INFERNAL1/a [1.1.5 | Sep 2023] NAME NiCo-AnGGAG ACC RF03164 DESC NiCo-AnGGAG riboswitch aptamer STATES 281 NODES 71 CLEN 89 W 128 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 09:38:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03164/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 13 EFFN 1.767822 CKSUM 3285618749 NULL 0.000 0.000 0.000 0.000 GA 64.50 TC 69.70 NC 64.30 EFP7GF -8.7023 0.71870 ECMLC 0.73551 -4.87200 2.44070 1600000 260045 0.004615 ECMGC 0.38554 -14.65962 -3.09865 1600000 34498 0.011595 ECMLI 0.64655 -3.98720 4.02356 1600000 213088 0.005631 ECMGI 0.43374 -8.15362 2.04268 1600000 33322 0.012004 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 128 173 -6.880 -7.087 -0.056 -5.501 IL 1 1 2 1 4 9 39 131 176 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 9 38 130 175 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 10 38 129 174 -7.902 -0.022 -6.556 1.449 -1.550 -1.431 -0.843 D 4 2 3 5 3 5 33 126 171 -6.174 -1.687 -0.566 IL 5 5 3 5 3 8 38 129 174 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 9 37 128 173 -7.902 -0.022 -6.556 1.690 -2.245 -1.890 -1.775 D 7 5 3 8 3 5 32 126 171 -6.174 -1.687 -0.566 IL 8 8 3 8 3 8 37 128 173 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 5 9 37 127 172 -4.141 -0.115 -6.854 -7.066 -7.958 -0.666 -0.920 -0.997 1.227 D 10 8 3 11 5 5 31 125 170 -4.959 -0.803 -4.221 -2.596 -2.508 IL 11 11 3 11 5 7 35 127 172 -1.979 -0.588 -4.426 -6.259 -5.532 0.000 0.000 0.000 0.000 [ MATP 4 ] 6 127 c g - - MP 12 11 3 16 6 10 36 126 170 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -2.340 -2.380 -0.686 1.122 -2.162 -3.286 2.292 -2.620 -2.518 1.138 -3.053 -0.674 1.377 -2.619 0.273 -1.583 ML 13 11 3 16 6 6 32 124 169 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 6 32 123 168 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 3 28 121 165 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 7 34 125 170 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 7 34 125 170 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 7 126 u a - - MP 18 17 6 22 6 9 34 124 168 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.670 -3.576 -3.539 0.126 -2.505 -4.106 2.055 -3.208 -3.560 0.412 -3.943 -1.557 2.850 -3.808 -0.191 -2.434 ML 19 17 6 22 6 6 31 122 167 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 5 30 122 167 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 3 28 119 164 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 6 32 123 168 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 6 32 123 168 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 8 125 G C - - MP 24 23 6 28 4 8 32 122 166 -6.880 -7.087 -0.056 -5.501 -4.623 -3.037 -4.712 0.279 -5.065 -4.647 -0.459 -4.945 -4.249 3.608 -4.595 -0.732 -0.848 -4.389 -2.490 -3.590 ML 25 23 6 28 4 5 30 121 166 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 4 29 120 165 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 3 27 119 164 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 6 31 122 167 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 6 31 121 166 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 9 - A - - - ML 30 29 6 32 3 7 30 120 164 -7.902 -0.022 -6.556 1.690 -2.245 -1.890 -1.775 D 31 29 6 32 3 3 27 117 162 -6.174 -1.687 -0.566 IL 32 32 3 32 3 6 30 120 165 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - a - - - ML 33 32 3 35 3 6 29 119 163 -7.902 -0.022 -6.556 0.716 -1.339 0.451 -0.749 D 34 32 3 35 3 2 26 116 161 -6.174 -1.687 -0.566 IL 35 35 3 35 3 5 29 119 164 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 11 - C - - - ML 36 35 3 38 3 6 28 118 162 -7.902 -0.022 -6.556 -1.590 1.581 -2.408 -1.034 D 37 35 3 38 3 2 25 115 160 -6.174 -1.687 -0.566 IL 38 38 3 38 3 5 28 118 163 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 12 - A - - - ML 39 38 3 41 3 5 27 117 161 -7.902 -0.022 -6.556 1.690 -2.245 -1.890 -1.775 D 40 38 3 41 3 2 25 115 160 -6.174 -1.687 -0.566 IL 41 41 3 41 3 5 28 117 162 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - A - - - ML 42 41 3 44 3 5 27 116 160 -8.296 -0.019 -6.614 1.690 -2.245 -1.890 -1.775 D 43 41 3 44 3 2 24 114 159 -5.620 -0.734 -1.403 IL 44 44 3 44 3 4 27 116 161 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 124 - A - - MR 45 44 3 47 3 4 26 115 159 -8.296 -0.019 -6.614 1.690 -2.245 -1.890 -1.775 D 46 44 3 47 3 1 23 113 157 -6.390 -1.568 -0.620 IR 47 47 3 47 3 4 26 115 160 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 123 - G - - MR 48 47 3 50 3 3 25 114 158 -8.296 -0.019 -6.614 -1.446 -2.645 1.691 -2.031 D 49 47 3 50 3 1 22 112 157 -6.390 -1.568 -0.620 IR 50 50 3 50 3 3 25 114 159 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 122 - A - - MR 51 50 3 53 3 3 24 113 157 -8.296 -0.019 -6.614 1.690 -2.245 -1.890 -1.775 D 52 50 3 53 3 1 22 111 156 -6.390 -1.568 -0.620 IR 53 53 3 53 3 3 24 113 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 121 - G - - MR 54 53 3 56 2 2 23 112 156 -8.281 -0.005 -1.446 -2.645 1.691 -2.031 D 55 53 3 56 2 1 22 111 156 -4.432 -0.068 IR 56 56 3 56 2 2 23 112 157 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 16 ] - - - - - - B 57 56 3 139 58 1 22 111 155 [ BEGR 53 ] - - - - - - S 58 57 1 59 3 0 0 64 109 -7.902 -0.022 -6.556 IL 59 59 2 59 3 1 1 66 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 73 - A - - - ML 60 59 2 62 5 1 1 64 109 -7.039 -0.041 -6.854 -7.066 -7.958 1.690 -2.245 -1.890 -1.775 D 61 59 2 62 5 0 0 62 107 -4.959 -0.803 -4.221 -2.596 -2.508 IL 62 62 3 62 5 1 1 64 109 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 74 120 g u - - MP 63 62 3 67 6 2 2 63 108 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.538 -2.337 -3.698 1.181 -4.350 -5.075 0.029 -3.732 -3.382 1.463 -3.899 2.996 -0.331 -4.299 -1.912 -2.415 ML 64 62 3 67 6 1 1 61 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 1 61 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 0 57 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 62 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 62 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 75 119 C G - - MP 69 68 6 73 6 2 2 61 106 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -4.425 -4.320 -4.136 -0.564 -2.882 -4.564 3.511 -3.679 -4.181 -0.305 -4.455 -2.266 0.645 -4.503 -0.585 -3.025 ML 70 68 6 73 6 1 1 59 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 59 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 55 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 60 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 60 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 76 118 a u - - MP 75 74 6 79 6 2 2 59 104 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.394 -2.479 -3.463 2.825 -3.810 -4.616 0.492 -3.621 -3.384 2.019 -3.910 -0.035 0.163 -3.811 -1.445 -2.326 ML 76 74 6 79 6 1 1 57 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 57 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 53 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 58 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 58 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 77 117 G C - - MP 81 80 6 85 6 2 2 57 102 -9.082 -9.021 -0.096 -4.201 -8.078 -8.473 -4.174 -2.792 -4.225 0.633 -4.798 -4.533 -0.216 -4.558 -4.007 3.444 -4.386 0.185 -0.518 -4.073 -2.217 -3.122 ML 82 80 6 85 6 1 1 55 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 55 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 51 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 56 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 56 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 78 116 a u - - MP 87 86 6 91 6 2 2 55 100 -9.008 -8.947 -0.163 -5.791 -4.243 -4.976 -1.328 -2.177 -2.514 1.988 -2.431 -3.349 1.434 -2.752 -2.576 1.683 -3.098 -0.265 1.326 -2.646 -0.353 -1.615 ML 88 86 6 91 6 1 1 54 99 -6.974 -7.320 -0.647 -1.729 -7.170 -4.699 0.597 -0.603 -0.649 0.253 MR 89 86 6 91 6 1 1 53 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 49 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 55 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 54 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 79 115 g c - - MP 93 92 6 97 6 2 2 53 98 -8.951 -8.891 -0.095 -7.667 -5.116 -5.267 -1.256 -1.845 -2.013 1.333 -1.964 -1.834 1.548 -2.316 -2.076 1.624 -2.614 -0.248 1.551 -2.129 -0.062 -1.209 ML 94 92 6 97 6 1 1 52 96 -6.471 -6.817 -1.035 -1.226 -6.667 -4.196 0.228 -0.649 0.367 -0.149 MR 95 92 6 97 6 1 1 52 97 -7.599 -6.328 -0.843 -6.306 -1.440 -4.519 1.127 -1.008 -0.754 -0.463 D 96 92 6 97 6 0 0 47 92 -9.590 -8.289 -4.086 -4.768 -4.785 -0.212 IL 97 97 5 97 6 1 1 53 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 