# Species tree for RF01998 # Generated from Rfam version 15.00 | +--methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen) (2) | +--alkaliphilic bacterium Su22 (1) | +--rumen bacterium NK3A20 (3) | +--Eukaryota (32) | | | +--Metazoa (21) | | | | | +--Chordata (12) | | | | | | | +--Craniata (12) | | | | | | | +--Vertebrata (12) | | | | | | | +--Euteleostomi (12) | | | | | | | +--Actinopterygii (4) | | | | | | | | | +--Neopterygii (4) | | | | | | | | | +--Teleostei (4) | | | | | | | | | +--Euteleostei (4) | | | | | | | | | +--Protacanthopterygii (3) | | | | | | | | | | | +--Salmoniformes (3) | | | | | | | | | | | +--Salmonidae (3) | | | | | | | | | | | +--Salmoninae (3) | | | | | | | | | | | +--Hucho hucho (huchen) (2) | | | | | | | | | | | +--Oncorhynchus tshawytscha (Chinook salmon) (1) | | | | | | | | | +--Neoteleostei (1) | | | | | | | | | +--Acanthomorpha (1) | | | | | | | | | +--Acanthopterygii (1) | | | | | | | | | +--Percomorpha (1) | | | | | | | | | +--Pleuronectiformes (1) | | | | | | | | | +--Pleuronectoidei (1) | | | | | | | | | +--Pleuronectidae (1) | | | | | | | | | +--Pleuronectinae (1) | | | | | | | | | +--Pleuronectes platessa (European plaice) (1) | | | | | | | +--Testudines (1) | | | | | | | | | +--Cryptodira (1) | | | | | | | | | +--Testudinoidea (1) | | | | | | | | | +--Chelydridae (1) | | | | | | | | | +--Platysternon megacephalum (big-headed turtle) (1) | | | | | | | +--Archosauria (7) | | | | | | | +--Dinosauria (7) | | | | | | | +--Saurischia (7) | | | | | | | +--Theropoda (7) | | | | | | | +--Coelurosauria (7) | | | | | | | +--Aves (7) | | | | | | | +--Palaeognathae (1) | | | | | | | | | +--Tinamiformes (1) | | | | | | | | | +--Tinamidae (1) | | | | | | | | | +--Crypturellus soui (1) | | | | | | | +--Neognathae (6) | | | | | | | +--Passeriformes (2) | | | | | | | | | +--Corvoidea (1) | | | | | | | | | | | +--Cinclosomatidae (1) | | | | | | | | | | | +--Ptilorrhoa leucosticta (1) | | | | | | | | | +--Passeroidea (1) | | | | | | | | | +--Fringillidae (1) | | | | | | | | | +--Emberizinae (1) | | | | | | | | | +--Emberizini (1) | | | | | | | | | +--Junco hyemalis (dark-eyed junco) (1) | | | | | | | +--Coraciiformes (1) | | | | | | | | | +--Alcedinidae (1) | | | | | | | | | +--Alcedo cyanopecta (1) | | | | | | | +--Caprimulgiformes (1) | | | | | | | | | +--Aegothelidae (1) | | | | | | | | | +--Aegotheles bennettii (1) | | | | | | | +--Anseriformes (2) | | | | | | | +--Anatidae (2) | | | | | | | +--Anser brachyrhynchus (pink-footed goose) (1) | | | | | | | +--Anser cygnoides (Chinese goose) (1) | | | | | +--Arthropoda (9) | | | | | +--Hexapoda (8) | | | | | | | +--Insecta (8) | | | | | | | +--Pterygota (8) | | | | | | | +--Neoptera (8) | | | | | | | +--Endopterygota (2) | | | | | | | | | +--Diptera (2) | | | | | | | | | +--Nematocera (2) | | | | | | | | | +--Sciaroidea (2) | | | | | | | | | +--Sciaridae (2) | | | | | | | | | +--Bradysia hygida (2) | | | | | | | +--Paraneoptera (6) | | | | | | | +--Hemiptera (6) | | | | | | | +--Euhemiptera (6) | | | | | | | +--Heteroptera (6) | | | | | | | +--Panheteroptera (6) | | | | | | | +--Cimicomorpha (6) | | | | | | | +--Reduviidae (6) | | | | | | | +--Triatominae (6) | | | | | | | +--Rhodnius prolixus (6) | | | | | +--Chelicerata (1) | | | | | +--Arachnida (1) | | | | | +--Acari (1) | | | | | +--Parasitiformes (1) | | | | | +--Ixodida (1) | | | | | +--Ixodoidea (1) | | | | | +--Ixodidae (1) | | | | | +--Ixodinae (1) | | | | | +--Ixodes scapularis (black-legged tick) (1) | | | +--Rhizaria (1) | | | | | +--Foraminifera (1) | | | | | +--Reticulomyxidae (1) | | | | | +--Reticulomyxa filosa (1) | | | +--Viridiplantae (9) | | | | | +--Streptophyta (9) | | | | | +--Embryophyta (5) | | | | | | | +--Tracheophyta (5) | | | | | | | +--Spermatophyta (5) | | | | | | | +--Magnoliophyta (5) | | | | | | | +--eudicotyledons (5) | | | | | | | +--coreeudicotyledons (1) | | | | | | | | | +--asterids (1) | | | | | | | | | +--lamiids (1) | | | | | | | | | +--Gentianales (1) | | | | | | | | | +--Rubiaceae (1) | | | | | | | | | +--Ixoroideae (1) | | | | | | | | | +--Coffeeae (1) | | | | | | | | | +--Coffea canephora (1) | | | | | | | +--Ranunculales (4) | | | | | | | +--Papaveraceae (4) | | | | | | | +--Papaver nudicaule (4) | | | | | +--Streptophytina (4) | | | | | +--Zygnemophyceae (4) | | | | | +--Zygnematophycidae (4) | | | | | +--Desmidiales (4) | | | | | +--Closteriaceae (4) | | | | | +--Closterium (4) | | | | | +--Closteriumperacerosum-strigosum-littoralecomplex (4) | | | | | +--Closterium sp. NIES-67 (4) | | | +--Opisthokonta (1) | | | +--Fungi (1) | | | +--Fungiincertaesedis (1) | | | +--Mucoromycota (1) | | | +--Glomeromycotina (1) | | | +--Glomeromycetes (1) | | | +--Glomerales (1) | | | +--Glomeraceae (1) | | | +--Rhizophagus (1) | | | +--Rhizophagus sp. MUCL 43196 (1) | +--unclassifiedArenibacter (2) | | | +--Arenibacter (2) | | | +--Flavobacteriaceae (2) | | | +--Flavobacteriales (2) | | | +--Flavobacteriia (2) | | | +--Bacteroidota (2) | | | +--Bacteroidota/Chlorobiotagroup (2) | | | +--FCBgroup (2) | | | +--Arenibacter sp. NBRC 103722 (2) | +--Bacteria (2524) | | | +--Bacteroidetes bacterium 3B-2 (1) | | | +--bacterium 1xD8-6 (2) | | | +--Bacteroidetes (93) | | | | | +--Sphingobacteriia (16) | | | | | | | +--Sphingobacteriales (16) | | | | | | | +--Sphingobacteriaceae (9) | | | | | | | | | +--Pedobacter ginsengisoli (5) | | | | | | | | | +--Pedobacter nyackensis (1) | | | | | | | | | +--Mucilaginibacter paludis DSM 18603 (1) | | | | | | | | | +--Mucilaginibacter oryzae (1) | | | | | | | | | +--Pedobacter hartonius (1) | | | | | | | +--Sphingobacteriaceae bacterium Gsoil 809 (1) | | | | | | | +--Sphingobacteriaceae bacterium Gsoil 524 (1) | | | | | | | +--Chitinophagaceae (5) | | | | | | | +--Filimonas lacunae (1) | | | | | | | +--Flavisolibacter sp. Vu-144 (3) | | | | | | | +--Niastella yeongjuensis (1) | | | | | +--Bacteroidia (34) | | | | | | | +--Bacteroidales (34) | | | | | | | +--Porphyromonadaceae (10) | | | | | | | | | +--Tannerella sp. oral taxon 808 (1) | | | | | | | | | +--Porphyromonas asaccharolytica DSM 20707 (7) | | | | | | | | | +--Parabacteroides sp. NS31-3 (2) | | | | | | | +--Bacteroidaceae (4) | | | | | | | | | +--Bacteroides thetaiotaomicron VPI-5482 (2) | | | | | | | | | +--Bacteroides coagulans (1) | | | | | | | | | +--Acetomicrobium faecale (1) | | | | | | | +--Prevotellaceae (20) | | | | | | | +--Prevotella multisaccharivorax DSM 17128 (15) | | | | | | | +--Prevotella bergensis DSM 17361 (1) | | | | | | | +--Prevotella timonensis CRIS 5C-B1 (4) | | | | | +--Flavobacteriia (15) | | | | | | | +--Flavobacteriales (15) | | | | | | | +--Flavobacteriaceae (15) | | | | | | | +--Flavobacterium branchiophilum (1) | | | | | | | +--Gillisia sp. ck-I2-15 (1) | | | | | | | +--Zobellia galactanivorans (1) | | | | | | | +--Salinimicrobium sp. KMM 6320 (1) | | | | | | | +--Maribacter sp. ZS1-8 (1) | | | | | | | +--Flavobacterium sp. K1 (2) | | | | | | | +--Salegentibacter sp. HD4 (1) | | | | | | | +--Arenibacter certesii (1) | | | | | | | +--Subsaximicrobium wynnwilliamsii (1) | | | | | | | +--Gelidibacter salicanalis (1) | | | | | | | +--Psychroflexus sediminis (2) | | | | | | | +--Salegentibacter flavus (1) | | | | | | | +--Kriegella aquimaris (1) | | | | | +--Cytophagia (28) | | | | | +--Cytophagales (28) | | | | | +--Cyclobacteriaceae (2) | | | | | | | +--Cyclobacteriaceae bacterium MIM18 (1) | | | | | | | +--Algoriphagus aquimarinus (1) | | | | | +--Cytophagaceae (19) | | | | | | | +--Leadbetterella byssophila DSM 17132 (19) | | | | | +--Cytophagaceae bacterium ANESC-S (1) | | | | | +--Flammeovirgaceae (6) | | | | | +--Flammeovirga pacifica (4) | | | | | +--Marivirga tractuosa DSM 4126 (1) | | | | | +--Sediminitomix flava (1) | | | +--Spirochaetota (1) | | | | | +--Spirochaetia (1) | | | | | +--Spirochaetales (1) | | | | | +--Spirochaetaceae (1) | | | | | +--Oceanispirochaeta (1) | | | | | +--Oceanispirochaeta sp. M1 (1) | | | +--bacterium 1XD21-70 (1) | | | +--Pseudomonadota (196) | | | | | +--Acidithiobacillia (4) | | | | | | | +--Acidithiobacillales (4) | | | | | | | +--Acidithiobacillaceae (4) | | | | | | | +--Acidithiobacillus sulfuriphilus (1) | | | | | | | +--Acidithiobacillus ferrianus (3) | | | | | +--Alphaproteobacteria (25) | | | | | | | +--Hyphomicrobiales (9) | | | | | | | | | +--Rhizobiaceae (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (1) | | | | | | | | | | | +--Neorhizobium (1) | | | | | | | | | | | +--Neorhizobium sp. S3-V5DH (1) | | | | | | | | | +--Roseiarcaceae (1) | | | | | | | | | | | +--Roseiarcus fermentans (1) | | | | | | | | | +--Methylobacteriaceae (4) | | | | | | | | | | | +--Methylobacterium oryzihabitans (1) | | | | | | | | | | | +--Microvirga tunisiensis (3) | | | | | | | | | +--Phyllobacteriaceae (3) | | | | | | | | | +--Mesorhizobium (3) | | | | | | | | | +--Mesorhizobium sp. L-8-10 (3) | | | | | | | +--Rhodospirillales (12) | | | | | | | | | +--Azospirillaceae (12) | | | | | | | | | +--Azospirillum thermophilum (10) | | | | | | | | | +--Nitrospirillum (2) | | | | | | | | | +--Nitrospirillum amazonense CBAmc (2) | | | | | | | +--Holosporales (3) | | | | | | | | | +--CandidatusParacaedibacteraceae (3) | | | | | | | | | +--Candidatus Finniella inopinata (3) | | | | | | | +--Emcibacterales (1) | | | | | | | +--Emcibacteraceae (1) | | | | | | | +--Paremcibacter congregatus (1) | | | | | +--Gammaproteobacteria (91) | | | | | | | +--Pasteurellales (2) | | | | | | | | | +--Psittacicellaceae (2) | | | | | | | | | +--Psittacicella hinzii (2) | | | | | | | +--Enterobacterales (7) | | | | | | | | | +--Pectobacteriaceae (1) | | | | | | | | | | | +--Affinibrenneria salicis (1) | | | | | | | | | +--Enterobacteriaceae (1) | | | | | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (1) | | | | | | | | | | | +--Tenebrionibacter intestinalis (1) | | | | | | | | | +--Morganellaceae (2) | | | | | | | | | | | +--Providencia (2) | | | | | | | | | | | +--Providencia heimbachae ATCC 35613 (2) | | | | | | | | | +--Bruguierivoracaceae (3) | | | | | | | | | +--Sodalis ligni (1) | | | | | | | | | +--Sodalis (2) | | | | | | | | | +--Sodalis-like symbiont of Philaenus spumarius (2) | | | | | | | +--Aeromonadales (4) | | | | | | | | | +--Succinivibrionaceae (4) | | | | | | | | | +--Succinivibrio (4) | | | | | | | | | +--Succinivibrio dextrinosolvens DSM 3072 (4) | | | | | | | +--Methylococcales (13) | | | | | | | | | +--Methylococcaceae (13) | | | | | | | | | +--Methyloprofundus (7) | | | | | | | | | | | +--Methyloprofundus sp. (7) | | | | | | | | | +--Methylomonas (1) | | | | | | | | | | | +--Methylomonas sp. LL1 (1) | | | | | | | | | +--Candidatus Methylospira mobilis (4) | | | | | | | | | +--Methylocaldum marinum (1) | | | | | | | +--Acidiferrobacterales (1) | | | | | | | | | +--Acidiferrobacteraceae (1) | | | | | | | | | +--Acidiferrobacter (1) | | | | | | | | | +--Acidiferrobacter sp. SPIII_3 (1) | | | | | | | +--Alteromonadales (15) | | | | | | | | | +--Pseudoalteromonadaceae (1) | | | | | | | | | | | +--Pseudoalteromonas (1) | | | | | | | | | | | +--Pseudoalteromonas sp. NBT06-2 (1) | | | | | | | | | +--Shewanellaceae (3) | | | | | | | | | | | +--Parashewanella curva (2) | | | | | | | | | | | +--Shewanella (1) | | | | | | | | | | | +--Shewanella sp. XMDDZSB0408 (1) | | | | | | | | | +--Psychromonadaceae (1) | | | | | | | | | | | +--Psychromonas (1) | | | | | | | | | | | +--Psychromonas sp. Urea-02u-13 (1) | | | | | | | | | +--Idiomarinaceae (1) | | | | | | | | | | | +--Aliidiomarina sanyensis (1) | | | | | | | | | +--Alteromonadaceae (9) | | | | | | | | | +--Paraglaciecola (6) | | | | | | | | | | | +--Paraglaciecola sp. MB-3u-78 (6) | | | | | | | | | +--Alteromonas/Salinimonasgroup (3) | | | | | | | | | +--Alteromonas (1) | | | | | | | | | | | +--Alteromonas sp. KUL42 (1) | | | | | | | | | +--Alteromonas pelagimontana (1) | | | | | | | | | +--Alteromonas aestuariivivens (1) | | | | | | | +--Gammaproteobacteriaincertaesedis (1) | | | | | | | | | +--endosymbiont of Escarpia spicata (1) | | | | | | | +--Cellvibrionales (15) | | | | | | | | | +--Microbulbiferaceae (12) | | | | | | | | | | | +--Microbulbifer (11) | | | | | | | | | | | | | +--Microbulbifer sp. THAF38 (11) | | | | | | | | | | | +--Microbulbifer rhizosphaerae (1) | | | | | | | | | +--Cellvibrionaceae (3) | | | | | | | | | +--Marinibactrum halimedae (2) | | | | | | | | | +--Exilibacterium tricleocarpae (1) | | | | | | | +--Xanthomonadales (3) | | | | | | | | | +--Rhodanobacteraceae (3) | | | | | | | | | +--Dyella (3) | | | | | | | | | +--Dyella sp. M7H15-1 (3) | | | | | | | +--Chromatiales (20) | | | | | | | | | +--Ectothiorhodospiraceae (2) | | | | | | | | | | | +--Spiribacter halobius (1) | | | | | | | | | | | +--Acidihalobacter aeolianus (1) | | | | | | | | | +--Chromatiaceae (1) | | | | | | | | | | | +--Imhoffiella purpurea (1) | | | | | | | | | +--Granulosicoccaceae (9) | | | | | | | | | | | +--Granulosicoccus (9) | | | | | | | | | | | +--Granulosicoccus antarcticus IMCC3135 (9) | | | | | | | | | +--Wenzhouxiangellaceae (8) | | | | | | | | | +--Wenzhouxiangella (8) | | | | | | | | | +--Wenzhouxiangella sp. AB-CW3 (8) | | | | | | | +--Thiotrichales (1) | | | | | | | | | +--Thiotrichaceae (1) | | | | | | | | | +--Leucothrix pacifica (1) | | | | | | | +--Oceanospirillales (4) | | | | | | | | | +--Halomonadaceae (2) | | | | | | | | | | | +--Halomonas zhuhanensis (1) | | | | | | | | | | | +--Pistricoccus aurantiacus (1) | | | | | | | | | +--Oceanospirillaceae (2) | | | | | | | | | +--Nitrincola tibetensis (2) | | | | | | | +--Pseudomonadales (5) | | | | | | | +--Marinobacteraceae (3) | | | | | | | | | +--Marinobacter (3) | | | | | | | | | +--Marinobacter sp. B9-2 (1) | | | | | | | | | +--Marinobacter sp. R17 (2) | | | | | | | +--Pseudomonadaceae (2) | | | | | | | +--Pseudomonas (1) | | | | | | | | | +--Pseudomonas sp. SSM44 (1) | | | | | | | +--Azotobactergroup (1) | | | | | | | +--Azotobacter (1) | | | | | | | +--Azotobacter chroococcum NCIMB 8003 (1) | | | | | +--Betaproteobacteria (73) | | | | | | | +--Burkholderiales (54) | | | | | | | | | +--Alcaligenaceae (3) | | | | | | | | | | | +--Pusillimonas (3) | | | | | | | | | | | +--Pusillimonas sp. DMV24BSW_D (2) | | | | | | | | | | | +--Pusillimonas sp. T2 (1) | | | | | | | | | +--Burkholderiales bacterium (1) | | | | | | | | | +--Burkholderiaceae (13) | | | | | | | | | | | +--Trinickia terrae (4) | | | | | | | | | | | +--Paraburkholderia (3) | | | | | | | | | | | | | +--Paraburkholderia sp. BL23I1N1 (2) | | | | | | | | | | | | | +--Paraburkholderia sp. BL10I2N1 (1) | | | | | | | | | | | +--Paraburkholderia panacisoli (3) | | | | | | | | | | | +--Quisquiliibacterium transsilvanicum (1) | | | | | | | | | | | +--Paraburkholderia saeva (1) | | | | | | | | | | | +--Paraburkholderia steynii (1) | | | | | | | | | +--Burkholderiales bacterium PBB5 (1) | | | | | | | | | +--Comamonadaceae (15) | | | | | | | | | | | +--Comamonadaceae bacterium G21597-S1 (1) | | | | | | | | | | | +--Comamonas flocculans (1) | | | | | | | | | | | +--Hydrogenophaga (1) | | | | | | | | | | | | | +--Hydrogenophaga sp. BPS33 (1) | | | | | | | | | | | +--Curvibacter (11) | | | | | | | | | | | | | +--Curvibacter sp. AEP1-3 (11) | | | | | | | | | | | +--Diaphorobacter ruginosibacter (1) | | | | | | | | | +--Oxalobacteraceae (18) | | | | | | | | | | | +--Telluriagroup (14) | | | | | | | | | | | | | +--Massilia violaceinigra (2) | | | | | | | | | | | | | +--Massilia eurypsychrophila (3) | | | | | | | | | | | | | +--Pseudoduganella ginsengisoli (1) | | | | | | | | | | | | | +--Massilia cavernae (6) | | | | | | | | | | | | | +--Massilia forsythiae (1) | | | | | | | | | | | | | +--Massilia psychrophila (1) | | | | | | | | | | | +--Noviherbaspirillum saxi (3) | | | | | | | | | | | +--Noviherbaspirillum sedimenti (1) | | | | | | | | | +--Sphaerotilaceae (3) | | | | | | | | | +--Ideonella livida (1) | | | | | | | | | +--Roseateles (2) | | | | | | | | | +--Pelomonas sp. HMWF004 (2) | | | | | | | +--Rhodocyclales (11) | | | | | | | | | +--Zoogloeaceae (11) | | | | | | | | | +--Pseudothauera lacus (2) | | | | | | | | | +--Pseudazoarcus pumilus (6) | | | | | | | | | +--Denitromonas iodatirespirans (3) | | | | | | | +--Neisseriales (4) | | | | | | | | | +--Chitinibacteraceae (4) | | | | | | | | | +--Chitinimonas (3) | | | | | | | | | | | +--Chitinimonas sp. BJB300 (3) | | | | | | | | | +--Chitinimonas arctica (1) | | | | | | | +--Nitrosomonadales (4) | | | | | | | +--Sterolibacteriaceae (2) | | | | | | | | | +--Sulfuritalea (2) | | | | | | | | | +--Sulfuritalea sp. (2) | | | | | | | +--Sulfuricellaceae (2) | | | | | | | +--Sulfuricella (2) | | | | | | | +--Sulfuricella sp. (2) | | | | | +--Pseudomonadota bacterium (2) | | | | | +--Hydrogenophilia (1) | | | | | +--Hydrogenophilaliaincertaesedis (1) | | | | | +--Pelomicrobium methylotrophicum (1) | | | +--Tenericutes (5) | | | | | +--Mollicutes (5) | | | | | +--Anaeroplasmatales (5) | | | | | +--Anaeroplasmataceae (5) | | | | | +--Anaeroplasma bactoclasticum (5) | | | +--Acidobacteriota (1) | | | | | +--Terriglobia (1) | | | | | +--CandidatusAcidoferrales (1) | | | | | +--Candidatus Acidoferrum panamensis (1) | | | +--Thermotogae (1) | | | | | +--Thermotogales (1) | | | | | +--Thermotogaceae (1) | | | | | +--Thermotogaceae bacterium SulfLac1 (1) | | | +--Acidobacteria (3) | | | | | +--Acidobacteriales (1) | | | | | | | +--Acidobacteriaceae (1) | | | | | | | +--Acidobacterium capsulatum ATCC 51196 (1) | | | | | +--Holophagae (2) | | | | | +--Acanthopleuribacterales (2) | | | | | +--Acanthopleuribacteraceae (2) | | | | | +--Acanthopleuribacter pedis (2) | | | +--Bacteroidetes bacterium DQHS-4 (1) | | | +--Atribacterota (2) | | | | | +--Atribacteria (2) | | | | | +--Atribacterales (2) | | | | | +--Atribacteraceae (2) | | | | | +--Atribacter laminatus (2) | | | +--Bacteroidetes bacterium YM8-076 (1) | | | +--PVCgroup (95) | | | | | +--Verrucomicrobiota (8) | | | | | | | +--Verrucomicrobiotaincertaesedis (1) | | | | | | | | | +--Lentimonas (1) | | | | | | | | | +--Lentimonas sp. CC11 (1) | | | | | | | +--Opitutae (6) | | | | | | | | | +--Puniceicoccales (6) | | | | | | | | | +--Pelagicoccaceae (6) | | | | | | | | | +--Pelagicoccus enzymogenes (6) | | | | | | | +--Verrucomicrobiae (1) | | | | | | | +--Verrucomicrobiales (1) | | | | | | | +--Verrucomicrobiaceae (1) | | | | | | | +--Phragmitibacter flavus (1) | | | | | +--Kiritimatiellota (3) | | | | | | | +--Kiritimatiellia (2) | | | | | | | | | +--Kiritimatiellales (2) | | | | | | | | | +--Pontiellaceae (2) | | | | | | | | | +--Pontiella desulfatans (2) | | | | | | | +--Tichowtungiia (1) | | | | | | | +--Tichowtungiales (1) | | | | | | | +--Tichowtungiaceae (1) | | | | | | | +--Tichowtungia aerotolerans (1) | | | | | +--Kiritimatiellaeota (1) | | | | | | | +--Kiritimatiellae (1) | | | | | | | +--Kiritimatiellales (1) | | | | | | | +--Kiritimatiellaceae (1) | | | | | | | +--Kiritimatiella glycovorans (1) | | | | | +--Planctomycetota (59) | | | | | | | +--Planctomycetes bacterium Pla133 (2) | | | | | | | +--Phycisphaerae (1) | | | | | | | | | +--Sedimentisphaerales (1) | | | | | | | | | +--Sedimentisphaeraceae (1) | | | | | | | | | +--Sedimentisphaera salicampi (1) | | | | | | | +--Planctomycetes bacterium CA13 (3) | | | | | | | +--CandidatusUabimicrobiia (1) | | | | | | | | | +--CandidatusUabimicrobiales (1) | | | | | | | | | +--CandidatusUabimicrobiaceae (1) | | | | | | | | | +--Uabimicrobium amorphum (1) | | | | | | | +--Planctomycetia (50) | | | | | | | | | +--Gemmatales (1) | | | | | | | | | | | +--Gemmataceae (1) | | | | | | | | | | | +--Frigoriglobus tundricola (1) | | | | | | | | | +--Pirellulales (37) | | | | | | | | | | | +--Pirellulaceae (35) | | | | | | | | | | | | | +--Allorhodopirellula solitaria (2) | | | | | | | | | | | | | +--Rubripirellula reticaptiva (2) | | | | | | | | | | | | | +--Lignipirellula cremea (6) | | | | | | | | | | | | | +--Neorhodopirellula pilleata (10) | | | | | | | | | | | | | +--Stieleria varia (3) | | | | | | | | | | | | | +--Roseimaritima multifibrata (6) | | | | | | | | | | | | | +--Rubripirellula tenax (2) | | | | | | | | | | | | | +--Novipirellula galeiformis (1) | | | | | | | | | | | | | +--Anatilimnocola aggregata (2) | | | | | | | | | | | | | +--Novipirellula artificiosorum (1) | | | | | | | | | | | +--Lacipirellulaceae (2) | | | | | | | | | | | +--Posidoniimonas polymericola (2) | | | | | | | | | +--Planctomycetales (12) | | | | | | | | | +--Planctomycetales bacterium 10988 (1) | | | | | | | | | +--Planctomycetaceae (11) | | | | | | | | | +--Maioricimonas rarisocia (10) | | | | | | | | | +--Planctomycetaceae bacterium (1) | | | | | | | +--CandidatusBrocadiia (2) | | | | | | | +--CandidatusBrocadiales (2) | | | | | | | +--CandidatusScalinduaceae (2) | | | | | | | +--Candidatus Scalindua japonica (2) | | | | | +--Planctomycetes (22) | | | | | | | +--Phycisphaerae (1) | | | | | | | | | +--Phycisphaerae bacterium ST-NAGAB-D1 (1) | | | | | | | +--Planctomycetia (21) | | | | | | | +--Planctomycetales (21) | | | | | | | +--Isosphaeraceae (2) | | | | | | | | | +--Singulisphaera (2) | | | | | | | | | +--Singulisphaera acidiphila DSM 18658 (2) | | | | | | | +--Planctomycetaceae (19) | | | | | | | +--Rhodopirellula (1) | | | | | | | | | +--Rhodopirellula maiorica SM1 (1) | | | | | | | +--Fuerstia marisgermanicae (5) | | | | | | | +--Pirellula sp. SH-Sr6A (13) | | | | | +--Verrucomicrobia (1) | | | | | | | +--Opitutae (1) | | | | | | | +--Opitutales (1) | | | | | | | +--Opitutaceae (1) | | | | | | | +--Opitutaceae bacterium TSB47 (1) | | | | | +--Chlamydiota (1) | | | | | +--Chlamydiia (1) | | | | | +--Chlamydiales (1) | | | | | +--Chlamydiales bacterium SCGC AG-110-P3 (1) | | | +--Haloplasmatales (2) | | | | | +--Haloplasmataceae (2) | | | | | +--Haloplasma contractile SSD-17B (2) | | | +--Actinobacteria (35) | | | | | +--Coriobacteridae (2) | | | | | | | +--Coriobacteriales (2) | | | | | | | +--Coriobacterineae (2) | | | | | | | +--Coriobacteriaceae (1) | | | | | | | | | +--Paraeggerthella hongkongensis (1) | | | | | | | +--Coriobacteriaceae bacterium BV3Ac1 (1) | | | | | +--Actinobacteridae (33) | | | | | +--Actinomycetales (33) | | | | | +--Streptomycineae (5) | | | | | | | +--Streptomycetaceae (5) | | | | | | | +--Streptomyces daliensis (1) | | | | | | | +--Streptomyces netropsis (1) | | | | | | | +--Streptomyces brasiliensis (3) | | | | | +--Corynebacterineae (2) | | | | | | | +--Mycobacteriaceae (2) | | | | | | | +--Mycobacterium intermedium (1) | | | | | | | +--Mycobacterium heidelbergense (1) | | | | | +--Streptosporangineae (21) | | | | | | | +--Nocardiopsaceae (15) | | | | | | | | | +--Marinactinospora sp. CXB654 (1) | | | | | | | | | +--Haloactinospora