INFERNAL1/a [1.1.5 | Sep 2023] NAME L31-Gammaproteobacteria ACC RF03157 DESC L31-Gammaproteobacteria ribosomal protein leader STATES 163 NODES 42 CLEN 53 W 125 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 14:20:37 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03157/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 733 EFFN 18.362469 CKSUM 292809120 NULL 0.000 0.000 0.000 0.000 GA 33.20 TC 33.20 NC 33.00 EFP7GF -22.8515 0.71915 ECMLC 0.54926 -11.11107 0.81271 1600000 838476 0.001431 ECMGC 0.43451 -19.01772 -5.62054 1600000 134950 0.002964 ECMLI 0.61727 -8.00868 2.23194 1600000 667516 0.001798 ECMGI 0.40719 -16.54326 -3.07204 1600000 96452 0.004147 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 125 208 -9.267 -10.512 -0.015 -6.966 IL 1 1 2 1 4 1 16 126 209 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 126 209 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 108 - U - - MR 3 2 3 5 3 1 16 125 208 -10.691 -0.004 -9.009 -3.518 -2.789 -3.655 1.883 D 4 2 3 5 3 0 13 123 206 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 16 125 208 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 107 - G - - MR 6 5 3 8 3 1 15 124 207 -10.691 -0.004 -9.009 -4.640 -4.161 1.956 -5.304 D 7 5 3 8 3 0 12 122 205 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 124 207 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 106 - G - - MR 9 8 3 11 3 1 14 123 206 -10.691 -0.004 -9.009 -5.104 -6.767 1.980 -5.846 D 10 8 3 11 3 0 11 121 204 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 123 206 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 105 - A - - MR 12 11 3 14 3 1 13 122 205 -10.691 -0.004 -9.009 1.966 -5.782 -4.229 -5.515 D 13 11 3 14 3 0 11 120 203 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 13 122 205 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 104 - G - - MR 15 14 3 17 3 1 12 121 204 -2.619 -1.120 -1.407 -2.177 -4.507 1.845 -2.821 D 16 14 3 17 3 0 10 120 202 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 16 122 204 -2.161 -0.389 -6.299 0.000 0.000 0.000 0.000 [ MATR 6 ] - 99 - U - - MR 18 17 3 20 3 1 15 120 203 -10.013 -0.006 -8.330 0.129 -0.957 -1.827 1.077 D 19 17 3 20 3 0 10 119 202 -10.459 -0.660 -1.449 IR 20 20 3 20 3 1 13 121 203 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 98 - u - - MR 21 20 3 23 3 1 14 119 202 -10.489 -0.004 -8.807 0.031 -0.458 -1.682 0.955 D 22 20 3 23 3 0 8 118 201 -9.090 -0.875 -1.143 IR 23 23 3 23 3 1 12 120 202 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 97 - a - - MR 24 23 3 26 3 1 13 118 201 -10.610 -0.004 -8.928 0.674 -0.317 -1.366 0.279 D 25 23 3 26 3 0 7 117 200 -8.109 -0.324 -2.339 IR 26 26 3 26 3 1 10 119 201 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 96 - a - - MR 27 26 3 29 3 1 12 117 200 -10.691 -0.004 -9.009 0.851 -0.744 -1.402 0.288 D 28 26 3 29 3 0 5 115 198 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 9 118 200 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 95 - A - - MR 30 29 3 32 3 1 12 116 199 -10.691 -0.004 -9.009 1.502 -1.158 -2.213 -0.989 D 31 29 3 32 3 0 4 114 197 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 8 117 199 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 94 - u - - MR 33 32 3 35 3 1 11 115 198 -10.691 -0.004 -9.009 0.287 -0.533 -1.198 0.725 D 34 32 3 35 3 0 4 113 196 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 8 116 198 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 93 - U - - MR 36 35 3 38 3 1 10 114 197 -10.691 -0.004 -9.009 -3.176 -1.543 -3.673 1.794 D 37 35 3 38 3 0 3 112 195 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 7 115 197 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 92 - C - - MR 39 38 3 41 3 1 10 113 196 -10.691 -0.004 -9.009 -2.836 1.627 -4.241 -0.479 D 40 38 3 41 3 0 3 111 194 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 6 114 196 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 91 - C - - MR 42 41 3 44 3 1 9 112 195 -10.691 -0.004 -9.009 -3.418 1.877 -4.930 -2.315 D 43 41 3 44 3 0 3 110 193 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 6 113 195 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 