52 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 80 114 g c - - MP 99 98 6 103 6 2 2 51 96 -8.976 -8.915 -0.047 -7.692 -7.971 -5.699 -3.057 -2.624 -3.070 0.972 -2.640 -3.791 1.913 -3.098 -3.135 2.184 -3.586 -0.495 1.540 -3.181 -0.310 -2.018 ML 100 98 6 103 6 1 1 49 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 49 94 -7.318 -6.047 -1.113 -6.025 -1.159 -4.238 -0.005 0.381 -0.700 0.119 D 102 98 6 103 6 0 0 44 89 -9.899 -8.598 -4.395 -5.077 -5.094 -0.168 IL 103 103 5 103 6 1 1 51 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 50 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 81 113 c g - - MP 105 104 6 109 6 2 2 49 94 -8.988 -8.927 -0.023 -7.703 -7.983 -8.378 -2.881 -2.619 -2.939 1.322 -2.468 -3.714 2.044 -2.948 -2.973 1.612 -3.463 -0.567 1.739 -3.075 -0.178 -1.898 ML 106 104 6 109 6 1 1 48 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 47 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 42 87 -10.087 -8.785 -4.582 -5.265 -5.282 -0.147 IL 109 109 5 109 6 1 1 49 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 48 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 82 112 g c - - MP 111 110 6 115 6 2 2 47 92 -8.988 -8.927 -0.067 -5.576 -7.983 -5.919 -2.511 -2.189 -1.342 1.322 -2.562 -3.390 1.508 -2.876 -2.713 2.268 -3.208 -0.214 1.207 -2.683 -0.414 -1.688 ML 112 110 6 115 6 1 1 46 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 45 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 41 85 -10.087 -8.785 -4.582 -5.265 -5.282 -0.147 IL 115 115 5 115 6 1 1 47 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 46 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 83 111 c g - - MP 117 116 6 121 4 2 2 45 90 -2.874 -2.785 -0.537 -5.094 -2.886 -2.718 -2.915 0.838 -2.303 -3.631 2.116 -2.855 -2.950 1.522 -3.416 -0.741 1.598 -3.075 0.946 -1.886 ML 118 116 6 121 4 1 1 45 90 -2.375 -4.139 -0.705 -2.868 0.072 -0.385 -0.522 0.572 MR 119 116 6 121 4 1 1 41 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 120 116 6 121 4 0 0 39 84 -5.694 -1.432 -1.784 -1.646 IL 121 121 5 121 4 1 1 48 93 -0.592 -2.296 -3.013 -6.751 0.000 0.000 0.000 0.000 IR 122 122 6 122 3 1 1 38 75 -0.712 -1.420 -5.977 0.000 0.000 0.000 0.000 [ MATL 65 ] 92 - u - - - ML 123 122 6 125 3 1 1 17 36 -7.902 -0.022 -6.556 0.039 -0.126 -0.331 0.335 D 124 122 6 125 3 0 0 17 36 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 93 - a - - - ML 126 125 3 128 3 1 1 16 35 -7.902 -0.022 -6.556 0.738 -0.365 -0.970 0.063 D 127 125 3 128 3 0 0 16 34 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 94 - a - - - ML 129 128 3 131 3 1 1 15 33 -7.902 -0.079 -4.349 0.448 -0.555 -0.688 0.416 D 130 128 3 131 3 0 0 14 33 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 95 - a - - - ML 132 131 3 134 3 1 1 13 32 -7.845 -0.334 -2.307 0.589 -1.029 0.245 -0.285 D 133 131 3 134 3 0 0 13 31 -6.597 -2.110 -0.400 IL 134 134 3 134 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 96 - a - - - ML 135 134 3 137 2 1 1 1 1 * 0.000 0.333 -0.783 0.181 0.036 D 136 134 3 137 2 0 0 0 0 * 0.000 IL 137 137 3 137 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 138 137 3 -1 0 0 0 0 0 [ BEGL 17 ] - - - - - - S 139 57 1 140 1 0 8 70 97 0.000 [ BIF 18 ] - - - - - - B 140 139 1 141 212 0 8 70 97 [ BEGL 19 ] - - - - - - S 141 140 1 142 4 0 0 46 73 -0.046 -6.800 -6.207 -6.847 [ MATP 20 ] 14 43 G C - - MP 142 141 1 146 6 2 2 46 73 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -4.623 -3.037 -4.712 0.279 -5.065 -4.647 -0.459 -4.945 -4.249 3.608 -4.595 -0.732 -0.848 -4.389 -2.490 -3.590 ML 143 141 1 146 6 1 1 45 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 144 141 1 146 6 1 1 44 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 145 141 1 146 6 0 0 42 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 146 146 5 146 6 1 1 46 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 147 147 6 147 5 1 1 45 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 15 42 C G - - MP 148 147 6 152 4 2 2 44 71 -6.802 -8.048 -0.229 -2.902 -3.916 -3.865 -3.715 -0.129 -2.549 -4.206 3.222 -3.306 -3.744 0.119 -4.082 -1.872 1.053 -4.015 0.511 -2.603 ML 149 147 6 152 4 1 1 43 70 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 150 147 6 152 4 1 1 43 70 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 151 147 6 152 4 0 0 41 68 -12.737 -14.007 -2.036 -0.404 IL 152 152 5 152 4 1 1 43 70 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 153 153 6 153 3 1 1 44 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 41 - A - - MR 154 153 6 156 5 1 1 42 69 -6.921 -0.044 -6.736 -6.948 -7.840 1.617 -1.973 -1.645 -1.479 D 155 153 6 156 5 0 0 41 68 -5.815 -0.476 -3.442 -4.873 -2.867 IR 156 156 3 156 5 1 1 42 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 16 40 g c - - MP 157 156 3 161 4 2 2 41 68 -6.802 -8.048 -0.229 -2.902 -3.307 -2.472 -3.315 1.083 -3.450 -4.018 0.942 -3.598 -3.421 2.827 -3.845 0.213 1.089 -3.333 -1.034 -2.275 ML 158 156 3 161 4 1 1 40 67 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 159 156 3 161 4 1 1 40 67 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 160 156 3 161 4 0 0 38 65 -12.737 -14.007 -2.036 -0.404 IL 161 161 5 161 4 1 1 40 67 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 162 162 6 162 3 1 1 41 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 39 - G - - MR 163 162 6 165 5 1 1 39 66 -6.921 -0.044 -6.736 -6.948 -7.840 -1.154 -2.302 1.603 -1.686 D 164 162 6 165 5 0 0 38 65 -5.815 -0.476 -3.442 -4.873 -2.867 IR 165 165 3 165 5 1 1 39 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 38 g c - - MP 166 165 3 170 6 2 2 38 65 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.498 -2.374 -3.605 1.136 -4.205 -4.605 0.185 -3.799 -3.442 2.504 -3.921 2.270 -0.103 -3.882 -1.756 -2.430 ML 167 165 3 170 6 1 1 36 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 168 165 3 170 6 1 1 36 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 169 165 3 170 6 0 0 34 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 170 170 5 170 6 1 1 38 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 171 171 6 171 5 1 1 37 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 37 u a - - MP 172 171 6 176 6 2 2 36 63 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.245 -3.085 -3.245 0.934 -2.499 -3.963 1.946 -3.088 -3.253 0.915 -3.716 -1.035 2.537 -3.447 -0.194 -2.164 ML 173 171 6 176 6 1 1 34 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 174 171 6 176 6 1 1 34 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 175 171 6 176 6 0 0 32 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 176 176 5 176 6 1 1 36 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 177 177 6 177 5 1 1 35 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 36 G C - - MP 178 177 6 182 6 2 2 34 61 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.658 -2.554 -3.682 1.707 -4.120 -4.385 0.344 -3.978 -3.653 3.065 -4.084 -0.190 0.028 -3.734 -1.629 -2.586 ML 179 177 6 182 6 1 1 32 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 180 177 6 182 6 1 1 32 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 181 177 6 182 6 0 0 30 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 182 182 5 182 6 1 1 34 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 183 183 6 183 5 1 1 33 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 35 g c - - MP 184 183 6 188 6 2 2 32 59 -9.082 -9.021 -0.055 -7.798 -8.078 -5.296 -2.614 -2.380 -2.711 1.548 -1.512 -3.507 1.709 -2.897 -2.790 2.062 -3.296 -0.429 1.220 -2.812 -0.326 -1.768 ML 185 183 6 188 6 1 1 30 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 186 183 6 188 6 1 1 30 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 187 183 6 188 6 0 0 28 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 188 188 5 188 6 1 1 32 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 189 189 6 189 5 1 1 31 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 34 a u - - MP 190 189 6 194 4 2 2 30 57 -6.789 -1.621 -1.107 -2.309 -3.192 -2.581 -3.230 2.628 -3.073 -4.156 1.172 -3.301 -3.229 1.534 -3.723 -0.290 1.080 -3.485 -0.778 -2.161 ML 191 189 6 194 4 1 1 28 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 192 189 6 194 4 1 1 28 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 193 189 6 194 4 0 0 26 53 -5.004 -4.685 -2.701 -0.366 IL 194 194 5 194 4 1 1 30 57 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 195 195 6 195 3 1 1 30 56 -0.996 -1.071 -5.462 0.000 0.000 0.000 0.000 [ MATL 30 ] 22 - u - - - ML 196 195 6 198 3 1 1 22 42 -2.056 -0.423 -6.213 -0.090 -0.264 -0.965 0.779 D 197 195 6 198 3 0 0 17 37 -7.696 -0.396 -2.087 IL 198 198 3 198 3 1 1 22 42 -1.322 -0.818 -4.941 0.000 0.000 0.000 0.000 [ MATL 31 ] 25 - a - - - ML 199 198 3 201 3 1 1 16 35 -7.902 -0.022 -6.556 0.271 -0.547 -0.142 0.266 D 200 198 3 201 3 0 0 16 34 -6.174 -1.687 -0.566 IL 201 201 3 201 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 26 - u - - - ML 202 201 3 204 3 1 1 15 33 -7.902 -0.022 -6.556 -0.225 -0.799 -0.804 0.998 D 203 201 3 204 3 0 0 15 33 -6.174 -1.687 -0.566 IL 204 204 3 204 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 27 - a - - - ML 205 204 3 207 3 1 1 13 32 -7.902 -0.269 -2.594 0.383 -0.883 0.136 0.077 D 206 204 3 207 3 0 0 13 32 -6.174 -1.687 -0.566 IL 207 207 3 207 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - a - - - ML 208 207 3 210 2 1 1 1 1 * 0.000 0.646 0.032 -0.909 -0.185 D 209 207 3 210 2 0 0 0 0 * 0.000 IL 210 210 3 210 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 211 210 3 -1 0 0 0 0 0 [ BEGR 36 ] - - - - - - S 212 140 1 213 3 0 0 42 66 -7.902 -0.022 -6.556 IL 213 213 2 213 3 1 1 44 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 44 - C - - - ML 214 213 2 216 3 1 1 42 66 -7.902 -0.022 -6.556 -1.175 1.358 -1.991 -0.430 D 215 213 2 216 3 0 0 40 64 -6.174 -1.687 -0.566 IL 216 216 3 216 3 1 1 43 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 45 - g - - - ML 217 216 3 219 3 1 1 41 65 -7.902 -0.022 -6.556 -0.302 0.154 0.335 -0.295 D 218 216 3 219 3 0 0 39 63 -6.174 -1.687 -0.566 IL 219 219 3 219 3 1 1 42 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 46 - G - - - ML 220 219 3 222 5 1 1 40 63 -7.039 -0.041 -6.854 -7.066 -7.958 -1.446 -2.645 1.691 -2.031 D 221 219 3 222 5 0 0 38 62 -4.959 -0.803 -4.221 -2.596 -2.508 IL 222 222 3 222 5 1 1 40 64 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 47 72 G C - - MP 223 222 3 227 6 2 2 39 63 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -4.122 -2.784 -4.163 1.001 -4.637 -4.527 -0.073 -4.460 -3.969 3.411 -4.355 -0.441 -0.405 -4.051 -2.078 -3.054 ML 224 222 3 227 6 1 1 37 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 225 222 3 227 6 1 1 37 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 226 222 3 227 6 0 0 35 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 227 227 5 227 6 1 1 38 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 228 228 6 228 5 1 1 38 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 48 71 c g - - MP 229 228 6 233 6 2 2 37 61 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.577 -3.498 -3.469 0.220 -2.453 -4.057 2.522 -3.150 -3.484 0.492 -3.882 -1.482 2.424 -3.722 -0.133 -2.362 ML 230 228 6 233 6 1 1 35 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 231 228 6 233 6 1 1 35 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 232 228 6 233 6 0 0 33 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 233 233 5 233 6 1 1 36 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 234 234 6 234 5 1 1 36 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 49 70 c g - - MP 235 234 6 239 6 2 2 35 59 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -3.071 -2.962 -3.111 0.680 -2.424 -3.859 2.191 -2.998 -3.118 1.263 -3.605 -0.961 2.124 -3.281 0.346 -2.042 ML 236 234 6 239 6 1 1 33 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 237 234 6 239 6 1 1 33 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 238 234 6 239 6 0 0 31 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 239 239 5 239 6 1 1 34 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 240 240 6 240 5 1 1 34 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 50 69 a u - - MP 241 240 6 245 6 2 2 33 57 -9.082 -9.021 -0.021 -7.798 -8.078 -8.473 -2.984 -2.497 -3.037 2.111 -2.865 -3.848 1.503 -3.185 -3.104 1.923 -3.585 -0.342 1.197 -3.159 -0.576 -2.017 ML 242 240 6 245 6 1 1 31 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 243 240 6 245 6 1 1 31 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 244 240 6 245 6 0 0 29 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 245 245 5 245 6 1 1 32 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 246 246 6 246 5 1 1 32 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 51 68 c g - - MP 247 246 6 251 6 2 2 31 55 -9.082 -9.021 -0.111 -7.798 -8.078 -4.013 -3.203 -3.076 -3.214 0.934 -2.453 -3.935 2.356 -3.051 -3.218 0.921 -3.687 -1.044 2.161 -3.403 -0.140 -2.126 ML 248 246 6 251 6 1 1 29 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 249 246 6 251 6 1 1 29 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 250 246 6 251 6 0 0 27 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 251 251 5 251 6 1 1 31 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 252 252 6 252 5 1 1 30 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 52 67 c g - - MP 253 252 6 257 6 2 2 29 53 -8.994 -8.933 -0.047 -7.710 -7.990 -5.709 -2.947 -2.716 -2.986 1.469 -2.432 -3.734 2.165 -2.949 -3.017 1.366 -3.493 -0.679 1.704 -3.142 -0.146 -1.943 ML 254 252 6 257 6 1 1 27 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 255 252 6 257 6 1 1 27 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 256 252 6 257 6 0 0 24 48 -10.037 -8.735 -4.532 -5.214 -5.232 -0.152 IL 257 257 5 257 6 1 1 29 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 258 258 6 258 5 1 1 28 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 53 66 c g - - MP 259 258 6 263 4 2 2 27 51 -3.522 -2.971 -0.400 -5.178 -2.899 -2.547 -2.952 1.376 -2.553 -3.723 2.042 -2.996 -2.997 1.842 -3.477 -0.454 1.447 -3.074 -0.251 -1.910 ML 260 258 6 263 4 1 1 26 49 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 261 258 6 263 4 1 1 25 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 262 258 6 263 4 0 0 23 47 -5.676 -5.357 -0.661 -1.628 IL 263 263 5 263 4 1 1 28 51 -1.416 -1.751 -1.712 -5.449 0.000 0.000 0.000 0.000 IR 264 264 6 264 3 1 1 26 50 -1.127 -0.972 -4.955 0.000 0.000 0.000 0.000 [ MATL 47 ] 56 - u - - - ML 265 264 6 267 3 1 1 18 36 -7.902 -0.022 -6.556 0.186 -0.521 -0.147 0.336 D 266 264 6 267 3 0 0 17 36 -6.174 -1.687 -0.566 IL 267 267 3 267 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 57 - a - - - ML 268 267 3 270 3 1 1 16 35 -7.902 -0.022 -6.556 0.690 -0.751 -0.128 -0.189 D 269 267 3 270 3 0 0 16 34 -6.174 -1.687 -0.566 IL 270 270 3 270 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 58 - a - - - ML 271 270 3 273 3 1 1 15 33 -7.902 -0.022 -6.556 0.491 -0.792 -0.380 0.321 D 272 270 3 273 3 0 0 15 33 -6.174 -1.687 -0.566 IL 273 273 3 273 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 59 - a - - - ML 274 273 3 276 3 1 1 13 32 -7.902 -0.217 -2.882 0.388 -0.426 -0.228 0.128 D 275 273 3 276 3 0 0 13 32 -6.174 -1.687 -0.566 IL 276 276 3 276 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 60 - a - - - ML 277 276 3 279 2 1 1 1 1 * 0.000 0.490 0.039 -0.612 -0.129 D 278 276 3 279 2 0 0 0 0 * 0.000 IL 279 279 3 279 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 280 279 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME NiCo-AnGGAG ACC RF03164 DESC NiCo-AnGGAG riboswitch aptamer LENG 89 MAXL 179 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 09:38:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03164/CM NSEQ 13 EFFN 4.706787 CKSUM 3285618749 STATS LOCAL MSV -8.6658 0.71870 STATS LOCAL VITERBI -10.1889 0.71870 STATS LOCAL FORWARD -3.0206 0.71870 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.28291 1.50204 1.26055 1.52972 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 0.00000 * 1 0.19406 3.11744 3.09193 2.44524 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 2 0.06208 4.10599 3.75776 3.89292 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 3 2.51160 2.59968 2.38207 0.28475 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.11495 2.35252 4.30775 0.79301 0.60236 1.09861 0.40547 4 1.52827 0.89555 2.01109 1.42352 6 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 5 3.29686 1.49649 3.10438 0.36495 7 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 6 3.16136 4.06973 0.08065 4.01541 8 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 7 0.06208 4.10599 3.75776 3.89292 9 A - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 8 0.76280 2.95636 0.90015 2.58861 10 a - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 9 3.85732 0.07564 4.37747 3.23982 11 C - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 10 0.06208 4.10599 3.75776 3.89292 12 A - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 11 0.06208 4.10599 3.75776 3.89292 13 A - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 12 3.17673 4.09354 0.07890 4.04772 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 13 3.44715 0.29121 3.26303 1.70083 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 