INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-8186 ACC RF04252 DESC mir-8186 microRNA precursor family STATES 187 NODES 37 CLEN 61 W 75 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 06:23:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04252/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.628906 CKSUM 149105527 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 84.10 NC 64.60 EFP7GF -5.1924 0.72929 ECMLC 0.68275 -4.29865 3.91536 1600000 327164 0.003668 ECMGC 0.49287 -13.30943 -0.14694 1600000 262720 0.001523 ECMLI 0.67702 -3.22378 4.81387 1600000 276986 0.004332 ECMGI 0.53984 -8.69097 2.70070 1600000 187428 0.002134 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 75 94 -6.746 -7.992 -0.088 -4.445 IL 1 1 2 1 4 1 1 77 96 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 1 77 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 61 - U - - MR 3 2 3 5 5 1 1 75 94 -6.990 -0.042 -6.805 -7.018 -7.909 -1.269 -1.304 -1.991 1.550 D 4 2 3 5 5 0 0 74 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 1 76 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 60 A U - - MP 6 5 3 10 6 2 2 74 93 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 7 5 3 10 6 1 1 73 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 1 73 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 0 70 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 1 74 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 1 74 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 59 C G - - MP 12 11 6 16 6 2 2 72 91 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.312 -4.195 -4.041 -0.451 -2.813 -4.483 3.470 -3.599 -4.083 -0.173 -4.368 -2.140 0.723 -4.396 -0.515 -2.931 ML 13 11 6 16 6 1 1 71 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 1 71 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 1 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 1 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 58 U A - - MP 18 17 6 22 6 2 2 70 89 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.948 -3.764 -3.812 -0.078 -2.808 -4.398 1.514 -3.486 -3.820 0.216 -4.205 -1.671 3.198 -4.108 -0.490 -2.667 ML 19 17 6 22 6 1 1 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 1 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 1 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 1 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 57 G C - - MP 24 23 6 28 6 2 2 68 87 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.513 -2.985 -4.593 0.350 -4.910 -4.602 -0.330 -4.818 -4.174 3.578 -4.528 -0.677 -0.723 -4.317 -2.356 -3.474 ML 25 23 6 28 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 1 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 1 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 56 C G - - MP 30 29 6 34 6 2 2 66 85 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.312 -4.195 -4.041 -0.451 -2.813 -4.483 3.470 -3.599 -4.083 -0.173 -4.368 -2.140 0.723 -4.396 -0.515 -2.931 ML 31 29 6 34 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 1 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 0 62 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 1 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 55 U A - - MP 36 35 6 40 6 2 2 64 83 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.948 -3.764 -3.812 -0.078 -2.808 -4.398 1.514 -3.486 -3.820 0.216 -4.205 -1.671 3.198 -4.108 -0.490 -2.667 ML 37 35 6 40 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 1 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 54 C G - - MP 42 41 6 46 6 2 2 62 81 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.312 -4.195 -4.041 -0.451 -2.813 -4.483 3.470 -3.599 -4.083 -0.173 -4.368 -2.140 0.723 -4.396 -0.515 -2.931 ML 43 41 6 46 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 53 A U - - MP 48 47 6 52 6 2 2 60 79 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 49 47 6 52 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 52 A U - - MP 54 53 6 58 6 2 2 58 77 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 55 53 6 58 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 51 A U - - MP 60 59 6 64 6 2 2 56 75 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 61 59 6 64 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 50 G C - - MP 66 65 6 70 6 2 2 54 73 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.513 -2.985 -4.593 0.350 -4.910 -4.602 -0.330 -4.818 -4.174 3.578 -4.528 -0.677 -0.723 -4.317 -2.356 -3.474 ML 67 65 6 70 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 49 G C - - MP 72 71 6 76 6 2 2 52 71 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.513 -2.985 -4.593 0.350 -4.910 -4.602 -0.330 -4.818 -4.174 3.578 -4.528 -0.677 -0.723 -4.317 -2.356 -3.474 ML 73 71 6 76 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 13 48 A U - - MP 78 77 6 82 6 2 2 50 69 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 79 77 6 82 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 14 47 C G - - MP 84 83 6 88 6 2 2 48 67 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.312 -4.195 -4.041 -0.451 -2.813 -4.483 3.470 -3.599 -4.083 -0.173 -4.368 -2.140 