INFERNAL1/a [1.1.4 | Dec 2020] NAME Plastid-ndhA-ndhB-2 ACC RF04357 DESC Plastid-ndhA-ndhB-2 group II-D5 intron STATES 127 NODES 29 CLEN 41 W 54 ALPH RNA RF no CONS yes MAP yes DATE Sat Nov 15 19:21:02 2025 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15.1/Chloroplasts/fixed/GOOD/NC_040160.1/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 871 EFFN 15.991680 CKSUM 1627447590 NULL 0.000 0.000 0.000 0.000 GA 53.00 TC 53.00 NC 52.90 EFP7GF -17.3933 0.71961 ECMLC 0.63206 -6.78522 3.29364 1600000 701192 0.001711 ECMGC 0.53630 -16.70289 -2.70667 1600000 727665 0.000550 ECMLI 0.65759 -5.53104 3.71797 1600000 525497 0.002284 ECMGI 0.58194 -13.42130 -1.07004 1600000 529206 0.000756 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 54 72 -9.268 -9.475 -0.340 -2.274 IL 1 1 2 1 4 1 3 59 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 2 58 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 2 54 72 -9.878 -0.005 -8.532 -4.583 -6.169 1.971 -5.317 D 4 2 3 5 3 0 0 53 71 -9.450 -0.218 -2.848 IL 5 5 3 5 3 1 1 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 1 53 71 -10.492 -0.387 -2.093 1.876 -3.586 -2.690 -3.458 D 7 5 3 8 3 0 0 51 70 -6.113 -0.972 -1.071 IL 8 8 3 8 3 1 1 54 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 58 - A - - MR 9 8 3 11 3 1 1 52 70 -10.119 -0.005 -8.436 1.971 -5.569 -4.995 -5.243 D 10 8 3 11 3 0 0 51 69 -9.699 -0.293 -2.452 IR 11 11 3 11 3 1 1 53 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 57 - u - - MR 12 11 3 14 3 1 1 51 69 -10.468 -0.004 -8.786 -0.283 -0.899 -0.305 0.874 D 13 11 3 14 3 0 0 49 68 -7.501 -0.638 -1.506 IR 14 14 3 14 3 1 1 52 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 56 - G - - MR 15 14 3 17 5 1 1 50 68 -9.172 -0.024 -8.987 -6.403 -10.091 -3.564 -6.169 1.955 -5.382 D 16 14 3 17 5 0 0 48 67 -5.438 -0.706 -3.065 -3.911 -2.490 IR 17 17 3 17 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 3 55 G U - - MP 18 17 3 22 6 2 2 49 67 -10.430 -10.370 -0.008 -9.146 -9.426 -9.821 -6.062 -4.716 -6.262 -0.582 -8.326 -9.402 -3.788 -6.296 -5.815 -0.792 -2.692 3.824 -3.755 -7.547 -5.629 -2.616 ML 19 17 3 22 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 3 22 6 1 1 47 66 -7.319 -6.048 -1.140 -6.026 -1.131 -4.240 -0.028 -0.419 -0.632 0.701 D 21 17 3 22 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 54 G C - - MP 24 23 6 28 6 2 2 47 65 -10.443 -10.382 -0.008 -9.158 -9.438 -9.833 -4.802 -2.703 -4.637 0.435 -5.783 -5.235 -0.852 -5.303 -5.018 3.441 -5.281 1.023 -1.115 -2.806 -2.860 -3.286 ML 25 23 6 28 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 1 45 64 -7.004 -5.733 -1.642 -5.711 -0.816 -3.925 0.342 -0.303 -0.248 0.111 D 27 23 6 28 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 53 A U - - MP 30 29 6 34 6 2 2 45 63 -10.443 -10.382 -0.008 -9.158 -9.438 -9.833 -9.652 -8.715 -5.872 3.988 -10.588 -11.100 -7.135 -5.061 -9.574 -5.341 -9.995 -5.308 -7.445 -10.623 -8.767 -5.787 ML 31 29 6 34 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 1 43 62 -7.004 -5.733 -1.592 -5.711 -0.845 -3.925 0.340 -0.377 -0.223 0.147 D 33 29 6 34 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 52 G U - - MP 36 35 6 40 6 2 2 43 61 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -6.086 -4.747 -6.279 -0.324 -8.366 -9.537 -3.833 -6.319 -5.841 -0.326 -6.509 3.817 -3.783 -7.580 -5.669 -4.878 ML 37 35 6 40 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 51 C G - - MP 42 41 6 46 6 2 2 41 59 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -7.155 -7.113 -6.603 -3.119 -1.761 -6.832 3.871 -2.798 -6.821 -2.948 -6.752 -3.355 -1.717 -7.181 -2.506 -4.412 ML 43 41 6 46 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 50 C G - - MP 48 47 6 52 6 2 2 39 57 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -2.681 -3.533 -3.611 -0.098 -1.557 -3.684 3.042 -3.675 -2.820 -0.040 -4.170 -1.756 1.494 -3.233 0.463 -2.033 ML 49 47 6 52 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 49 G C - - MP 54 53 6 58 6 2 2 37 55 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -4.738 -2.319 -4.563 0.432 -5.685 -3.248 -0.754 -4.507 -4.969 3.580 -3.200 -0.563 -1.020 -3.206 -2.763 -3.529 ML 55 53 6 58 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 48 u a - - MP 60 59 6 64 6 2 2 35 53 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -3.702 -2.783 -3.759 0.578 -3.871 -3.232 0.170 -4.110 -3.923 2.447 -4.387 -1.010 2.574 -1.954 -1.258 -2.646 ML 61 59 6 64 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 47 A U - - MP 66 65 6 70 6 2 2 33 51 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -6.231 -4.389 -6.226 