14 2.05437 2.51912 0.46820 1.80079 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 15 2.29509 3.53813 0.18272 3.29200 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 16 2.08382 1.53027 2.40484 0.56425 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 17 1.36568 3.07150 0.43957 2.91636 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 18 1.39043 1.53250 0.99626 1.79709 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.11495 4.30775 2.35252 1.46634 0.26236 1.09861 0.40547 19 0.45664 2.46886 2.01332 1.90807 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.32002 4.22255 1.35014 1.46634 0.26236 2.20448 0.11688 20 1.59660 1.59622 2.33684 0.69691 22 u - - _ 1.38629 1.38629 1.38629 1.38629 0.55491 0.90025 3.94212 0.62592 0.76522 0.08087 2.55510 21 1.19593 1.85735 1.42076 1.20410 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 22 1.75711 2.33335 2.11462 0.49461 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 23 1.10198 2.26536 1.16981 1.37213 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.21920 4.30775 1.69623 1.46634 0.26236 1.09861 0.40547 24 0.79984 1.22581 2.35890 1.81675 28 a - - _ 1.38629 1.38629 1.38629 1.38629 0.78804 0.84243 2.16630 0.99697 0.46044 0.13702 2.05539 25 2.03510 2.27425 2.29257 0.40729 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.02976 4.22255 4.22255 1.46634 0.26236 0.24925 1.51133 26 1.87019 1.08511 1.49846 1.25678 35 c - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 27 3.15783 0.49114 2.88721 1.23849 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 28 0.62492 2.58883 1.39738 1.94950 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 29 3.53196 1.15726 3.36654 0.47498 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.17202 4.30775 1.93397 1.46634 0.26236 1.09861 0.40547 30 3.29134 4.23722 0.07693 3.79889 39 G - - - 1.38629 1.38629 1.38629 1.38629 0.03148 4.16721 4.16721 1.46634 0.26236 0.17080 1.85143 31 1.93171 0.58652 2.34584 1.59419 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.17202 4.30775 1.93397 1.46634 0.26236 1.09861 0.40547 32 0.08173 3.84104 3.51137 3.60620 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.03148 4.16721 4.16721 1.46634 0.26236 0.17080 1.85143 33 2.46525 3.41021 0.17343 3.18924 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 34 4.13382 0.09891 3.91815 2.84259 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 35 3.18782 0.19413 3.78530 2.18491 44 C - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 36 2.04745 1.09731 0.89592 2.04844 45 g - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 37 3.53515 4.50412 0.05938 4.04921 46 G - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 38 2.14294 3.54554 0.19706 3.42039 47 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 39 3.07458 0.90770 2.85076 0.70818 48 u - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 40 2.36834 1.18449 1.80159 0.83143 49 u - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 41 0.94343 1.78014 1.34651 1.70403 50 a - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 42 2.05356 1.01646 2.24249 0.90720 51 u - - < 1.38629 1.38629 1.38629 1.38629 0.27528 4.30775 1.48204 1.46634 0.26236 1.09861 0.40547 43 1.48366 1.11672 1.89199 1.22054 52 c - - < 1.38629 1.38629 1.38629 1.38629 0.10795 4.06732 2.46266 1.46634 0.26236 2.93773 0.05444 44 1.60815 1.19373 1.36983 1.41675 53 c - - < 1.38629 1.38629 1.38629 1.38629 0.16040 2.04158 3.99680 0.79301 0.60236 0.09160 2.43576 45 1.27687 1.83431 1.41776 1.14222 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 46 0.81372 2.04434 1.42799 1.67378 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 47 0.97839 2.18168 1.66601 1.13249 58 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 48 1.08720 1.70608 1.51009 1.34563 59 a - - _ 1.38629 1.38629 1.38629 1.38629 0.23372 4.30775 1.63502 1.46634 0.26236 1.09861 0.40547 49 0.96723 1.22786 1.92774 1.70667 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.78948 1.30594 1.29097 0.89038 0.52848 0.46524 0.98882 50 1.61534 1.49469 1.07337 1.44815 66 g - - > 1.38629 1.38629 1.38629 1.38629 0.03744 3.99680 3.99680 1.46634 0.26236 1.52426 0.24562 51 1.38248 2.05942 1.00340 1.36694 67 g - - > 1.38629 1.38629 1.38629 1.38629 0.03485 4.06732 4.06732 1.46634 0.26236 0.11202 2.24458 52 1.00794 