INFERNAL1/a [1.1.5 | Sep 2023] NAME L31-Actinobacteria ACC RF03158 DESC L31-Actinobacteria ribosomal protein leader STATES 148 NODES 34 CLEN 48 W 141 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 19:19:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/R-scape_updates/RF03158/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 971 EFFN 48.482586 CKSUM 485013958 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.00 NC 34.90 EFP7GF -25.1669 0.72115 ECMLC 0.54824 -7.31571 4.05267 1600000 610905 0.001964 ECMGC 0.44975 -16.23256 -2.64262 1600000 180514 0.002216 ECMLI 0.61677 -4.74631 4.84192 1600000 444107 0.002702 ECMGI 0.48489 -11.90790 -0.04350 1600000 126046 0.003173 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 141 246 -10.778 -10.985 -0.024 -6.008 IL 1 1 2 1 4 1 12 143 248 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 12 142 248 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 12 141 246 -11.675 -0.002 -10.329 -1.191 0.489 -0.829 0.674 D 4 2 3 5 3 0 6 139 245 -7.616 -0.422 -2.008 IL 5 5 3 5 3 1 10 141 247 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 5 1 11 140 245 -10.643 -0.038 -5.361 -10.671 -11.563 -1.563 1.601 -2.456 -1.167 D 7 5 3 8 5 0 5 138 243 -4.959 -0.803 -4.221 -2.596 -2.508 IL 8 8 3 8 5 1 8 140 245 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 141 G C - - MP 9 8 3 13 6 2 10 139 244 -11.672 -11.611 -0.004 -10.388 -10.667 -11.062 -7.861 -4.011 -8.003 -1.724 -8.942 -3.723 -3.845 -8.598 -2.276 3.871 -7.377 -1.267 -3.257 -3.502 -5.955 -6.979 ML 10 8 3 13 6 1 7 138 243 -7.700 -8.046 -0.356 -2.455 -7.896 -5.426 0.640 0.040 -0.909 -0.182 MR 11 8 3 13 6 1 6 137 242 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 4 134 239 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 7 138 243 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 7 138 243 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 140 G C - - MP 15 14 6 19 6 2 8 137 242 -4.553 -11.642 -0.067 -9.575 -10.699 -11.094 -9.658 -6.265 -12.037 -1.959 -11.260 -2.358 -5.555 -11.493 -7.637 3.938 -7.826 -2.756 -5.923 -7.887 -8.005 -11.197 ML 16 14 6 19 6 1 6 135 241 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 5 135 240 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 3 133 238 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 7 136 241 -4.390 -4.653 -0.179 -6.308 -7.085 -6.745 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 6 136 241 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 139 u a - - MP 21 20 6 25 4 2 6 135 240 -10.777 -6.085 -0.044 -6.082 -6.013 -5.736 -6.020 -0.961 -3.575 -6.862 2.556 -4.793 -5.887 -0.588 -6.402 -3.331 2.621 -4.693 1.111 -1.811 ML 22 20 6 25 4 1 5 134 239 -3.807 -3.990 -0.486 -2.719 0.277 -0.366 -0.294 0.259 MR 23 20 6 25 4 1 4 134 239 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 3 132 238 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 5 135 240 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 5 134 240 -1.964 -0.506 -4.664 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - U - - - ML 27 26 6 29 3 1 4 133 238 -11.976 -0.536 -1.689 -0.693 -0.346 -3.002 1.304 D 28 26 6 29 3 0 3 132 237 -6.610 -0.323 -2.393 IL 29 29 3 29 3 1 5 134 239 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 137 - G - - MR 30 29 3 32 3 1 4 132 238 -11.470 -0.079 -4.241 -5.658 -7.233 1.966 -3.880 D 31 29 3 32 3 0 3 131 237 -11.422 -0.084 -4.146 IR 32 32 3 32 3 1 4 133 238 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 136 - C - - MR 33 32 3 35 5 1 5 131 237 -10.574 -0.003 -10.389 -10.601 -11.493 -2.095 1.748 -2.519 -2.104 D 34 32 3 35 5 0 0 130 235 -7.265 -0.157 -4.892 -6.322 -4.317 IR 35 35 3 35 5 1 1 131 237 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 135 C G - - MP 36 35 3 40 6 2 5 130 236 -11.703 -11.642 -0.003 -10.419 -10.699 -11.094 -9.023 -9.295 -8.015 -5.560 -6.342 -7.988 3.948 -7.636 -8.471 -5.529 -3.349 -7.703 -1.602 -8.877 -4.426 -7.272 ML 37 35 3 40 6 1 1 128 233 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 