3.855 -8.522 -9.642 -3.998 -6.238 -5.989 -0.107 -6.655 -1.752 -3.937 -7.714 -5.830 -4.949 ML 67 65 6 70 6 1 1 32 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 46 U G - - MP 72 71 6 76 4 2 2 31 49 -9.087 -10.333 -0.017 -6.786 -7.073 -7.333 -6.408 -3.556 -3.791 -6.563 0.200 -5.680 -3.985 -3.517 -3.286 -5.692 -0.040 -6.918 3.740 -5.308 ML 73 71 6 76 4 1 1 30 49 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 30 49 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 28 47 -12.737 -14.007 -2.036 -0.404 IL 76 76 5 76 4 1 1 30 49 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 31 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 45 - U - - MR 78 77 6 80 3 1 1 29 47 -10.514 -0.004 -8.831 -2.459 0.273 -3.203 1.322 D 79 77 6 80 3 0 0 27 46 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 30 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 44 - A - - MR 81 80 3 83 5 1 1 28 46 -8.733 -0.010 -8.992 -9.204 -10.095 1.914 -3.927 -3.139 -4.290 D 82 80 3 83 5 0 0 26 45 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 1 28 47 -2.290 -0.523 -5.962 -4.129 -5.235 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 39 G C - - MP 84 83 3 88 6 2 2 27 45 -10.443 -10.382 -0.008 -9.159 -9.439 -9.834 -7.415 -1.881 -7.944 -1.938 -8.677 -6.083 -3.425 -8.362 -6.202 3.884 -6.412 -1.540 -3.734 -3.217 -5.630 -6.905 ML 85 83 3 88 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 38 A U - - MP 90 89 6 94 6 2 2 25 43 -10.443 -9.643 -0.009 -9.159 -9.439 -9.834 -10.982 -9.931 -5.810 3.993 -11.347 -11.399 -9.984 -5.595 -11.267 -7.503 -11.266 -6.216 -10.265 -11.439 -9.625 -5.858 ML 91 89 6 94 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 24 43 -2.419 -0.492 -5.930 -4.098 -5.204 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 36 G C - - MP 96 95 6 100 6 2 2 23 41 -8.568 -9.736 -0.012 -9.159 -9.439 -9.834 -3.932 -1.759 -4.442 0.582 -5.515 -3.289 -0.655 -4.244 -1.756 3.414 -3.461 0.404 -0.858 -3.205 -2.647 -3.416 ML 97 95 6 100 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 23 42 -2.350 -2.973 -0.779 -4.628 -5.404 -5.065 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 22 41 -2.418 -0.492 -5.929 -4.096 -5.202 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 34 A U - - MP 102 101 6 106 4 2 2 21 39 -8.534 -8.970 -0.013 -7.889 -4.870 -1.297 -2.876 3.216 -5.613 -6.165 -1.766 -2.748 -4.945 0.181 -4.182 1.940 -1.911 -5.306 -3.459 -2.210 ML 103 101 6 106 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 105 101 6 106 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 106 106 5 106 4 1 1 24 43 -1.587 -2.465 -1.141 -4.950 0.000 0.000 0.000 0.000 IR 107 107 6 107 3 1 1 23 41 -1.435 -0.800 -4.160 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - u - - - ML 108 107 6 110 3 1 1 17 36 -10.199 -0.004 -8.853 0.466 -1.432 -1.808 0.973 D 109 107 6 110 3 0 0 18 36 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - G - - - ML 111 110 3 113 3 1 1 16 35 -8.884 -0.006 -8.853 -1.726 -2.816 1.696 -1.659 D 112 110 3 113 3 0 0 17 35 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 21 39 -1.445 -0.793 -4.172 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - A - - - ML 114 113 3 116 3 1 1 15 33 -10.199 -0.004 -8.853 1.859 -2.781 -3.267 -3.009 D 115 113 3 116 3 0 0 16 34 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - A - - - ML 117 116 3 119 3 1 1 13 32 -9.564 -0.005 -8.853 1.873 -3.316 -2.870 -3.335 D 118 116 3 119 3 0 0 14 33 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 19 37 -1.449 -0.792 -4.149 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - A - - - ML 120 119 3 122 3 1 1 11 30 -10.199 -0.004 -8.853 1.902 -3.692 -3.223 -3.653 D 121 119 3 122 3 0 0 13 32 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - a - - - ML 123 122 3 125 2 1 1 1 1 * 0.000 0.811 0.032 -1.213 -0.337 D 124 122 3 125 2 0 0 0 0 * 0.000 IL 125 125 3 125 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 28 ] - - - - - - E 126 125 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Plastid-ndhA-ndhB-2 ACC RF04357 DESC Plastid-ndhA-ndhB-2 group II-D5 intron LENG 41 MAXL 100 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Nov 15 19:21:02 2025 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15.1/Chloroplasts/fixed/GOOD/NC_040160.1/CM NSEQ 871 EFFN 29.607700 CKSUM 1627447590 STATS LOCAL MSV -6.7221 0.71961 STATS LOCAL VITERBI -7.1873 0.71961 STATS LOCAL FORWARD -3.8375 0.71961 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26305 1.79646 1.21261 1.37080 1.38629 1.38629 1.38629 1.38629 0.23664 5.48725 1.57702 1.46634 0.26236 0.00000 * 1 5.12463 