0.723 -4.396 -0.515 -2.931 ML 85 83 6 88 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 15 46 U A - - MP 90 89 6 94 6 2 2 46 65 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.948 -3.764 -3.812 -0.078 -2.808 -4.398 1.514 -3.486 -3.820 0.216 -4.205 -1.671 3.198 -4.108 -0.490 -2.667 ML 91 89 6 94 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 16 45 U A - - MP 96 95 6 100 6 2 2 44 63 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.948 -3.764 -3.812 -0.078 -2.808 -4.398 1.514 -3.486 -3.820 0.216 -4.205 -1.671 3.198 -4.108 -0.490 -2.667 ML 97 95 6 100 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 17 44 U A - - MP 102 101 6 106 6 2 2 42 61 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.948 -3.764 -3.812 -0.078 -2.808 -4.398 1.514 -3.486 -3.820 0.216 -4.205 -1.671 3.198 -4.108 -0.490 -2.667 ML 103 101 6 106 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 18 43 G C - - MP 108 107 6 112 6 2 2 40 59 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.513 -2.985 -4.593 0.350 -4.910 -4.602 -0.330 -4.818 -4.174 3.578 -4.528 -0.677 -0.723 -4.317 -2.356 -3.474 ML 109 107 6 112 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 19 42 C G - - MP 114 113 6 118 6 2 2 38 57 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.312 -4.195 -4.041 -0.451 -2.813 -4.483 3.470 -3.599 -4.083 -0.173 -4.368 -2.140 0.723 -4.396 -0.515 -2.931 ML 115 113 6 118 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 20 41 U A - - MP 120 119 6 124 6 2 2 36 55 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.948 -3.764 -3.812 -0.078 -2.808 -4.398 1.514 -3.486 -3.820 0.216 -4.205 -1.671 3.198 -4.108 -0.490 -2.667 ML 121 119 6 124 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 21 40 G C - - MP 126 125 6 130 6 2 2 34 53 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.513 -2.985 -4.593 0.350 -4.910 -4.602 -0.330 -4.818 -4.174 3.578 -4.528 -0.677 -0.723 -4.317 -2.356 -3.474 ML 127 125 6 130 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 22 39 C G - - MP 132 131 6 136 6 2 2 32 51 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -4.312 -4.195 -4.041 -0.451 -2.813 -4.483 3.470 -3.599 -4.083 -0.173 -4.368 -2.140 0.723 -4.396 -0.515 -2.931 ML 133 131 6 136 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 23 38 A U - - MP 138 137 6 142 6 2 2 30 49 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 139 137 6 142 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 24 37 A U - - MP 144 143 6 148 6 2 2 28 47 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 145 143 6 148 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 25 36 A U - - MP 150 149 6 154 6 2 2 26 45 -9.060 -8.999 -0.022 -7.775 -8.055 -8.450 -3.601 -2.683 -3.632 3.192 -3.877 -4.923 0.411 -3.686 -3.533 1.285 -4.071 -0.192 -0.007 -4.142 -1.531 -2.478 ML 151 149 6 154 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 26 35 c g - - MP 156 155 6 160 4 2 2 24 43 -6.819 -7.026 -0.058 -5.440 -3.002 -3.100 -2.992 0.283 1.386 -3.633 1.865 -2.871 -3.039 0.381 -3.479 -1.411 1.224 -3.220 1.751 -2.042 ML 157 155 6 160 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 159 155 6 160 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 160 160 5 160 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 161 161 6 161 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - u - - - ML 162 161 6 164 3 1 1 21 40 -7.845 -0.022 -6.499 0.535 -0.791 -0.992 0.557 D 163 161 6 164 3 0 0 20 39 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - U - - - ML 165 164 3 167 3 1 1 20 39 -7.845 -0.022 -6.499 -1.269 -1.304 -1.991 1.550 D 166 164 3 167 3 0 0 19 38 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - a - - - ML 168 167 3 170 3 1 1 19 38 -7.845 -0.022 -6.499 0.682 -1.295 0.459 -0.703 D 169 167 3 170 3 0 0 18 37 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - a - - - ML 171 170 3 173 3 1 1 18 36 -7.845 -0.022 -6.499 0.597 0.215 -1.034 -0.255 D 172 170 3 173 3 0 0 17 36 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - u - - - ML 174 173 3 176 3 1 1 16 35 -7.845 -0.022 -6.499 -0.309 -0.877 0.296 0.506 D 175 173 3 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - u - - - ML 177 176 3 179 3 1 1 15 33 -7.845 -0.022 -6.499 -0.612 0.416 -1.378 0.702 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - A - - - ML 180 179 3 182 3 1 1 13 32 -7.845 -0.022 -6.499 1.662 -2.133 -1.789 -1.653 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - u - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 0.535 -0.791 -0.992 0.557 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 36 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-8186 ACC RF04252 DESC mir-8186 microRNA precursor family LENG 61 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 06:23:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF04252/CM NSEQ 2 EFFN 1.886719 CKSUM 149105527 STATS LOCAL MSV -8.7160 0.72929 STATS LOCAL VITERBI -9.2700 0.72929 STATS LOCAL FORWARD -2.9260 0.72929 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.41500 1.45344 1.38195 1.30114 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.45229 2.49772 1.63898 2.43749 