# Species tree for RF00114 # Generated from Rfam version 15.00 | +--Eukaryota (12) | | | +--Metazoa (9) | | | | | +--Chordata (6) | | | | | | | +--Craniata (6) | | | | | | | +--Vertebrata (6) | | | | | | | +--Euteleostomi (6) | | | | | | | +--Mammalia (1) | | | | | | | | | +--Eutheria (1) | | | | | | | | | +--Euarchontoglires (1) | | | | | | | | | +--Glires (1) | | | | | | | | | +--Rodentia (1) | | | | | | | | | +--Hystricognathi (1) | | | | | | | | | +--Bathyergidae (1) | | | | | | | | | +--Fukomys damarensis (Damara mole-rat) (1) | | | | | | | +--Archosauria (5) | | | | | | | +--Dinosauria (5) | | | | | | | +--Saurischia (5) | | | | | | | +--Theropoda (5) | | | | | | | +--Coelurosauria (5) | | | | | | | +--Aves (5) | | | | | | | +--Neognathae (5) | | | | | | | +--Passeriformes (4) | | | | | | | | | +--Corvoidea (2) | | | | | | | | | | | +--Irenidae (2) | | | | | | | | | | | +--Chloropsis hardwickii (2) | | | | | | | | | +--Sittidae (1) | | | | | | | | | | | +--Tichodroma muraria (1) | | | | | | | | | +--Timaliidae (1) | | | | | | | | | +--Pteruthius melanotis (1) | | | | | | | +--Musophagiformes (1) | | | | | | | +--Musophagidae (1) | | | | | | | +--Corythaeola cristata (great blue turaco) (1) | | | | | +--Arthropoda (3) | | | | | +--Hexapoda (2) | | | | | | | +--Insecta (2) | | | | | | | +--Pterygota (2) | | | | | | | +--Neoptera (2) | | | | | | | +--Endopterygota (2) | | | | | | | +--Diptera (2) | | | | | | | +--Nematocera (1) | | | | | | | | | +--Chironomoidea (1) | | | | | | | | | +--Chironomidae (1) | | | | | | | | | +--Clunio marinus (1) | | | | | | | +--Brachycera (1) | | | | | | | +--Muscomorpha (1) | | | | | | | +--Oestroidea (1) | | | | | | | +--Calliphoridae (1) | | | | | | | +--Luciliinae (1) | | | | | | | +--Lucilia cuprina (1) | | | | | +--Crustacea (1) | | | | | +--Branchiopoda (1) | | | | | +--Diplostraca (1) | | | | | +--Cladocera (1) | | | | | +--Anomopoda (1) | | | | | +--Daphniidae (1) | | | | | +--Daphnia magna (1) | | | +--Viridiplantae (3) | | | +--Streptophyta (3) | | | +--Embryophyta (2) | | | | | +--Tracheophyta (2) | | | | | +--Spermatophyta (2) | | | | | +--Magnoliophyta (2) | | | | | +--Liliopsida (1) | | | | | | | +--Poales (1) | | | | | | | +--Poaceae (1) | | | | | | | +--BEPclade (1) | | | | | | | +--Ehrhartoideae (1) | | | | | | | +--Oryzeae (1) | | | | | | | +--Oryza sativa Indica Group (1) | | | | | +--eudicotyledons (1) | | | | | +--coreeudicotyledons (1) | | | | | +--asterids (1) | | | | | +--lamiids (1) | | | | | +--Gentianales (1) | | | | | +--Rubiaceae (1) | | | | | +--Ixoroideae (1) | | | | | +--Coffeeae (1) | | | | | +--Coffea canephora (1) | | | +--Streptophytina (1) | | | +--Zygnemophyceae (1) | | | +--Zygnematophycidae (1) | | | +--Desmidiales (1) | | | +--Closteriaceae (1) | | | +--Closterium (1) | | | +--Closteriumperacerosum-strigosum-littoralecomplex (1) | | | +--Closterium sp. NIES-67 (1) | +--Bacteria (738) | | | +--Bacteroidetes (2) | | | | | +--Flavobacteriia (1) | | | | | | | +--Flavobacteriales (1) | | | | | | | +--Flavobacteriaceae (1) | | | | | | | +--Sandarakinotalea sediminis (1) | | | | | +--Flavobacteria bacterium BBFL7 (1) | | | +--unclassifiedBacteria (1) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | | | +--Proteobacteria (447) | | | | | +--gamma proteobacterium HdN1 (1) | | | | | +--gamma proteobacterium IMCC2047 (1) | | | | | +--delta/epsilonsubdivisions (2) | | | | | | | +--Epsilonproteobacteria (2) | | | | | | | +--Campylobacterales (2) | | | | | | | +--Campylobacteraceae (2) | | | | | | | +--Campylobacter sp. NCTC 13003 (1) | | | | | | | +--Campylobacter (1) | | | | | | | +--Campylobacter pinnipediorum subsp. caledonicus (1) | | | | | +--Epsilonproteobacteria (2) | | | | | | | +--Campylobacterales (2) | | | | | | | +--Campylobacteraceae (2) | | | | | | | +--Campylobacter lari RM2100 (1) | | | | | | | +--Arcobacter sp. JC84 (1) | | | | | +--gamma proteobacterium S1-72 (1) | | | | | +--Gammaproteobacteria (405) | | | | | | | +--Baumannia cicadellinicola str. Hc (Homalodisca coagulata) (1) | | | | | | | +--unclassifiedGammaproteobacteria (4) | | | | | | | | | +--Pseudohongiella spirulinae (1) | | | | | | | | | +--SAR86 cluster bacterium SAR86A (1) | | | | | | | | | +--Pseudohongiella acticola (1) | | | | | | | | | +--Wohlfahrtiimonas (1) | | | | | | | | | +--Wohlfahrtiimonas chitiniclastica SH04 (1) | | | | | | | +--Reinekea blandensis MED297 (1) | | | | | | | +--Pasteurellales (32) | | | | | | | | | +--Haemophilus felis (1) | | | | | | | | | +--Bisgaard Taxon 5 (1) | | | | | | | | | +--Bisgaard Taxon 40 (1) | | | | | | | | | +--Actinobacillus rossii (1) | | | | | | | | | +--Pasteurellaceae (26) | | | | | | | | | | | +--Haemophilus paraphrohaemolyticus (1) | | | | | | | | | | | +--Pasteurella multocida subsp. multocida str. Pm70 (1) | | | | | | | | | | | +--Mannheimia succiniciproducens MBEL55E (1) | | | | | | | | | | | +--Phocoenobacter uteri (1) | | | | | | | | | | | +--Actinobacillus pleuropneumoniae serovar 5b str. L20 (1) | | | | | | | | | | | +--Histophilus somni (1) | | | | | | | | | | | +--Haemophilus parasuis SH0165 (1) | | | | | | | | | | | +--Pasteurella (1) | | | | | | | | | | | | | +--Pasteurella bettyae CCUG 2042 (1) | | | | | | | | | | | +--Actinobacillus muris (1) | | | | | | | | | | | +--Haemophilus ducreyi 35000HP (1) | | | | | | | | | | | +--Haemophilus influenzae Rd KW20 (2) | | | | | | | | | | | +--Aggregatibacter segnis ATCC 33393 (1) | | | | | | | | | | | +--Nicoletella semolina (1) | | | | | | | | | | | +--Bisgaardia hudsonensis (1) | | | | | | | | | | | +--Haemophilus paracuniculus (1) | | | | | | | | | | | +--Gallibacterium salpingitidis (1) | | | | | | | | | | | +--Volucribacter psittacicida (1) | | | | | | | | | | | +--Actinobacillus delphinicola (1) | | | | | | | | | | | +--Actinobacillus indolicus (1) | | | | | | | | | | | +--Lonepinella koalarum (1) | | | | | | | | | | | +--Chelonobacter oris (1) | | | | | | | | | | | +--unclassifiedPasteurellaceae (1) | | | | | | | | | | | | | +--Pasteurellaceae bacterium 15-036681 (1) | | | | | | | | | | | +--Actinobacillus succinogenes 130Z (1) | | | | | | | | | | | +--Haemophilus pittmaniae (1) | | | | | | | | | | | +--Avibacterium volantium (1) | | | | | | | | | +--Pasteurellaceae bacterium Baika1 (1) | | | | | | | | | +--Bisgaard Taxon 7 (1) | | | | | | | +--Enterobacterales (29) | | | | | | | | | +--Yersiniaceae (4) | | | | | | | | | | | +--Serratia sp. DD3 (1) | | | | | | | | | | | +--Ewingella (1) | | | | | | | | | | | | | +--Ewingella americana ATCC 33852 (1) | | | | | | | | | | | +--Rahnella (1) | | | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (1) | | | | | | | | | | | +--Chania (1) | | | | | | | | | | | +--Chania multitudinisentens RB-25 (1) | | | | | | | | | +--Pectobacteriaceae (2) | | | | | | | | | | | +--Sodalis praecaptivus (1) | | | | | | | | | | | +--Sodalis sp. TME1 (1) | | | | | | | | | +--Morganellaceae (5) | | | | | | | | | | | +--Moellerella (1) | | | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (1) | | | | | | | | | | | +--Xenorhabdus (2) | | | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (1) | | | | | | | | | | | | | +--Xenorhabdus bovienii str. kraussei Quebec (1) | | | | | | | | | | | +--Morganella (1) | | | | | | | | | | | | | +--Morganellamorganii (1) | | | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (1) | | | | | | | | | | | +--Providencia (1) | | | | | | | | | | | +--Providencia sneebia DSM 19967 (1) | | | | | | | | | +--Enterobacteriaceae (12) | | | | | | | | | | | +--Escherichia (1) | | | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (1) | | | | | | | | | | | +--Klebsiella sp. RIT-PI-d (1) | | | | | | | | | | | +--unclassifiedEnterobacteriaceae (6) | | | | | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (5) | | | | | | | | | | | | | | | +--Candidatus Hoaglandella endobia (1) | | | | | | | | | | | | | | | +--secondary endosymbiont of Ctenarytaina eucalypti (1) | | | | | | | | | | | | | | | +--secondary endosymbiont of Trabutina mannipara (1) | | | | | | | | | | | | | | | +--Candidatus Doolittlea endobia (1) | | | | | | | | | | | | | | | +--Candidatus Gullanella endobia (1) | | | | | | | | | | | | | +--Enterobacteriaceae bacterium strain FGI 57 (1) | | | | | | | | | | | +--Klebsiella michiganensis (1) | | | | | | | | | | | +--Mangrovibacter sp. MFB070 (1) | | | | | | | | | | | +--Buttiauxella (1) | | | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (1) | | | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | | | +--unclassifiedEnterobacterales (1) | | | | | | | | | | | +--Plesiomonas (1) | | | | | | | | | | | +--Plesiomonas shigelloides 302-73 (1) | | | | | | | | | +--Erwiniaceae (4) | | | | | | | | | | | +--Erwinia iniecta (1) | | | | | | | | | | | +--Erwinia sp. Leaf53 (1) | | | | | | | | | | | +--Tatumella (1) | | | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (1) | | | | | | | | | | | +--Erwinia gerundensis (1) | | | | | | | | | +--Hafniaceae (1) | | | | | | | | | +--Hafnia (1) | | | | | | | | | +--Hafnia alvei FB1 (1) | | | | | | | +--Aeromonadales (11) | | | | | | | | | +--Aeromonadaceae (6) | | | | | | | | | | | +--Tolumonas auensis DSM 9187 (1) | | | | | | | | | | | +--Oceanimonas doudoroffii (1) | | | | | | | | | | | +--Oceanimonas sp. GK1 (1) | | | | | | | | | | | +--Aeromonas simiae (1) | | | | | | | | | | | +--Oceanisphaera sp. V1-41 (1) | | | | | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1) | | | | | | | | | +--Succinivibrionaceae (5) | | | | | | | | | +--Succinatimonas (1) | | | | | | | | | | | +--Succinatimonas sp. CAG:777 (1) | | | | | | | | | +--Ruminobacter amylophilus (1) | | | | | | | | | +--Anaerobiospirillum thomasii (2) | | | | | | | | | +--Succinatimonas hippei YIT 12066 (1) | | | | | | | +--Orbales (3) | | | | | | | | | +--Orbaceae (3) | | | | | | | | | +--Frischella perrara (1) | | | | | | | | | +--CandidatusSchmidhempelia (1) | | | | | | | | | | | +--Candidatus Schmidhempelia bombi str. Bimp (1) | | | | | | | | | +--Gilliamella apicola (1) | | | | | | | +--OMGgroup (2) | | | | | | | | | +--marine gamma proteobacterium HTCC2080 (1) | | | | | | | | | +--gamma proteobacterium IMCC3088 (1) | | | | | | | +--Gallaecimonas sp. 3-C-1 (1) | | | | | | | +--Legionellales (6) | | | | | | | | | +--Legionellaceae (6) | | | | | | | | | +--Legionella (1) | | | | | | | | | | | +--Legionella fallonii LLAP-10 (1) | | | | | | | | | +--Legionella tucsonensis (1) | | | | | | | | | +--Legionella jordanis (1) | | | | | | | | | +--Legionella drancourtii LLAP12 (1) | | | | | | | | | +--Legionella spiritensis (1) | | | | | | | | | +--Legionella waltersii (1) | | | | | | | +--Alteromonadales (75) | | | | | | | | | +--Colwelliaceae (7) | | | | | | | | | | | +--Thalassomonas actiniarum (1) | | | | | | | | | | | +--Thalassotalea sp. PP2-459 (1) | | | | | | | | | | | +--Thalassotalea sp. ND16A (1) | | | | | | | | | | | +--Thalassomonas agarivorans (1) | | | | | | | | | | | +--Colwellia sp. BCw111 (1) | | | | | | | | | | | +--Colwellia sp. PAMC 20917 (1) | | | | | | | | | | | +--Colwellia sp. MT41 (1) | | | | | | | | | +--Ferrimonadaceae (3) | | | | | | | | | | | +--Paraferrimonas sedimenticola (1) | | | | | | | | | | | +--Ferrimonas marina (1) | | | | | | | | | | | +--Ferrimonas balearica DSM 9799 (1) | | | | | | | | | +--Pseudoalteromonadaceae (12) | | | | | | | | | | | +--Pseudoalteromonas sp. OCN003 (1) | | | | | | | | | | | +--Pseudoalteromonas ulvae (1) | | | | | | | | | | | +--Pseudoalteromonas sp. A25 (1) | | | | | | | | | | | +--Pseudoalteromonas rubra (1) | | | | | | | | | | | +--Pseudoalteromonas citrea (1) | | | | | | | | | | | +--Pseudoalteromonas haloplanktis TAC125 (1) | | | | | | | | | | | +--Pseudoalteromonas sp. Y2 (1) | | | | | | | | | | | +--Psychrosphaera saromensis (1) | | | | | | | | | | | +--Pseudoalteromonas ruthenica (1) | | | | | | | | | | | +--Pseudoalteromonas sp. KDW4 (1) | | | | | | | | | | | +--Pseudoalteromonas phenolica (1) | | | | | | | | | | | +--Pseudoalteromonas sp. S4498 (1) | | | | | | | | | +--Shewanellaceae (14) | | | | | | | | | | | +--Shewanella sediminis HAW-EB3 (1) | | | | | | | | | | | +--Shewanella oneidensis MR-1 (1) | | | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | | | +--Shewanella loihica PV-4 (1) | | | | | | | | | | | +--Shewanella fodinae (1) | | | | | | | | | | | +--Shewanella algae (1) | | | | | | | | | | | +--Shewanella violacea DSS12 (1) | | | | | | | | | | | +--Shewanella amazonensis SB2B (1) | | | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (1) | | | | | | | | | | | +--Shewanella woodyi ATCC 51908 (1) | | | | | | | | | | | +--Shewanella pealeana ATCC 700345 (1) | | | | | | | | | | | +--Shewanella denitrificans OS217 (1) | | | | | | | | | | | +--Shewanella spongiae (1) | | | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | +--Idiomarinaceae (8) | | | | | | | | | | | +--Idiomarina loihiensis L2TR (1) | | | | | | | | | | | +--Idiomarina planktonica (1) | | | | | | | | | | | +--Pseudidiomarina sp. KYW314 (1) | | | | | | | | | | | +--Idiomarina sp. 10-D-4 (1) | | | | | | | | | | | +--Pseudidiomarina salinarum (1) | | | | | | | | | | | +--Pseudidiomarina taiwanensis (1) | | | | | | | | | | | +--Idiomarina sp. A28L (1) | | | | | | | | | | | +--Idiomarina seosinensis (1) | | | | | | | | | +--gamma proteobacterium IMCC1989 (1) | | | | | | | | | +--Idiomarinaceae bacterium AIT1 (1) | | | | | | | | | +--Psychromonadaceae (2) | | | | | | | | | | | +--Psychromonas ingrahamii 37 (1) | | | | | | | | | | | +--Psychromonas sp. CNPT3 (1) | | | | | | | | | +--Alteromonadaceae (27) | | | | | | | | | +--Marinobacter sp. BSs20148 (1) | | | | | | | | | +--Alteromonas halophila (1) | | | | | | | | | +--Marinimicrobium koreense (1) | | | | | | | | | +--Glaciecola sp. BSs20135 (1) | | | | | | | | | +--Agarivorans (1) | | | | | | | | | | | +--Agarivorans albus MKT 106 (1) | | | | | | | | | +--Alteromonas hispanica (1) | | | | | | | | | +--Paraglaciecola (1) | | | | | | | | | | | +--Paraglaciecola psychrophila 170 (1) | | | | | | | | | +--Alteromonas sp. H17 (1) | | | | | | | | | +--Marinobacterium nitratireducens (1) | | | | | | | | | +--Alishewanella (1) | | | | | | | | | | | +--Alishewanella agri BL06 (1) | | | | | | | | | +--Marinobacter mobilis (1) | | | | | | | | | +--Glaciecola (1) | | | | | | | | | | | +--Glaciecola punicea ACAM 611 (1) | | | | | | | | | +--Bowmanella sp. UDC354 (1) | | | | | | | | | +--Alteromonas confluentis (1) | | | | | | | | | +--Marinobacter sp. AC-23 (1) | | | | | | | | | +--Marinobacterium stanieri (1) | | | | | | | | | +--Catenovulum maritimum (1) | | | | | | | | | +--Aliiglaciecola (1) | | | | | | | | | | | +--Aliiglaciecola lipolytica E3 (1) | | | | | | | | | +--Aestuariibacter aggregatus (1) | | | | | | | | | +--Bowmanella pacifica (1) | | | | | | | | | +--Paraglaciecola sp. S66 (1) | | | | | | | | | +--Lacimicrobium alkaliphilum (1) | | | | | | | | | +--Catenovulum (1) | | | | | | | | | | | +--Catenovulum agarivorans DS-2 (1) | | | | | | | | | +--Marinobacterium sp. AN9 (1) | | | | | | | | | +--Marinobacter litoralis (1) | | | | | | | | | +--Alteromonas lipolytica (1) | | | | | | | | | +--Glaciecola nitratireducens FR1064 (1) | | | | | | | +--Alteromonadales bacterium MLST1 (1) | | | | | | | +--Celerinatantimonadaceae (1) | | | | | | | | | +--Celerinatantimonas diazotrophica (1) | | | | | | | +--Xanthomonadales (1) | | | | | | | | | +--Xanthomonadaceae (1) | | | | | | | | | +--Ignatzschineria ureiclastica (1) | | | | | | | +--Enterobacteriales (74) | | | | | | | | | +--primary endosymbiont of Sitophilus oryzae (1) | | | | | | | | | +--Enterobacteriaceae (73) | | | | | | | | | +--Serratia fonticola (1) | | | | | | | | | +--Dickeya dadantii 3937 (1) | | | | | | | | | +--Xenorhabdus japonica (1) | | | | | | | | | +--Cedecea neteri (1) | | | | | | | | | +--Leminorella richardii (1) | | | | | | | | | +--Salmonella (1) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1) | | | | | | | | | +--Pectobacterium atrosepticum SCRI1043 (1) | | | | | | | | | +--Arsenophonus endosymbiont of Aleurodicus dispersus (1) | | | | | | | | | +--Serratia rubidaea (1) | | | | | | | | | +--Escherichia coli K-12 (1) | | | | | | | | | +--Biostraticola tofi (1) | | | | | | | | | +--Shigella dysenteriae Sd197 (1) | | | | | | | | | +--Escherichia coli O83:H1 str. NRG 857C (1) | | | | | | | | | +--aphidsecondarysymbionts (3) | | | | | | | | | | | +--Candidatus Regiella insecticola R5.15 (1) | | | | | | | | | | | +--Candidatus Regiella insecticola LSR1 (1) | | | | | | | | | | | +--Hamiltonella endosymbiont of Bemisia tabaci (1) | | | | | | | | | +--Shigella sonnei Ss046 (1) | | | | | | | | | +--Escherichia coli O127:H6 str. E2348/69 (1) | | | | | | | | | +--Kluyvera cryocrescens (1) | | | | | | | | | +--Gibbsiella quercinecans (1) | | | | | | | | | +--Erwinia tasmaniensis (1) | | | | | | | | | +--Tatumella morbirosei (1) | | | | | | | | | +--Xenorhabdus koppenhoeferi (1) | | | | | | | | | +--Enterobacter gergoviae (1) | | | | | | | | | +--Escherichia coli APEC O1 (1) | | | | | | | | | +--Escherichia coli BL21(DE3) (1) | | | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (1) | | | | | | | | | +--Serratia ficaria (1) | | | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | | | +--Shigella flexneri 2a str. 301 (1) | | | | | | | | | +--Erwinia billingiae (1) | | | | | | | | | +--Edwardsiella hoshinae (1) | | | | | | | | | +--Citrobacter rodentium ICC168 (1) | | | | | | | | | +--Serratia (1) | | | | | | | | | | | +--Serratia symbiotica str. Tucson (1) | | | | | | | | | +--Escherichia blattae DSM 4481 (1) | | | | | | | | | +--Candidatus Ishikawaella capsulata Mpkobe (1) | | | | | | | | | +--Lonsdalea quercina (1) | | | | | | | | | +--Brenneria rubrifaciens (1) | | | | | | | | | +--Shigella boydii CDC 3083-94 (1) | | | | | | | | | +--Sodalis glossinidius str. 'morsitans' (1) | | | | | | | | | +--secondary endosymbiont of Heteropsylla cubana (1) | | | | | | | | | +--Serratia sp. ATCC 39006 (1) | | | | | | | | | +--Escherichia coli 55989 (1) | | | | | | | | | +--Trabulsiella odontotermitis (1) | | | | | | | | | +--Pantoea ananatis LMG 20103 (1) | | | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (1) | | | | | | | | | +--Escherichia coli E24377A (1) | | | | | | | | | +--Xenorhabdus innexi (1) | | | | | | | | | +--Escherichia coli O157:H7 (1) | | | | | | | | | +--Salmonella enterica subsp. arizonae (1) | | | | | | | | | +--Pantoea agglomerans (1) | | | | | | | | | +--Pantoea vagans (1) | | | | | | | | | +--Candidatus Moranella endobia PCIT (1) | | | | | | | | | +--Yersinia ruckeri (1) | | | | | | | | | +--Serratia odorifera DSM 4582 (1) | | | | | | | | | +--Budvicia aquatica (1) | | | | | | | | | +--Enterobacter sp. 638 (1) | | | | | | | | | +--Citrobacter freundii (1) | | | | | | | | | +--Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis) (1) | | | | | | | | | +--Xenorhabdus cabanillasii (1) | | | | | | | | | +--Escherichia coli HS (1) | | | | | | | | | +--Enterobacter (1) | | | | | | | | | | | +--Enterobacter cloacae SCF1 (1) | | | | | | | | | +--Citrobacter koseri ATCC BAA-895 (1) | | | | | | | | | +--Yersinia pestis CO92 (1) | | | | | | | | | +--Brenneria goodwinii (1) | | | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (1) | | | | | | | | | +--Candidatus Erwinia dacicola (1) | | | | | | | | | +--Erwinia mallotivora (1) | | | | | | | | | +--Providencia stuartii (1) | | | | | | | | | +--Escherichia coli S88 (1) | | | | | | | | | +--Erwinia tracheiphila (1) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Poona (1) | | | | | | | | | +--Klebsiella pneumoniae subsp. ozaenae (1) | | | | | | | +--Oceanospirillales (62) | | | | | | | | | +--Litoricolaceae (1) | | | | | | | | | | | +--Litoricola lipolytica (1) | | | | | | | | | +--Marinomonas aquimarina (1) | | | | | | | | | +--Oceanospirillum linum (1) | | | | | | | | | +--Oceanospirillaceae (9) | | | | | | | | | | | +--Motiliproteus sp. MSK22-1 (1) | | | | | | | | | | | +--Marinospirillum (1) | | | | | | | | | | | | | +--Marinospirillum alkaliphilum DSM 21637 (1) | | | | | | | | | | | +--Osedax symbiont Rs1 (1) | | | | | | | | | | | +--Osedax symbiont Rs2 (1) | | | | | | | | | | | +--Oleispira (1) | | | | | | | | | | | | | +--Oleispira antarctica RB-8 (1) | | | | | | | | | | | +--Marinobacterium sp. AK27 (1) | | | | | | | | | | | +--Marinomonas (1) | | | | | | | | | | | | | +--Marinomonas ushuaiensis DSM 15871 (1) | | | | | | | | | | | +--Thalassolituus (1) | | | | | | | | | | | | | +--Thalassolituus oleivorans MIL-1 (1) | | | | | | | | | | | +--Marinobacterium sp. ST58-10 (1) | | | | | | | | | +--Pseudospirillum japonicum (1) | | | | | | | | | +--Endozoicomonaceae (1) | | | | | | | | | | | +--Parendozoicomonas haliclonae (1) | | | | | | | | | +--Amphritea balenae (1) | | | | | | | | | +--unclassifiedOceanospirillales (1) | | | | | | | | | | | +--Oceanospirillales bacterium LUC14_002_19_P2 (1) | | | | | | | | | +--Oceanospirillum multiglobuliferum (1) | | | | | | | | | +--Oleibacter marinus (1) | | | | | | | | | +--Neptuniibacter caesariensis (1) | | | | | | | | | +--Alcanivoracaceae bacterium MOLA 115 (1) | | | | | | | | | +--Bermanella marisrubri (1) | | | | | | | | | +--Oleiphilaceae (1) | | | | | | | | | | | +--Oleiphilus messinensis (1) | | | | | | | | | +--Hahellaceae (4) | | | | | | | | | | | +--Endozoicomonas numazuensis (1) | | | | | | | | | | | +--Zooshikella ganghwensis (1) | | | | | | | | | | | +--Endozoicomonas elysicola (1) | | | | | | | | | | | +--Endozoicomonas montiporae (1) | | | | | | | | | +--Saccharospirillaceae (2) | | | | | | | | | | | +--Gynuella (1) | | | | | | | | | | | | | +--Gynuella sunshinyii YC6258 (1) | | | | | | | | | | | +--Saccharospirillum salsuginis (1) | | | | | | | | | +--Halomonadaceae (25) | | | | | | | | | | | +--Halomonas halmophila (1) | | | | | | | | | | | +--Chromohalobacter salexigens DSM 3043 (1) | | | | | | | | | | | +--Halomonas muralis (1) | | | | | | | | | | | +--Halomonas gudaonensis (1) | | | | | | | | | | | +--Halomonas variabilis (1) | | | | | | | | | | | +--Halomonas huangheensis (1) | | | | | | | | | | | +--Halomonas (2) | | | | | | | | | | | | | +--Halomonas ilicicola DSM 19980 (1) | | | | | | | | | | | | | +--Halomonas anticariensis FP35 = DSM 16096 (1) | | | | | | | | | | | +--Cobetia sp. UCD-24C (1) | | | | | | | | | | | +--Kushneria marisflavi (1) | | | | | | | | | | | +--Halomonas pacifica (1) | | | | | | | | | | | +--Halomonas sp. N12 (1) | | | | | | | | | | | +--Zymobactergroup (1) | | | | | | | | | | | | | +--Zymobacter palmae (1) | | | | | | | | | | | +--Halomonas subglaciescola (1) | | | | | | | | | | | +--Halomonas sp. 1513 (1) | | | | | | | | | | | +--Halomonas sp. A-1 (1) | | | | | | | | | | | +--Modicisalibacter sp. YIM 90637 (1) | | | | | | | | | | | +--Halomonas cerina (1) | | | | | | | | | | | +--Halomonas sp. BC04 (2) | | | | | | | | | | | +--Salinicola sp. MIT1003 (1) | | | | | | | | | | | +--Halomonas chromatireducens (1) | | | | | | | | | | | +--Halomonas alimentaria (1) | | | | | | | | | | | +--Halomonas taeanensis (1) | | | | | | | | | | | +--Halomonas beimenesis (1) | | | | | | | | | +--Marinomonas mediterranea MMB-1 (1) | | | | | | | | | +--Marinomonas sp. S3726 (1) | | | | | | | | | +--Alcanivoracaceae (5) | | | | | | | | | | | +--Alcanivorax sp. W11-5 (1) | | | | | | | | | | | +--Alcanivorax borkumensis SK2 (1) | | | | | | | | | | | +--Alcanivorax (1) | | | | | | | | | | | | | +--Alcanivorax dieselolei B5 (1) | | | | | | | | | | | +--Kangiella sp. YCS-5 (1) | | | | | | | | | | | +--Kangiella koreensis DSM 16069 (1) | | | | | | | | | +--Nitrincola lacisaponensis (1) | | | | | | | | | +--Neptunomonas sp. LHW37 (1) | | | | | | | +--Pseudomonadales (46) | | | | | | | | | +--Pseudomonadaceae (44) | | | | | | | | | | | +--Pseudomonas sp. M30-35 (1) | | | | | | | | | | | +--Pseudomonas salomonii (1) | | | | | | | | | | | +--Pseudomonas aeruginosa PAO1 (1) | | | | | | | | | | | +--Pseudomonas sp. StFLB209 (1) | | | | | | | | | | | +--Serpens flexibilis (1) | | | | | | | | | | | +--Pseudomonas jinjuensis (1) | | | | | | | | | | | +--Pseudomonas saudiphocaensis (1) | | | | | | | | | | | +--Pseudomonas fluorescens SBW25 (1) | | | | | | | | | | | +--Pseudomonas japonica (1) | | | | | | | | | | | +--Pseudomonas benzenivorans (1) | | | | | | | | | | | +--Pseudomonas stutzeri A1501 (1) | | | | | | | | | | | +--Pseudomonas sp. FeS53a (1) | | | | | | | | | | | +--Pseudomonas indica (1) | | | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (1) | | | | | | | | | | | +--Pseudomonas sp. M47T1 (1) | | | | | | | | | | | +--Pseudomonas sp. 21C1 (1) | | | | | | | | | | | +--Pseudomonas (3) | | | | | | | | | | | | | +--Pseudomonasaeruginosagroup (1) | | | | | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (1) | | | | | | | | | | | | | +--Pseudomonas knackmussii B13 (1) | | | | | | | | | | | | | +--Pseudomonas taeanensis MS-3 (1) | | | | | | | | | | | +--Pseudomonas graminis (1) | | | | | | | | | | | +--Pseudomonas oryzihabitans (1) | | | | | | | | | | | +--Pseudomonas fulva 12-X (1) | | | | | | | | | | | +--Pseudomonas asplenii (1) | | | | | | | | | | | +--Pseudomonas pachastrellae (1) | | | | | | | | | | | +--Oblitimonas alkaliphila (1) | | | | | | | | | | | +--Pseudomonas corrugata (1) | | | | | | | | | | | +--Pseudomonas fluorescens HK44 (1) | | | | | | | | | | | +--Pseudomonas xinjiangensis (1) | | | | | | | | | | | +--Pseudomonas panipatensis (1) | | | | | | | | | | | +--Pseudomonas putida KT2440 (1) | | | | | | | | | | | +--Cellvibrio japonicus Ueda107 (1) | | | | | | | | | | | +--Pseudomonas agarici (1) | | | | | | | | | | | +--Pseudomonas sp. TTU2014-080ASC (1) | | | | | | | | | | | +--Pseudomonas cremoricolorata (1) | | | | | | | | | | | +--Pseudomonas pohangensis (1) | | | | | | | | | | | +--Pseudomonas stutzeri (1) | | | | | | | | | | | +--Pseudomonas rhizosphaerae (1) | | | | | | | | | | | +--Pseudomonas sp. HPB0071 (1) | | | | | | | | | | | +--Pseudomonas sp. BZ93 (1) | | | | | | | | | | | +--Pseudomonas guineae (1) | | | | | | | | | | | +--Pseudomonas sp. BAY1663 (1) | | | | | | | | | | | +--Pseudomonas hussainii (1) | | | | | | | | | | | +--Azomonas agilis (1) | | | | | | | | | | | +--Azomonas macrocytogenes (1) | | | | | | | | | +--Moraxellaceae (2) | | | | | | | | | +--Acinetobacter (2) | | | | | | | | | +--Acinetobacter nectaris CIP 110549 (1) | | | | | | | | | +--Acinetobacter brisouii CIP 110357 (1) | | | | | | | +--Orbus hercynius (1) | | | | | | | +--Alkalimonas amylolytica (1) | | | | | | | +--Reinekea marinisedimentorum (1) | | | | | | | +--Vibrionales (37) | | | | | | | | | +--Vibrionaceae (37) | | | | | | | | | +--Vibrio sp. R-40493 (1) | | | | | | | | | +--Photobacterium lipolyticum (1) | | | | | | | | | +--Candidatus