2.41930 0.92601 1.89769 68 g - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 53 1.88679 1.47038 1.63403 0.85929 69 u - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 54 1.03884 1.92724 0.96028 2.13877 70 g - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 55 0.77512 3.01762 0.84076 2.82929 71 a - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 56 3.63015 0.22661 3.36722 1.95356 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 57 0.06208 4.10599 3.75776 3.89292 73 A - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 58 2.37296 3.71542 0.15949 3.51085 74 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 59 4.15653 0.09365 4.02144 2.88575 75 C - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 60 0.38019 3.39683 1.41971 3.19402 76 A - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 61 2.77245 3.68843 0.12326 3.55976 77 G - - < 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 62 0.90984 1.83936 1.60147 1.44015 78 a - - < 1.38629 1.38629 1.38629 1.38629 0.34729 4.30775 1.27320 1.46634 0.26236 1.09861 0.40547 63 1.46085 1.51360 1.39181 1.20657 79 u - - < 1.38629 1.38629 1.38629 1.38629 0.28897 3.99786 1.45841 1.46634 0.26236 0.52748 0.89182 64 2.04890 1.36459 1.02752 1.35578 80 g - - < 1.38629 1.38629 1.38629 1.38629 0.11616 4.01201 2.39067 1.46634 0.26236 1.13651 0.38704 65 1.64473 1.22542 1.59321 1.17109 81 u - - < 1.38629 1.38629 1.38629 1.38629 0.03555 4.04766 4.04766 1.46634 0.26236 2.99621 0.05127 66 1.52265 1.75048 0.87092 1.66279 82 g - - < 1.38629 1.38629 1.38629 1.38629 0.09951 4.04766 2.56067 1.46634 0.26236 2.99621 0.05127 67 2.10982 1.24906 1.58223 0.95075 83 u - - < 1.38629 1.38629 1.38629 1.38629 0.33899 1.31328 3.98601 1.56868 0.23360 0.08921 2.46101 68 1.43053 1.40981 1.57882 1.16987 92 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 69 0.73228 1.65229 2.37833 1.44872 93 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 70 1.00428 1.89802 1.97062 1.06579 94 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08615 4.30775 2.67252 1.46634 0.26236 1.09861 0.40547 71 0.91087 2.43316 1.06912 1.79123 95 a - - _ 1.38629 1.38629 1.38629 1.38629 0.29007 4.25053 1.43746 1.46634 0.26236 0.32917 1.27125 72 1.16263 2.12064 1.11949 1.42323 96 g - - _ 1.38629 1.38629 1.38629 1.38629 0.75735 0.66547 4.07094 1.22582 0.34746 0.69443 0.69187 73 1.52107 1.68689 0.80417 1.90402 111 g - - > 1.38629 1.38629 1.38629 1.38629 0.19154 4.20365 1.83649 1.46634 0.26236 2.33626 0.10169 74 1.85726 0.96857 1.44930 1.47168 112 c - - > 1.38629 1.38629 1.38629 1.38629 0.03555 4.04766 4.04766 1.46634 0.26236 2.99621 0.05127 75 1.32272 1.73435 1.10127 1.49332 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.03555 4.04766 4.04766 1.46634 0.26236 1.37487 0.29152 76 1.53759 1.07078 1.28181 1.80288 114 c - - > 1.38629 1.38629 1.38629 1.38629 0.09260 4.11616 2.62916 1.46634 0.26236 0.88127 0.53487 77 1.12832 1.56871 1.44532 1.45912 115 a - - > 1.38629 1.38629 1.38629 1.38629 0.27617 4.15115 1.48914 1.46634 0.26236 0.15698 1.92907 78 1.50644 1.73384 1.63770 0.89828 116 u - - > 1.38629 1.38629 1.38629 1.38629 0.03337 4.11002 4.11002 1.46634 0.26236 0.13069 2.09955 79 3.75970 0.20479 3.52010 2.02271 117 C - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 80 3.40511 1.59030 3.18900 0.32612 118 U - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 81 3.17131 4.18408 0.07994 3.92987 119 G - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 82 3.71072 2.58242 3.49515 0.13972 120 U - - > 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 83 3.53515 4.50412 0.05938 4.04921 121 G - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 84 0.06208 4.10599 3.75776 3.89292 122 A - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 85 3.53515 4.50412 0.05938 4.04921 123 G - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 86 0.06208 4.10599 3.75776 3.89292 124 A - - , 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 87 4.16244 0.09775 3.93303 2.84788 125 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 88 0.40733 3.27079 1.38779 3.05822 126 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02730 4.30775 4.30775 1.46634 0.26236 1.09861 0.40547 89 1.82343 2.18242 0.60366 1.72061 127 G - - ) 1.38629 1.38629 1.38629 1.38629 0.01374 4.29419 * 1.46634 0.26236 0.00000 * //