# Species tree for RF00181 # Generated from Rfam version 15.00 | +--Eukaryota (5736) | +--Metazoa (5479) | | | +--Nematoda (2) | | | | | +--Enoplea (2) | | | | | +--Trichocephalida (2) | | | | | +--Trichuridae (2) | | | | | +--Trichuris suis (2) | | | +--Chordata (5476) | | | | | +--Craniata (5476) | | | | | +--Vertebrata (5476) | | | | | +--Euteleostomi (5476) | | | | | +--Actinopterygii (1) | | | | | | | +--Neopterygii (1) | | | | | | | +--Teleostei (1) | | | | | | | +--Euteleostei (1) | | | | | | | +--Protacanthopterygii (1) | | | | | | | +--Salmoniformes (1) | | | | | | | +--Salmonidae (1) | | | | | | | +--Salmoninae (1) | | | | | | | +--Salmo salar (Atlantic salmon) (1) | | | | | +--Lepidosauria (2) | | | | | | | +--Squamata (2) | | | | | | | +--Scleroglossa (1) | | | | | | | | | +--Serpentes (1) | | | | | | | | | +--Henophidia (1) | | | | | | | | | +--Pythonidae (1) | | | | | | | | | +--Python molurus bivittatus (Burmese python) (1) | | | | | | | +--Iguania (1) | | | | | | | +--Iguanidae (1) | | | | | | | +--Polychrotinae (1) | | | | | | | +--Anolis carolinensis (green anole) (1) | | | | | +--Mammalia (5471) | | | | | | | +--Metatheria (1) | | | | | | | | | +--Dasyuromorphia (1) | | | | | | | | | +--Dasyuridae (1) | | | | | | | | | +--Sarcophilus harrisii (Tasmanian devil) (1) | | | | | | | +--Eutheria (5470) | | | | | | | +--Afrotheria (53) | | | | | | | | | +--Sirenia (21) | | | | | | | | | | | +--Trichechidae (21) | | | | | | | | | | | +--Trichechus manatus latirostris (21) | | | | | | | | | +--Proboscidea (19) | | | | | | | | | | | +--Elephantidae (19) | | | | | | | | | | | +--Loxodonta africana (African savanna elephant) (19) | | | | | | | | | +--Chrysochloridae (13) | | | | | | | | | +--Chrysochlorinae (13) | | | | | | | | | +--Chrysochloris asiatica (13) | | | | | | | +--Euarchontoglires (1992) | | | | | | | | | +--Primates (1133) | | | | | | | | | | | +--Haplorrhini (997) | | | | | | | | | | | | | +--Catarrhini (812) | | | | | | | | | | | | | | | +--Hominidae (231) | | | | | | | | | | | | | | | | | +--Pongo abelii (Sumatran orangutan) (48) | | | | | | | | | | | | | | | | | +--Pan paniscus (pygmy chimpanzee) (47) | | | | | | | | | | | | | | | | | +--Homo sapiens (human) (45) | | | | | | | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (44) | | | | | | | | | | | | | | | | | +--Pan troglodytes (chimpanzee) (47) | | | | | | | | | | | | | | | +--Hylobatidae (49) | | | | | | | | | | | | | | | | | +--Nomascus leucogenys (Northern white-cheeked gibbon) (49) | | | | | | | | | | | | | | | +--Cercopithecidae (532) | | | | | | | | | | | | | | | +--Cercopithecinae (357) | | | | | | | | | | | | | | | | | +--Papio anubis (Olive baboon) (45) | | | | | | | | | | | | | | | | | +--Chlorocebus sabaeus (44) | | | | | | | | | | | | | | | | | +--Macaca fascicularis (crab-eating macaque) (45) | | | | | | | | | | | | | | | | | +--Mandrillus leucophaeus (drill) (44) | | | | | | | | | | | | | | | | | +--Theropithecus gelada (gelada baboon) (46) | | | | | | | | | | | | | | | | | +--Macaca