Photodesmus blepharus (1) | | | | | | | | | +--Vibrio navarrensis (1) | | | | | | | | | +--Vibrio caribbenthicus ATCC BAA-2122 (1) | | | | | | | | | +--Vibrio cholerae O1 biovar El Tor str. N16961 (1) | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | +--Vibrio sp. F10 (1) | | | | | | | | | +--Vibrio fischeri ES114 (1) | | | | | | | | | +--Photobacterium halotolerans (1) | | | | | | | | | +--Photobacterium sp. CECT 7614 (1) | | | | | | | | | +--Vibrio (6) | | | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | | | +--Vibrioharveyigroup (1) | | | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (1) | | | | | | | | | | | +--Vibrio ezurae NBRC 102218 (1) | | | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | | | | | +--Vibrio aerogenes CECT 7868 (1) | | | | | | | | | +--Grimontia hollisae CIP 101886 (1) | | | | | | | | | +--Enterovibrio sp. sw014 (1) | | | | | | | | | +--Photobacterium damselae subsp. damselae CIP 102761 (1) | | | | | | | | | +--Vibrio palustris (1) | | | | | | | | | +--Photobacterium jeanii (1) | | | | | | | | | +--Vibrio sp. G21 (1) | | | | | | | | | +--Vibrio furnissii (1) | | | | | | | | | +--Vibrio sp. qd031 (1) | | | | | | | | | +--Photobacterium profundum SS9 (1) | | | | | | | | | +--Photobacterium sp. Gung47 (1) | | | | | | | | | +--Enterovibrio coralii (1) | | | | | | | | | +--Vibrio sp. S2757 (1) | | | | | | | | | +--Vibrio nigripulchritudo (1) | | | | | | | | | +--Photobacterium ganghwense (1) | | | | | | | | | +--Vibrio nereis (1) | | | | | | | | | +--Vibrio renipiscarius (1) | | | | | | | | | +--Salinivibrio sp. KP-1 (1) | | | | | | | | | +--Vibrio ishigakensis (1) | | | | | | | | | +--Vibrio parahaemolyticus RIMD 2210633 (1) | | | | | | | | | +--Photobacterium aquimaris (1) | | | | | | | +--Cellvibrionales (2) | | | | | | | | | +--Cellvibrionaceae (1) | | | | | | | | | | | +--Simiduia (1) | | | | | | | | | | | +--Simiduia agarivorans SA1 = DSM 21679 (1) | | | | | | | | | +--Halieaceae (1) | | | | | | | | | +--Halioglobus sp. HI00S01 (1) | | | | | | | +--Thiotrichales (3) | | | | | | | | | +--Thiotrichaceae (2) | | | | | | | | | | | +--Cocleimonas flava (1) | | | | | | | | | | | +--Thiothrix eikelboomii (1) | | | | | | | | | +--Piscirickettsiaceae (1) | | | | | | | | | +--Hydrogenovibrio marinus (1) | | | | | | | +--Umboniibacter marinipuniceus (1) | | | | | | | +--Chromatiales (8) | | | | | | | | | +--Chromatiaceae (8) | | | | | | | | | +--Candidatus Tenderia electrophaga (1) | | | | | | | | | +--Pararheinheimera mesophila (1) | | | | | | | | | +--Rheinheimera sp. E407-8 (1) | | | | | | | | | +--Rheinheimera sp. SA_1 (1) | | | | | | | | | +--Rheinheimera sp. F8 (2) | | | | | | | | | +--Arsukibacterium sp. MJ3 (2) | | | | | | | +--Candidatus Baumannia cicadellinicola (1) | | | | | +--Betaproteobacteria (33) | | | | | | | +--unclassifiedBetaproteobacteria (1) | | | | | | | | | +--Candidatus Accumulibacter sp. BA-93 (1) | | | | | | | +--Methylophilales (1) | | | | | | | | | +--Methylophilaceae (1) | | | | | | | | | +--Methylobacillus flagellatus KT (1) | | | | | | | +--Burkholderiales (2) | | | | | | | | | +--Burkholderiaceae (1) | | | | | | | | | | | +--Polynucleobacter sp. VK13 (1) | | | | | | | | | +--Oxalobacteraceae (1) | | | | | | | | | +--Herminiimonas arsenicoxydans (1) | | | | | | | +--Rhodocyclales (1) | | | | | | | | | +--Rhodocyclaceae (1) | | | | | | | | | +--Dechloromonas denitrificans (1) | | | | | | | +--Neisseriales (28) | | | | | | | +--Chromobacteriaceae (3) | | | | | | | | | +--Vogesella sp. EB (1) | | | | | | | | | +--Chromobacteriumgroup (1) | | | | | | | | | | | +--Chromobacterium sp. LK11 (1) | | | | | | | | | +--Vogesella sp. LIG4 (1) | | | | | | | +--Neisseriaceae (25) | | | | | | | +--Kingella kingae ATCC 23330 (1) | | | | | | | +--Neisseria weaveri (1) | | | | | | | +--Morococcus cerebrosus (1) | | | | | | | +--Simonsiella muelleri ATCC 29453 (1) | | | | | | | +--Neisseria animalis (1) | | | | | | | +--Neisseria sp. oral taxon 014 str. F0314 (1) | | | | | | | +--Alysiella crassa (1) | | | | | | | +--Vitreoscilla sp. C1 (1) | | | | | | | +--Conchiformibius steedae (1) | | | | | | | +--Neisseria gonorrhoeae FA 1090 (1) | | | | | | | +--Neisseria mucosa ATCC 25996 (1) | | | | | | | +--Neisseria canis (1) | | | | | | | +--Neisseria meningitidis MC58 (1) | | | | | | | +--Neisseria sicca (1) | | | | | | | +--Conchiformibius kuhniae (1) | | | | | | | +--Neisseria sp. 10023 (1) | | | | | | | +--Kingella denitrificans ATCC 33394 (1) | | | | | | | +--Bergeriella denitrificans (1) | | | | | | | +--Neisseria dentiae (1) | | | | | | | +--Neisseria elongata subsp. glycolytica ATCC 29315 (1) | | | | | | | +--Neisseria shayeganii 871 (1) | | | | | | | +--Neisseria arctica (1) | | | | | | | +--Snodgrassella alvi (1) | | | | | | | +--Neisseria animaloris (1) | | | | | | | +--Chromobacterium violaceum ATCC 12472 (1) | | | | | +--gamma proteobacterium HTCC5015 (1) | | | | | +--gamma proteobacterium sw-11 (1) | | | +--Spirochaetes (1) | | | | | +--Spirochaetales (1) | | | | | +--Spirochaetaceae (1) | | | | | +--Treponema succinifaciens DSM 2489 (1) | | | +--Campylobacterota (5) | | | | | +--Epsilonproteobacteria (5) | | | | | +--Campylobacterales (5) | | | | | +--Campylobacteraceae (4) | | | | | | | +--Campylobacter massiliensis (1) | | | | | | | +--Campylobacter (3) | | | | | | | +--Campylobacter mucosalis CCUG 21559 (1) | | | | | | | +--Campylobacter sp. RM16192 (1) | | | | | | | +--Campylobacter sp. MIT 12-5580 (1) | | | | | +--Sulfurimonadaceae (1) | | | | | +--Sulfurimonas marina (1) | | | +--Firmicutes (3) | | | | | +--Lactobacillales (3) | | | | | +--Carnobacteriaceae (1) | | | | | | | +--Agitococcus lubricus (1) | | | | | +--Weissella kandleri (1) | | | | | +--Lactobacillaceae (1) | | | | | +--Sharpea azabuensis (1) | | | +--Pseudomonadota (277) | | | | | +--Proteobacteria bacterium 228 (1) | | | | | +--Gammaproteobacteria (258) | | | | | | | +--Kangiellales (2) | | | | | | | | | +--Kangiellaceae (2) | | | | | | | | | +--Kangiella (1) | | | | | | | | | | | +--Kangiella sp. HZ709 (1) | | | | | | | | | +--Kangiellaceae bacterium (1) | | | | | | | +--Pasteurellales (8) | | | | | | | | | +--Psittacicellaceae (2) | | | | | | | | | | | +--Psittacicella hinzii (1) | | | | | | | | | | | +--Psittacicella melopsittaci (1) | | | | | | | | | +--Pasteurellaceae (6) | | | | | | | | | +--Cricetibacter osteomyelitidis (1) | | | | | | | | | +--Vespertiliibacter pulmonis (1) | | | | | | | | | +--Mesocricetibacter intestinalis (1) | | | | | | | | | +--Rodentibacter trehalosifermentans (1) | | | | | | | | | +--Mannheimia (1) | | | | | | | | | | | +--Mannheimia varigena USDA-ARS-USMARC-1296 (1) | | | | | | | | | +--Pasteurellaceae bacterium RH1A (1) | | | | | | | +--Enterobacterales (46) | | | | | | | | | +--Yersiniaceae (3) | | | | | | | | | | | +--Rouxiella badensis (1) | | | | | | | | | | | +--Chimaeribacter arupi (1) | | | | | | | | | | | +--Candidatus Fukatsuia symbiotica (1) | | | | | | | | | +--Enterobacteriaceae (11) | | | | | | | | | | | +--Kosakonia (1) | | | | | | | | | | | | | +--Kosakonia cowanii JCM 10956 = DSM 18146 (1) | | | | | | | | | | | +--Jejubacter calystegiae (1) | | | | | | | | | | | +--Candidatus Profftia tarda (1) | | | | | | | | | | | +--Tenebrionibacter/Tenebrionicolagroup (1) | | | | | | | | | | | | | +--Tenebrionibacter intestinalis (1) | | | | | | | | | | | +--Citrobacter (1) | | | | | | | | | | | | | +--Citrobacter sp. JGM124 (1) | | | | | | | | | | | +--Kluyvera genomosp. 