INFERNAL1/a [1.1.5 | Sep 2023] NAME RAGATH-10 ACC RF03147 DESC RAGATH-10 RNA STATES 260 NODES 67 CLEN 82 W 120 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 05:37:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03147/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 149 EFFN 2.459991 CKSUM 4113337547 NULL 0.000 0.000 0.000 0.000 GA 41.20 TC 46.00 NC 40.60 EFP7GF -10.0124 0.71884 ECMLC 0.65276 -6.49700 2.07149 1600000 322301 0.003723 ECMGC 0.42337 -13.86981 -3.22947 1600000 36181 0.011056 ECMLI 0.55807 -6.36349 3.25777 1600000 257668 0.004657 ECMGI 0.46076 -8.39654 1.28148 1600000 34570 0.011571 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 120 161 -7.150 -7.357 -0.050 -5.586 IL 1 1 2 1 4 8 37 122 163 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 8 36 122 163 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 9 36 120 161 -8.150 -0.018 -6.804 0.255 -1.737 1.040 -1.153 D 4 2 3 5 3 5 31 118 159 -6.209 -1.612 -0.601 IL 5 5 3 5 3 8 35 121 162 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 8 35 119 160 -8.153 -0.018 -6.807 1.379 -1.518 -1.041 -0.828 D 7 5 3 8 3 4 30 117 158 -6.174 -1.687 -0.566 IL 8 8 3 8 3 7 35 120 161 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 8 34 118 159 -8.153 -0.018 -6.807 1.196 -1.130 -0.544 -0.821 D 10 8 3 11 3 4 30 116 157 -6.174 -1.687 -0.566 IL 11 11 3 11 3 7 34 119 160 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 7 34 117 158 -8.532 -0.021 -6.405 1.568 -2.027 -1.144 -1.567 D 13 11 3 14 3 4 29 116 156 -5.620 -0.734 -1.403 IL 14 14 3 14 3 6 33 118 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 112 - u - - MR 15 14 3 17 3 7 33 116 157 -8.528 -0.017 -6.845 0.113 -0.796 -0.074 0.477 D 16 14 3 17 3 3 27 114 155 -6.432 -1.489 -0.662 IR 17 17 3 17 3 6 32 117 157 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 111 - G - - MR 18 17 3 20 3 7 32 115 156 -8.532 -0.016 -6.850 -1.466 -2.808 1.710 -2.164 D 19 17 3 20 3 3 26 113 154 -6.390 -1.568 -0.620 IR 20 20 3 20 3 5 31 116 156 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 110 - A - - MR 21 20 3 23 3 6 32 114 155 -8.532 -0.016 -6.850 1.580 -2.053 -1.193 -1.596 D 22 20 3 23 3 2 25 112 153 -6.390 -1.568 -0.620 IR 23 23 3 23 3 5 30 115 155 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 109 - a - - MR 24 23 3 26 3 6 31 113 154 -8.532 -0.016 -6.850 0.669 -1.449 0.558 -0.807 D 25 23 3 26 3 2 25 111 152 -6.390 -1.568 -0.620 IR 26 26 3 26 3 5 29 114 154 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 108 - A - - MR 27 26 3 29 3 6 31 112 153 -8.532 -0.016 -6.850 1.689 -2.338 -1.686 -1.910 D 28 26 3 29 3 2 24 110 151 -6.390 -1.568 -0.620 IR 29 29 3 29 3 4 29 113 153 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 107 - G - - MR 30 29 3 32 3 5 30 111 152 -8.532 -0.016 -6.850 -1.980 -3.257 1.800 -2.645 D 31 29 3 32 3 2 23 109 150 -6.390 -1.568 -0.620 IR 32 32 3 32 3 4 28 112 152 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 106 - A - - MR 33 32 3 35 5 5 30 110 151 -7.260 -0.035 -7.075 -7.287 -8.179 1.790 -2.755 -2.349 -2.336 D 34 32 3 35 5 2 22 109 149 -5.352 -0.707 -2.978 -4.409 -2.404 IR 35 35 3 35 5 4 26 110 151 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 5 105 C G - - MP 36 35 3 40 6 6 31 109 150 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -4.825 -4.824 -4.533 -1.031 -2.428 -4.944 3.638 -4.089 -4.598 -0.844 -4.847 -2.835 0.282 -4.899 -0.851 -3.439 ML 37 35 3 40 6 3 24 107 148 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 3 24 107 148 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 1 20 104 144 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 3 26 109 149 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 3 26 108 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 104 C G - - MP 42 41 6 46 6 6 30 107 148 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -4.754 -4.751 -4.451 -0.951 -2.605 -4.855 3.609 -3.984 -4.510 -0.757 -4.764 -2.760 0.385 -4.816 -0.643 -3.346 ML 43 41 6 46 6 3 24 105 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 3 24 105 146 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 