mulatta (Rhesus monkey) (44) | | | | | | | | | | | | | | | | | +--Cercocebus atys (sooty mangabey) (45) | | | | | | | | | | | | | | | | | +--Macaca nemestrina (pig-tailed macaque) (44) | | | | | | | | | | | | | | | +--Colobinae (175) | | | | | | | | | | | | | | | +--Colobus angolensis palliatus (44) | | | | | | | | | | | | | | | +--Rhinopithecus bieti (Black snub-nosed monkey) (43) | | | | | | | | | | | | | | | +--Piliocolobus tephrosceles (Ugandan red Colobus) (45) | | | | | | | | | | | | | | | +--Rhinopithecus roxellana (golden snub-nosed monkey) (43) | | | | | | | | | | | | | +--Platyrrhini (185) | | | | | | | | | | | | | +--Aotidae (49) | | | | | | | | | | | | | | | +--Aotus nancymaae (Ma's night monkey) (49) | | | | | | | | | | | | | +--Cebidae (136) | | | | | | | | | | | | | +--Saimiriinae (45) | | | | | | | | | | | | | | | +--Saimiri boliviensis boliviensis (Bolivian squirrel monkey) (45) | | | | | | | | | | | | | +--Callitrichinae (44) | | | | | | | | | | | | | | | +--Callithrix jacchus (white-tufted-ear marmoset) (44) | | | | | | | | | | | | | +--Cebinae (47) | | | | | | | | | | | | | +--Cebus apella (Tufted capuchin) (47) | | | | | | | | | | | +--Strepsirrhini (136) | | | | | | | | | | | +--Lemuriformes (86) | | | | | | | | | | | | | +--Indriidae (42) | | | | | | | | | | | | | | | +--Propithecus coquereli (Coquerel's sifaka) (42) | | | | | | | | | | | | | +--Cheirogaleidae (44) | | | | | | | | | | | | | +--Microcebus murinus (gray mouse lemur) (44) | | | | | | | | | | | +--Lorisiformes (50) | | | | | | | | | | | +--Galagidae (50) | | | | | | | | | | | +--Otolemur garnettii (small-eared galago) (50) | | | | | | | | | +--Scandentia (21) | | | | | | | | | | | +--Tupaiidae (21) | | | | | | | | | | | +--Tupaia chinensis (Chinese tree shrew) (21) | | | | | | | | | +--Glires (838) | | | | | | | | | +--Rodentia (827) | | | | | | | | | | | +--Hystricognathi (120) | | | | | | | | | | | | | +--Chinchillidae (33) | | | | | | | | | | | | | | | +--Chinchilla lanigera (33) | | | | | | | | | | | | | +--Caviidae (20) | | | | | | | | | | | | | | | +--Cavia porcellus (Domestic guinea pig) (20) | | | | | | | | | | | | | +--Bathyergidae (48) | | | | | | | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (17) | | | | | | | | | | | | | | | +--Heterocephalus glaber (naked mole-rat) (31) | | | | | | | | | | | | | +--Octodontidae (19) | | | | | | | | | | | | | +--Octodon degus (degu) (19) | | | | | | | | | | | +--Sciurognathi (707) | | | | | | | | | | | +--Muroidea (382) | | | | | | | | | | | | | +--Spalacidae (50) | | | | | | | | | | | | | | | +--Spalacinae (50) | | | | | | | | | | | | | | | +--Nannospalax galili (Upper Galilee mountains blind mole rat) (50) | | | | | | | | | | | | | +--Muridae (132) | | | | | | | | | | | | | | | +--Murinae (132) | | | | | | | | | | | | | | | +--Rattus norvegicus (Norway rat) (90) | | | | | | | | | | | | | | | +--Mus (42) | | | | | | | | | | | | | | | +--Mus spicilegus (steppe mouse) (20) | | | | | | | | | | | | | | | +--Mus musculus (house