3 (1) | | | | | | | | | | | +--Klebsiella/Raoultellagroup (2) | | | | | | | | | | | | | +--Klebsiella (1) | | | | | | | | | | | | | | | +--Klebsiellapneumoniae (1) | | | | | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) (1) | | | | | | | | | | | | | +--Klebsiella indica (1) | | | | | | | | | | | +--Enterobacteriaceae bacterium RIT714 (1) | | | | | | | | | | | +--Enterobacteriaceaeincertaesedis (2) | | | | | | | | | | | +--ant,tsetse,mealybug,aphid,etc.endosymbionts (2) | | | | | | | | | | | +--Symbiopectobacterium (2) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. Dall1.0 (1) | | | | | | | | | | | +--Candidatus Symbiopectobacterium sp. PLON1 (1) | | | | | | | | | +--Enterobacterales bacterium CwR94 (1) | | | | | | | | | +--Thorselliaceae (1) | | | | | | | | | | | +--Thorsellia (1) | | | | | | | | | | | +--Thorsellia anophelis DSM 18579 (1) | | | | | | | | | +--Hafniaceae (1) | | | | | | | | | | | +--Enterobacillus tribolii (1) | | | | | | | | | +--Pectobacteriaceae (3) | | | | | | | | | | | +--Affinibrenneria salicis (2) | | | | | | | | | | | +--Acerihabitans arboris (1) | | | | | | | | | +--Morganellaceae (6) | | | | | | | | | | | +--Providencia (1) | | | | | | | | | | | | | +--Providencia heimbachae ATCC 35613 (1) | | | | | | | | | | | +--Proteus (1) | | | | | | | | | | | | | +--Proteus myxofaciens ATCC 19692 (1) | | | | | | | | | | | +--Arsenophonus (4) | | | | | | | | | | | +--Arsenophonus endosymbiont of Aphis craccivora (1) | | | | | | | | | | | +--Arsenophonus sp. ENCA (1) | | | | | | | | | | | +--unclassifiedArsenophonus (1) | | | | | | | | | | | | | +--Arsenophonus endosymbiont of Bemisia tabaci Q2 (1) | | | | | | | | | | | +--Arsenophonus endosymbiont of Aleurodicus floccissimus (1) | | | | | | | | | +--Budviciaceae (1) | | | | | | | | | | | +--Limnobaculum parvum (1) | | | | | | | | | +--Erwiniaceae (13) | | | | | | | | | | | +--Candidatus Erwinia haradaeae (1) | | | | | | | | | | | +--Erwinia sorbitola (1) | | | | | | | | | | | +--Pantoea (5) | | | | | | | | | | | | | +--Pantoea sp. M_5 (2) | | | | | | | | | | | | | +--Pantoea sp. Nvir (1) | | | | | | | | | | | | | +--Pantoea sp. Eser (1) | | | | | | | | | | | | | +--Pantoea sp. Mhis (1) | | | | | | | | | | | +--Pantoea alhagi (1) | | | | | | | | | | | +--Izhakiella capsodis (1) | | | | | | | | | | | +--Erwiniaceae bacterium PD-1 (1) | | | | | | | | | | | +--Erwinia (2) | | | | | | | | | | | | | +--Erwinia sp. 198 (1) | | | | | | | | | | | | | +--Erwinia sp. OLSSP12 (1) | | | | | | | | | | | +--[Pantoea] beijingensis (1) | | | | | | | | | +--Bruguierivoracaceae (6) | | | | | | | | | +--Sodalis ligni (1) | | | | | | | | | +--Sodalis (5) | | | | | | | | | +--Sodalis-like endosymbiont of Proechinophthirus fluctus (1) | | | | | | | | | +--Sodalis-like symbiont of Bactericera trigonica (1) | | | | | | | | | +--Sodalis sp. Fse (1) | | | | | | | | | +--Sodalis endosymbiont of Henestaris halophilus (1) | | | | | | | | | +--Sodalis-like symbiont of Philaenus spumarius (1) | | | | | | | +--Aeromonadales (2) | | | | | | | | | +--Aeromonadaceae (1) | | | | | | | | | | | +--Oceanisphaera avium (1) | | | | | | | | | +--Succinivibrionaceae (1) | | | | | | | | | +--Succinivibrio (1) | | | | | | | | | +--Succinivibrio dextrinosolvens DSM 3072 (1) | | | | | | | +--Orbales (1) | | | | | | | | | +--Orbaceae (1) | | | | | | | | | +--Zophobihabitans entericus (1) | | | | | | | +--Legionellales (2) | | | | | | | | | +--Legionellaceae (2) | | | | | | | | | +--Legionella (1) | | | | | | | | | | | +--Legionella sp. km772 (1) | | | | | | | | | +--Legionella antarctica (1) | | | | | | | +--Alteromonadales (70) | | | | | | | | | +--Alteromonadalesgeneraincertaesedis (1) | | | | | | | | | | | +--Motilimonas pumila (1) | | | | | | | | | +--Colwelliaceae (12) | | | | | | | | | | | +--Thalassotalea (2) | | | | | | | | | | | | | +--Thalassotalea sp. HSM 43 (1) | | | | | | | | | | | | | +--Thalassotalea sp. LPB0316 (1) | | | | | | | | | | | +--Colwellia ponticola (1) | | | | | | | | | | | +--Thalassotalea mangrovi (1) | | | | | | | | | | | +--Litorilituus lipolyticus (1) | | | | | | | | | | | +--Thalassotalea algicola (1) | | | | | | | | | | | +--Thalassotalea euphylliae (1) | | | | | | | | | | | +--Thalassotalea piscium (1) | | | | | | | | | | | +--Colwellia (2) | | | | | | | | | | | | | +--Colwellia sp. 12G3 (1) | | | | | | | | | | | | | +--Colwellia sp. C1TZA3 (1) | | | | | | | | | | | +--Thalassotalea marina (1) | | | | | | | | | | | +--Thalassomonas (1) | | | | | | | | | | | +--Thalassomonas sp. M1454 (1) | | | | | | | | | +--Ferrimonadaceae (4) | | | | | | | | | | | +--Ferrimonas aestuarii (1) | | | | | | | | | | | +--Ferrimonas sediminicola (1) | | | | | | | | | | | +--Ferrimonas lipolytica (1) | | | | | | | | | | | +--Paraferrimonas haliotis (1) | | | | | | | | | +--Pseudoalteromonadaceae (5) | | | | | | | | | | | +--Psychrosphaera ytuae (1) | | | | | | | | | | | +--Pseudoalteromonas (4) | | | | | | | | | | | +--Pseudoalteromonas sp. NBT06-2 (1) | | | | | | | | | | | +--Pseudoalteromonas sp. NC201 (1) | | | | | | | | | | | +--Pseudoalteromonas denitrificans DSM 6059 (1) | | | | | | | | | | | +--Pseudoalteromonas luteoviolacea DSM 6061 (1) | | | | | | | | | +--Shewanellaceae (7) | | | | | | | | | | | +--Parashewanella curva (1) | | | | | | | | | | | +--Shewanella aestuarii (1) | | | | | | | | | | | +--Shewanella salipaludis (1) | | | | | | | | | | | +--Shewanella gelidii (1) | | | | | | | | | | | +--Shewanella (2) | | | | | | | | | | | | | +--Shewanella sp. SNU WT4 (1) | | | | | | | | | | | | | +--Shewanella sp. XMDDZSB0408 (1) | | | | | | | | | | | +--Shewanella cyperi (1) | | | | | | | | | +--Alteromonadales bacterium alter-6D02 (1) | | | | | | | | | +--Idiomarinaceae (7) | | | | | | | | | | | +--Pseudidiomarina piscicola (1) | | | | | | | | | | | +--Aliidiomarina sanyensis (1) | | | | | | | | | | | +--Aliidiomarina