1 128 233 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 0 124 229 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 129 235 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 129 235 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 134 C G - - MP 42 41 6 46 6 2 5 128 234 -11.703 -11.642 -0.003 -10.419 -10.699 -11.094 -8.611 -8.886 -7.928 -5.122 -6.281 -8.073 3.923 -7.197 -8.033 -5.096 -8.151 -7.277 -0.622 -8.447 -3.985 -6.835 ML 43 41 6 46 6 1 1 126 232 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 126 231 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 123 228 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 127 233 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 127 233 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 10 133 G C - - MP 48 47 6 52 6 2 5 126 232 -11.703 -11.642 -0.003 -10.419 -10.699 -11.094 -9.511 -6.278 -11.271 -3.703 -10.842 -7.470 -5.412 -10.870 -7.631 3.950 -7.836 -4.190 -1.525 -7.921 -7.785 -10.185 ML 49 47 6 52 6 1 1 125 230 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 124 229 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 122 227 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 125 231 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 125 231 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 132 G C - - MP 54 53 6 58 4 2 4 124 230 -10.778 -10.985 -0.004 -9.399 -9.589 -6.270 -11.681 -3.724 -11.199 -7.448 -5.550 -11.221 -7.634 3.981 -7.832 -4.193 -5.915 -7.909 -7.983 -10.670 ML 55 53 6 58 4 1 1 123 229 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 1 122 228 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 0 121 226 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 1 124 229 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 1 124 229 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - U - - - ML 60 59 6 62 3 1 3 122 228 -11.695 -0.002 -10.349 -7.740 -6.962 -8.742 1.995 D 61 59 6 62 3 0 0 120 225 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 1 123 228 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 63 62 3 65 3 1 2 121 227 -11.695 -0.002 -10.349 -7.740 -6.962 -8.742 1.995 D 64 62 3 65 3 0 0 119 224 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 1 122 227 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - C - - - ML 66 65 3 68 3 1 2 120 226 -11.695 -0.002 -10.349 -5.985 1.966 -4.199 -5.506 D 67 65 3 68 3 0 0 118 224 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 1 121 226 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 69 68 3 71 3 1 1 119 225 -11.995 -0.001 -10.313 1.918 -2.570 -5.377 -5.128 D 70 68 3 71 3 0 0 118 223 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 1 120 225 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 131 - C - - MR 72 71 3 74 3 1 1 118 224 -11.995 -0.006 -7.929 -6.516 1.957 -6.898 -3.351 D 73 71 3 74 3 0 0 116 221 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 119 224 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 130 - A - - MR 75 74 3 77 5 1 1 117 223 -10.639 -0.003 -10.454 -10.666 -11.558 1.993 -7.821 -7.103 -7.244 D 76 74 3 77 5 0 0 115 221 -5.607 -0.566 -3.233 -4.664 -2.659 IR 77 77 3 77 5 1 1 117 223 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 129 C G - - MP 78 77 3 82 6 2 2 116 222 -11.703 -11.642 -0.003 -10.419 -10.699 -11.094 -11.178 -11.420 -8.243 -8.149 -6.496 -7.806 3.995 -10.220 -11.037 -8.038 -7.835 -10.114 -6.041 -11.283 -7.026 -9.818 ML 79 77 3 82 6 1 1 114 219 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 114 219 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 108 214 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 115 221 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 115 221 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 128 G C - - MP 84 83 6 88 6 2 2 114 220 -11.703 -11.642 -0.010 -8.462 -8.252 -11.094 -6.605 -5.150 -6.464 -0.206 -3.118 -6.837 1.005 -6.986 -6.634 3.649 -6.896 -2.656 -2.794 -6.275 -4.439 -5.404 ML 85 83 