6.30208 0.01139 5.64288 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.01043 5.26104 5.26104 1.46634 0.26236 0.11778 2.19722 2 0.07062 4.12525 3.36747 4.04290 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.00845 5.47153 5.47153 1.46634 0.26236 1.25080 0.33726 3 3.43862 5.63823 0.05065 4.28912 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.00841 5.47546 5.47546 1.46634 0.26236 0.45360 1.00879 4 2.62767 3.73680 0.14296 3.29314 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.00832 5.48672 5.48672 1.46634 0.26236 1.13979 0.38550 5 0.00666 6.08083 6.06580 6.19910 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.00832 5.48672 5.48672 1.46634 0.26236 1.02102 0.44664 6 3.19937 5.63866 0.05097 5.23071 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 7 5.16002 0.05297 4.24196 3.45876 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 8 3.00730 0.48484 2.83021 1.28816 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 9 2.57899 3.37363 0.15809 3.32123 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 10 2.43048 3.04944 0.93348 0.75197 10 u - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 11 0.08218 5.65015 2.65811 5.24146 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 12 5.35935 2.84009 4.23985 0.08070 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 13 3.60330 5.68632 0.04185 4.56931 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 14 0.00541 6.29213 6.38143 6.29107 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 15 2.33354 3.28476 0.19310 3.18926 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.01087 5.00933 5.48725 1.14881 0.38128 1.09861 0.40547 16 0.39777 4.32002 1.21181 4.06142 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.00940 5.25644 5.48725 1.36177 0.29599 1.09861 0.40547 17 1.03355 2.57565 2.90390 0.66680 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 18 2.76799 3.55934 0.18171 2.59145 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00961 5.21676 5.48725 1.21399 0.35241 1.09861 0.40547 19 0.08001 3.43319 3.92167 3.69688 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 20 0.07164 3.88239 3.52978 3.95186 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00879 5.37797 5.48725 1.33378 0.30582 1.09861 0.40547 21 0.05482 4.16094 3.80152 4.17224 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 22 0.78157 1.32446 2.34101 1.71404 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00891 5.35419 5.48725 1.35738 0.29751 1.09861 0.40547 23 5.21917 2.83682 4.16815 0.08284 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.00888 5.36032 5.48725 1.31368 0.31311 1.09861 0.40547 24 2.98686 0.29381 3.19037 1.81414 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.00898 5.33843 5.48725 1.28923 0.32225 1.09861 0.40547 25 7.20090 7.14744 6.38046 0.00323 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 26 5.81468 0.03433 5.63642 3.60464 39 C - - > 1.38629 1.38629 1.38629 1.38629 0.00897 5.34127 5.48725 1.45024 0.26724 1.09861 0.40547 27 0.04563 4.35932 3.72190 4.87534 44 A - - - 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 28 3.50836 1.16792 3.97069 0.44600 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 29 2.79262 5.43321 0.07418 5.13868 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 30 5.37179 2.85205 5.40184 0.06922 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 31 0.82934 0.92484 2.82692 2.22681 48 a - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 32 3.73001 0.17824 3.24383 2.30009 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 33 1.57697 2.98464 0.38408 2.78440 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 34 3.02205 5.16901 0.09262 3.37949 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 35 5.29796 3.15167 5.34453 0.05399 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 36 6.37511 6.40828 6.07888 0.00566 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 37 3.80014 0.29795 3.52419 1.58077 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.00831 5.48725 5.48725 1.46634 0.26236 1.09861 0.40547 38 5.03654 3.51897 4.20256 0.05243 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.01138 5.48725 4.93660 1.46634 0.26236 1.09861 0.40547 39 3.99715 6.35581 0.02360 5.73981 56 G - - : 1.38629 1.38629 1.38629 1.38629 0.03819 5.48420 3.40157 1.46634 0.26236 1.31758 0.31168 40 1.66426 2.09560 1.57662 0.73189 57 u - - : 1.38629 1.38629 1.38629 1.38629 0.26168 5.45460 1.48737 1.46634 0.26236 2.37583 0.09754 41 0.01000 5.97416 5.53402 5.66708 58 A - - : 1.38629 1.38629 1.38629 1.38629 0.27327 1.43083 * 0.04559 3.11078 0.00000 * //