mouse) (22) | | | | | | | | | | | | | +--Cricetidae (200) | | | | | | | | | | | | | +--Arvicolinae (51) | | | | | | | | | | | | | | | +--Microtus ochrogaster (prairie vole) (51) | | | | | | | | | | | | | +--Cricetinae (84) | | | | | | | | | | | | | | | +--Cricetulus griseus (Chinese hamster) (50) | | | | | | | | | | | | | | | +--Mesocricetus auratus (golden hamster) (34) | | | | | | | | | | | | | +--Neotominae (65) | | | | | | | | | | | | | +--Neotoma lepida (desert woodrat) (25) | | | | | | | | | | | | | +--Peromyscus maniculatus bairdii (prairie deer mouse) (40) | | | | | | | | | | | +--Sciuridae (183) | | | | | | | | | | | | | +--Xerinae (88) | | | | | | | | | | | | | | | +--Marmotini (88) | | | | | | | | | | | | | | | +--Marmota marmota marmota (Alpine marmot) (16) | | | | | | | | | | | | | | | +--Spermophilus tridecemlineatus (thirteen-lined ground squirrel) (19) | | | | | | | | | | | | | | | +--Spermophilus parryii (Arctic ground squirrel) (16) | | | | | | | | | | | | | | | +--Spermophilus dauricus (Daurian ground squirrel) (19) | | | | | | | | | | | | | | | +--Marmota monax (woodchuck) (18) | | | | | | | | | | | | | +--Sciurinae (95) | | | | | | | | | | | | | +--Sciurini (95) | | | | | | | | | | | | | +--Sciurus carolinensis (gray squirrel) (51) | | | | | | | | | | | | | +--Sciurus vulgaris (Eurasian red squirrel) (44) | | | | | | | | | | | +--Heteromyidae (7) | | | | | | | | | | | | | +--Dipodomyinae (7) | | | | | | | | | | | | | +--Dipodomys ordii (Ord's kangaroo rat) (7) | | | | | | | | | | | +--Dipodidae (23) | | | | | | | | | | | | | +--Dipodinae (23) | | | | | | | | | | | | | +--Jaculus jaculus (lesser Egyptian jerboa) (23) | | | | | | | | | | | +--Castoridae (112) | | | | | | | | | | | +--Castor canadensis (American beaver) (112) | | | | | | | | | +--Lagomorpha (11) | | | | | | | | | +--Leporidae (11) | | | | | | | | | +--Oryctolagus cuniculus (rabbit) (11) | | | | | | | +--Laurasiatheria (3425) | | | | | | | +--Carnivora (1282) | | | | | | | | | +--Feliformia (488) | | | | | | | | | | | +--Herpestidae (50) | | | | | | | | | | | | | +--Suricata suricatta (meerkat) (50) | | | | | | | | | | | +--Hyaenidae (52) | | | | | | | | | | | | | +--Crocuta crocuta (spotted hyena) (52) | | | | | | | | | | | +--Felidae (386) | | | | | | | | | | | +--Pantherinae (109) | | | | | | | | | | | | | +--Panthera tigris altaica (Amur tiger) (55) | | | | | | | | | | | | | +--Panthera leo (lion) (54) | | | | | | | | | | | +--Felinae (222) | | | | | | | | | | | | | +--Puma concolor (puma) (53) | | | | | | | | | | | | | +--Felis catus (domestic cat) (57) | | | | | | | | | | | | | +--Lynx pardinus (Spanish lynx) (56) | | | | | | | | | | | | | +--Lynx canadensis (Canada lynx) (56) | | | | | | | | | | | +--Acinonychinae (55) | | | | | | | | | | | +--Acinonyx jubatus (cheetah) (55) | | | | | | | | | +--Caniformia (794) | | | | | | | | | +--Otariidae (52) | | | | | | | | | | | +--Callorhinus ursinus (northern fur seal) (52) | | | | | | | | | +--Phocidae (105) | | | | | | | | | | | +--Monachus schauinslandi (Hawaiian monk