6 88 6 1 1 112 218 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 112 217 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 106 212 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 113 219 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 113 219 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 127 c g - - MP 90 89 6 94 6 2 2 112 218 -11.696 -11.635 -0.043 -5.979 -6.709 -8.141 -2.661 -2.523 -3.410 -0.054 -2.586 -4.262 2.731 -3.751 -0.811 0.728 -1.970 -1.192 1.060 -3.207 1.172 -1.679 ML 91 89 6 94 6 1 1 111 216 -6.476 -6.822 -1.030 -1.231 -6.672 -4.201 0.104 -0.377 -0.486 0.527 MR 92 89 6 94 6 1 1 110 216 -7.235 -5.964 -1.215 -5.942 -1.076 -4.156 0.327 -0.042 -0.510 0.101 D 93 89 6 94 6 0 0 104 209 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 111 217 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 111 217 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 126 C G - - MP 96 95 6 100 6 2 2 110 216 -11.664 -11.603 -0.270 -4.436 -3.725 -4.377 -2.825 -2.933 -2.584 0.473 -2.160 -4.232 3.156 -2.808 -2.830 0.430 -3.273 -1.377 0.318 -2.842 0.262 -1.854 ML 97 95 6 100 6 1 1 109 215 -7.394 -7.740 -0.650 -1.653 -7.590 -5.119 0.131 -0.018 -0.705 0.382 MR 98 95 6 100 6 1 1 109 215 -7.686 -6.414 -1.094 -6.393 -1.114 -4.606 0.550 -0.642 -0.284 0.103 D 99 95 6 100 6 0 0 100 205 -9.443 -8.141 -3.938 -4.620 -4.638 -0.236 IL 100 100 5 100 6 1 1 110 215 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 110 215 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 125 c g - - MP 102 101 6 106 6 2 2 109 214 -11.431 -11.370 -0.352 -3.724 -5.284 -3.131 -2.554 -1.367 -2.760 0.461 -1.778 -0.635 2.225 -0.830 -2.679 1.977 -2.554 -0.868 0.725 -1.603 -0.583 -1.821 ML 103 101 6 106 6 1 1 108 213 -8.501 -8.847 -1.049 -1.011 -8.697 -6.226 0.382 -0.462 -0.137 0.086 MR 104 101 6 106 6 1 1 108 213 -9.639 -8.368 -0.634 -8.346 -1.566 -6.560 -0.126 0.624 -1.359 0.205 D 105 101 6 106 6 0 0 94 200 -11.648 -10.347 -6.144 -5.391 -6.843 -0.071 IL 106 106 5 106 6 1 1 109 214 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 108 214 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 124 c g - - MP 108 107 6 112 6 2 2 107 213 -11.246 -11.185 -0.155 -4.443 -5.822 -4.740 -2.191 -2.451 -2.843 0.417 -1.294 -1.383 2.110 -1.113 -2.514 2.055 -2.462 -0.633 1.202 -2.265 -0.688 -1.914 ML 109 107 6 112 6 1 1 106 212 -9.234 -9.580 -1.123 -0.921 -9.430 -6.960 0.164 -0.046 -0.600 0.323 MR 110 107 6 112 6 1 1 106 212 -8.988 -7.717 -0.859 -7.695 -1.250 -5.909 0.506 -0.275 -0.324 -0.067 D 111 107 6 112 6 0 0 91 197 -13.012 -11.711 -7.508 -8.190 -8.207 -0.018 IL 112 112 5 112 6 1 1 107 212 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 107 212 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 123 c g - - MP 114 113 6 118 6 2 2 106 211 -11.237 -11.176 -0.129 -6.480 -5.816 -4.160 -2.368 -1.673 -2.263 0.445 -1.826 -2.130 2.714 -2.827 -2.331 1.652 -2.476 -1.163 0.687 -1.875 -0.625 -2.234 ML 115 113 6 118 6 1 1 105 211 -9.121 -9.467 -1.434 -0.698 -9.317 -6.846 0.556 -0.268 -0.765 0.151 MR 116 113 6 118 6 1 1 105 211 -8.561 -7.290 -1.235 -7.268 -0.896 -5.482 0.262 -0.371 0.057 -0.018 D 117 113 6 118 6 0 0 90 196 -13.246 -11.944 -7.741 -8.424 -8.441 -0.016 IL 118 118 5 118 6 1 1 105 211 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 105 210 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 23 122 g c - - MP 120 119 6 124 6 2 2 104 209 -11.201 -11.140 -0.432 -6.540 -6.452 -2.086 -2.383 -2.493 -2.801 0.961 -2.975 -2.668 2.131 -1.397 -2.283 2.390 -2.338 -1.178 0.409 -2.315 -0.615 -2.143 ML 121 119 6 124 6 1 1 105 210 -8.736 -9.082 -1.360 -0.754 -8.932 -6.462 0.307 -0.223 -0.644 0.341 MR 122 119 6 124 6 1 1 105 210 -8.519 -7.248 -2.119 -7.226 -0.452 -5.440 0.345 0.185 -0.870 0.064 D 123 119 6 124 6 0 0 90 195 -13.537 -12.235 -8.032 -8.714 -8.732 -0.013 IL 124 124 5 124 6 1 1 105 210 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 104 210 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 121 c g - - MP 