90 - G - - MR 45 44 3 47 5 1 9 111 194 -9.351 -0.008 -9.166 -9.379 -10.270 -1.937 -5.514 1.881 -4.901 D 46 44 3 47 5 0 2 109 192 -5.352 -0.707 -2.978 -4.409 -2.404 IR 47 47 3 47 5 1 5 111 194 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 1 89 C G - - MP 48 47 3 52 6 2 10 110 193 -10.583 -10.522 -0.008 -9.299 -9.579 -9.974 -7.402 -7.616 -6.705 -1.829 -1.386 -6.840 3.864 -6.056 -6.863 -3.736 -6.892 -5.878 -1.146 -7.269 -2.845 -5.659 ML 49 47 3 52 6 1 4 108 191 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 3 52 6 1 4 108 191 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 3 52 6 0 0 104 187 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 4 110 192 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 4 109 192 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 2 88 G C - - MP 54 53 6 58 6 2 9 108 191 -10.583 -10.522 -0.008 -9.299 -9.579 -9.974 -5.560 -4.057 -5.475 1.674 -6.669 -5.913 -1.736 -6.050 -5.556 3.494 -5.864 -1.039 -1.242 -5.313 -3.750 -4.388 ML 55 53 6 58 6 1 4 106 189 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 3 106 189 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 102 185 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 4 108 190 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 4 107 190 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 3 87 U A - - MP 60 59 6 64 6 2 8 106 189 -10.583 -10.522 -0.008 -9.299 -9.579 -9.974 -6.982 -7.105 -6.438 -3.204 -4.864 -6.677 2.093 -5.745 -6.499 -3.094 -6.686 -5.191 3.322 -6.894 0.420 -5.287 ML 61 59 6 64 6 1 3 105 187 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 3 104 187 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 101 184 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 4 106 188 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 4 105 188 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 4 86 G C - - MP 66 65 6 70 6 2 7 104 187 -10.583 -10.522 -0.008 -9.299 -9.579 -9.974 -4.922 -3.546 -4.756 1.719 -5.888 -5.344 -0.959 -5.422 -5.139 3.378 -5.399 -0.856 -0.695 -4.617 -2.058 -3.711 ML 67 65 6 70 6 1 3 103 186 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 2 102 185 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 100 183 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 4 104 186 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 4 104 186 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 5 85 U A - - MP 72 71 6 76 4 2 6 102 185 -9.451 -9.658 -0.009 -8.072 -6.985 -7.111 -2.479 -3.220 -4.867 -6.677 1.474 -5.748 -6.502 -3.114 -6.688 -5.208 3.618 -6.897 -1.374 -5.292 ML 73 71 6 76 4 1 2 102 184 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 101 184 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 100 182 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 3 102 185 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 3 102 185 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 6 - G - - - ML 78 77 6 80 3 1 5 100 183 -10.691 -0.004 -9.009 -5.104 -6.767 1.980 -5.846 D 79 77 6 80 3 0 0 99 182 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 2 101 183 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 84 - G - - MR 81 80 3 83 5 1 4 99 182 -9.351 -0.008 -9.166 -9.379 -10.270 -5.104 -6.767 1.980 -5.846 D 82 80 3 83 5 0 0 98 180 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 1 100 182 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 7 83 G C - - MP 84 83 3 88 6 2 4 98 181 -10.583 -10.522 -0.008 -9.299 -9.579 -9.974 -8.352 -5.150 -10.044 -2.557 -9.897 -6.358 -4.364 -9.737 -6.507 3.958 -6.716 -3.054 -4.730 -6.801 -6.756 -8.932 ML 85 83 3 88 6 1 1 97 180 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 1 97 179 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 0 94 177 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 98 180 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 98 180 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 8 82 U G - - MP 90 89 6 94 4 2 3 96 179 -9.451 -9.658 -0.009 -8.072 -7.278 -7.516 -6.606 -3.755 -4.967 -6.761 0.276 -5.877 -6.704 -3.740 -3.169 -5.846 -1.698 -7.127 3.816 -5.508 ML 91 89 6 94 4 1 1 96 178 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 1 95 178 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 0 94 176 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 1 96 179 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 1 96 179 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 9 - G - - - ML 96 95 6 98 3 1 1 94 177 -10.379 -0.492 -1.795 -1.402 -4.053 1.765 -2.619 D 97 95 6 98 3 0 0 93 176 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 95 178 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 10 - U - - - ML 99 98 3 101 3 1 1 94 176 -10.212 -0.005 -8.530 -2.691 -0.700 -2.562 1.614 D 100 98 3 101 3 0 0 93 175 -8.882 -0.061 -4.665 IL 101 101 3 101 3 1 1 94 177 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 81 - A - - MR 102 101 3 104 3 1 1 93 175 -10.691 -0.004 -9.009 1.705 -4.113 -0.789 -3.274 D 103 101 3 104 3 0 0 90 173 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 93 176 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 80 - U - - MR 105 104 3 107 3 1 1 92 174 -10.691 -0.004 -9.009 -2.117 -1.825 -0.173 1.378 D 106 104 3 107 3 0 0 90 172 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 92 175 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 79 - A - - MR 108 107 3 110 5 1 1 91 173 -8.406 -0.047 -9.166 -9.379 -5.270 1.745 -3.988 -1.117 -3.005 D 109 107 3 110 5 0 0 89 171 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 91 173 -2.436 -0.485 -5.947 -4.114 -5.220 0.000 0.000 0.000 0.000 [ MATP 30 ] 11 77 c g - - MP 111 110 3 115 6 2 2 90 173 -10.553 -10.493 -0.012 -9.269 -7.940 -9.944 -4.619 -4.443 -4.669 0.166 -3.742 -5.513 2.891 -4.353 -4.577 -0.137 -5.103 0.133 1.894 -4.842 -0.026 -1.400 ML 112 110 3 115 6 1 1 88 170 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 88 170 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 82 165 -10.018 -8.716 -4.513 -5.195 -5.213 -0.154 IL 115 115 5 115 6 1 1 89 172 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 89 172 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 12 76 c g - - MP 117 116 6 121 6 2 2 88 171 -10.549 -10.489 -0.008 -9.265 -9.545 -9.940 -3.634 -3.684 -3.773 0.664 -3.313 -4.623 2.794 -3.597 -3.773 0.132 -3.927 -1.125 1.440 -2.267 1.084 -1.777 ML 118 116 6 121 6 1 1 86 168 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 86 169 -7.107 -5.836 -1.405 -5.814 -0.948 -4.028 0.202 0.018 -0.462 0.152 D 120 116 6 121 6 0 0 81 164 -10.018 -8.716 -4.513 -5.195 -5.213 -0.154 IL 121 121 5 121 6 1 1 87 170 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 87 170 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 13 75 g c - - MP 123 122 6 127 6 2 2 86 169 -10.553 -10.493 -0.031 -9.269 -6.870 -6.711 -3.517 -3.226 -3.970 1.397 -4.425 -4.679 0.586 -4.474 -4.220 2.727 -1.720 1.029 -0.154 -3.952 0.273 -1.812 ML 124 122 6 127 6 1 1 84 166 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 84 167 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 80 163 -10.018 -8.716 -4.513 -5.195 -5.213 -0.154 IL 127 127 5 127 6 1 1 85 168 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 85 168 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 14 74 g c - - MP 129 128 6 133 6 2 2 84 167 -10.530 -10.470 -0.539 -9.246 -2.302 -3.236 -4.753 -3.413 -4.582 1.485 -5.647 -5.193 -0.457 -5.243 -4.997 2.709 -5.257 2.016 0.319 -4.450 -2.270 -3.542 ML 130 128 6 133 6 1 1 82 164 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 83 166 -7.283 -6.012 -1.618 -5.990 -0.780 -4.204 0.026 0.332 -0.667 0.129 D 132 128 6 133 6 0 0 80 163 -10.282 -8.980 -4.777 -5.459 -5.477 -0.127 IL 133 133 5 133 6 1 1 83 166 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 83 166 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 15 73 g c - - MP 135 134 6 139 6 2 2 82 165 -10.008 -4.436 -0.340 -8.723 -5.563 -2.844 -2.059 -2.296 -2.326 1.657 -1.938 -2.775 1.624 -2.074 -2.396 1.761 -2.962 -0.224 1.170 -2.182 0.144 -1.572 ML 136 134 6 139 6 1 1 79 162 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 82 165 -9.873 -1.701 -1.016 -8.580 -2.666 -4.761 0.950 -0.880 -0.759 -0.098 D 138 134 6 139 6 0 0 80 162 -11.881 -6.849 -0.592 -7.058 -7.076 -1.677 IL 139 139 5 139 6 1 1 81 164 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 81 164 -3.833 -0.166 -7.344 -5.512 -6.618 0.000 0.000 0.000 0.000 [ MATP 35 ] 16 71 C G - - MP 141 140 6 145 4 2 2 80 163 -2.342 -1.725 -1.013 -7.738 -6.122 -6.057 -5.786 -2.028 -4.351 -6.200 3.561 -5.166 -5.778 -0.361 -6.076 -3.875 0.514 -6.145 0.534 -4.545 ML 142 140 6 145 4 1 1 75 157 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 84 166 -0.848 -4.956 -2.823 -1.884 -0.543 -1.563 1.298 -0.955 D 144 140 6 145 4 0 0 79 162 -2.080 -1.607 -1.596 -3.261 IL 145 145 5 145 4 1 1 85 168 -0.322 -2.434 -6.174 -9.911 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 65 134 -0.387 -2.097 -9.086 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - u - - - ML 147 146 6 149 3 1 1 16 34 -10.379 -0.004 -9.033 -0.141 -1.429 0.264 0.605 D 148 146 6 149 3 0 0 16 35 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - u - - - ML 150 149 3 152 3 1 1 14 33 -10.379 -0.004 -9.033 0.226 -0.799 -0.702 0.714 D 151 149 3 152 3 0 0 15 34 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - a - - - ML 153 152 3 155 3 1 1 13 32 -10.379 -0.275 -2.531 0.482 -0.309 -0.766 0.273 D 154 152 3 155 3 0 0 14 33 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - A - - - ML 156 155 3 158 3 1 1 12 30 -10.109 -0.362 -2.179 1.101 -1.739 -0.114 -0.664 D 157 155 3 158 3 0 0 11 29 -9.413 -4.926 -0.050 IL 158 158 3 158 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - G - - - ML 159 158 3 161 2 1 1 1 1 * 0.000 -0.214 -0.967 1.024 -0.756 D 160 158 3 161 2 0 0 0 0 * 0.000 IL 161 161 3 161 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 162 161 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME L31-Gammaproteobacteria ACC RF03157 DESC L31-Gammaproteobacteria ribosomal protein leader LENG 53 MAXL 127 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jul 12 14:20:37 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03157/CM NSEQ 733 EFFN 132.675613 CKSUM 292809120 STATS LOCAL MSV -7.3215 0.71915 STATS LOCAL VITERBI -8.2792 0.71915 STATS LOCAL FORWARD -3.8417 0.71915 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.58378 1.57853 1.05915 1.41975 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 0.00000 * 1 4.03678 0.03770 6.82197 4.00348 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 2 1.53903 6.66217 0.26366 4.14169 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 3 6.84371 1.38043 6.78262 0.29259 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 4 1.51980 5.31297 0.29760 3.38974 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 5 4.37300 1.90113 6.76782 0.17813 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 6 6.70796 7.93731 0.00230 7.23568 6 G - - - 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 7 6.05023 7.17214 0.00386 7.22410 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 8 6.86344 3.07789 4.82436 0.05671 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 9 2.43946 6.20649 0.12656 3.51811 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.37566 7.73337 1.16242 1.46634 0.26236 1.09861 0.40547 10 5.11816 1.82312 3.44475 0.22242 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.00127 7.35898 7.35898 1.46634 0.26236 0.09707 2.38049 11 3.07653 0.62516 2.29971 1.14439 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.00473 7.70484 5.45676 1.46634 0.26236 4.20825 0.01498 12 2.52429 0.64235 2.97266 1.07101 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.00091 7.70101 7.70101 1.46634 0.26236 2.07881 0.13362 13 1.81505 2.53316 0.49019 1.92926 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.02314 7.70484 3.79780 1.46634 0.26236 4.20825 0.01498 14 1.75546 3.85360 0.32965 2.44424 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.56417 7.68262 0.84233 1.46634 0.26236 2.61981 0.07560 15 1.34692 1.49699 1.11001 1.67879 15 g - - < 1.38629 1.38629 1.38629 1.38629 0.17910 7.12607 1.81295 1.46634 0.26236 0.09838 2.36775 16 6.34446 0.21647 3.24346 1.87172 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.35495 1.20971 7.59370 1.62008 0.22050 0.00667 5.01276 17 1.61051 