterial sRNA sX6	8	1.000	109.6
3	RF02230	Proteobacterial sRNA sX11	10	1.000	135.7
3	RF02241	Xanthomonadaceae sRNA Xoo2	3	1.000	46.7
3	RF02243	Proteobacterial sRNA Xoo8	4	1.000	49.6
3	RF02278	Betaproteobacteria toxic small RNA	47	0.922	747.2
3	RF02330	Tetrahymena snoRNA TtnuHACA23	2	1.000	23.8
3	RF02342	Alphaproteobacterial sRNA ar7	18	0.621	255.0
3	RF02343	Alphaproteobacterial sRNA ar9	16	0.571	256.3
3	RF02344	Alphaproteobacterial ar14	107	0.907	1510.6
3	RF02346	Alphaproteobacterial sRNA ar35	12	0.923	164.3
3	RF02351	Proteobacteria sRNA psRNA14	2	0.667	39.7
3	RF02353	Bradyrhizobiaceae sRNA BjrC68	11	0.917	146.3
3	RF02356	Alphaproteobacterial sRNA BjrC1505	23	0.920	319.0
3	RF02362	Cyanobacterial functional RNA 10	5	0.833	81.3
3	RF02363	Cyanobacterial functional RNA 11	4	1.000	51.7
3	RF02366	Cyanobacterial functional RNA 19	6	1.000	140.5
3	RF02370	Bacillus tryptophan operon leader	5	0.556	57.4
3	RF02371	PyrG leader	10	1.000	140.3
3	RF02375	Aar sRNA	13	1.000	268.8
3	RF02376	SR1 sRNA	6	1.000	108.7
3	RF02378	SurC sRNA	4	1.000	50.0
3	RF02379	Cia-dependent small RNA csRNA1	12	0.250	131.1
3	RF02384	FasX small RNA	3	0.375	31.1
3	RF02386	Staphylococcus sRNA sau-19	4	1.000	61.4
3	RF02399	Nitrogen stress-induced RNA 1	6	0.353	76.6
3	RF02405	Pseudomonas sRNA P34	5	1.000	99.9
3	RF02409	Small nucleolar RNA snoR125	5	1.000	75.2
3	RF02410	Small nucleolar RNA snoR136	3	0.375	36.8
3	RF02411	Small nucleolar RNA snoR138	3	0.429	38.2
3	RF02419	Streptococcus sRNA Spd-sr37	3	0.120	31.5
3	RF02423	Burkholderia sRNA Bp1_Cand871_SIPHT	9	0.600	103.7
3	RF02424	Burkholderia sRNA Bp2_Cand287_SIPHT	9	0.643	99.6
3	RF02425	Streptococcus sRNA SpF01	10	0.769	156.4
3	RF02430	Streptococcus sRNA SpF19	3	1.000	42.3
3	RF02431	Streptococcus sRNA SpF22	3	0.136	35.7
3	RF02432	Streptococcus sRNA SpF25	18	0.900	300.1
3	RF02433	Streptococcus sRNA SpF36	4	1.000	101.4
3	RF02434	Streptococcus sRNA SpF39	13	1.000	278.9
3	RF02435	Streptococcus sRNA SpF41	2	0.222	33.9
3	RF02442	Streptococcus sRNA SpF66	9	1.000	144.4
3	RF02445	Streptococcus sRNA SpR14	3	0.600	32.6
3	RF02449	Bacillus sRNA ncr1015	16	1.000	300.4
3	RF02450	Bacillus sRNA ncr1175	4	1.000	78.3
3	RF02451	Bacillus sRNA ncr1241	4	0.500	53.3
3	RF02452	Bacillus sRNA ncr1575	20	0.690	257.6
3	RF02454	Bacillus sRNA ncr982	6	1.000	94.6
3	RF02495	Oppression of Hydrophobic ORF by sRNA	23	0.676	274.8
3	RF02502	Rhizobiales sRNA Atu_C8	26	0.963	339.2
3	RF02503	Rhizobiales sRNA Atu_C9	9	1.000	137.2
3	RF02524	Streptococcus sRNA sagA	6	1.000	101.0
3	RF02526	Streptococcus sRNA SSRC34	8	0.500	95.3
3	RF02543	Eukaryotic large subunit ribosomal RNA	37	0.420	871.6
3	RF02551	ABC transporter regulator	6	1.000	98.3