alba (1) | | | | | | | | | +--Nocardiopsis kunsanensis (1) | | | | | | | | | +--Nocardiopsis metallicus (12) | | | | | | | +--Streptosporangiaceae (6) | | | | | | | +--Nonomuraea polychroma (5) | | | | | | | +--Acrocarpospora corrugata (1) | | | | | +--Micrococcineae (4) | | | | | | | +--Micrococcaceae (3) | | | | | | | | | +--Arthrobacter psychrolactophilus (1) | | | | | | | | | +--Arthrobacter pigmenti (2) | | | | | | | +--Microbacteriaceae (1) | | | | | | | +--Leucobacter sp. K-540B (1) | | | | | +--Frankineae (1) | | | | | +--Frankiaceae (1) | | | | | +--Frankia sp. CcI3 (1) | | | +--Bdellovibrionota (2) | | | | | +--Oligoflexia (2) | | | | | +--Oligoflexales (2) | | | | | +--Oligoflexaceae (2) | | | | | +--Oligoflexus (2) | | | | | +--Oligoflexus sp. (2) | | | +--Proteobacteria (396) | | | | | +--Olavius sp. associated proteobacterium Delta 1 (1) | | | | | +--Alphaproteobacteria (18) | | | | | | | +--Rhizobiales (11) | | | | | | | | | +--Brucellaceae (5) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (5) | | | | | | | | | +--Rhizobiaceae (4) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (1) | | | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (3) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (1) | | | | | | | | | | | +--Sinorhizobium fredii NGR234 (2) | | | | | | | | | +--Phyllobacteriaceae (1) | | | | | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | | | +--Bradyrhizobiaceae (1) | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (1) | | | | | | | +--Rhodospirillales (5) | | | | | | | | | +--Acetobacteraceae (1) | | | | | | | | | | | +--Rhodopila globiformis (1) | | | | | | | | | +--Rhodospirillaceae bacterium Ia16 (1) | | | | | | | | | +--Rhodospirillaceae (3) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | | | +--Rhodospirillum oryzae (1) | | | | | | | | | +--Roseospira goensis (1) | | | | | | | +--Sphingomonadales (2) | | | | | | | +--Sphingomonadaceae (2) | | | | | | | +--Novosphingobium sp. AP12 (1) | | | | | | | +--Sphingopyxis sp. BZ30 (1) | | | | | +--Deltaproteobacteria (73) | | | | | | | +--Myxococcales (1) | | | | | | | | | +--Enhygromyxa salina (1) | | | | | | | +--Desulfovibrionales (6) | | | | | | | | | +--Desulfohalobiaceae (6) | | | | | | | | | +--Desulfohalobium retbaense DSM 5692 (6) | | | | | | | +--Desulfuromonadales (25) | | | | | | | | | +--Desulfuromonadaceae (1) | | | | | | | | | | | +--Desulfuromonas acetexigens (1) | | | | | | | | | +--Pelobacteraceae (4) | | | | | | | | | | | +--Pelobacter carbinolicus DSM 2380 (4) | | | | | | | | | +--Geobacteraceae (20) | | | | | | | | | +--Geobacter uraniireducens Rf4 (10) | | | | | | | | | +--Geobacter sp. FRC-32 (1) | | | | | | | | | +--Geobacter sulfurreducens PCA (2) | | | | | | | | | +--Geobacter metallireducens GS-15 (1) | | | | | | | | | +--Geobacter pelophilus (6) | | | | | | | +--Desulfobacterales (37) | | | | | | | | | +--Desulfobulbaceae (1) | | | | | | | | | | | +--Desulfurivibrio alkaliphilus AHT2 (1) | | | | | | | | | +--Desulfobacteraceae (36) | | | | | | | | | +--Desulfobacter latus (4) | | | | | | | | | +--Desulfobacula toluolica Tol2 (24) | | | | | | | | | +--Desulfoluna spongiiphila (4) | | | | | | | | | +--Desulfobacter postgatei 2ac9 (4) | | | | | | | +--Spirobacillus cienkowskii (1) | | | | | | | +--Syntrophobacterales (3) | | | | | | | +--Syntrophobacteraceae (2) | | | | | | | | | +--Syntrophobacter fumaroxidans MPOB (1) | | | | | | | | | +--Desulforhabdus amnigena (1) | | | | | | | +--Syntrophaceae (1) | | | | | | | +--Syntrophus gentianae (1) | | | | | +--delta/epsilonsubdivisions (35) | | | | | | | +--Deltaproteobacteria (35) | | | | | | | +--Desulfovibrionales (4) | | | | | | | | | +--Desulfovibrionaceae (4) | | | | | | | | | +--Desulfovibrio sp. An276 (4) | | | | | | | +--Myxococcales (1) | | | | | | | | | +--Cystobacterineae (1) | | | | | | | | | +--Vulgatibacteraceae (1) | | | | | | | | | +--Vulgatibacter incomptus (1) | | | | | | | +--Desulfuromonadales (15) | | | | | | | | | +--Desulfuromonadaceae (15) | | | | | | | | | +--Malonomonas (1) | | | | | | | | | | | +--Malonomonas rubra DSM 5091 (1) | | | | | | | | | +--Desulfuromonas sp. DDH964 (14) | | | | | | | +--Desulfobacterales (7) | | | | | | | | | +--Desulfobulbaceae (3) | | | | | | | | | | | +--Desulfobulbus sp. Tol-SR (1) | | | | | | | | | | | +--Desulfocapsa (2) | | | | | | | | | | | +--Desulfocapsa sulfexigens DSM 10523 (2) | | | | | | | | | +--Desulfobacteraceae (4) | | | | | | | | | +--Desulfotignum (1) | | | | | | | | | | | +--Desulfotignum phosphitoxidans DSM 13687 (1) | | | | | | | | | +--Desulfococcus (1) | | | | | | | | | | | +--Desulfococcus multivorans DSM 2059 (1) | | | | | | | | | +--Desulfobacterium (2) | | | | | | | | | +--Desulfobacterium vacuolatum DSM 3385 (2) | | | | | | | +--unclassifiedDeltaproteobacteria (5) | | | | | | | | | +--Deltaproteobacteria bacterium (3) | | | | | | | | | +--Dissulfuribacter thermophilus (2) | | | | | | | +--Syntrophobacterales (3) | | | | | | | +--Syntrophaceae (3) | | | | | | | +--Smithella sp. F21 (1) | | | | | | | +--Smithella sp. SCADC (2) | | | | | +--delta proteobacterium PL12 (4) | | | | | +--Proteobacteria bacterium CAG:139 (1) | | | | | +--gamma proteobacterium NH6-24 (1) | | | | | +--Bathymodiolus platifrons methanotrophic gill symbiont (2) | | | | | +--Gammaproteobacteria (187) | | | | | | | +--Solimonas sp. NAA16 (1) | | | | | | | +--unclassifiedGammaproteobacteria (1) | | | | | | | | | +--sulfur-oxidizingsymbionts (1) | | | | | | | | | +--Candidatus Thiodiazotropha endolucinida (1) | | | | | | | +--Enterobacterales (2) | | | | | | | | | +--Yersiniaceae (1) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | +--Enterobacteriaceae (1) | | | | | | | | | +--Klebsiella michiganensis (1) | | | | | | | +--Aeromonadales (1) | | | | | | | | | +--Succinivibrionaceae (1) | | | | | | | | | +--Succinatimonas hippei YIT 12066 (1) | | | | | | | +--Methylococcales (8) | | | | | | | | | +--Crenotrichaceae (2) | | | | | | | | | | | +--Crenothrix polyspora (2) | | | | | | | | | +--Methylococcaceae (6) | | | | | | | | | +--Methylomonas methanica MC09 (1) | | | | | | | | | +--Methylomicrobium album BG8 (2) | | | | | | | | | +--Methyloprofundus sedimenti (3) | | | | | | | +--Alteromonadales (24) | | | | | | | | | +--Colwelliaceae (5) | | | | | | | | | | | +--Thalassomonas actiniarum (1) | | | | | | | | | | | +--Colwellia sp. MT41 (4) | | | | | | | | | +--Pseudoalteromonadaceae (5) | | | | | | | | | | | +--Pseudoalteromonas citrea (2) | | | | | | | | | | | +--Pseudoalteromonas sp. S4498 (3) | | | | | | | | | +--Shewanellaceae (3) | | | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | | | +--Shewanella fodinae (1) | | | | | | | | | +--Alteromonadaceae (11) | | | | | | | | | +--Marinobacter sp. BSs20148 (1) | | | | | | | | | +--Catenovulum (1) | | | | | | | | | | | +--Catenovulum agarivorans DS-2 (1) | | | | | | | | | +--Marinobacterium nitratireducens (1) | | | | | | | | | +--Glaciecola sp. BSs20135 (1) | | | | | | | | | +--Marinobacter lutaoensis (2) | | | | | | | | | +--Bowmanella sp. UDC354 (3) | | | | | | | | | +--Marinobacter sp. M9B(2010) (2) | | | | | | | +--Vibrionales (29) | | | | | | | | | +--Vibrionaceae (29) | | | | | | | | | +--Photobacterium proteolyticum (2) | | | | | | | | | +--Vibrio navarrensis (2) | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | +--Photobacterium sp. Gung47 (19) | | | | | | | | | +--Photobacterium profundum (2) | | | | | | | | | +--Vibrio (2) | | | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | +--Photobacterium lipolyticum (1) | | | | | | | +--Cellvibrionales (1) | | | | | | | | | +--Spongiibacteraceae (1) | | | | | | | | | +--gamma proteobacterium BDW918 (1) | | | | | | | +--Xanthomonadales (1) | | | | | | | | | +--Xanthomonadaceae (1) | | | | | | | | | +--Rhodanobacter sp. MO64 (1) | | | | | | | +--Thiotrichales (2) | | | | | | | | | +--Thiotrichaceae (2) | | | | | | | | | +--Achromatium sp. WMS2 (2) | | | | | | | +--Chromatiales (14) | | | | | | | | | +--Ectothiorhodospiraceae (5) | | | | | | | | | | | +--Ectothiorhodospira sp. B7-7 (2) | | | | | | | | | | | +--Ectothiorhodospira mobilis (1) | | | | | | | | | | | +--Nitrococcus mobilis Nb-231 (2) | | | | | | | | | +--Chromatiaceae (9) | | | | | | | | | +--Thiocapsa imhoffii (1) | | | | | | | | | +--Pararheinheimera mesophila (1) | | | | | | | | | +--Allochromatium vinosum DSM 180 (2) | | | | | | | | | +--Thiorhodococcus minor (1) | | | | | | | | | +--Thioflavicoccus (2) | | | | | | | | | | | +--Thioflavicoccus mobilis 8321 (2) | | | | | | | | | +--Thiocapsa marina 5811 (1) | | | | | | | | | +--Nitrosococcus halophilus Nc4 (1) | | | | | | | +--Enterobacteriales (16) | | | | | | | | | +--Enterobacteriaceae (16) | | | | | | | | | +--Serratia fonticola (4) | | | | | | | | | +--Serratia sp. ATCC 39006 (2) | | | | | | | | | +--Escherichia coli S88 (1) | | | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | | | +--Xenorhabdus koppenhoeferi (1) | | | | | | | | | +--Escherichia coli APEC O1 (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (6) | | | | | | | +--Oceanospirillales (63) | | | | | | | | | +--Oleiphilaceae (2) | | | | | | | | | | | +--Oleiphilus messinensis (2) | | | | | | | | | +--Hahellaceae (44) | | | | | | | | | | | +--Endozoicomonas numazuensis (24) | | | | | | | | | | | +--Hahella chejuensis KCTC 2396 (6) | | | | | | | | | | | +--Endozoicomonas montiporae (14) | | | | | | | | | +--Saccharospirillaceae (1) | | | | | | | | | | | +--Gynuella (1) | | | | | | | | | | | +--Gynuella sunshinyii YC6258 (1) | | | | | | | | | +--Halomonadaceae (8) | | | | | | | | | | | +--Halomonas halmophila (1) | | | | | | | | | | | +--Halomonas sp. 1513 (2) | | | | | | | | | | | +--Halomonas cerina (1) | | | | | | | | | | | +--Halomonas chromatireducens (3) | | | | | | | | | | | +--Modicisalibacter sp. YIM 90637 (1) | | | | | | | | | +--Oceanospirillaceae (8) | | | | | | | | | +--Oleispira (4) | | | | | | | | | | | +--Oleispira antarctica RB-8 (4) | | | | | | | | | +--Osedax symbiont Rs1 (2) | | | | | | | | | +--Marinobacterium sp. ST58-10 (2) | | | | | | | +--Pseudomonadales (22) | | | | | | | | | +--Pseudomonadaceae (22) | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (2) | | | | | | | | | +--Pseudomonas japonica (2) | | | | | | | | | +--Rugamonas rubra (1) | | | | | | | | | +--Pseudomonas fluorescens HK44 (8) | | | | | | | | | +--Pseudomonas putida KT2440 (8) | | | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | | | +--Thiohalomonas denitrificans (2) | | | | | +--Magnetococcus sp. MC-1 (4) | | | | | +--Betaproteobacteria (67) | | | | | | | +--unclassifiedBetaproteobacteria (5) | | | | | | | | | +--Betaproteobacteria bacterium MOLA814 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-12 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | | | +--Candidatus Accumulibacter sp. SK-11 (2) | | | | | | | +--Burkholderiales (45) | | | | | | | | | +--Alcaligenaceae (9) | | | | | | | | | | | +--Pusillimonas sp. MJ07 (1) | | | | | | | | | | | +--Pusillimonas noertemannii (1) | | | | | | | | | | | +--Advenella (7) | | | | | | | | | | | +--Advenella mimigardefordensis DPN7 (7) | | | | | | | | | +--Tepidicella xavieri (1) | | | | | | | | | +--Burkholderiaceae (15) | | | | | | | | | | | +--Burkholderia graminis C4D1M (3) | | | | | | | | | | | +--Burkholderia xenovorans LB400 (3) | | | | | | | | | | | +--Burkholderia sp. ATSB16 (5) | | | | | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | | | | | +--Burkholderia sp. NKMU-JPY345 (1) | | | | | | | | | +--Oxalobacteraceae (1) | | | | | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | | | | | +--unclassifiedBurkholderiales (1) | | | | | | | | | | | +--BurkholderialesGeneraincertaesedis (1) | | | | | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | | | +--Sutterellaceae (6) | | | | | | | | | | | +--Sutterella (6) | | | | | | | | | | | +--Sutterella wadsworthensis HGA0223 (2) | | | | | | | | | | | +--Sutterella sp. CAG:521 (2) | | | | | | | | | | | +--Sutterella wadsworthensis 2_1_59BFAA (2) | | | | | | | | | +--Comamonadaceae (12) | | | | | | | | | +--Limnohabitans sp. T6-5 (1) | | | | | | | | | +--Pelomonas saccharophila (2) | | | | | | | | | +--CandidatusSymbiobacter (1) | | | | | | | | | | | +--Candidatus Symbiobacter mobilis CR (1) | | | | | | | | | +--Polaromonas sp. JS666 (2) | | | | | | | | | +--Rhodoferax (3) | | | | | | | | | | | +--Rhodoferax antarcticus ANT.BR (3) | | | | | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | | | | | +--Variovorax paradoxus (2) | | | | | | | +--Rhodocyclales (6) | | | | | | | | | +--Rhodocyclaceae (6) | | | | | | | | | +--Thauera sp. 27 (1) | | | | | | | | | +--Azoarcus sp. KH32C (1) | | | | | | | | | +--Candidatus Propionivibrio aalborgensis (1) | | | | | | | | | +--Denitratisoma oestradiolicum (2) | | | | | | | | | +--Azoarcus sp. NSC3 (1) | | | | | | | +--Neisseriales (9) | | | | | | | | | +--Neisseriaceae (9) | | | | | | | | | +--Vitreoscilla filiformis (9) | | | | | | | +--Nitrosomonadales (2) | | | | | | | +--Nitrosomonadaceae (2) | | | | | | | +--Nitrosomonas europaea ATCC 19718 (2) | | | | | +--gamma proteobacterium BW-2 (3) | | | +--unclassifiedBacteria (3) | | | | | +--bacterium F16 (3) | | | +--Thermotogota (1) | | | | | +--Thermotogae (1) | | | | | +--Petrotogales (1) | | | | | +--Petrotogaceae (1) | | | | | +--Tepiditoga spiralis (1) | | | +--Planctomycetes (6) | | | | | +--Planctomycetacia (6) | | | | | +--Planctomycetales (6) | | | | | +--Planctomycetaceae (6) | | | | | +--Planctomyces sp. UC8 (1) | | | | | +--Rhodopirellula baltica SH 1 (2) | | | | | +--Gemmata obscuriglobus (3) | | | +--Spirochaetes (4) | | | | | +--Spirochaetia (2) | | | | | | | +--Spirochaetales (2) | | | | | | | +--Spirochaetaceae (2) | | | | | | | +--Spirochaeta (1) | | | | | | | | | +--Spirochaeta africana DSM 8902 (1) | | | | | | | +--Marispirochaeta aestuarii (1) | | | | | +--Spirochaetales (2) | | | | | +--Spirochaetaceae (2) | | | | | +--Spirochaeta sp. Buddy (1) | | | | | +--Spirochaeta isovalerica (1) | | | +--Firmicutes (546) | | | | | +--Clostridia (244) | | | | | | | +--Thermoanaerobacterales (28) | | | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (3) | | | | | | | | | | | +--Thermovenabulum sp. R270 (1) | | | | | | | | | | | +--Thermoanaerobacterium thermosaccharolyticum DSM 571 (2) | | | | | | | | | +--Thermoanaerobacteraceae (25) | | | | | | | | | +--Moorellagroup (5) | | | | | | | | | | | +--Ammonifex degensii KC4 (3) | | | | | | | | | | | +--Moorella sp. 64_FGQ (2) | | | | | | | | | +--Fervidicola ferrireducens (4) | | | | | | | | | +--Thermoanaerobacter pseudethanolicus ATCC 33223 (16) | | | | | | | +--Clostridiales bacterium APP2 (1) | | | | | | | +--Halanaerobiales (4) | | | | | | | | | +--Halanaerobiaceae (4) | | | | | | | | | +--Halanaerobium hydrogeniformans (4) | | | | | | | +--Natranaerobiales (36) | | | | | | | | | +--Natranaerobiaceae (36) | | | | | | | | | +--Natranaerobius trueperi (21) | | | | | | | | | +--Natranaerobius thermophilus JW/NM-WN-LF (15) | | | | | | | +--Clostridiales (175) | | | | | | | +--Heliobacteriaceae (20) | | | | | | | | | +--Heliobacterium modesticaldum Ice1 (18) | | | | | | | | | +--Heliophilum fasciatum (1) | | | | | | | | | +--Heliobacillus mobilis (1) | | | | | | | +--Eubacteriaceae bacterium WN037 (1) | | | | | | | +--Clostridiaceae bacterium SN021 (2) | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | +--Peptostreptococcus stomatis DSM 17678 (1) | | | | | | | +--Eubacteriaceae (5) | | | | | | | | | +--Acetobacterium paludosum (1) | | | | | | | | | +--Eubacterium oxidoreducens (1) | | | | | | | | | +--Eubacterium uniforme (1) | | | | | | | | | +--Alkalibaculum bacchi (1) | | | | | | | | | +--Eubacterium sp. AS15b (1) | | | | | | | +--Lachnospiraceae (18) | | | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (2) | | | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | | | +--Coprococcus catus (1) | | | | | | | | | +--Catonella morbi ATCC 51271 (3) | | | | | | | | | +--Roseburia inulinivorans (4) | | | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | | | +--Coprococcus eutactus (1) | | | | | | | | | +--Oribacterium sp. ACB1 (3) | | | | | | | | | +--Butyrivibrio fibrisolvens (1) | | | | | | | | | +--Lachnospira multipara (1) | | | | | | | +--ClostridialesFamilyXVIII.IncertaeSedis (25) | | | | | | | | | +--Symbiobacterium thermophilum IAM 14863 (25) | | | | | | | +--Blautia luti (2) | | | | | | | +--Ruminococcaceae (2) | | | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (1) | | | | | | | | | +--Acetivibrio ethanolgignens (1) | | | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (1) | | | | | | | +--ClostridialesFamilyXI.IncertaeSedis (5) | | | | | | | | | +--Peptoniphilus ivorii (1) | | | | | | | | | +--Anaerococcus lactolyticus ATCC 51172 (1) | | | | | | | | | +--Peptoniphilus duerdenii ATCC BAA-1640 (1) | | | | | | | | | +--Sporanaerobacter sp. C5BEL (2) | | | | | | | +--Proteiniborus ethanoligenes (4) | | | | | | | +--Lachnospiraceae bacterium A2 (1) | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | +--Mogibacterium sp. CM50 (1) | | | | | | | +--Lachnospiraceae bacterium 1_4_56FAA (1) | | | | | | | +--Clostridiaceae (60) | | | | | | | | | +--Thermotalea metallivorans (2) | | | | | | | | | +--Clostridium saccharolyticum WM1 (1) | | | | | | | | | +--Clostridium pasteurianum BC1 (1) | | | | | | | | | +--Clostridium ljungdahlii (1) | | | | | | | | | +--Clostridium tetani E88 (1) | | | | | | | | | +--Clostridium thermoalcaliphilum (1) | | | | | | | | | +--Clostridium sp. 232.1 (1) | | | | | | | | | +--Clostridium bolteae ATCC BAA-613 (3) | | | | | | | | | +--Clostridium sp. 7_2_43FAA (1) | | | | | | | | | +--Clostridium leptum (1) | | | | | | | | | +--Clostridium aciditolerans (1) | | | | | | | | | +--Clostridium hathewayi (1) | | | | | | | | | +--Clostridium saccharoperbutylacetonicum ATCC 27021 (5) | | | | | | | | | +--Clostridium lavalense (1) | | | | | | | | | +--Clostridium tetanomorphum (2) | | | | | | | | | +--Clostridium sulfidigenes (1) | | | | | | | | | +--Clostridium vincentii (1) | | | | | | | | | +--Clostridium estertheticum subsp. estertheticum (2) | | | | | | | | | +--Clostridium acetobutylicum ATCC 824 (1) | | | | | | | | | +--Clostridium hungatei (1) | | | | | | | | | +--Clostridium neonatale (1) | | | | | | | | | +--Clostridium aminophilum (1) | | | | | | | | | +--Clostridium sp. DL-VIII (1) | | | | | | | | | +--Clostridium puniceum (3) | | | | | | | | | +--Clostridium paraputrificum (1) | | | | | | | | | +--Clostridium polysaccharolyticum (1) | | | | | | | | | +--Clostridium halophilum (1) | | | | | | | | | +--Clostridium sp. SY8519 (2) | | | | | | | | | +--Thermohalobacter berrensis (3) | | | | | | | | | +--Clostridium tagluense (3) | | | | | | | | | +--Clostridium putrefaciens (1) | | | | | | | | | +--Anaerobacter polyendosporus (1) | | | | | | | | | +--Clostridium symbiosum WAL-14163 (11) | | | | | | | | | +--Caloramator mitchellensis (1) | | | | | | | +--Lachnospiraceae bacterium 3-1 (2) | | | | | | | +--Syntrophomonadaceae (4) | | | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | | | | | +--Syntrophomonas wolfei subsp. wolfei str. Goettingen (3) | | | | | | | +--Peptococcaceae (17) | | | | | | | | | +--Thermincola potens JR (1) | | | | | | | | | +--Syntrophobotulus glycolicus DSM 8271 (1) | | | | | | | | | +--Sporotomaculum syntrophicum (1) | | | | | | | | | +--Desulfosporosinus orientis DSM 765 (3) | | | | | | | | | +--Desulfitobacterium hafniense Y51 (3) | | | | | | | | | +--Desulfotomaculum gibsoniae DSM 7213 (1) | | | | | | | | | +--Desulfosporosinus youngiae DSM 17734 (2) | | | | | | | | | +--Desulfitobacterium metallireducens DSM 15288 (4) | | | | | | | | | +--Pelotomaculum schinkii (1) | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (2) | | | | | | | | | +--Sulfobacillus acidophilus DSM 10332 (2) | | | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (1) | | | | | +--Lactobacillales (41) | | | | | | | +--Streptococcaceae (7) | | | | | | | | | +--Streptococcus pneumoniae R6 (1) | | | | | | | | | +--Streptococcus pneumoniae TIGR4 (2) | | | | | | | | | +--Streptococcus agalactiae 2603V/R (1) | | | | | | | | | +--Streptococcus sp. ERD01G (1) | | | | | | | | | +--Streptococcus pneumoniae D39 (1) | | | | | | | | | +--Streptococcus pasteurianus ATCC 43144 (1) | | | | | | | +--Carnobacteriaceae (13) | | | | | | | | | +--Carnobacterium sp. LMG 26642 (8) | | | | | | | | | +--Alkalibacterium pelagium (3) | | | | | | | | | +--Alkalibacterium kapii (1) | | | | | | | | | +--Desemzia incerta (1) | | | | | | | +--Enterococcaceae (2) | | | | | | | | | +--Enterococcus aquimarinus (1) | | | | | | | | | +--Enterococcus sp. HAMBI 3055 (1) | | | | | | | +--Lactobacillaceae (19) | | | | | | | +--Lactobacillus pobuzihii (2) | | | | | | | +--Lactobacillus casei ATCC 334 (1) | | | | | | | +--Lactobacillus plantarum WCFS1 (1) | | | | | | | +--Lactobacillus brevis ATCC 367 (1) | | | | | | | +--Lactobacillus salivarius UCC118 (1) | | | | | | | +--Lactobacillus reuteri DSM 20016 (11) | | | | | | | +--Lactobacillus ingluviei (2) | | | | | +--Negativicutes (13) | | | | | | | +--Selenomonadales (13) | | | | | | | +--Acidaminococcaceae (1) | | | | | | | | | +--Acidaminococcus intestini RyC-MR95 (1) | | | | | | | +--Veillonellaceae (12) | | | | | | | +--Anaerovibrio lipolyticus (1) | | | | | | | +--Dialister micraerophilus DSM 19965 (1) | | | | | | | +--Thermosinus carboxydivorans Nor1 (2) | | | | | | | +--Sporomusa malonica (1) | | | | | | | +--Selenomonas sputigena ATCC 35185 (1) | | | | | | | +--Megasphaera elsdenii DSM 20460 (5) | | | | | | | +--Pectinatus sp. TY (1) | | | | | +--Bacillales (220) | | | | | | | +--Paenibacillaceae (65) | | | | | | | | | +--Paenibacillus cellulosilyticus (1) | | | | | | | | | +--Paenibacillus naphthalenovorans (1) | | | | | | | | | +--Brevibacillus sp. WF146 (15) | | | | | | | | | +--Paenibacillus stellifer (8) | | | | | | | | | +--Paenibacillus macerans (4) | | | | | | | | | +--Brevibacillus brevis NBRC 100599 (6) | | | | | | | | | +--Paenibacillus sp. 598K (1) | | | | | | | | | +--Paenibacillus sp. oral taxon 786 str. D14 (2) | | | | | | | | | +--Paenibacillus wynnii (1) | | | | | | | | | +--Paenibacillus graminis (4) | | | | | | | | | +--Thermobacillus composti KWC4 (11) | | | | | | | | | +--Brevibacillus sp. CJ71 (1) | | | | | | | | | +--Paenibacillus pectinilyticus (1) | | | | | | | | | +--Cohnella luojiensis (1) | | | | | | | | | +--Paenibacillus donghaensis (6) | | | | | | | | | +--Cohnella thailandensis (1) | | | | | | | | | +--Paenibacillus phyllosphaerae (1) | | | | | | | +--Planococcaceae (7) | | | | | | | | | +--Filibacter limicola (4) | | | | | | | | | +--Ureibacillus terrenus (2) | | | | | | | | | +--Sporosarcina luteola (1) | | | | | | | +--Alicyclobacillaceae (9) | | | | | | | | | +--Alicyclobacillus macrosporangiidus (3) | | | | | | | | | +--Alicyclobacillus ferrooxydans (4) | | | | | | | | | +--Alicyclobacillus hesperidum (1) | | | | | | | | | +--Alicyclobacillus sp. 'Sueoka' (1) | | | | | | | +--Bacillaceae (136) | | | | | | | | | +--Oceanobacillus iheyensis HTE831 (6) | | | | | | | | | +--Oceanobacillus sp. A21 (1) | | | | | | | | | +--Bacillus asahii (1) | | | | | | | | | +--Bacillus shackletonii (18) | | | | | | | | | +--Oceanobacillus profundus (1) | | | | | | | | | +--Geobacillus kaustophilus HTA426 (2) | | | | | | | | | +--Virgibacillus pantothenticus (3) | | | | | | | | | +--Piscibacillus sp. HS224 (1) | | | | | | | | | +--Bacillus sporothermodurans (1) | | | | | | | | | +--Bacillus sp. B48(2010) (1) | | | | | | | | | +--Bacillus krulwichiae (3) | | | | | | | | | +--Bacillus nealsonii (1) | | | | | | | | | +--Tenuibacillus multivorans (1) | | | | | | | | | +--Gracilibacillus dipsosauri (2) | | | | | | | | | +--Bacillus arseniciselenatis (1) | | | | | | | | | +--Bacillus cohnii (4) | | | | | | | | | +--Bacillus galactosidilyticus (12) | | | | | | | | | +--Bacillus pseudofirmus OF4 (2) | | | | | | | | | +--Bacillus vietnamensis (1) | | | | | | | | | +--Bacillus lentus (1) | | | | | | | | | +--Bacillus thermoamylovorans (1) | | | | | | | | | +--Bacillus methanolicus MGA3 (15) | | | | | | | | | +--Paraliobacillus quinghaiensis (1) | | | | | | | | | +--Bacillus muralis (1) | | | | | | | | | +--Salsuginibacillus halophilus (1) | | | | | | | | | +--Oceanobacillus oncorhynchi (7) | | | | | | | | | +--Bacillus qingdaonensis (1) | | | | | | | | | +--Bacillus arsenicus (1) | | | | | | | | | +--Aeribacillus pallidus (2) | | | | | | | | | +--Calditerricola satsumensis (2) | | | | | | | | | +--Bacillus subterraneus (1) | | | | | | | | | +--Bacillus neizhouensis (3) | | | | | | | | | +--Lentibacillus kapialis (1) | | | | | | | | | +--Bacillus ginsengihumi (1) | | | | | | | | | +--Bacillus cellulosilyticus DSM 2522 (1) | | | | | | | | | +--Natronobacillus azotifigens (1) | | | | | | | | | +--Gracilibacillus ureilyticus (1) | | | | | | | | | +--Bacillus sp. X5B(2010) (2) | | | | | | | | | +--Bacillus circulans (3) | | | | | | | | | +--Alkalibacillus haloalkaliphilus (1) | | | | | | | | | +--Ornithinibacillus sp. G8B(2010) (1) | | | | | | | | | +--Cerasibacillus quisquiliarum (1) | | | | | | | | | +--Bacillus halodurans C-125 (6) | | | | | | | | | +--Virgibacillus salarius (2) | | | | | | | | | +--Anoxybacillus flavithermus (1) | | | | | | | | | +--Halolactibacillus alkaliphilus (2) | | | | | | | | | +--Anoxybacillus amylolyticus (7) | | | | | | | | | +--Bacillus salarius (2) | | | | | | | | | +--Bacillus sp. P4B(2010) (2) | | | | | | | | | +--Virgibacillus necropolis (2) | | | | | | | +--Sporolactobacillaceae (3) | | | | | | | +--Sporolactobacillus inulinus (1) | | | | | | | +--Scopulibacillus darangshiensis (1) | | | | | | | +--Sporolactobacillus inulinus CASD (1) | | | | | +--Erysipelotrichi (28) | | | | | +--Erysipelotrichales (28) | | | | | +--Clostridium ramosum DSM 1402 (1) | | | | | +--Erysipelotrichaceae (2) | | | | | | | +--Holdemania filiformis (1) | | | | | | | +--Solobacterium moorei F0204 (1) | | | | | +--Clostridium spiroforme DSM 1552 (24) | | | | | +--Clostridium cocleatum (1) | | | +--Synergistetes (5) | | | | | +--Synergistia (5) | | | | | +--Synergistales (5) | | | | | +--Synergistaceae (5) | | | | | +--Cloacibacillus (5) | | | | | +--Cloacibacillus evryensis DSM 19522 (5) | | | +--Thermodesulfobacteriota (15) | | | | | +--Desulfobacteria (8) | | | | | | | +--Desulfobacterales (8) | | | | | | | +--Desulfosarcinaceae (3) | | | | | | | | | +--Desulfosarcina (2) | | | | | | | | | | | +--Desulfosarcina ovata subsp. ovata (2) | | | | | | | | | +--Desulfosarcina widdelii (1) | | | | | | | +--Desulfobacteraceae (5) | | | | | | | +--Desulfobacteraceae bacterium SEEP-SAG9 (2) | | | | | | | +--Desulfobacteraceae bacterium SEEP-SAG10 (1) | | | | | | | +--Desulfobacteraceae bacterium (2) | | | | | +--Desulfobulbia (3) | | | | | | | +--Desulfobulbales (3) | | | | | | | +--Desulfocapsaceae (1) | | | | | | | | | +--Desulforhopalus (1) | | | | | | | | | +--Desulforhopalus sp. IMCC35007 (1) | | | | | | | +--Desulfobulbaceae (2) | | | | | | | +--Desulfolithobacter dissulfuricans (1) | | | | | | | +--Desulfomarina profundi (1) | | | | | +--Desulfuromonadia (4) | | | | | +--Geobacterales (4) | | | | | +--Geobacteraceae (4) | | | | | +--Geobacteraceae bacterium (2) | | | | | +--Geobacter (1) | | | | | | | +--Geobacter sp. DSM 9736 (1) | | | | | +--Pelovirga terrestris (1) | | | +--Balneolaeota (1) | | | | | +--Balneolia (1) | | | | | +--Balneolales (1) | | | | | +--Balneolaceae (1) | | | | | +--Aliifodinibius roseus (1) | | | +--Verrucomicrobia (6) | | | | | +--Opitutae (1) | | | | | | | +--Puniceicoccales (1) | | | | | | | +--Puniceicoccaceae (1) | | | | | | | +--Pelagicoccus mobilis (1) | | | | | +--Spartobacteria (3) | | | | | | | +--Chthoniobacter flavus Ellin428 (3) | | | | | +--Verrucomicrobiae (2) | | | | | +--Verrucomicrobiales (2) | | | | | +--Verrucomicrobiaceae (2) | | | | | +--Haloferula rosea (2) | | | +--bacterium D16-59 (1) | | | +--Terrabacteriagroup (920) | | | | | +--Actinobacteria (4) | | | | | | | +--Actinobacteria (4) | | | | | | | +--Corynebacteriales (2) | | | | | | | | | +--Corynebacteriaceae (1) | | | | | | | | | | | +--Corynebacterium (1) | | | | | | | | | | | +--Corynebacterium freneyi DNF00450 (1) | | | | | | | | | +--Gordoniaceae (1) | | | | | | | | | +--Gordonia (1) | | | | | | | | | +--Gordonia hirsuta DSM 44140 = NBRC 16056 (1) | | | | | | | +--Micrococcales (2) | | | | | | | +--Micrococcaceae (2) | | | | | | | +--Arthrobacter (1) | | | | | | | | | +--Arthrobacter crystallopoietes BAB-32 (1) | | | | | | | +--Paeniglutamicibacter (1) | | | | | | | +--Paeniglutamicibacter gangotriensis Lz1y (1) | | | | | +--Deinococcota (1) | | | | | | | +--Deinococci (1) | | | | | | | +--Trueperales (1) | | | | | | | +--Trueperaceae (1) | | | | | | | +--Truepera (1) | | | | | | | +--Truepera sp. (1) | | | | | +--Cyanobacteriota/Melainabacteriagroup (15) | | | | | | | +--Cyanobacteriota (15) | | | | | | | +--Cyanophyceae (13) | | | | | | | | | +--Leptolyngbyales (7) | | | | | | | | | | | +--Leptolyngbyaceae (7) | | | | | | | | | | | +--Stenomitos (2) | | | | | | | | | | | | | +--Stenomitos frigidus ULC18 (2) | | | | | | | | | | | +--Leptolyngbyagroup (4) | | | | | | | | | | | | | +--Leptolyngbya (4) | | | | | | | | | | | | | +--Leptolyngbya sp. FACHB-321 (1) | | | | | | | | | | | | | +--Leptolyngbya sp. Cla-17 (2) | | | | | | | | | | | | | +--Leptolyngbya cf. ectocarpi LEGE 11479 (1) | | | | | | | | | | | +--Phormidesmis (1) | | | | | | | | | | | +--Phormidesmis priestleyi ULC007 (1) | | | | | | | | | +--Nodosilineales (2) | | | | | | | | | | | +--Nodosilineaceae (2) | | | | | | | | | | | +--Nodosilinea (2) | | | | | | | | | | | +--Nodosilinea sp. LEGE 07088 (2) | | | | | | | | | +--Oculatellales (3) | | | | | | | | | | | +--Oculatellaceae (3) | | | | | | | | | | | +--Oculatella (3) | | | | | | | | | | | +--Oculatella sp. FACHB-28 (1) | | | | | | | | | | | +--Oculatella sp. LEGE 06141 (2) | | | | | | | | | +--Nostocales (1) | | | | | | | | | +--Calotrichaceae (1) | | | | | | | | | +--Calothrix (1) | | | | | | | | | +--Calothrix sp. NIES-4101 (1) | | | | | | | +--Cyanobacteria bacterium FACHB-502 (2) | | | | | +--Chloroflexota (1) | | | | | | | +--Thermoflexia (1) | | | | | | | +--Thermoflexales (1) | | | | | | | +--Thermoflexales bacterium (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (3) | | | | | | | +--Cyanobacteria (3) | | | | | | | +--Synechococcales (3) | | | | | | | +--Leptolyngbyaceae (3) | | | | | | | +--Halomicronema (1) | | | | | | | | | +--Halomicronema hongdechloris C2206 (1) | | | | | | | +--Leptolyngbya sp. 'hensonii' (2) | | | | | +--Actinomycetota (24) | | | | | | | +--Acidimicrobiia (1) | | | | | | | | | +--Acidimicrobiia bacterium (1) | | | | | | | +--Actinomycetes (23) | | | | | | | +--Geodermatophilales (1) | | | | | | | | | +--Geodermatophilaceae (1) | | | | | | | | | +--Geodermatophilus (1) | | | | | | | | | +--Geodermatophilus sp. DF01_2 (1) | | | | | | | +--Mycobacteriales (1) | | | | | | | | | +--Gordoniaceae (1) | | | | | | | | | +--Gordonia asplenii (1) | | | | | | | +--Kitasatosporales (15) | | | | | | | | | +--Streptomycetaceae (15) | | | | | | | | | +--Streptomyces qinzhouensis (1) | | | | | | | | | +--Streptomyces klenkii (1) | | | | | | | | | +--Streptomyces luteolifulvus (1) | | | | | | | | | +--Streptomyces (12) | | | | | | | | | +--Streptomyces sp. SID10815 (4) | | | | | | | | | +--Streptomyces sp. NA02950 (7) | | | | | | | | | +--Streptomyces sp. TLI_235 (1) | | | | | | | +--Micrococcales (6) | | | | | | | +--Micrococcaceae (5) | | | | | | | | | +--Arthrobacter cavernae (1) | | | | | | | | | +--Paenarthrobacter (1) | | | | | | | | | | | +--Paenarthrobacter sp. YJN-5 (1) | | | | | | | | | +--Glutamicibacter (1) | | | | | | | | | | | +--Glutamicibacter sp. BW77 (1) | | | | | | | | | +--Nesterenkonia sedimenti (1) | | | | | | | | | +--Nesterenkonia alkaliphila (1) | | | | | | | +--Microbacteriaceae (1) | | | | | | | +--Arenivirga flava (1) | | | | | +--Bacillota (456) | | | | | | | +--Firmicutes bacterium AF12-30 (1) | | | | | | | +--Erysipelotrichia (19) | | | | | | | | | +--Erysipelotrichales (19) | | | | | | | | | +--Erysipelotrichaceae (14) | | | | | | | | | | | +--Massilimicrobiota (3) | | | | | | | | | | | | | +--Massilimicrobiota sp. An134 (3) | | | | | | | | | | | +--Erysipelotrichaceae bacterium RD49 (1) | | | | | | | | | | | +--Amedibacterium intestinale (8) | | | | | | | | | | | +--Intestinibaculum porci (1) | | | | | | | | | | | +--Ileibacterium valens (1) | | | | | | | | | +--Coprobacillaceae (5) | | | | | | | | | +--Faecalibacillus faecis (1) | | | | | | | | | +--Longibaculum muris (1) | | | | | | | | | +--Thomasclavelia (3) | | | | | | | | | +--Erysipelatoclostridium sp. An173 (3) | | | | | | | +--Clostridia (162) | | | | | | | | | +--Moorellales (8) | | | | | | | | | | | +--Moorellaceae (6) | | | | | | | | | | | | | +--Thermanaeromonas (6) | | | | | | | | | | | | | +--Thermanaeromonas sp. C210 (6) | | | | | | | | | | | +--Calderihabitantaceae (2) | | | | | | | | | | | +--Calderihabitans maritimus (2) | | | | | | | | | +--Thermoanaerobacterales (6) | | | | | | | | | | | +--Thermoanaerobacteraceae (6) | | | | | | | | | | | +--Thermoanaerobacterium (1) | | | | | | | | | | | | | +--Thermoanaerobacterium sp. RBIITD (1) | | | | | | | | | | | +--Thermodesulfitimonas autotrophica (1) | | | | | | | | | | | +--Gelria (2) | | | | | | | | | | | | | +--Gelria sp. Kuro-4 (2) | | | | | | | | | | | +--Thermoanaerobacteraceae bacterium SP2 (2) | | | | | | | | | +--Peptostreptococcales (8) | | | | | | | | | | | +--Anaerovoracaceae (1) | | | | | | | | | | | | | +--Aminipila luticellarii (1) | | | | | | | | | | | +--Natronincolaceae (4) | | | | | | | | | | | | | +--Alkaliphilus (4) | | | | | | | | | | | | | +--Alkaliphilus sp. B6464 (2) | | | | | | | | | | | | | +--Alkaliphilus sp. (2) | | | | | | | | | | | +--Acidaminobacteraceae (2) | | | | | | | | | | | | | +--Acidaminobacter (2) | | | | | | | | | | | | | +--Acidaminobacter hydrogenoformans DSM 2784 (2) | | | | | | | | | | | +--Peptostreptococcaceae (1) | | | | | | | | | | | +--Peptostreptococcaceae bacterium pGA-8 (1) | | | | | | | | | +--Eubacteriales (89) | | | | | | | | | | | +--Eubacterialesincertaesedis (3) | | | | | | | | | | | | | +--EubacterialesFamilyXII.IncertaeSedis (1) | | | | | | | | | | | | | | | +--Fusibacter (1) | | | | | | | | | | | | | | | +--Fusibacter sp. A1 (1) | | | | | | | | | | | | | +--ClostridialesFamilyXVII.IncertaeSedis (1) | | | | | | | | | | | | | | | +--Sulfobacillus (1) | | | | | | | | | | | | | | | +--Sulfobacillus sp. hq2 (1) | | | | | | | | | | | | | +--EubacterialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | | | | | +--Sinanaerobacter chloroacetimidivorans (1) | | | | | | | | | | | +--Desulfitobacteriaceae (4) | | | | | | | | | | | | | +--Desulfosporosinus (4) | | | | | | | | | | | | | +--Desulfosporosinus sp. HMP52 (3) | | | | | | | | | | | | | +--Desulfosporosinus sp. Sb-LF (1) | | | | | | | | | | | +--Bianqueaceae (1) | | | | | | | | | | | | | +--Bianquea renquensis (1) | | | | | | | | | | | +--Eubacteriaceae (1) | | | | | | | | | | | | | +--Eubacterium (1) | | | | | | | | | | | | | +--Eubacterium sp. AF22-8LB (1) | | | | | | | | | | | +--Proteinivoraceae (1) | | | | | | | | | | | | | +--Alkalicella caledoniensis (1) | | | | | | | | | | | +--Clostridiaceae (63) | | | | | | | | | | | | | +--Clostridiaceae bacterium AF18-31LB (2) | | | | | | | | | | | | | +--Clostridium manihotivorum (25) | | | | | | | | | | | | | +--Clostridium (13) | | | | | | | | | | | | | | | +--Clostridium sp. 