seal) (52) | | | | | | | | | | | +--Leptonychotes weddellii (Weddell seal) (53) | | | | | | | | | +--Mustelidae (179) | | | | | | | | | | | +--Martinae (48) | | | | | | | | | | | | | +--Gulo gulo (wolverine) (48) | | | | | | | | | | | +--Lutrinae (46) | | | | | | | | | | | | | +--Enhydra lutris kenyoni (46) | | | | | | | | | | | +--Mustelinae (85) | | | | | | | | | | | +--Neovison vison (42) | | | | | | | | | | | +--Mustela putorius furo (domestic ferret) (43) | | | | | | | | | +--Ursidae (172) | | | | | | | | | | | +--Ursus americanus (American black bear) (57) | | | | | | | | | | | +--Ailuropoda melanoleuca (giant panda) (58) | | | | | | | | | | | +--Ursus maritimus (polar bear) (57) | | | | | | | | | +--Canidae (232) | | | | | | | | | | | +--Canis lupus dingo (dingo) (60) | | | | | | | | | | | +--Vulpes vulpes (red fox) (60) | | | | | | | | | | | +--Nyctereutes procyonoides (raccoon dog) (53) | | | | | | | | | | | +--Canis lupus familiaris (dog) (59) | | | | | | | | | +--Odobenidae (54) | | | | | | | | | +--Odobenus rosmarus divergens (Pacific walrus) (54) | | | | | | | +--Cetartiodactyla (1519) | | | | | | | | | +--Tylopoda (247) | | | | | | | | | | | +--Camelidae (247) | | | | | | | | | | | +--Vicugna pacos (alpaca) (60) | | | | | | | | | | | +--Camelus dromedarius (Arabian camel) (64) | | | | | | | | | | | +--Camelus ferus (Wild Bactrian camel) (59) | | | | | | | | | | | +--Camelus bactrianus (Bactrian camel) (64) | | | | | | | | | +--Cetacea (680) | | | | | | | | | | | +--Odontoceti (470) | | | | | | | | | | | | | +--Monodontidae (124) | | | | | | | | | | | | | | | +--Monodon monoceros (narwhal) (62) | | | | | | | | | | | | | | | +--Delphinapterus leucas (beluga whale) (62) | | | | | | | | | | | | | +--Phocoenidae (78) | | | | | | | | | | | | | | | +--Phocoena sinus (vaquita) (78) | | | | | | | | | | | | | +--Physeteridae (69) | | | | | | | | | | | | | | | +--Physeter catodon (sperm whale) (69) | | | | | | | | | | | | | +--Lipotidae (67) | | | | | | | | | | | | | | | +--Lipotes vexillifer (Yangtze River dolphin) (67) | | | | | | | | | | | | | +--Delphinidae (132) | | | | | | | | | | | | | +--Sousa chinensis (Indo-pacific humpbacked dolphin) (64) | | | | | | | | | | | | | +--Tursiops truncatus (bottlenosed dolphin) (68) | | | | | | | | | | | +--Mysticeti (210) | | | | | | | | | | | +--Balaenopteridae (143) | | | | | | | | | | | | | +--Balaenoptera musculus (Blue whale) (73) | | | | | | | | | | | | | +--Balaenoptera physalus (Fin whale) (70) | | | | | | | | | | | +--Eschrichtiidae (67) | | | | | | | | | | | +--Eschrichtius robustus (grey whale) (67) | | | | | | | | | +--Ruminantia (483) | | | | | | | | | | | +--Pecora (483) | | | | | | | | | | | +--Bovidae (295) | | | | | | | | | | | | | +--Caprinae (77) | | | | | | | | | | | | | | | +--Capra hircus (goat) (39) | | | | | | | | | | | | | | | +--Ovis aries (sheep) (38) | | | | | | | | | | | | | +--Bovinae (218) | | | | | | | | | | | | | +--Bos grunniens (domestic yak) (46) | | | | | | | | | | | | | +--Bos indicus (45) | | | | | | | | | | | | | +--Bos (42) | | | | | | | | | | | | | | | +--Bos indicus x Bos taurus (hybrid cattle) (42) | | | | | | | | | | | | | +--Bos taurus (cattle) (42) | | | | | | | | | | | | | +--Bos grunniens mutus (43) | | | | | | | | | | | +--Moschidae (38) | | | | | | | | | | | | | +--Moschus moschiferus (Siberian musk deer) (38) | | | | | | | | | | | +--Cervidae (150) | | | | | | | | | | | +--Odocoileinae (44) | | | | | | | | | | | | | +--Odocoileus virginianus texanus (44) | | | | | | | | | | | +--Muntiacinae (36) | | | | | | | | | | | | | +--Muntiacus reevesi (Chinese muntjac) (36) | | | | | | | | | | | +--Cervinae (70) | | | | | | | | | | | +--Cervus elaphus yarkandensis (36) | | | | | | | | | | | +--Cervus elaphus hippelaphus (34) | | | | | | | | | +--Suina (109) | | | | | | | | | +--Suidae (45) | | | | | | | | | | | +--Sus scrofa (pig) (45) | | | | | | | | | +--Tayassuidae (64) | | | | | | | | | +--Catagonus wagneri (Chacoan peccary) (64) | | | | | | | +--Insectivora (28) | | | | | | | | | +--Talpidae (23) | | | | | | | | | | | +--Galemys pyrenaicus (23) | | | | | | | | | +--Erinaceidae (5) | | | | | | | | | +--Erinaceinae (5) | | | | | | | | | +--Erinaceus europaeus (western European hedgehog) (5) | | | | | | | +--Chiroptera (409) | | | | | | | | | +--Microchiroptera (305) | | | | | | | | | | | +--Rhinolophidae (103) | | | | | | | | | | | | | +--Hipposiderinae (50) | | | | | | | | | | | | | | | +--Hipposideros armiger (50) | | | | | | | | | | | | | +--Rhinolophinae (53) | | | | | | | | | | | | | +--Rhinolophus ferrumequinum (greater horseshoe bat) (53) | | | | | | | | | | | +--Phyllostomidae (14) | | | | | | | | | | | | | +--Phyllostominae (14) | | | | | | | | | | | | | +--Phyllostomus discolor (pale spear-nosed bat) (14) | | | | | | | | | | | +--Molossidae (29) | | | | | | | | | | | | | +--Molossus molossus (Pallas's mastiff bat) (29) | | | | | | | | | | | +--Vespertilionidae (159) | | | | | | | | | | | +--Myotis lucifugus (little brown bat) (28) | | | | | | | | | | | +--Eptesicus nilssoni (northern bat) (27) | | | | | | | | | | | +--Myotis davidii (28) | | | | | | | | | | | +--Pipistrellus kuhlii (Kuhl's pipistrelle) (19) | | | | | | | | | | | +--Myotis brandtii (29) | | | | | | | | | | | +--Myotis myotis (28) | | | | | | | | | +--Megachiroptera (104) | | | | | | | | | +--Pteropodidae (104) | | | | | | | | | +--Pteropodinae (104) | | | | | | | | | +--Rousettus aegyptiacus (Egyptian rousette) (30) | | | | | | | | | +--Pteropus vampyrus (large flying fox) (37) | | | | | | | | | +--Pteropus alecto (black flying fox) (37) | | | | | | | +--Perissodactyla (187) | | | | | | | +--Equidae (122) | | | | | | | | | +--Equus caballus (horse) (62) | | | | | | | | | +--Equus asinus (ass) (60) | | | | | | | +--Rhinocerotidae (65) | | | | | | | +--Diceros bicornis minor (65) | | | | | +--Archosauria (2) | | | | | +--Dinosauria (2) | | | | | +--Saurischia (2) | | | | | +--Theropoda (2) | | | | | +--Coelurosauria (2) | | | | | +--Aves (2) | | | | | +--Neognathae (2) | | | | | +--Passeriformes (1) | | | | | | | +--Corvoidea (1) | | | | | | | +--Aegithalidae (1) | | | | | | | +--Aegithalos caudatus (1) | | | | | +--Charadriiformes (1) | | | | | +--Rostratulidae (1) | | | | | +--Rostratula benghalensis (greater painted-snipe) (1) | | | +--Mollusca (1) | | | +--Bivalvia (1) | | | +--Pteriomorphia (1) | | | +--Mytiloida (1) | | | +--Mytiloidea (1) | | | +--Mytilidae (1) | | | +--Mytilinae (1) | | | +--Mytilus galloprovincialis (Mediterranean mussel) (1) | +--Viridiplantae (3) | | | +--Streptophyta (3) | | | +--Embryophyta (3) | | | +--Tracheophyta (3) | | | +--Spermatophyta (3) | | | +--Magnoliophyta (2) | | | | | +--Liliopsida (1) | | | | | | | +--Arecaceae (1) | | | | | | | +--Arecoideae (1) | | | | | | | +--Cocoseae (1) | | | | | | | +--Elaeidinae (1) | | | | | | | +--Elaeis guineensis (African oil palm) (1) | | | | | +--eudicotyledons (1) | | | | | +--coreeudicotyledons (1) | | | | | +--asterids (1) | | | | | +--Ericales (1) | | | | | +--Theaceae (1) | | | | | +--Camellia sinensis (1) | | | +--Coniferopsida (1) | | | +--Coniferales (1) | | | +--Taxaceae (1) | | | +--Taxus wallichiana var. chinensis (1) | +--Opisthokonta (254) | +--Metazoa (252) | | | +--Eumetazoa (252) | | | +--Bilateria (252) | | | +--Deuterostomia (252) | | | +--Chordata (252) | | | +--Craniata (252) | | | +--Vertebrata (252) | | | +--Gnathostomata (252) | | | +--Teleostomi (252) | | | +--Euteleostomi (252) | | | +--Sarcopterygii (252) | | | +--Dipnotetrapodomorpha (252) | | | +--Tetrapoda (252) | | | +--Amniota (252) | | | +--Mammalia (252) | | | +--Theria (252) | | | +--Eutheria (252) | | | +--Afrotheria (15) | | | | | +--Tubulidentata (15) | | | | | +--Orycteropodidae (15) | | | | | +--Orycteropus (15) | | | | | +--Orycteropus afer afer (15) | | | +--Boreoeutheria (237) | | | +--Euarchontoglires (130) | | | | | +--Primates (130) | | | | | +--Haplorrhini (88) | | | | | | | +--Simiiformes (47) | | | | | | | | | +--Platyrrhini (47) | | | | | | | | | +--Cebidae (47) | | | | | | | | | +--Cebinae (47) | | | | | | | | | +--Cebus imitator (Panamanian white-faced capuchin) (47) | | | | | | | +--Tarsiiformes (41) | | | | | | | +--Tarsiidae (41) | | | | | | | +--Carlito syrichta (Philippine tarsier) (41) | | | | | +--Strepsirrhini (42) | | | | | +--Lemuriformes (42) | | | | | +--Lemuridae (42) | | | | | +--Prolemur simus (greater bamboo lemur) (42) | | | +--Laurasiatheria (107) | | | +--Artiodactyla (107) | | | +--Whippomorpha (66) | | | | | +--Cetacea (66) | | | | | +--Odontoceti (66) | | | | | +--Phocoenidae (66) | | | | | +--Neophocaena (66) | | | | | +--Neophocaena asiaeorientalis asiaeorientalis (yangtze finless porpoise) (66) | | | +--Ruminantia (41) | | | +--Pecora (41) | | | +--Bovidae (41) | | | +--Bovinae (41) | | | +--Bison (41) | | | +--Bison bison bison (north american plains bison) (41) | +--Fungi (2) | +--Dikarya (2) | +--Ascomycota (2) | +--saccharomyceta (2) | +--Pezizomycotina (2) | +--Pezizomycetes (2) | +--Pezizales (2) | +--Tuberaceae (2) | +--Choiromyces (2) | +--Choiromyces venosus 120613-1 (2)