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.95683 0.30567 2.70581 1.93396 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.72092 1.72465 2.44343 0.40184 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.43645 2.99718 0.21102 2.94046 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.96249 0.30487 2.70828 1.93488 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.72222 1.72467 2.44393 0.40164 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.96213 0.30492 2.70812 1.93482 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.45098 2.50125 1.63932 2.44295 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.45101 2.50117 1.63931 2.44284 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.45104 2.50110 1.63930 2.44273 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.43589 2.99658 0.21117 2.93961 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.43579 2.99648 0.21120 2.93946 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.45109 2.50095 1.63929 2.44249 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.96051 0.30515 2.70742 1.93456 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.72073 1.72464 2.44335 0.40187 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.72066 1.72464 2.44333 0.40188 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.72061 1.72464 2.44330 0.40189 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.43546 2.99613 0.21129 2.93896 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.96012 0.30521 2.70725 1.93449 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.72049 1.72464 2.44326 0.40191 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.43539 2.99606 0.21131 2.93886 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.96001 0.30522 2.70720 1.93448 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.45116 2.50078 1.63927 2.44223 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.45116 2.50078 1.63927 2.44222 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.45116 2.50077 1.63927 2.44222 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.40550 0.87572 2.25141 0.94684 26 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 1.00475 1.96734 2.11012 0.98668 27 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.39528 2.39643 2.90274 0.27058 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.89864 2.34409 1.04225 1.93599 29 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.95653 1.21210 2.14913 1.60138 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 1.63590 2.03203 1.15700 1.02241 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 1.86635 1.07018 2.40451 0.88660 32 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.19977 3.00736 2.75453 2.68797 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 1.00475 1.96734 2.11012 0.98668 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.08341 2.41216 0.77484 2.19678 35 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.66992 1.90693 2.31499 0.38062 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.66993 1.90693 2.31500 0.38062 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.66995 1.90693 2.31500 0.38061 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.20818 2.87359 0.26444 2.71862 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 3.14814 0.24824 2.82688 2.13963 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.45688 2.62239 1.56145 2.47358 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.20823 2.87365 0.26442 2.71870 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 3.14834 0.24822 2.82696 2.13967 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.45686 2.62245 1.56145 2.47365 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.45685 2.62248 1.56145 2.47369 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.45684 2.62252 1.56145 2.47374 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.20840 2.87387 0.26435 2.71897 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.67051 1.90698 2.31519 0.38052 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 3.14932 0.24810 2.82737 2.13986 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.14962 0.24807 2.82749 2.13992 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.67103 1.90702 2.31536 0.38043 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.67129 1.90704 2.31545 0.38039 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.67160 1.90706 2.31555 0.38034 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.20925 2.87491 0.26404 2.72030 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 0.45655 2.62348 1.56148 2.47502 55 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.20981 2.87560 0.26384 2.72119 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 3.15490 0.24746 2.82968 2.14094 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 0.45626 2.62448 1.56150 2.47634 58 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.21128 2.87742 0.26329 2.72350 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.67731 1.90751 2.31745 0.37939 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.39528 2.39643 2.90274 0.27058 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //