INFERNAL1/a [1.1 | October 2013] NAME k-turn-1 DESC Kink turn, 3' bulge STATES 115 NODES 30 CLEN 37 W 716 ALPH RNA RF no CONS yes MAP yes DATE Fri May 30 14:37:02 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/k-turn-1/CM /share/data/people/ppg15/motifs/k-turn-1/SEED COM [2] /share/data/bin/cmcalibrate --mpi --seed 1 /share/data/people/ppg15/motifs/k-turn-1/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 15.000000 CKSUM 2984436391 NULL 0.000 0.000 0.000 0.000 GA 9.00 EFP7GF -1.4562 0.76585 ECMLC 0.56434 -4.60257 5.57400 1600000 374433 0.003205 ECMGC 0.58604 -3.23659 6.69797 1600000 135059 0.002962 ECMLI 0.57188 -2.27355 7.07264 1600000 251444 0.004772 ECMGI 0.59978 -1.87485 7.48623 1600000 109763 0.003644 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 716 1536 -9.184 -9.391 -0.844 -1.185 IL 1 1 2 1 4 1 6 719 1538 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 5 718 1538 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 5 1 8 717 1536 -8.323 -0.017 -8.139 -8.351 -9.243 -1.327 0.942 0.014 -0.578 D 4 2 3 5 5 0 1 713 1532 -8.407 -1.311 -7.668 -6.043 -0.801 IL 5 5 3 5 5 1 5 717 1536 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 116 C G - - MP 6 5 3 10 6 2 9 716 1535 -10.060 -10.000 -0.063 -8.776 -4.753 -9.451 -4.668 -4.592 -0.531 -0.803 -3.665 -5.312 3.407 -0.720 -4.604 0.533 -5.053 -2.511 0.157 -4.867 -1.319 -3.481 ML 7 5 3 10 6 1 4 714 1533 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 4 714 1533 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 1 711 1530 -12.241 -10.939 -3.246 -7.418 -7.435 -0.181 IL 10 10 5 10 6 1 5 715 1534 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 5 715 1534 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 115 c g - - MP 12 11 6 16 6 2 8 714 1533 -10.048 -2.788 -0.237 -8.764 -9.044 -9.439 -6.244 -6.371 -5.712 -2.491 -4.151 -5.956 2.883 -5.029 -5.774 -2.385 -5.964 -4.474 0.820 -6.164 2.634 -4.567 ML 13 11 6 16 6 1 3 712 1531 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 4 713 1532 -7.825 -6.554 -0.685 -6.532 -1.666 -4.746 -0.357 -1.333 1.151 -0.734 D 15 11 6 16 6 0 0 710 1529 -12.095 -2.006 -1.718 -7.272 -7.290 -1.204 IL 16 16 5 16 6 1 4 713 1532 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 5 713 1532 -4.159 -0.516 -7.671 -2.109 -6.944 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 113 c g - - MP 18 17 6 22 6 2 8 712 1531 -2.889 -10.138 -0.219 -8.915 -9.194 -9.590 -5.030 -4.261 -4.960 0.659 -4.353 -5.740 2.902 -4.793 -4.952 2.368 -5.386 -1.851 -0.231 -5.139 -1.845 -3.710 ML 19 17 6 22 6 1 2 710 1529 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 3 711 1531 -0.770 -6.979 -2.888 -6.958 -2.091 -5.171 1.519 -1.690 -1.390 -1.173 D 21 17 6 22 6 0 0 707 1526 -10.968 -9.667 -5.464 -6.146 -1.621 -0.652 IL 22 22 5 22 6 1 6 712 1531 -1.252 -5.899 -0.860 -7.554 -8.330 -7.991 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 4 711 1530 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 7 112 c g - - MP 24 23 6 28 6 2 7 710 1529 -10.279 -10.218 -0.009 -8.994 -9.274 -9.669 -4.530 -4.324 -4.558 0.284 -3.579 -5.382 2.624 -4.205 -4.463 1.359 -4.977 -2.031 1.395 -4.736 1.411 -3.256 ML 25 23 6 28 6 1 2 708 1527 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 2 708 1527 -7.838 -6.567 -0.678 -6.545 -1.679 -4.759 -0.370 -1.349 1.162 -0.749 D 27 23 6 28 6 0 0 706 1526 -10.431 -9.129 -0.623 -5.608 -5.626 -1.701 IL 28 28 5 28 6 1 2 709 1528 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 2 709 1528 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 8 111 g c - - MP 30 29 6 34 6 2 6 708 1527 -10.380 -10.320 -0.009 -9.096 -9.376 -9.771 -1.138 -3.276 -3.790 0.736 0.334 -4.552 1.185 -4.075 -3.931 2.819 -4.401 -1.214 0.938 -3.840 -1.545 -2.843 ML 31 29 6 34 6 1 2 706 1525 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 1 705 1525 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 0 703 1522 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 2 707 1526 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 2 707 1526 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 9 110 c g - - MP 36 35 6 40 4 2 5 706 1525 -9.184 -3.860 -0.113 -7.805 -1.150 -3.694 -3.805 -0.149 -3.288 -4.645 2.609 0.388 -3.798 1.699 -4.343 -1.814 1.209 -3.960 -0.369 -2.790 ML 37 35 6 40 4 1 1 705 1524 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 4 1 1 704 1523 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 39 35 6 40 4 0 0 702 1521 -4.568 -4.250 -2.265 -0.520 IL 40 40 5 40 4 1 2 706 1525 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 41 41 6 41 3 1 2 705 1524 -2.194 -0.419 -4.894 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - c - - - ML 42 41 6 44 3 1 3 704 1523 -10.117 -0.005 -8.771 -2.006 0.812 0.541 -0.885 D 43 41 6 44 3 0 0 701 1520 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 704 1523 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 11 - G - - - ML 45 44 3 47 3 1 3 703 1522 -1.907 -0.452 -8.771 -0.847 -3.484 1.644 -2.124 D 46 44 3 47 3 0 0 700 1520 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 2 703 1522 -1.638 -0.584 -6.456 0.000 0.000 0.000 0.000 [ MATL 10 ] 14 - A - - - ML 48 47 3 50 3 1 2 702 1521 -10.432 -0.004 -8.750 1.979 -6.010 -5.414 -5.640 D 49 47 3 50 3 0 0 700 1519 -5.620 -0.734 -1.403 IL 50 50 3 50 3 1 1 702 1521 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 108 - c - - MR 51 50 3 53 3 1 1 701 1520 -10.432 -0.080 -4.226 -0.169 0.271 -0.419 0.209 D 52 50 3 53 3 0 0 699 1518 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 701 1520 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 107 - A - - MR 54 53 3 56 3 1 1 700 1519 -10.357 -0.005 -8.674 1.726 -4.227 -0.786 -4.073 D 55 53 3 56 3 0 0 698 1517 -7.874 -0.390 -2.104 IR 56 56 3 56 3 1 1 700 1519 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 106 - G - - MR 57 56 3 59 3 1 1 699 1518 -1.634 -0.699 -4.020 -1.982 -3.888 1.779 -2.017 D 58 56 3 59 3 0 0 696 1516 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 698 1518 -4.366 -0.087 -6.605 0.000 0.000 0.000 0.000 [ MATR 14 ] - 104 - u - - MR 60 59 3 62 3 1 1 697 1517 -10.344 -0.005 -8.662 0.129 -0.608 -1.527 0.928 D 61 59 3 62 3 0 0 696 1515 -8.016 -0.349 -2.246 IR 62 62 3 62 3 1 1 698 1517 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 103 - u - - MR 63 62 3 65 3 1 1 696 1516 -10.432 -0.004 -8.750 0.244 -1.022 -0.146 0.505 D 64 62 3 65 3 0 0 694 1513 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 697 1516 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 102 - G - - MR 66 65 3 68 5 1 1 695 1515 -9.096 -0.010 -8.912 -9.124 -10.015 0.072 -1.839 1.210 -1.490 D 67 65 3 68 5 0 0 693 1512 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 695 1514 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 15 101 G C - - MP 69 68 3 73 6 2 2 694 1514 -10.380 -10.320 -0.044 -9.096 -9.376 -5.307 -5.734 -4.130 -5.713 -0.671 -6.862 -5.986 -0.301 -6.200 -5.564 3.361 -5.893 1.915 -2.218 -5.509 -3.976 -4.594 ML 70 68 3 73 6 1 1 692 1512 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 692 1511 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 688 1507 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 694 1513 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 693 1513 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 16 100 c g - - MP 75 74 6 79 6 2 2 693 1512 -10.345 -10.284 -0.059 -9.061 -9.341 -4.833 -4.092 -3.962 -4.171 0.452 0.483 -4.995 2.187 -4.044 -4.144 2.162 -4.668 -1.879 0.874 -4.323 0.643 -3.042 ML 76 74 6 79 6 1 1 691 1510 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 690 1510 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 687 1506 -10.039 -8.738 -4.535 -5.217 -5.234 -0.152 IL 79 79 5 79 6 1 1 692 1511 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 692 1511 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 17 99 u g - - MP 81 80 6 85 4 2 2 691 1510 -9.069 -9.276 -0.188 -3.072 -4.211 -4.048 -4.277 0.483 -3.486 -5.112 1.951 -4.063 -4.220 1.195 -4.745 -0.562 1.175 -4.437 2.296 -3.076 ML 82 80 6 85 4 1 1 690 1509 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 4 1 1 689 1508 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 84 80 6 85 4 0 0 687 1506 -6.241 -5.922 -3.938 -0.144 IL 85 85 5 85 4 1 1 691 1510 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 86 86 6 86 3 1 1 690 1509 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - A - - - ML 87 86 6 89 3 1 1 689 1508 -9.832 -0.068 -4.474 1.132 -1.291 -0.101 -1.097 D 88 86 6 89 3 0 0 687 1506 -9.239 -1.463 -0.654 IL 89 89 3 89 3 1 1 689 1509 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - G - - - ML 90 89 3 92 3 1 1 688 1507 -9.887 -0.005 -8.541 -1.879 -1.146 1.414 -0.710 D 91 89 3 92 3 0 0 686 1505 -8.995 -0.148 -3.387 IL 92 92 3 92 3 1 1 688 1507 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - u - - - ML 93 92 3 95 3 1 1 687 1506 -10.117 -0.005 -8.771 0.242 -0.916 -0.726 0.751 D 94 92 3 95 3 0 0 675 1494 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 686 1506 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - c - - - ML 96 95 3 98 3 1 1 686 1505 -10.117 -0.005 -8.771 0.423 0.683 -2.572 -0.175 D 97 95 3 98 3 0 0 669 1488 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 685 1504 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - u - - - ML 99 98 3 101 3 1 1 685 1504 -10.117 -0.095 -3.999 -0.055 -1.250 0.266 0.500 D 100 98 3 101 3 0 0 658 1478 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 685 1504 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - G - - - ML 102 101 3 104 3 1 1 686 1505 -10.027 -0.728 -1.339 -0.199 -2.264 1.473 -2.781 D 103 101 3 104 3 0 0 635 1454 -7.972 -3.485 -0.141 IL 104 104 3 104 3 1 1 702 1521 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - U - - - ML 105 104 3 107 3 1 1 704 1523 -9.307 -0.008 -7.961 -3.872 -3.526 -4.666 1.928 D 106 104 3 107 3 0 0 614 1433 -10.396 -5.909 -0.025 IL 107 107 3 107 3 1 1 701 1520 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - G - - - ML 108 107 3 110 3 1 1 703 1522 -0.532 -2.411 -3.056 -0.871 -3.591 1.702 -3.099 D 109 107 3 110 3 0 0 608 1428 -3.564 -1.131 -1.124 IL 110 110 3 110 3 1 1 718 1537 -0.032 -5.507 -11.981 0.000 0.000 0.000 0.000 [ MATL 28 ] 98 - C - - - ML 111 110 3 113 2 1 1 1 1 * 0.000 -0.220 1.191 -1.145 -1.298 D 112 110 3 113 2 0 0 0 0 * 0.000 IL 113 113 3 113 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 29 ] - - - - - - E 114 113 3 -1 0 0 0 0 0 // HMMER3/f [i1.1 | October 2013] NAME k-turn-1 DESC Kink turn, 3' bulge LENG 37 MAXL 874 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri May 30 14:37:02 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/k-turn-1/CM /share/data/people/ppg15/motifs/k-turn-1/SEED NSEQ 15 EFFN 15.000000 CKSUM 2984436391 STATS LOCAL MSV -7.9900 0.76585 STATS LOCAL VITERBI -9.7799 0.76585 STATS LOCAL FORWARD -2.3151 0.76585 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51076 1.40074 1.14633 1.53692 1.38629 1.38629 1.38629 1.38629 0.20375 4.78636 1.73734 1.46634 0.26236 0.00000 * 1 2.30589 0.73306 1.37648 1.78721 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.02025 4.60286 4.60286 1.46634 0.26236 0.09058 2.44645 2 2.45869 0.35026 2.23969 2.26859 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.06712 4.84931 2.86320 1.46634 0.26236 1.09861 0.40547 3 4.12199 0.76474 3.99329 0.69336 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.01598 4.83745 4.83745 1.46634 0.26236 0.24252 1.53549 4 2.22818 0.75267 1.07191 2.54067 4 c - - < 1.38629 1.38629 1.38629 1.38629 0.21674 1.67134 4.98122 0.62697 0.76401 1.09861 0.40547 5 2.44287 0.93263 1.71025 1.08249 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.01283 5.05517 5.05517 1.46634 0.26236 1.09861 0.40547 6 1.93103 1.48294 0.74892 1.86333 8 g - - < 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 7 2.34728 0.75565 1.47734 