2.85612 1.09489 0.89613 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 18 1.24360 2.08510 1.95311 0.80849 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 19 1.00689 1.58873 2.02238 1.21025 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.20767 7.73337 1.67618 1.46634 0.26236 1.09861 0.40547 20 0.52102 3.23601 1.39941 2.12005 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10659 7.52678 2.29690 1.46634 0.26236 1.99738 0.14582 21 1.62647 2.12643 0.54888 2.23943 40 G - - _ 1.38629 1.38629 1.38629 1.38629 1.64374 0.32441 2.47940 1.46526 0.26269 0.00359 5.63069 22 2.79554 3.29984 0.10566 6.07477 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.41486 1.90470 1.65705 0.00627 5.07547 0.01371 4.29623 23 1.30055 1.48016 1.51521 1.27207 73 u - - > 1.38629 1.38629 1.38629 1.38629 0.00107 7.53706 7.53706 1.46634 0.26236 0.25616 1.48728 24 2.53906 0.96172 3.54525 0.67342 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.00091 7.69286 7.69286 1.46634 0.26236 1.22854 0.34633 25 3.40660 0.84810 1.59383 1.09222 75 c - - > 1.38629 1.38629 1.38629 1.38629 0.00090 7.70484 7.70484 1.46634 0.26236 4.20825 0.01498 26 1.90322 3.10626 0.37187 2.14813 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.00090 7.70484 7.70484 1.46634 0.26236 4.20825 0.01498 27 1.44493 4.01320 0.52524 1.86593 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.00254 6.17389 7.70484 0.38774 1.13503 0.03020 3.51510 28 0.14578 6.16414 2.17466 3.91673 79 A - - - 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 29 3.94267 3.02248 1.35677 0.39388 80 U - - - 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 30 0.17524 6.29604 1.93433 4.24184 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 31 5.65998 6.93634 0.00578 6.64073 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 32 7.30492 0.00482 7.12344 5.70525 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 33 6.70796 7.93731 0.00230 7.23568 84 G - - - 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 34 0.19736 6.89995 1.73305 6.60539 85 A - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 35 3.81703 0.31592 4.11348 1.45871 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 36 0.40798 6.91970 1.10053 6.62604 87 A - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 37 4.15809 0.28497 6.49466 1.46614 88 C - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 38 3.10164 6.96828 0.06596 4.02212 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 39 2.67589 7.74151 0.07267 7.10975 90 G - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 40 4.08859 0.06300 6.55498 3.14955 91 C - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 41 4.16423 0.21412 6.15744 1.74244 92 C - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 42 4.68090 2.49979 4.67162 0.10617 93 U - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 43 1.17942 1.81412 2.50799 0.80267 94 u - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 44 0.28299 2.25769 3.38436 2.22583 95 A - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 45 0.70110 2.01119 2.76579 1.18024 96 a - - : 1.38629 1.38629 1.38629 1.38629 0.06301 7.73338 2.80303 1.46634 0.26236 1.09861 0.40547 46 0.83709 1.60291 2.74975 1.19806 97 a - - : 1.38629 1.38629 1.38629 1.38629 0.09491 7.67130 2.40702 1.46634 0.26236 4.94469 0.00715 47 1.38986 1.75663 3.17201 0.62298 98 U - - : 1.38629 1.38629 1.38629 1.38629 0.38089 7.57741 1.15127 1.46634 0.26236 5.80734 0.00301 48 1.26173 2.34757 3.73077 0.51540 99 U - - : 1.38629 1.38629 1.38629 1.38629 0.36776 1.18102 7.19802 0.24176 1.53825 0.00211 6.16281 49 3.09821 6.65863 0.07807 3.55115 104 G - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 50 0.01148 7.56678 4.59085 7.19772 105 A - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 51 6.70796 7.93731 0.00230 7.23568 106 G - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 52 6.69827 4.27153 0.01607 7.20146 107 G - - : 1.38629 1.38629 1.38629 1.38629 0.00088 7.73338 7.73338 1.46634 0.26236 1.09861 0.40547 53 5.54662 3.91981 4.52064 0.03524 108 U - - : 1.38629 1.38629 1.38629 1.38629 0.00044 7.73294 * 1.46634 0.26236 0.00000 * //