3	RF02569	IhtA sRNA	2	0.400	23.3
3	RF02574	Rickettsia sRNA 10	3	1.000	31.7
3	RF02630	Hfq-regulated sRNA 12	2	1.000	30.2
3	RF02631	Hfq-regulated sRNA 13	2	1.000	27.5
3	RF02713	Mycoplasma sRNA MCS4	5	1.000	90.5
3	RF02728	Haemophilus regulatory RNA responsive to iron	7	1.000	109.4
3	RF02732	Aggregatibacter sRNA JA04	5	0.833	90.1
3	RF02737	Soft rot Enterobacteriaceae Rev 13 asRNA	3	1.000	38.6
3	RF02744	Soft rot Enterobacteriaceae Rev 39 5'UTR	4	1.000	75.3
3	RF02767	Yersinia sRNA 186/sR026/CsrC	4	1.000	79.6
3	RF02790	sodF sRNA	5	0.833	66.0
3	RF02834	Vibrio RNA VqmR	3	0.750	39.3
3	RF02837	Burkholderia RNA 7 (anti-hemB)	19	0.731	281.6
3	RF02838	Enterococcus sRNA 55	2	0.500	23.3
3	RF02842	Enterococcus sRNA A1	4	1.000	50.6
3	RF02844	Enterococcus sRNA A9	2	0.500	27.0
3	RF02845	Enterococcus sRNA 1C	2	1.000	51.0
3	RF02858	Actinobacillus sRNA 08	2	0.667	36.2
3	RF02859	Actinobacillus sRNA 11	2	1.000	36.8
3	RF02860	Actinobacillus sRNA 14	4	1.000	54.3
3	RF02863	Enterococcus sRNA 2410	2	0.667	45.7
3	RF02865	Burkholderia sRNA 1	4	1.000	53.8
3	RF02866	Burkholderia sRNA 16 (Bc_KC_sr1)	3	0.750	35.1
3	RF02867	Burkholderia sRNA 11	4	1.000	64.0
3	RF02868	Burkholderia sRNA 37	3	1.000	41.7
3	RF02870	Burkholderia sRNA 35	2	0.667	24.9
3	RF02875	Antisense to pHK01_035	3	1.000	31.4
3	RF02876	Antisense to pHK01_099	2	0.500	20.6
3	RF02891	ArsR-gov region gene B	4	1.000	53.5
3	RF02892	Bacillus SR6 antitoxin	3	1.000	35.8
3	RF02898	Aggregatibacter sRNA 20	5	0.833	61.0
3	RF02900	Aggregatibacter sRNA 82	2	0.500	25.7
3	RF02901	Aggregatibacter sRNA 41	2	1.000	48.0
3	RF02909	Listeria sRNA rli117	2	0.667	35.7
3	RF02948	cow-rumen-4 RNA	3	0.375	44.2
3	RF02969	DUF3800-I RNA	201	0.626	2979.0
3	RF02986	FuFi-1 RNA	63	0.371	791.8
3	RF02998	IS605-orfB-II RNA	12	0.214	149.1
3	RF03000	LOOT RNA	97	0.264	1174.2
3	RF03016	RT-12 RNA	11	0.262	127.0
3	RF03043	Prevotella-2 RNA	4	0.200	45.6
3	RF03116	Alphacoronavirus 5'UTR	4	0.235	56.0
3	RF03145	RAGATH-14 RNA	3	0.200	42.6
3	RF03150	RAGATH-15 RNA	4	0.286	44.6
3	RF03155	TD-1 RNA	19	0.679	239.6
3	RF03530	cis-regulatory element of the bglG/LicT operon	8	1.000	159.3
3	RF03532	Cis-regulator of HTH transcription factor	20	0.351	422.9
3	RF03533	Clostridioides difficile sRNA SQ1002	6	1.000	255.5
3	RF03534	Staphylococcus sRNA71 small RNA	6	0.462	83.4
3	RF03560	mir-3926 microRNA precursor family	2	1.000	42.9
3	RF03588	mir-2319 microRNA precursor family	2	1.000	22.3
3	RF03589	mir-5583 microRNA precursor family	2	1.000	25.1
3	RF03637	mir-5879 microRNA precursor family	2	1.000	33.2
3	RF03665	MIR4359 microRNA precursor family	2	1.000	22.0
3	RF03669	mir-2767 microRNA precursor family	2	0.500	23.0
3	RF03686	mir-9424 microRNA precursor family	2	1.000	23.4