soli (1) | | | | | | | | | | | +--Aliidiomarina haloalkalitolerans (1) | | | | | | | | | | | +--Idiomarina (1) | | | | | | | | | | | | | +--Idiomarina sp. MD25a (1) | | | | | | | | | | | +--Idiomarina tyrosinivorans (1) | | | | | | | | | | | +--Pseudidiomarina indica (1) | | | | | | | | | +--Moritellaceae (1) | | | | | | | | | | | +--Moritella (1) | | | | | | | | | | | +--Moritella sp. Urea-trap-13 (1) | | | | | | | | | +--Echinimonadaceae (2) | | | | | | | | | | | +--Neiella litorisoli (1) | | | | | | | | | | | +--Echinimonas agarilytica (1) | | | | | | | | | +--Psychromonadaceae (6) | | | | | | | | | | | +--Corallincola holothuriorum (1) | | | | | | | | | | | +--Psychromonas (5) | | | | | | | | | | | +--Psychromonas sp. B3M02 (1) | | | | | | | | | | | +--Psychromonas sp. psych-6C06 (1) | | | | | | | | | | | +--Psychromonas sp. RZ22 (1) | | | | | | | | | | | +--Psychromonas sp. RZ5 (1) | | | | | | | | | | | +--Psychromonas sp. Urea-02u-13 (1) | | | | | | | | | +--Alteromonadaceae (24) | | | | | | | | | +--Saccharobesus litoralis (1) | | | | | | | | | +--Alkalimarinus sediminis (1) | | | | | | | | | +--Aliiglaciecola (1) | | | | | | | | | | | +--Aliiglaciecola sp. M165 (1) | | | | | | | | | +--Agaribacter marinus (1) | | | | | | | | | +--Hydrocarboniclastica marina (1) | | | | | | | | | +--Alteromonadaceae bacterium M269 (1) | | | | | | | | | +--Bowmanella (1) | | | | | | | | | | | +--Bowmanella sp. JS7-9 (1) | | | | | | | | | +--Saliniradius amylolyticus (1) | | | | | | | | | +--Paraglaciecola (2) | | | | | | | | | | | +--Paraglaciecola mesophila KMM 241 (1) | | | | | | | | | | | +--Paraglaciecola sp. MB-3u-78 (1) | | | | | | | | | +--Opacimonas viscosa (1) | | | | | | | | | +--Alteromonadaceae bacterium (1) | | | | | | | | | +--Neptunicella marina (1) | | | | | | | | | +--Alginatibacterium sediminis (1) | | | | | | | | | +--Glaciecola (1) | | | | | | | | | | | +--Glaciecola sp. (strain KUL10) (1) | | | | | | | | | +--Alteromonas/Salinimonasgroup (9) | | | | | | | | | +--Alteromonas (4) | | | | | | | | | | | +--Alteromonas sp. KUL42 (1) | | | | | | | | | | | +--Alteromonas sp. V450 (1) | | | | | | | | | | | +--Alteromonas sp. 5E99-2 (1) | | | | | | | | | | | +--Alteromonas sp. KUL49 (1) | | | | | | | | | +--Salinimonas marina (1) | | | | | | | | | +--Salinimonas iocasae (1) | | | | | | | | | +--Alteromonas sediminis (1) | | | | | | | | | +--Alteromonas pelagimontana (1) | | | | | | | | | +--Alteromonas aestuariivivens (1) | | | | | | | +--Gammaproteobacteria bacterium ESL0073 (1) | | | | | | | +--Xanthomonadales (2) | | | | | | | | | +--Xanthomonadales bacterium (1) | | | | | | | | | +--Xanthomonadaceae (1) | | | | | | | | | +--Lysobacter (1) | | | | | | | | | +--Lysobacter sp. N42 (1) | | | | | | | +--Oceanospirillales (44) | | | | | | | | | +--Natronospirillaceae (1) | | | | | | | | | | | +--Natronospirillum operosum (1) | | | | | | | | | +--Endozoicomonadaceae (1) | | | | | | | | | | | +--Endozoicomonas (1) | | | | | | | | | | | +--Endozoicomonas sp. G2_1 (1) | | | | | | | | | +--Aestuariirhabdaceae (1) | | | | | | | | | | | +--Aestuariirhabdus litorea (1) | | | | | | | | | +--Oceanospirillaceae (17) | | | | | | | | | | | +--Marinospirillum celere (1) | | | | | | | | | | | +--Marinomonas piezotolerans (1) | | | | | | | | | | | +--Oceanospirillaceae bacterium (1) | | | | | | | | | | | +--Maribrevibacterium harenarium (1) | | | | | | | | | | | +--Amphritea (1) | | | | | | | | | | | | | +--Amphritea japonica ATCC BAA-1530 (1) | | | | | | | | | | | +--Neptunomonas marina (1) | | | | | | | | | | | +--Oceanospirillum sediminis (1) | | | | | | | | | | | +--Nitrincola tapanii (1) | | | | | | | | | | | +--Marinobacterium (2) | | | | | | | | | | | | | +--Marinobacterium sp. LSUCC0821 (1) | | | | | | | | | | | | | +--Marinobacterium iners DSM 11526 (1) | | | | | | | | | | | +--Bacterioplanoides (1) | | | | | | | | | | | | | +--Bacterioplanoides sp. SCSIO 12839 (1) | | | | | | | | | | | +--Pontibacterium sinense (1) | | | | | | | | | | | +--Parathalassolituus penaei (1) | | | | | | | | | | | +--Nitrincola tibetensis (1) | | | | | | | | | | | +--Litoribrevibacter albus (1) | | | | | | | | | | | +--Motiliproteus coralliicola (1) | | | | | | | | | | | +--Marinobacterium marinum (1) | | | | | | | | | +--Pleioneaceae (2) | | | | | | | | | | | +--Aliikangiella coralliicola (1) | | | | | | | | | | | +--Aliikangiella marina (1) | | | | | | | | | +--Oleiphilaceae (4) | | | | | | | | | | | +--Oleiphilus (4) | | | | | | | | | | | +--Oleiphilus sp. HI0066 (2) | | | | | | | | | | | +--Oleiphilus sp. HI0079 (1) | | | | | | | | | | | +--Oleiphilus sp. HI0043 (1) | | | | | | | | | +--Hahellaceae (1) | | | | | | | | | | | +--Hahella (1) | | | | | | | | | | | +--Hahella sp. CCB-MM4 (1) | | | | | | | | | +--Saccharospirillaceae (3) | | | | | | | | | | | +--Reinekea thalattae (1) | | | | | | | | | | | +--Saccharospirillum (1) | | | | | | | | | | | | | +--Saccharospirillum sp. MSK14-1 (1) | | | | | | | | | | | +--Reinekea forsetii (1) | | | | | | | | | +--Oceanospirillalesincertaesedis (1) | | | | | | | | | | | +--Pelagibaculum spongiae (1) | | | | | | | | | +--Halomonadaceae (12) | | | | | | | | | | | +--Halomonas zhuhanensis (1) | | | | | | | | | | | +--Halomonas azerica (1) | | | | | | | | | | | +--Halomonas salicampi (1) | | | | | | | | | | | +--Larsenimonas rhizosphaerae (1) | | | | | | | | | | | +--Halomonas (4) | | | | | | | | | | | | | +--Halomonas sp. PA5 (1) | | | | | | | | | | | | | +--Halomonas sp. YLB-10 (1) | | | | | | | | | | | | | +--Halomonas sp. DQ26W (1) | | | | | | | | | | | | | +--Halomonas sp. GFAJ-1 (1) | | | | | | | | | | | +--Halomonas urumqiensis (1) | | | | | | | | | | | +--Halomonas heilongjiangensis (1) | | | | | | | | | | | +--Halomonas nanhaiensis (1) | | | | | | | | | | | +--Pistricoccus aurantiacus (1) | | | | | | | | | +--Alcanivoracaceae (1) | | | | | | | | | +--Alloalcanivorax marinus (1) | | | | | | | +--Pseudomonadales (37) | | | | | | | | | +--Ketobacteraceae (2) | | | | | | | | | | | +--Ketobacter (1) | | | | | | | | | | | | | +--Ketobacter sp. (1) | | | | | | | | | | | +--Ketobacter alkanivorans (1) | | | | | | | | | +--Pseudohongiellaceae (1) | | | | | | | | | | | +--Pseudohongiella nitratireducens (1) | | | | | | | | | +--Marinobacteraceae (2) | | | | | | | | | | | +--Marinobacter profundi (1) | | | | | | | | | | | +--Marinobacter vulgaris (1) | | | | | | | | | +--Pseudomonadaceae (32) | | | | | | | | | +--Permianibacter aggregans (1) | | | | | | | | | +--Pseudomonas guangdongensis (1) | | | | | | | | | +--Entomomonas asaccharolytica (1) | | | | | | | | | +--Halopseudomonas salegens (1) | | | | | | | | | +--Pseudomonas oryzae (1) | | | | | | | | | +--Pseudomonas mangrovi (1) | | | | | | | | | +--Pseudomonas cavernae (1) | | | | | | | | | +--Pseudomonas kuykendallii (1) | | | | | | | | | +--Halopseudomonas phragmitis (1) | | | | | | | | | +--Pseudomonas matsuisoli (1) | | | | | | | | | +--Halopseudomonas laoshanensis (1) | | | | | | | | | +--Azotobactergroup (1) | | | | | | | | | | | +--Azotobacter (1) | | | | | | | | | | | +--Azotobacter chroococcum NCIMB 8003 (1) | | | | | | | | | +--Stutzerimonas nosocomialis (1) | | | | | | | | | +--Pseudomonas mangiferae (1) | | | | | | | | | +--Pseudomonas pharmacofabricae (1) | | | | | | | | | +--Halopseudomonas yangmingensis (1) | | | | | | | | | +--Pseudomonas (15) | | | | | | | | | | | +--Pseudomonas sp. URIL14HWK12:I9 (1) | | | | | | | | | | | +--Pseudomonas sp. HLS-6 (1) | | | | | | | | | | | +--Pseudomonas sp. OIL-1 (1) | | | | | | | | | | | +--Pseudomonas sp. ABC1 (1) | | | | | | | | | | | +--Pseudomonas sp. MRSN 12121 (1) | | | | | | | | | | | +--Pseudomonas sp. SSM44 (1) | | | | | | | | | | | +--Pseudomonas sp. Boi14 (1) | | | | | | | | | | | +--Pseudomonas sp. GD03985 (1) | | | | | | | | | | | +--Pseudomonas sp. 1239 (1) | | | | | | | | | | | +--Pseudomonas sp. HAR-UPW-AIA-41 (1) | | | | | | | | | | | +--Pseudomonas sp. v388 (1) | | | | | | | | | | | +--Pseudomonas sp. THAF187a (1) | | | | | | | | | | | +--Pseudomonas sp. GV071 (1) | | | | | | | | | | | +--Pseudomonas sp. 8AS (1) | | | | | | | | | | | +--Pseudomonas sp. SDI (1) | | | | | | | | | +--Pseudomonas carbonaria (1) | | | | | | | +--Moraxellales (2) | | | | | | | | | +--Moraxellaceae (2) | | | | | | | | | +--Aquirhabdus parva (1) | | | | | | | | | +--Fluviicoccus keumensis (1) | | | | | | | +--Vibrionales (21) | | | | | | | | | +--Vibrionaceae (21) | | | | | | | | | +--Vibrio thalassae (1) | | | | | | | | | +--Vibrio viridaestus (1) | | | | | | | | | +--Vibrio agarilyticus (1) | | | | | | | | | +--Vibrio toranzoniae (1) | | | | | | | | | +--Vibrio paucivorans (1) | | | | | | | | | +--Vibrio aquimaris (1) | | | | | | | | | +--Vibrio gelatinilyticus (1) | | | | | | | | | +--Vibrio eleionomae (1) | | | | | | | | | +--Vibrio ziniensis (1) | | | | | | | | | +--Candidatus Enterovibrio luxaltus (1) | | | | | | | | | +--Vibrio ostreae (1) | | | | | | | | | +--Veronia nyctiphanis (1) | | | | | | | | | +--Vibrio astriarenae (1) | | | | | | | | | +--Vibrio (6) | | | | | | | | | | | +--Vibrio sp. 99-8-1 (1) | | | | | | | | | | | +--Vibrio tapetis subsp. tapetis (1) | | | | | | | | | | | +--Vibrio sp. V28_P6S34P95 (1) | | | | | | | | | | | +--Vibrio sp. HA2012 (1) | | | | | | | | | | | +--Vibrio ruber DSM 16370 (1) | | | | | | | | | | | +--Vibrio sp. 10N.286.49.B3 (1) | | | | | | | | | +--Candidatus Enterovibrio escacola (1) | | | | | | | | | +--Paraphotobacterium marinum (1) | | | | | | | +--Cellvibrionales (15) | | | | | | | | | +--Cellvibrionaceae (9) | | | | | | | | | | | +--Aestuariicella hydrocarbonica (1) | | | | | | | | | | | +--Simiduia aestuariiviva (1) | | | | | | | | | | | +--Pseudomaricurvus (1) | | | | | | | | | | | | | +--Pseudomaricurvus sp. HS19 (1) | | | | | | | | | | | +--Cellvibrio (3) | | | | | | | | | | | | | +--Cellvibrio sp. PSBB006 (1) | | | | | | | | | | | | | +--Cellvibrio sp. KY-GH-1 (1) | | | | | | | | | | | | | +--Cellvibrio sp. PSBB023 (1) | | | | | | | | | | | +--Gilvimarinus (1) | | | | | | | | | | | | | +--Gilvimarinus sp. DA14 (1) | | | | | | | | | | | +--Cellvibrio polysaccharolyticus (1) | | | | | | | | | | | +--Marinibactrum halimedae (1) | | | | | | | | | +--Halieaceae (3) | | | | | | | | | | | +--Parahaliea aestuarii (1) | | | | | | | | | | | +--Seongchinamella unica (1) | | | | | | | | | | | +--Pseudohalioglobus lutimaris (1) | | | | | | | | | +--Porticoccaceae (2) | | | | | | | | | | | +--Gammaproteobacteria bacterium MOLA455 (1) | | | | | | | | | | | +--unclassifiedPorticoccaceae (1) | | | | | | | | | | | +--Gammaproteobacteria bacterium LSUCC0057 (1) | | | | | | | | | +--Spongiibacteraceae (1) | | | | | | | | | +--unclassifiedSpongiibacteraceae (1) | | | | | | | | | +--BD1-7 clade bacterium (1) | | | | | | | +--Chromatiales (2) | | | | | | | | | +--Chromatiaceae (2) | | | | | | | | | +--Rheinheimera salexigens (1) | | | | | | | | | +--Rheinheimera (1) | | | | | | | | | +--Rheinheimera sp. D18 (1) | | | | | | | +--Thiotrichales (3) | | | | | | | +--Thiotrichaceae (2) | | | | | | | | | +--Leucothrix pacifica (1) | | | | | | | | | +--Leucothrix arctica (1) | | | | | | | +--Piscirickettsiaceae (1) | | | | | | | +--Thiosulfatimonas sediminis (1) | | | | | +--Betaproteobacteria (18) | | | | | +--Burkholderiales (3) | | | | | | | +--Burkholderiaceae (1) | | | | | | | | | +--Formosimonas limnophila (1) | | | | | | | +--Oxalobacteraceae (2) | | | | | | | +--Undibacterium (1) | | | | | | | | | +--Undibacterium sp. KW1 (1) | | | | | | | +--Solimicrobium silvestre (1) | | | | | +--Ferrovales (1) | | | | | | | +--Ferrovaceae (1) | | | | | | | +--Ferrovum (1) | | | | | | | +--Ferrovum sp. PN-J185 (1) | | | | | +--Rhodocyclales (1) | | | | | | | +--Azonexaceae (1) | | | | | | | +--Dechloromonas (1) | | | | | | | +--Dechloromonas sp. TW-R-39-2 (1) | | | | | +--Neisseriales (11) | | | | | | | +--Chromobacteriaceae (1) | | | | | | | | | +--Paludibacterium purpuratum (1) | | | | | | | +--Neisseriaceae (7) | | | | | | | | | +--Eikenella (1) | | | | | | | | | | | +--Eikenella corrodens CC92I (1) | | | | | | | | | +--Kingella negevensis (1) | | | | | | | | | +--Paralysiella testudinis (1) | | | | | | | | | +--Craterilacuibacter sinensis (1) | | | | | | | | | +--Alysiella (1) | | | | | | | | | | | +--Alysiella filiformis DSM 16848 (1) | | | | | | | | | +--Aquella oligotrophica (1) | | | | | | | | | +--Neisseria (1) | | | | | | | | | +--Neisseria sp. 51.81 (1) | | | | | | | +--Chitinibacteraceae (3) | | | | | | | +--Chitinibacter fontanus (1) | | | | | | | +--Chitinimonas (1) | | | | | | | | | +--Chitinimonas sp. BJB300 (1) | | | | | | | +--Chitinimonas arctica (1) | | | | | +--Nitrosomonadales (2) | | | | | +--Gallionellaceae (1) | | | | | | | +--Nitrotoga (1) | | | | | | | +--Candidatus Nitrotoga sp. AM1P (1) | | | | | +--Sulfuricellaceae (1) | | | | | +--Sulfuriferula (1) | | | | | +--Sulfuriferula sp. AH1 (1) | | | +--Terrabacteriagroup (2) | | | +--Firmicutes (2) | | | +--Bacilli (1) | | | | | +--Lactobacillales (1) | | | | | +--Lactobacillaceae (1) | | | | | +--Lactobacillus (1) | | | | | +--Lactobacillus oligofermentans DSM 15707 = LMG 22743 (1) | | | +--Erysipelotrichia (1) | | | +--Erysipelotrichales (1) | | | +--Erysipelotrichaceae (1) | | | +--Catenibacterium (1) | | | +--Catenibacterium sp. CAG:290 (1) | +--Plautia stali symbiont (1)