'deep sea' (3) | | | | | | | | | | | | | | | +--Clostridium sp. chh4-2 (1) | | | | | | | | | | | | | | | +--Clostridium sp. DSM 8431 (1) | | | | | | | | | | | | | | | +--Clostridium sp. JN-9 (2) | | | | | | | | | | | | | | | +--Clostridium sp. SM-530-WT-3G (3) | | | | | | | | | | | | | | | +--Clostridium sp. CAG:149 (1) | | | | | | | | | | | | | | | +--Clostridium sp. AM33-3 (2) | | | | | | | | | | | | | +--Proteiniclasticum aestuarii (1) | | | | | | | | | | | | | +--Clostridiaceae bacterium 14S0207 (20) | | | | | | | | | | | | | +--Sarcina (1) | | | | | | | | | | | | | | | +--Sarcina sp. DSM 11001 (1) | | | | | | | | | | | | | +--Fonticella tunisiensis (1) | | | | | | | | | | | +--Peptococcaceae (3) | | | | | | | | | | | | | +--Peptococcaceae bacterium (3) | | | | | | | | | | | +--Oscillospiraceae (13) | | | | | | | | | | | +--Acetivibrio saccincola (1) | | | | | | | | | | | +--Ruminococcus difficilis (3) | | | | | | | | | | | +--Ruminococcaceae bacterium YRB3002 (2) | | | | | | | | | | | +--Anaerobacterium chartisolvens (1) | | | | | | | | | | | +--Pseudoflavonifractor (1) | | | | | | | | | | | | | +--Pseudoflavonifractor sp. An176 (1) | | | | | | | | | | | +--Ligaoa zhengdingensis (1) | | | | | | | | | | | +--Ruminococcus (4) | | | | | | | | | | | +--Ruminococcus sp. AF31-8BH (1) | | | | | | | | | | | +--Ruminococcus sp. AM42-11 (3) | | | | | | | | | +--Halanaerobiales (2) | | | | | | | | | | | +--Halarsenatibacteraceae (1) | | | | | | | | | | | | | +--Halonatronomonas betaini (1) | | | | | | | | | | | +--Halanaerobiaceae (1) | | | | | | | | | | | +--Iocasia fonsfrigidae (1) | | | | | | | | | +--Lachnospirales (49) | | | | | | | | | +--Lachnospiraceae (46) | | | | | | | | | | | +--Frisingicoccus caecimuris (1) | | | | | | | | | | | +--Blautia liquoris (3) | | | | | | | | | | | +--Acetitomaculum (1) | | | | | | | | | | | | | +--Acetitomaculum ruminis DSM 5522 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium XBB1006 (2) | | | | | | | | | | | +--Lachnospiraceae bacterium OF09-33XD (1) | | | | | | | | | | | +--Parablautia intestinalis (1) | | | | | | | | | | | +--Lachnospiraceae bacterium G11 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium XPB1003 (2) | | | | | | | | | | | +--Cuneatibacter caecimuris (3) | | | | | | | | | | | +--Oribacterium (1) | | | | | | | | | | | | | +--Oribacterium sp. C9 (1) | | | | | | | | | | | +--Lachnospiraceae bacterium KH1T2 (2) | | | | | | | | | | | +--Anaeromicropila herbilytica (8) | | | | | | | | | | | +--Roseburia (1) | | | | | | | | | | | | | +--Roseburia sp. OF03-24 (1) | | | | | | | | | | | +--Coprococcus (1) | | | | | | | | | | | | | +--Coprococcus sp. AF21-14LB (1) | | | | | | | | | | | +--Acetatifactor muris (1) | | | | | | | | | | | +--Lachnospiraceae bacterium XBB2008 (2) | | | | | | | | | | | +--Lachnospiraceae bacterium C7 (1) | | | | | | | | | | | +--Eisenbergiella massiliensis (1) | | | | | | | | | | | +--Butyrivibrio (4) | | | | | | | | | | | | | +--Butyrivibrio sp. Su6 (2) | | | | | | | | | | | | | +--Butyrivibrio sp. ob235 (2) | | | | | | | | | | | +--Blautia argi (1) | | | | | | | | | | | +--Lachnotalea glycerini (1) | | | | | | | | | | | +--Anaerostipes rhamnosivorans (2) | | | | | | | | | | | +--Sellimonas intestinalis (1) | | | | | | | | | | | +--Mediterraneibacter (1) | | | | | | | | | | | | | +--Mediterraneibacter gnavus (strain CC55_001C) (1) | | | | | | | | | | | +--Blautia (1) | | | | | | | | | | | | | +--Blautia sp. OF03-15BH (1) | | | | | | | | | | | +--Lachnotalea (2) | | | | | | | | | | | +--Lachnotalea sp. AF33-28 (2) | | | | | | | | | +--Vallitaleaceae (3) | | | | | | | | | +--Vallitalea guaymasensis (3) | | | | | | | +--Bacilli (263) | | | | | | | | | +--Lactobacillales (14) | | | | | | | | | | | +--Streptococcaceae (1) | | | | | | | | | | | | | +--Streptococcus hillyeri (1) | | | | | | | | | | | +--Enterococcaceae (8) | | | | | | | | | | | | | +--Vagococcus silagei (2) | | | | | | | | | | | | | +--Vagococcus allomyrinae (2) | | | | | | | | | | | | | +--Tetragenococcus (4) | | | | | | | | | | | | | +--Tetragenococcus halophilus subsp. halophilus (4) | | | | | | | | | | | +--Aerococcaceae (5) | | | | | | | | | | | +--Suicoccus acidiformans (4) | | | | | | | | | | | +--Aerococcus (1) | | | | | | | | | | | +--Aerococcus sp. HMSC10H05 (1) | | | | | | | | | +--Bacillales (249) | | | | | | | | | +--Paenibacillaceae (77) | | | | | | | | | | | +--Cohnella terricola (1) | | | | | | | | | | | +--Cohnella fermenti (2) | | | | | | | | | | | +--Paenibacillus lemnae (1) | | | | | | | | | | | +--Paenibacillus baekrokdamisoli (1) | | | | | | | | | | | +--Paenibacillus sedimenti (1) | | | | | | | | | | | +--Paenibacillus foliorum (1) | | | | | | | | | | | +--Paenibacillus cremeus (2) | | | | | | | | | | | +--Cohnella lupini (1) | | | | | | | | | | | +--Paenibacillus thalictri (1) | | | | | | | | | | | +--Paenibacillus piri (1) | | | | | | | | | | | +--Paenibacillus antri (1) | | | | | | | | | | | +--Xylanibacillus composti (3) | | | | | | | | | | | +--Paenibacillus algicola (1) | | | | | | | | | | | +--Paenibacillus psychroresistens (1) | | | | | | | | | | | +--Cohnella rhizosphaerae (1) | | | | | | | | | | | +--Paenibacillus solani (4) | | | | | | | | | | | +--Cohnella zeiphila (1) | | | | | | | | | | | +--Paenibacillus agri (4) | | | | | | | | | | | +--Paenibacillus (34) | | | | | | | | | | | | | +--Paenibacillus sp. 7541 (1) | | | | | | | | | | | | | +--Paenibacillus sp. yr247 (1) | | | | | | | | | | | | | +--Paenibacillus sp. CAA11 (20) | | | | | | | | | | | | | +--Paenibacillus sp. GSMTC-2017 (1) | | | | | | | | | | | | | +--Paenibacillus sp. J45TS6 (1) | | | | | | | | | | | | | +--Paenibacillus sp. YN15 (1) | | | | | | | | | | | | | +--Paenibacillus sp. N3.4 (3) | | | | | | | | | | | | | +--Paenibacillus sp. OAS669 (4) | | | | | | | | | | | | | +--Paenibacillus sp. KS1 (2) | | | | | | | | | | | +--Cohnella cholangitidis (2) | | | | | | | | | | | +--Cohnella endophytica (2) | | | | | | | | | | | +--Paenibacillus lutimineralis (1) | | | | | | | | | | | +--Cohnella (1) | | | | | | | | | | | | | +--Cohnella sp. CIP 111063 (1) | | | | | | | | | | | +--Cohnella faecalis (1) | | | | | | | | | | | +--Paenibacillus paeoniae (1) | | | | | | | | | | | +--Cohnella herbarum (1) | | | | | | | | | | | +--Cohnella lubricantis (1) | | | | | | | | | | | +--Paenibacillus monticola (1) | | | | | | | | | | | +--Paenibacillus roseus (1) | | | | | | | | | | | +--Paenibacillus sambharensis (1) | | | | | | | | | | | +--Paenibacillus nasutitermitis (2) | | | | | | | | | +--Alicyclobacillaceae (25) | | | | | | | | | | | +--Effusibacillus lacus (1) | | | | | | | | | | | +--Alicyclobacillus (1) | | | | | | | | | | | | | +--Alicyclobacillus sp. SO9 (1) | | | | | | | | | | | +--Alicyclobacillus mengziensis (9) | | | | | | | | | | | +--Kyrpidia spormannii (13) | | | | | | | | | | | +--Sulfoacidibacillus thermotolerans (1) | | | | | | | | | +--Planococcaceae (16) | | | | | | | | | | | +--Planococcus salinus (1) | | | | | | | | | | | +--Sporosarcina (12) | | | | | | | | | | | | | +--Sporosarcina sp. Te-1 (11) | | | | | | | | | | | | | +--Sporosarcina sp. Marseille-Q4063 (1) | | | | | | | | | | | +--Rummeliibacillus (2) | | | | | | | | | | | | | +--Rummeliibacillus sp. TYF005 (2) | | | | | | | | | | | +--Tetzosporium hominis (1) | | | | | | | | | +--Bacillaceae (118) | | | | | | | | | | | +--Peribacillus faecalis (1) | | | | | | | | | | | +--Bacillus aquiflavi (9) | | | | | | | | | | | +--Neobacillus thermocopriae (3) | | | | | | | | | | | +--Lentibacillus (6) | | | | | | | | | | | | | +--Lentibacillus sp. JNUCC-1 (6) | | | | | | | | | | | +--Psychrobacillus glaciei (3) | | | | | | | | | | | +--Peribacillus cavernae (1) | | | | | | | | | | | +--Gottfriedia endophytica (1) | | | | | | | | | | | +--Bacillus yapensis (3) | | | | | | | | | | | +--Psychrobacillus soli (2) | | | | | | | | | | | +--Oceanobacillus bengalensis (1) | | | | | | | | | | | +--Virgibacillus indicus (1) | | | | | | | | | | | +--Virgibacillus oceani (2) | | | | | | | | | | | +--Lysinibacillus telephonicus (1) | | | | | | | | | | | +--Oceanobacillus (2) | | | | | | | | | | | | | +--Oceanobacillus sp. J11TS1 (2) | | | | | | | | | | | +--Texcoconibacillus texcoconensis (1) | | | | | | | | | | | +--Aureibacillus halotolerans (1) | | | | | | | | | | | +--Lysinibacillus (5) | | | | | | | | | | | | | +--Lysinibacillus sp. 2017 (5) | | | | | | | | | | | +--Neobacillus rhizophilus (7) | | | | | | | | | | | +--Bacillus salacetis (1) | | | | | | | | | | | +--Lysinibacillus endophyticus (1) | | | | | | | | | | | +--Ornithinibacillus caprae (1) | | | | | | | | | | | +--Pseudogracilibacillus auburnensis (1) | | | | | | | | | | | +--Peribacillus saganii (1) | | | | | | | | | | | +--Pueribacillus theae (1) | | | | | | | | | | | +--Ornithinibacillus halotolerans (2) | | | | | | | | | | | +--Fervidibacillus halotolerans (1) | | | | | | | | | | | +--Tepidibacillus fermentans (3) | | | | | | | | | | | +--Halalkalibacter oceani (4) | | | | | | | | | | | +--Terrilactibacillus tamarindi (2) | | | | | | | | | | | +--Metabacillus lacus (1) | | | | | | | | | | | +--Metabacillus sediminilitoris (2) | | | | | | | | | | | +--Bacillaceae bacterium SAS-127 (1) | | | | | | | | | | | +--Lysinibacillus halotolerans (2) | | | | | | | | | | | +--Neobacillus mesonae (2) | | | | | | | | | | | +--Compostibacillus humi (4) | | | | | | | | | | | +--Bacillus (29) | | | | | | | | | | | | | +--Bacillus sp. J14TS2 (1) | | | | | | | | | | | | | +--Bacillus sp. FJAT-49711 (14) | | | | | | | | | | | | | +--Bacillus sp. 7884-1 (1) | | | | | | | | | | | | | +--Bacillus sp. V5-8f (1) | | | | | | | | | | | | | +--Bacillus sp. B1-b2 (4) | | | | | | | | | | | | | +--Bacillus sp. AFS041924 (3) | | | | | | | | | | | | | +--Bacillus sp. V59.32b (2) | | | | | | | | | | | | | +--Bacillus sp. T33-2 (1) | | | | | | | | | | | | | +--Bacillus sp. AFS040349 (1) | | | | | | | | | | | | | +--Bacillus sp. DNRA2 (1) | | | | | | | | | | | +--Salicibibacter halophilus (1) | | | | | | | | | | | +--Shouchella lonarensis (1) | | | | | | | | | | | +--Caldibacillus (1) | | | | | | | | | | | | | +--Caldibacillus debilis GB1 (1) | | | | | | | | | | | +--Tepidibacillus (2) | | | | | | | | | | | | | +--Tepidibacillus sp. HK-1 (2) | | | | | | | | | | | +--Weizmannia acidilactici (4) | | | | | | | | | +--Sporolactobacillaceae (3) | | | | | | | | | | | +--Sporolactobacillus shoreae (3) | | | | | | | | | +--Thermoactinomycetaceae (10) | | | | | | | | | +--Paenactinomyces guangxiensis (4) | | | | | | | | | +--Baia soyae (2) | | | | | | | | | +--Polycladospora coralii (1) | | | | | | | | | +--Shimazuella alba (1) | | | | | | | | | +--Thermoactinomyces daqus (1) | | | | | | | | | +--Marinithermofilum abyssi (1) | | | | | | | +--Dethiobacteria (1) | | | | | | | | | +--Dethiobacterales (1) | | | | | | | | | +--Dethiobacteraceae (1) | | | | | | | | | +--Dethiobacter (1) | | | | | | | | | +--Dethiobacter sp. (1) | | | | | | | +--Negativicutes (2) | | | | | | | | | +--Selenomonadales (1) | | | | | | | | | | | +--Sporomusaceae (1) | | | | | | | | | | | +--Sporomusa (1) | | | | | | | | | | | +--Sporomusa silvacetica DSM 10669 (1) | | | | | | | | | +--Veillonellales (1) | | | | | | | | | +--Veillonellaceae (1) | | | | | | | | | +--Megasphaera (1) | | | | | | | | | +--Megasphaera sp. AM44-1BH (1) | | | | | | | +--Firmicutes bacterium AF36-19BH (1) | | | | | | | +--Tissierellia (5) | | | | | | | | | +--Tissierellales (3) | | | | | | | | | | | +--Tissierellaceae (1) | | | | | | | | | | | | | +--Soehngenia longivitae (1) | | | | | | | | | | | +--Tepidimicrobiaceae (1) | | | | | | | | | | | | | +--Keratinibaculum paraultunense (1) | | | | | | | | | | | +--Sporanaerobacteraceae (1) | | | | | | | | | | | +--Anaerosalibacter massiliensis (1) | | | | | | | | | +--Tissierelliaincertaesedis (2) | | | | | | | | | +--Sedimentibacter (2) | | | | | | | | | +--Sedimentibacter hydroxybenzoicus DSM 7310 (1) | | | | | | | | | +--Sedimentibacter sp. zth1 (1) | | | | | | | +--Bacillota bacterium (2) | | | | | +--Firmicutes (416) | | | | | +--Firmicutes bacterium CAG:536 (1) | | | | | +--Limnochordia (1) | | | | | | | +--Limnochordales (1) | | | | | | | +--Limnochordaceae (1) | | | | | | | +--Limnochorda pilosa (1) | | | | | +--Firmicutes bacterium CAG:272 (1) | | | | | +--Erysipelotrichia (23) | | | | | | | +--Erysipelotrichales (23) | | | | | | | +--Erysipelotrichaceae (23) | | | | | | | +--Faecalibaculum rodentium (19) | | | | | | | +--Turicibacter sp. H121 (1) | | | | | | | +--unclassifiedErysipelotrichaceae (1) | | | | | | | | | +--Erysipelotrichaceae bacterium MTC7 (1) | | | | | | | +--Erysipelothrix larvae (1) | | | | | | | +--Catenibacterium (1) | | | | | | | +--Catenibacterium sp. CAG:290 (1) | | | | | +--Clostridia (124) | | | | | | | +--Thermoanaerobacterales (18) | | | | | | | | | +--Thermoanaerobacteraceae (18) | | | | | | | | | +--Thermanaeromonas (6) | | | | | | | | | | | +--Thermanaeromonas toyohensis ToBE (6) | | | | | | | | | +--Thermacetogenium (12) | | | | | | | | | +--Thermacetogenium phaeum DSM 12270 (12) | | | | | | | +--Clostridiales (106) | | | | | | | +--Ruminococcaceae (3) | | | | | | | | | +--Faecalibacterium (1) | | | | | | | | | | | +--Faecalibacterium sp. CAG:74 (1) | | | | | | | | | +--Ruminiclostridium (1) | | | | | | | | | | | +--[Clostridium] straminisolvens JCM 21531 (1) | | | | | | | | | +--Ruminococcus (1) | | | | | | | | | +--Ruminococcus torques CAG:61 (1) | | | | | | | +--Peptostreptococcaceae (6) | | | | | | | | | +--Peptoclostridium (5) | | | | | | | | | | | +--Peptoclostridium acidaminophilum DSM 3953 (5) | | | | | | | | | +--unclassifiedPeptostreptococcaceae (1) | | | | | | | | | +--Peptostreptococcaceae bacterium oral taxon 113 str. W5053 (1) | | | | | | | +--Eubacteriaceae (9) | | | | | | | | | +--Eubacterium sp. 68-3-10 (6) | | | | | | | | | +--Eubacteriaceae bacterium CHKCI004 (1) | | | | | | | | | +--Eubacterium (2) | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (1) | | | | | | | | | +--Eubacterium dolichum CAG:375 (1) | | | | | | | +--Clostridiaceae (20) | | | | | | | | | +--Clostridium sp. BL8 (1) | | | | | | | | | +--Clostridium (7) | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (3) | | | | | | | | | | | +--Clostridium collagenovorans DSM 3089 (2) | | | | | | | | | | | +--Clostridium argentinense CDC 2741 (2) | | | | | | | | | +--Caldisalinibacter kiritimatiensis (1) | | | | | | | | | +--Lactonifactor (1) | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (1) | | | | | | | | | +--Thermobrachium (1) | | | | | | | | | | | +--Thermobrachium celere DSM 8682 (1) | | | | | | | | | +--Fervidicella (2) | | | | | | | | | | | +--Fervidicella metallireducens AeB (2) | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | +--Clostridium sp. Maddingley MBC34-26 (1) | | | | | | | | | +--Clostridium sp. HMP27 (1) | | | | | | | | | +--Clostridium oryzae (1) | | | | | | | | | +--Lutispora (3) | | | | | | | | | +--Lutispora thermophila DSM 19022 (3) | | | | | | | +--Lachnospiraceae (42) | | | | | | | | | +--Blautia sp. An249 (1) | | | | | | | | | +--Anaerosporobacter (2) | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (2) | | | | | | | | | +--Parasporobacterium (3) | | | | | | | | | | | +--Parasporobacterium paucivorans DSM 15970 (3) | | | | | | | | | +--Blautia sp. YL58 (5) | | | | | | | | | +--Anaerostipes sp. 992a (17) | | | | | | | | | +--Lachnoclostridium sp. An131 (1) | | | | | | | | | +--Lachnoclostridium sp. An14 (2) | | | | | | | | | +--Dorea (2) | | | | | | | | | | | +--Dorea sp. D27 (2) | | | | | | | | | +--Pseudobutyrivibrio (2) | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (2) | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (1) | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | +--Roseburia (1) | | | | | | | | | | | +--Roseburia sp. CAG:50 (1) | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | +--Anaerocolumna (2) | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (2) | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | +--Clostridialesincertaesedis (5) | | | | | | | | | +--ClostridialesFamilyXVI.IncertaeSedis (3) | | | | | | | | | | | +--Carboxydocella (3) | | | | | | | | | | | +--Carboxydocella sporoproducens DSM 16521 (3) | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (2) | | | | | | | | | +--Eubacterium nodatum ATCC 33099 (2) | | | | | | | +--Peptococcaceae (20) | | | | | | | | | +--Desulfitobacterium (3) | | | | | | | | | | | +--Desulfitobacterium dichloroeliminans LMG P-21439 (3) | | | | | | | | | +--Desulfotomaculum (1) | | | | | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (1) | | | | | | | | | +--Desulfosporosinus sp. OL (3) | | | | | | | | | +--Desulfotomaculum ferrireducens (13) | | | | | | | +--unclassifiedClostridiales (1) | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | +--Bacilli (248) | | | | | | | +--Lactobacillales (49) | | | | | | | | | +--Streptococcaceae (4) | | | | | | | | | | | +--Streptococcus varani (4) | | | | | | | | | +--Carnobacteriaceae (17) | | | | | | | | | | | +--Marinilactibacillus sp. 15R (3) | | | | | | | | | | | +--Dolosigranulum (2) | | | | | | | | | | | | | +--Dolosigranulum pigrum ATCC 51524 (2) | | | | | | | | | | | +--Alloiococcus (9) | | | | | | | | | | | | | +--Alloiococcus otitis ATCC 51267 (9) | | | | | | | | | | | +--Carnobacterium sp. CP1 (3) | | | | | | | | | +--Enterococcaceae (11) | | | | | | | | | | | +--Enterococcus (4) | | | | | | | | | | | | | +--Enterococcus dispar ATCC 51266 (1) | | | | | | | | | | | | | +--Enterococcus cecorum DSM 20682 = ATCC 43198 (2) | | | | | | | | | | | | | +--Enterococcus columbae DSM 7374 = ATCC 51263 (1) | | | | | | | | | | | +--Tetragenococcus (3) | | | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (3) | | | | | | | | | | | +--Enterococcus sp. 10A9_DIV0425 (4) | | | | | | | | | +--Lactobacillaceae (15) | | | | | | | | | | | +--Lactobacillus (15) | | | | | | | | | | | +--Lactobacillus collinoides DSM 20515 = JCM 1123 (1) | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | +--Lactobacillus frumenti DSM 13145 (2) | | | | | | | | | | | +--Lactobacillus manihotivorans DSM 13343 = JCM 12514 (1) | | | | | | | | | | | +--Lactobacillus mucosae LM1 (2) | | | | | | | | | | | +--Lactobacilluscoryniformis (1) | | | | | | | | | | | | | +--Lactobacillus coryniformis subsp. coryniformis CECT 5711 (1) | | | | | | | | | | | +--Lactobacillus similis DSM 23365 = JCM 2765 (1) | | | | | | | | | | | +--Lactobacillus saniviri JCM 17471 = DSM 24301 (1) | | | | | | | | | | | +--Lactobacillus vini DSM 20605 (2) | | | | | | | | | | | +--Lactobacillus composti DSM 18527 = JCM 14202 (3) | | | | | | | | | +--Aerococcaceae (2) | | | | | | | | | +--Globicatella sp. HMSC072A10 (2) | | | | | | | +--Bacillales (197) | | | | | | | | | +--Staphylococcaceae (1) | | | | | | | | | | | +--Staphylococcus sp. HGB0015 (1) | | | | | | | | | +--Alicyclobacillaceae (10) | | | | | | | | | | | +--Alicyclobacillus (3) | | | | | | | | | | | | | +--Alicyclobacillus acidoterrestris ATCC 49025 (3) | | | | | | | | | | | +--Alicyclobacillus sp. USBA-503 (5) | | | | | | | | | | | +--Tumebacillus flagellatus (2) | | | | | | | | | +--Planococcaceae (1) | | | | | | | | | | | +--Bhargavaea (1) | | | | | | | | | | | +--Bhargavaea cecembensis DSE10 (1) | | | | | | | | | +--Paenibacillaceae (63) | | | | | | | | | | | +--Paenibacillaceae bacterium GAS479 (1) | | | | | | | | | | | +--Paenibacillus sp. Leaf72 (1) | | | | | | | | | | | +--Paenibacillus oryzae (1) | | | | | | | | | | | +--Paenibacillus sp. IHBB 10380 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL R5-0912 (1) | | | | | | | | | | | +--Paenibacillus yonginensis (22) | | | | | | | | | | | +--Paenibacillus sp. TCA20 (1) | | | | | | | | | | | +--Paenibacillus aquistagni (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H7-0331 (2) | | | | | | | | | | | +--Paenibacillus swuensis (2) | | | | | | | | | | | +--Paenibacillus sp. 32O-W (4) | | | | | | | | | | | +--Paenibacillus (2) | | | | | | | | | | | | | +--Paenibacillus mucilaginosus 3016 (1) | | | | | | | | | | | | | +--Paenibacillus uliginis N3/975 (1) | | | | | | | | | | | +--Paenibacillus sp. FSL H8-0548 (3) | | | | | | | | | | | +--Paenibacillus sp. UNCCL117 (1) | | | | | | | | | | | +--Paenibacillus tyrfis (1) | | | | | | | | | | | +--Aneurinibacillusgroup (2) | | | | | | | | | | | | | +--Aneurinibacillus sp. XH2 (2) | | | | | | | | | | | +--Brevibacillus (17) | | | | | | | | | | | +--Brevibacillus panacihumi W25 (17) | | | | | | | | | +--Bacillaceae (111) | | | | | | | | | | | +--Salimicrobium jeotgali (2) | | | | | | | | | | | +--Bacillus sp. SGD-V-76 (1) | | | | | | | | | | | +--Virgibacillus sp. LM2416 (3) | | | | | | | | | | | +--Halobacillus sp. BBL2006 (1) | | | | | | | | | | | +--Bacillus sp. FJAT-27916 (6) | | | | | | | | | | | +--Bacillus sp. FJAT-27997 (2) | | | | | | | | | | | +--Fictibacillus (1) | | | | | | | | | | | | | +--Fictibacillus macauensis ZFHKF-1 (1) | | | | | | | | | | | +--Anaerobacillus sp. NB2006 (2) | | | | | | | | | | | +--Amphibacillus (2) | | | | | | | | | | | | | +--Amphibacillus xylanus NBRC 15112 (2) | | | | | | | | | | | +--Paraliobacillus sp. PM-2 (2) | | | | | | | | | | | +--Bacillus sp. MUM 13 (3) | | | | | | | | | | | +--Quasibacillus thermotolerans (5) | | | | | | | | | | | +--Bacillus (72) | | | | | | | | | | | | | +--Bacillus infantis NRRL B-14911 (1) | | | | | | | | | | | | | +--Bacillus coahuilensis p1.1.43 (1) | | | | | | | | | | | | | +--Bacillus smithii 7_3_47FAA (66) | | | | | | | | | | | | | +--Bacillus akibai JCM 9157 (1) | | | | | | | | | | | | | +--Bacillus azotoformans LMG 9581 (1) | | | | | | | | | | | | | +--Bacillus wakoensis JCM 9140 (2) | | | | | | | | | | | +--Lysinibacillus (6) | | | | | | | | | | | | | +--Lysinibacillus manganicus DSM 26584 (2) | | | | | | | | | | | | | +--Lysinibacillus sinduriensis BLB-1 = JCM 15800 (1) | | | | | | | | | | | | | +--Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 (3) | | | | | | | | | | | +--Bacillus sp. FJAT-26390 (1) | | | | | | | | | | | +--Pontibacillus (1) | | | | | | | | | | | | | +--Pontibacillus litoralis JSM 072002 (1) | | | | | | | | | | | +--Gracilibacillus (1) | | | | | | | | | | | +--Gracilibacillus halophilus YIM-C55.5 (1) | | | | | | | | | +--unclassifiedBacillales (2) | | | | | | | | | | | +--Acidibacillus ferrooxidans (2) | | | | | | | | | +--Thermoactinomycetaceae (9) | | | | | | | | | +--Novibacillus thermophilus (9) | | | | | | | +--unclassifiedBacilli (2) | | | | | | | +--Bacilli bacterium VT-13-104 (2) | | | | | +--Firmicutes bacterium CAG:137 (1) | | | | | +--Negativicutes (12) | | | | | | | +--Selenomonadales (9) | | | | | | | | | +--Sporomusaceae (9) | | | | | | | | | +--Anaerosporomusa subterranea (1) | | | | | | | | | +--Sporomusa (8) | | | | | | | | | +--Sporomusa sphaeroides DSM 2875 (8) | | | | | | | +--Veillonellales (3) | | | | | | | +--Veillonellaceae (3) | | | | | | | +--Dialister (3) | | | | | | | +--Dialister succinatiphilus YIT 11850 (3) | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | +--Tissierellia (3) | | | | | +--Tissierellales (2) | | | | | | | +--Tissierellaceae (1) | | | | | | | | | +--Tissierella (1) | | | | | | | | | +--Tissierella praeacuta DSM 18095 (1) | | | | | | | +--Peptoniphilaceae (1) | | | | | | | +--Peptoniphilus sp. ING2-D1G (1) | | | | | +--unclassifiedTissierellia (1) | | | | | +--Tissierellia bacterium KA00581 (1) | | | +--Nitrospinae/Tectomicrobiagroup (6) | | | | | +--Nitrospinae (3) | | | | | | | +--Nitrospinia (3) | | | | | | | +--Nitrospinales (3) | | | | | | | +--Nitrospinaceae (3) | | | | | | | +--Nitrospina sp. SCGC_AAA799_A02 (1) | | | | | | | +--Nitrospina sp. SCGC_AAA799_C22 (2) | | | | | +--CandidatusTectomicrobia (3) | | | | | +--Candidatus Entotheonella sp. TSY2 (2) | | | | | +--Candidatus Entotheonella sp. TSY1 (1) | | | +--FCBgroup (172) | | | +--Fibrobacteres (1) | | | | | +--Chitinivibrionia (1) | | | | | +--Chitinivibrionales (1) | | | | | +--Chitinivibrionaceae (1) | | | | | +--Chitinivibrio (1) | | | | | +--Chitinivibrio alkaliphilus ACht1 (1) | | | +--Bacteroidetes/Chlorobigroup (61) | | | | | +--Bacteroidetes (61) | | | | | +--Chitinophagia (2) | | | | | | | +--Chitinophagales (2) | | | | | | | +--Chitinophagaceae (2) | | | | | | | +--Niastella vici (2) | | | | | +--Sphingobacteriia (3) | | | | | | | +--Sphingobacteriales (3) | | | | | | | +--Sphingobacteriaceae (3) | | | | | | | +--Pedobacter (1) | | | | | | | | | +--Pedobacter antarcticus 4BY (1) | | | | | | | +--Sphingobacterium (1) | | | | | | | | | +--Sphingobacterium paucimobilis HER1398 (1) | | | | | | | +--Sphingobacterium sp. JB170 (1) | | | | | +--Bacteroidia (42) | | | | | | | +--Bacteroidales (37) | | | | | | | | | +--Porphyromonadaceae (22) | | | | | | | | | | | +--Petrimonas mucosa (21) | | | | | | | | | | | +--Porphyromonas sp. HMSC065F10 (1) | | | | | | | | | +--Bacteroidaceae (6) | | | | | | | | | | | +--Bacteroides (6) | | | | | | | | | | | +--Bacteroides sp. CAG:462 (3) | | | | | | | | | | | +--Bacteroides cellulosilyticus CAG:158 (1) | | | | | | | | | | | +--Bacteroides plebeius CAG:211 (1) | | | | | | | | | | | +--Bacteroides nordii CL02T12C05 (1) | | | | | | | | | +--Dysgonamonadaceae (1) | | | | | | | | | | | +--Proteiniphilum saccharofermentans (1) | | | | | | | | | +--Prevotellaceae (8) | | | | | | | | | +--Alloprevotella (1) | | | | | | | | | | | +--Prevotella sp. oral taxon 473 str. F0040 (1) | | | | | | | | | +--Prevotella (7) | | | | | | | | | +--Prevotella sp. CAG:891 (1) | | | | | | | | | +--Prevotella sp. CAG:1058 (1) | | | | | | | | | +--Prevotella sp. CAG:279 (1) | | | | | | | | | +--Prevotella sp. CAG:520 (2) | | | | | | | | | +--Prevotella sp. CAG:5226 (2) | | | | | | | +--Marinilabiliales (5) | | | | | | | +--Salinivirgaceae (2) | | | | | | | | | +--Salinivirga cyanobacteriivorans (2) | | | | | | | +--Marinilabiliaceae (3) | | | | | | | +--Saccharicrinis (2) | | | | | | | | | +--Saccharicrinis fermentans DSM 9555 = JCM 21142 (2) | | | | | | | +--Geofilum (1) | | | | | | | +--Geofilum rubicundum JCM 15548 (1) | | | | | +--Flavobacteriia (5) | | | | | | | +--Flavobacteriales (5) | | | | | | | +--Flavobacteriaceae (5) | | | | | | | +--Gillisia (2) | | | | | | | | | +--Gillisia limnaea DSM 15749 (2) | | | | | | | +--Flavobacterium sp. TAB 87 (1) | | | | | | | +--Algibacter sp. SK-16 (1) | | | | | | | +--Maribacter sp. T28 (1) | | | | | +--Cytophagia (9) | | | | | +--Cytophagales (9) | | | | | +--Cyclobacteriaceae (7) | | | | | | | +--Indibacter (1) | | | | | | | | | +--Indibacter alkaliphilus LW1 (1) | | | | | | | +--Belliella (3) | | | | | | | | | +--Belliella baltica DSM 15883 (3) | | | | | | | +--Lunatimonas lonarensis (2) | | | | | | | +--Cecembia (1) | | | | | | | +--Cecembia lonarensis LW9 (1) | | | | | +--Hymenobacteraceae (1) | | | | | | | +--Pontibacter ummariensis (1) | | | | | +--Flammeovirgaceae (1) | | | | | +--Flammeovirga sp. SJP92 (1) | | | +--Bacteroidota/Chlorobiotagroup (109) | | | | | +--Balneolota (1) | | | | | | | +--Balneolia (1) | | | | | | | +--Balneolales (1) | | | | | | | +--Cyclonatronaceae (1) | | | | | | | +--Natronogracilivirga saccharolytica (1) | | | | | +--Bacteroidota (108) | | | | | +--Chitinophagia (12) | | | | | | | +--Chitinophagales (12) | | | | | | | +--Chitinophagaceae (12) | | | | | | | +--Chitinophaga costaii (1) | | | | | | | +--Chitinophaga caeni (1) | | | | | | | +--Arachidicoccus soli (8) | | | | | | | +--Taibaiella (1) | | | | | | | | | +--Taibaiella sp. (1) | | | | | | | +--Paraflavisolibacter caeni (1) | | | | | +--Sphingobacteriia (14) | | | | | | | +--Sphingobacteriales (14) | | | | | | | +--Sphingobacteriaceae (14) | | | | | | | +--Pedobacter (3) | | | | | | | | | +--Pedobacter sp. Leaf216 (1) | | | | | | | | | +--Pedobacter sp. MC2016-24 (1) | | | | | | | | | +--Pedobacter sp. (1) | | | | | | | +--Pedobacter changchengzhani (1) | | | | | | | +--Pedobacter nutrimenti (1) | | | | | | | +--Pedobacter hiemivivus (1) | | | | | | | +--Pedobacter puniceum (2) | | | | | | | +--Sphingobacterium (6) | | | | | | | +--Sphingobacterium sp. SGL-16 (6) | | | | | +--Bacteroidia (33) | | | | | | | +--Bacteroidales (26) | | | | | | | | | +--Dysgonomonadaceae (3) | | | | | | | | | | | +--Dysgonomonas (1) | | | | | | | | | | | | | +--Dysgonomonas sp. PH5-37 (1) | | | | | | | | | | | +--Dysgonamonadaceae bacterium (2) | | | | | | | | | +--Rikenellaceae (1) | | | | | | | | | | | +--Alistipes communis (1) | | | | | | | | | +--Bacteroidaceae (3) | | | | | | | | | | | +--Mediterranea (2) | | | | | | | | | | | | | +--Mediterranea sp. An20 (2) | | | | | | | | | | | +--Phocaeicola (1) | | | | | | | | | | | +--Phocaeicola coprocola CAG:162 (1) | | | | | | | | | +--Tannerellaceae (1) | | | | | | | | | | | +--Parabacteroides (1) | | | | | | | | | | | +--Parabacteroides sp. An277 (1) | | | | | | | | | +--Prevotellaceae (11) | | | | | | | | | | | +--Prevotella lacticifex (2) | | | | | | | | | | | +--Prevotella brunnea (1) | | | | | | | | | | | +--Prevotella (8) | | | | | | | | | | | +--Prevotella sp. P3-122 (8) | | | | | | | | | +--Williamwhitmaniaceae (2) | | | | | | | | | | | +--Williamwhitmania taraxaci (2) | | | | | | | | | +--Muribaculaceae (5) | | | | | | | | | +--Muribaculaceae bacterium Isolate-110 (HZI) (1) | | | | | | | | | +--Muribaculaceae bacterium Isolate-102 (HZI) (1) | | | | | | | | | +--Muribaculum (1) | | | | | | | | | | | +--Muribaculum sp. An287 (1) | | | | | | | | | +--Muribaculaceae bacterium Isolate-002 (NCI) (1) | | | | | | | | | +--Duncaniella freteri (1) | | | | | | | +--Marinilabiliales (7) | | | | | | | +--Prolixibacteraceae (2) | | | | | | | | | +--Prolixibacter (1) | | | | | | | | | | | +--Prolixibacter sp. SD074 (1) | | | | | | | | | +--Gaoshiqia sediminis (1) | | | | | | | +--Marinifilaceae (1) | | | | | | | | | +--Ancylomarina longa (1) | | | | | | | +--Marinilabiliaceae (4) | | | | | | | +--Saccharicrinis carchari (1) | | | | | | | +--Alkaliflexus (3) | | | | | | | +--Alkaliflexus sp. Ai-910 (3) | | | | | +--Flavobacteriia (24) | | | | | | | +--Flavobacteriales (24) | | | | | | | +--Flavobacteriaceae (17) | | | | | | | | | +--Flavobacterium piscinae (1) | | | | | | | | | +--Flavobacterium macacae (1) | | | | | | | | | +--Aquimarina (2) | | | | | | | | | | | +--Aquimarina sp. TRL1 (2) | | | | | | | | | +--Aequorivita (1) | | | | | | | | | | | +--Aequorivita sp. H23M31 (1) | | | | | | | | | +--Flavobacterium faecale (5) | | | | | | | | | +--Pustulibacterium marinum (2) | | | | | | | | | +--Flavobacterium psychrotolerans (1) | | | | | | | | | +--Maribacter (3) | | | | | | | | | | | +--Maribacter sp. ACAM166 (3) | | | | | | | | | +--Snuella sedimenti (1) | | | | | | | +--Parvicellaceae (6) | | | | | | | | | +--Parvicella tangerina (6) | | | | | | | +--Crocinitomicaceae (1) | | | | | | | +--Brumimicrobium salinarum (1) | | | | | +--Cytophagia (23) | | | | | | | +--Cytophagales (23) | | | | | | | +--Reichenbachiellaceae (1) | | | | | | | | | +--Marinoscillum (1) | | | | | | | | | +--Marinoscillum furvescens DSM 4134 (1) | | | | | | | +--Fulvivirgaceae (3) | | | | | | | | | +--Fulvivirga sediminis (2) | | | | | | | | | +--Fulvivirga (1) | | | | | | | | | +--Fulvivirga sp. M361 (1) | | | | | | | +--Hymenobacteraceae (11) | | | | | | | | | +--Adhaeribacter soli (1) | | | | | | | | | +--Adhaeribacter pallidiroseus (4) | | | | | | | | | +--Pontibacter (6) | | | | | | | | | +--Pontibacter sp. SGAir0037 (6) | | | | | | | +--Flammeovirgaceae (2) | | | | | | | | | +--Marinigracilibium pacificum (1) | | | | | | | | | +--Flammeovirga pectinis (1) | | | | | | | +--Spirosomataceae (6) | | | | | | | +--Dyadobacter luteus (1) | | | | | | | +--Arcticibacterium luteifluviistationis (4) | | | | | | | +--Spirosomataceae bacterium TFI 002 (1) | | | | | +--Saprospiria (2) | | | | | +--Saprospirales (2) | | | | | +--Lewinellaceae (2) | | | | | +--Flavilitoribacter (2) | | | | | +--Flavilitoribacter nigricans (strain ATCC 23147 / DSM 23189 / NBRC 102662 / NCIMB 1420 / SS-2) (2) | | | +--Gemmatimonadota (1) | | | +--Longimicrobiia (1) | | | +--Longimicrobiales (1) | | | +--Longimicrobiaceae (1) | | | +--Longimicrobium terrae (1) | +--methanotrophic endosymbiont of Bathymodiolus puteoserpentis (Logatchev) (1) | +--Archaea (2) | +--Euryarchaeota (2) | +--Thermoplasmata (2) | +--methanogenic archaeon ISO4-H5 (1) | +--Methanomassiliicoccales (1) | +--Methanomassiliicoccaceae (1) | +--CandidatusMethanomethylophilus (1) | +--Candidatus Methanomethylophilus alvus Mx1201 (1)