126 125 6 130 4 2 2 103 209 -0.916 -4.116 -1.288 -8.405 -1.891 -2.566 -2.374 0.553 -1.673 -2.723 2.692 -3.078 -2.151 1.601 -2.849 -1.099 0.664 -2.720 0.010 -2.000 ML 127 125 6 130 4 1 1 104 209 -0.441 -5.754 -2.320 -4.483 0.683 -0.028 -0.937 -0.165 MR 128 125 6 130 4 1 1 104 209 -0.484 -5.598 -3.465 -2.526 0.555 -0.253 -0.357 -0.134 D 129 125 6 130 4 0 0 89 194 -9.774 -2.067 -0.432 -5.726 IL 130 130 5 130 4 1 1 105 210 -0.354 -2.232 -7.788 -11.525 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 1 97 203 -0.252 -2.648 -10.090 0.000 0.000 0.000 0.000 [ MATL 28 ] 49 - A - - - ML 132 131 6 134 3 1 1 15 33 -11.694 -0.002 -10.348 1.008 -0.551 -0.478 -0.766 D 133 131 6 134 3 0 0 16 35 -6.339 -1.377 -0.730 IL 134 134 3 134 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 50 - c - - - ML 135 134 3 137 3 1 1 13 32 -11.695 -0.002 -10.349 -0.059 0.316 -0.468 0.102 D 136 134 3 137 3 0 0 15 34 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 51 - c - - - ML 138 137 3 140 3 1 1 12 31 -11.695 -0.203 -2.934 -0.055 0.735 -0.915 -0.246 D 139 137 3 140 3 0 0 14 33 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 52 - c - - - ML 141 140 3 143 3 1 1 11 29 -11.494 -0.440 -1.930 -0.464 0.792 -0.203 -0.567 D 142 140 3 143 3 0 0 10 29 -10.258 -5.771 -0.028 IL 143 143 3 143 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 53 - c - - - ML 144 143 3 146 2 1 1 1 1 * 0.000 -0.822 0.954 0.057 -1.131 D 145 143 3 146 2 0 0 0 0 * 0.000 IL 146 146 3 146 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 33 ] - - - - - - E 147 146 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME L31-Actinobacteria ACC RF03158 DESC L31-Actinobacteria ribosomal protein leader LENG 48 MAXL 146 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 19:19:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/R-scape_updates/RF03158/CM NSEQ 971 EFFN 363.936096 CKSUM 485013958 STATS LOCAL MSV -7.9842 0.72115 STATS LOCAL VITERBI -8.2012 0.72115 STATS LOCAL FORWARD -3.2023 0.72115 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 2.01998 0.92509 1.14186 1.88636 1.38629 1.38629 1.38629 1.38629 0.00021 9.16858 9.16858 1.46634 0.26236 0.00000 * 1 2.43662 1.01195 1.97269 0.89171 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.00021 9.16858 9.16858 1.46634 0.26236 1.09861 0.40547 2 2.53891 0.24413 3.13935 2.36069 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 3 3.62598 4.27829 0.05297 4.50035 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 4 4.26078 4.27887 0.02889 7.59521 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04998 3.02318 9.18318 0.00422 5.47022 1.09861 0.40547 5 4.05555 0.96604 3.67271 0.55047 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.01397 9.18318 4.28500 1.46634 0.26236 1.09861 0.40547 6 1.90020 1.62935 3.92331 0.45472 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.16941 9.16941 1.46634 0.26236 0.01481 4.21984 7 7.71092 0.03236 4.74199 3.78666 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 8 7.75078 0.03729 7.72350 3.33166 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 9 6.96616 8.02536 0.02517 3.74704 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 10 6.97421 8.05055 0.00157 8.06247 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 11 9.52186 8.60616 10.55896 0.00028 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 12 9.52186 8.60616 10.55896 0.00028 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 13 7.47382 0.01406 4.37449 7.13007 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 14 0.04979 3.09750 6.44033 6.31325 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 15 8.05600 0.00091 7.89090 8.41988 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 16 3.22057 1.97786 0.19703 7.52868 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.00329 9.18318 5.75136 1.46634 0.26236 1.09861 0.40547 17 3.12928 0.70913 1.77978 1.21907 18 c - - < 1.38629 1.38629 1.38629 1.38629 0.01410 9.18010 4.27623 1.46634 0.26236 0.06265 2.80133 18 2.49698 0.37794 2.39478 1.95755 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.14979 9.16933 1.97324 1.46634 0.26236 0.66007 0.72736 19 2.23085 0.85195 1.12139 1.96501 20 c - - < 1.38629 1.38629 1.38629 1.38629 0.16732 9.02818 1.87114 1.46634 0.26236 0.83673 0.56762 20 2.39324 0.96141 1.07903 1.67993 21 c - - < 1.38629 1.38629 1.38629 1.38629 0.05897 8.94352 2.86231 1.46634 0.26236 1.92801 0.15716 21 2.09166 0.67336 1.42199 2.07708 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.08107 8.92567 2.55445 1.46634 0.26236 2.68148 0.07092 22 1.98175 1.07833 0.86504 2.29292 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.30339 8.86634 1.34114 1.46634 0.26236 2.16544 0.12183 23 2.18921 0.61933 1.44844 2.16496 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.98229 0.46941 8.61949 1.52524 0.24535 0.00048 7.64884 24 0.63976 1.77827 1.71772 2.08604 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 25 1.46710 1.11543 1.71117 1.34332 50 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 26 1.45112 0.81436 2.06116 1.63238 51 c - - _ 1.38629 1.38629 1.38629 1.38629 0.14496 9.18318 2.00367 1.46634 0.26236 1.09861 0.40547 27 1.80097 0.76563 1.49075 1.93369 52 c - - _ 1.38629 1.38629 1.38629 1.38629 0.17042 9.03845 1.85426 1.46634 0.26236 0.93964 0.49556 28 2.12741 0.63751 1.28455 2.58396 53 C - - _ 1.38629 1.38629 1.38629 1.38629 1.38127 0.60790 1.58842 1.90001 0.16201 1.44269 0.26957 29 2.18153 1.44010 0.55365 2.58517 121 G - - > 1.38629 1.38629 1.38629 1.38629 0.24033 8.78891 1.54422 1.46634 0.26236 0.69035 0.69596 30 2.66140 0.83162 1.07113 1.88267 122 c - - > 1.38629 1.38629 1.38629 1.38629 0.04892 8.81757 3.04513 1.46634 0.26236 1.72707 0.19578 31 2.26263 1.30942 0.60425 2.53250 123 G - - > 1.38629 1.38629 1.38629 1.38629 0.06700 8.84807 2.73854 1.46634 0.26236 1.42600 0.27479 32 1.68251 1.04070 1.09884 2.05862 124 c - - > 1.38629 1.38629 1.38629 1.38629 0.03771 8.87868 3.30052 1.46634 0.26236 0.38271 1.14575 33 2.20604 0.91926 1.06926 1.91198 125 c - - > 1.38629 1.38629 1.38629 1.38629 0.01651 9.06614 4.11936 1.46634 0.26236 0.06189 2.81311 34 2.66036 2.56265 0.28226 2.31365 126 G - - > 1.38629 1.38629 1.38629 1.38629 0.00268 9.16216 5.96241 1.46634 0.26236 0.00978 4.63188 35 1.78359 2.26154 0.41080 2.73867 127 G - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.18076 9.18076 1.46634 0.26236 0.07839 2.58499 36 4.80356 0.19891 2.03494 3.18242 128 C - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 37 7.12845 7.96380 0.00123 9.43883 129 G - - > 1.38629 1.38629 1.38629 1.38629 0.00367 9.18318 5.63826 1.46634 0.26236 1.09861 0.40547 38 0.00072 8.68479 8.15542 8.22564 130 A - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.17971 9.17971 1.46634 0.26236 0.05614 2.90790 39 8.09132 0.02347 8.37239 3.78736 131 C - - - 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 40 8.09168 0.00194 7.98835 6.64938 132 C - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 41 3.74775 0.02553 7.97460 6.64807 133 C - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 42 3.34538 7.89922 0.03678 7.60405 134 G - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.18318 9.18318 1.46634 0.26236 1.09861 0.40547 43 3.80954 7.91874 0.02328 7.62424 135 G - - > 1.38629 1.38629 1.38629 1.38629 0.05095 9.18318 3.00443 1.46634 0.26236 1.09861 0.40547 44 2.88954 0.15594 3.12309 3.10636 136 C - - - 1.38629 1.38629 1.38629 1.38629 0.38868 9.13245 1.13339 1.46634 0.26236 0.28147 1.40516 45 7.31081 8.51884 0.01815 4.06750 137 G - - - 1.38629 1.38629 1.38629 1.38629 0.02304 3.83294 6.78685 0.01386 4.28556 0.00065 7.34503 46 0.87983 3.63907 0.65066 3.29238 139 G - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.18251 9.18251 1.46634 0.26236 0.23664 1.55721 47 8.11598 0.02176 8.00377 3.86840 140 C - - > 1.38629 1.38629 1.38629 1.38629 0.00021 9.15812 9.15812 1.46634 0.26236 1.09861 0.40547 48 4.01135 0.05469 7.93309 3.35958 141 C - - > 1.38629 1.38629 1.38629 1.38629 0.00011 9.15802 * 1.46634 0.26236 0.00000 * //