1.57784 9 c - - < 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 8 2.77654 0.82375 1.01161 2.00006 10 c - - - 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 9 1.97366 3.80092 0.24673 2.85853 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.31766 1.32299 5.14749 0.39646 1.11686 1.09861 0.40547 10 0.01487 5.55198 5.13908 5.29562 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 11 3.07331 2.92505 0.13040 3.80195 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04385 5.14749 3.29457 1.46634 0.26236 1.09861 0.40547 12 2.32709 0.97565 1.19588 1.50043 16 c - - < 1.38629 1.38629 1.38629 1.38629 0.05793 5.11573 2.99013 1.46634 0.26236 2.12566 0.12710 13 2.31375 1.37617 1.65440 0.78228 17 u - - < 1.38629 1.38629 1.38629 1.38629 0.13039 5.07044 2.15448 1.46634 0.26236 2.75724 0.06557 14 0.60160 2.28133 1.45647 2.14676 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05689 4.95426 3.03139 1.46634 0.26236 1.00350 0.45665 15 2.68865 2.18039 0.40620 1.87827 19 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01369 4.99122 4.99122 1.46634 0.26236 0.07443 2.63491 16 1.21881 2.02137 1.88931 0.86567 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 17 1.09315 0.91303 3.16896 1.50739 21 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 18 1.42474 2.25251 1.20169 1.03957 22 u - - _ 1.38629 1.38629 1.38629 1.38629 0.07332 5.14749 2.73520 1.46634 0.26236 1.09861 0.40547 19 1.52433 2.95546 0.36557 3.31383 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.50589 5.08661 0.93943 1.46634 0.26236 2.57714 0.07903 20 4.07003 3.83052 4.62061 0.04984 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02029 4.60101 4.60101 1.46634 0.26236 2.31972 0.10347 21 1.99037 3.87566 0.20648 3.53466 25 G - - _ 1.38629 1.38629 1.38629 1.38629 1.38955 0.45270 2.16368 4.01638 0.01818 0.68859 0.69773 22 1.53870 0.56100 2.18020 2.28590 98 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01569 4.85575 4.85575 1.46634 0.26236 0.38153 1.14827 23 1.86949 1.88578 0.59300 1.95601 99 G - - > 1.38629 1.38629 1.38629 1.38629 0.01264 5.07044 5.07044 1.46634 0.26236 0.63165 0.75868 24 1.56322 1.24284 0.94778 2.16828 100 g - - > 1.38629 1.38629 1.38629 1.38629 0.01208 5.11573 5.11573 1.46634 0.26236 0.27274 1.43251 25 4.05898 0.43551 2.85793 1.27865 101 C - - > 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 26 1.33633 2.66132 0.54757 2.41933 102 G - - - 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 27 1.21713 2.09448 1.48726 1.03621 103 u - - - 1.38629 1.38629 1.38629 1.38629 0.07332 5.14749 2.73520 1.46634 0.26236 1.09861 0.40547 28 1.29664 1.80788 2.44496 0.74272 104 u - - - 1.38629 1.38629 1.38629 1.38629 0.43480 1.06009 5.08661 0.03530 3.36152 0.16485 1.88400 29 2.76014 4.08117 0.15307 2.78445 106 G - - - 1.38629 1.38629 1.38629 1.38629 0.06457 5.14749 2.86972 1.46634 0.26236 1.09861 0.40547 30 0.19020 4.31629 1.93103 4.20920 107 A - - - 1.38629 1.38629 1.38629 1.38629 0.01233 5.09525 5.09525 1.46634 0.26236 0.18650 1.77112 31 1.50360 1.19823 1.67668 1.24149 108 c - - - 1.38629 1.38629 1.38629 1.38629 0.07972 2.64775 5.14749 0.15682 1.93002 1.09861 0.40547 32 1.68501 1.54178 0.83435 1.79336 110 g - - > 1.38629 1.38629 1.38629 1.38629 0.01170 5.14749 5.14749 1.46634 0.26236 1.09861 0.40547 33 1.45806 0.79947 1.76063 1.92545 111 c - - > 1.38629 1.38629 1.38629 1.38629 0.01233 5.09525 5.09525 1.46634 0.26236 1.09861 0.40547 34 1.73659 1.80995 0.58628 2.26507 112 G - - > 1.38629 1.38629 1.38629 1.38629 0.01283 5.05517 5.05517 1.46634 0.26236 1.09861 0.40547 35 2.30549 1.15947 0.76720 2.10108 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.31354 1.33873 4.96712 0.07391 2.64166 1.09861 0.40547 36 2.12635 4.00103 0.17651 3.71966 115 G - - > 1.38629 1.38629 1.38629 1.38629 0.01579 4.84931 4.84931 1.46634 0.26236 1.09861 0.40547 37 2.49587 2.32495 0.31824 2.38207 116 G - - > 1.38629 1.38629 1.38629 1.38629 0.00793 4.84145 * 1.46634 0.26236 0.00000 * //