3	RF03729	mir-2363 microRNA precursor family	2	1.000	23.1
3	RF03747	mir-4536 microRNA precursor family	3	1.000	35.8
3	RF03751	mir-7445 microRNA precursor family	2	1.000	34.0
3	RF03762	MIR859 microRNA precursor family	2	1.000	31.1
3	RF03765	mir-2059 microRNA precursor family	2	1.000	27.8
3	RF03796	mir-5984 microRNA precursor family	2	1.000	31.0
3	RF03799	mir-3202 microRNA precursor family	2	1.000	28.5
3	RF03800	mir-4477 microRNA precursor family	2	1.000	26.3
3	RF03802	MIR5649 microRNA precursor family	2	1.000	21.6
3	RF03843	MIR2600 microRNA precursor family	4	0.800	56.6
3	RF03845	mir-3327 microRNA precursor family	2	1.000	23.5
3	RF03862	MIR5274 microRNA precursor family	2	1.000	24.3
3	RF03871	mir-5681 microRNA precursor family	2	1.000	21.0
3	RF03883	mir-9256 microRNA precursor family	5	0.625	56.7
3	RF03896	MIR2275 microRNA precursor family	2	0.154	29.2
3	RF03940	MIR9563 microRNA precursor family	2	1.000	31.2
3	RF03941	mir-3158 microRNA precursor family	2	1.000	23.4
3	RF03975	mir-5881 microRNA precursor family	2	1.000	34.7
3	RF04068	mir-3927 microRNA precursor family	3	1.000	38.6
3	RF04069	MIR6135 microRNA precursor family	6	0.545	69.5
3	RF04071	MIR2863 microRNA precursor family	2	0.667	23.3
3	RF04079	MIR161 microRNA precursor family	2	0.500	22.8
3	RF04088	MIR812 microRNA precursor family	6	0.273	79.4
3	RF04113	MIR1523 microRNA precursor family	2	1.000	26.3
3	RF04118	MIR9481 microRNA precursor family	2	1.000	23.5
3	RF04120	MIR5998 microRNA precursor family	2	1.000	29.6
3	RF04124	MIR8565 microRNA precursor family	7	0.875	111.7
3	RF04128	MIR8562 microRNA precursor family	3	1.000	58.2
3	RF04136	MIR1862 microRNA precursor family	3	0.750	38.2
3	RF04161	mir-3688 microRNA precursor family	2	1.000	22.3
3	RF04171	MIR1509 microRNA precursor family	2	0.250	28.4
3	RF04178	Bacteroides sRNA BTnc005	3	1.000	41.7
3	RF04180	Bacteroides sRNA BTnc231	7	1.000	108.7
3	RF04182	GibS sRNA	10	0.769	216.4
3	RF04184	Bacteroides sRNA BTnc060	6	1.000	110.6
3	RF04201	MIR7510 microRNA precursor family	2	1.000	40.5
3	RF04216	mir-509 microRNA precursor family	2	0.053	27.9
3	RF04239	mir-4679 microRNA precursor family	2	1.000	23.6
3	RF04242	mir-5595 microRNA precursor family	2	1.000	23.7
3	RF04248	MIR7486 microRNA precursor family	2	0.222	23.6
3	RF04252	mir-8186 microRNA precursor family	2	1.000	25.7
3	RF04255	MIR8001 microRNA precursor family	2	1.000	33.4
3	RF04262	MIR1319 microRNA precursor family	2	1.000	39.7
3	RF04263	MIR2593 microRNA precursor family	2	0.286	22.1
3	RF04282	mir-507 microRNA precursor family	5	0.200	87.3
3	RF04299	MIR814 microRNA precursor family	3	1.000	38.5
3	RF04310	nqrA-II ncRNA motif	3	0.200	36.1