1 19 102 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 3 25 107 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 3 26 106 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 103 U A - - MP 48 47 6 52 6 6 29 105 146 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -4.103 -4.051 -3.913 -0.306 -2.763 -4.424 1.758 -3.507 -3.935 -0.076 -4.289 -2.042 3.175 -4.212 -0.322 -2.780 ML 49 47 6 52 6 3 24 103 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 3 23 103 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 1 19 100 140 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 3 25 105 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 3 25 104 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 102 C G - - MP 54 53 6 58 6 5 28 103 144 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -4.701 -4.699 -4.434 -0.911 -2.307 -4.866 3.602 -3.999 -4.490 -0.724 -4.759 -2.709 0.378 -4.785 -0.669 -3.335 ML 55 53 6 58 6 3 23 101 142 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 3 23 101 142 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 1 19 98 138 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 3 24 103 143 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 3 25 102 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 9 101 a u - - MP 60 59 6 64 6 5 27 101 142 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -3.364 -1.765 -3.439 2.857 -3.944 -4.545 0.221 -3.705 -3.424 1.876 -3.944 0.599 -0.020 -3.718 -1.637 -2.362 ML 61 59 6 64 6 3 23 99 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 3 22 99 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 1 19 96 137 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 3 24 101 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 3 24 100 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 10 100 u a - - MP 66 65 6 70 6 5 25 99 140 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -3.498 -3.496 -3.455 0.156 -2.344 -4.097 1.918 -3.210 -3.466 0.335 -3.901 -1.565 2.606 -3.686 1.241 -2.383 ML 67 65 6 70 6 3 22 98 138 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 3 21 97 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 1 18 94 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 3 23 99 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 3 23 98 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 11 99 C G - - MP 72 71 6 76 6 4 23 97 138 -9.188 -9.127 -0.030 -7.904 -8.184 -6.686 -4.790 -4.789 -4.510 -1.000 -2.343 -4.930 3.630 -4.074 -4.572 -0.814 -4.829 -2.801 0.300 -4.870 -0.819 -3.416 ML 73 71 6 76 6 3 21 96 136 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 3 20 95 136 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 1 18 93 134 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 3 22 97 137 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 3 22 96 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 12 98 u g - - MP 78 77 6 82 4 4 21 95 136 -7.126 -4.253 -0.118 -5.747 -3.869 -3.881 -3.698 -0.232 -2.592 -4.207 1.733 -3.332 -3.734 -0.040 -4.089 -1.979 1.919 -3.992 2.567 -2.627 ML 79 77 6 82 4 2 20 94 135 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 4 2 19 94 134 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 81 77 6 82 4 1 18 93 133 -4.730 -4.412 -1.776 -0.682 IL 82 82 5 82 4 3 20 95 136 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 83 83 6 83 3 3 20 95 135 -1.596 -0.694 -4.296 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - U - - - ML 84 83 6 86 3 2 19 93 134 -2.646 -0.266 -6.807 -1.128 -0.554 -1.876 1.372 D 85 83 6 86 3 0 17 91 132 -6.174 -1.687 -0.566 IL 86 86 3 86 3 2 19 93 134 -1.941 -0.516 -4.641 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - G - - - ML 87 86 3 89 2 1 18 92 132 -2.695 -0.242 -1.757 -3.106 1.770 -2.503 D 88 86 3 89 2 0 17 91 131 -8.445 -0.004 IL 89 89 3 89 2 1 18 92 133 -2.499 -0.281 0.000 0.000 0.000 0.000 [ BIF 22 ] - - - - - - B 90 89 3 91 165 0 17 91 131 [ BEGL 23 ] - - - - - - S 91 90 1 92 4 0 0 39 58 -0.061 -6.939 -5.952 -5.854 [ MATP 24 ] 17 49 c g - - MP 92 91 1 96 6 2 2 39 58 -9.173 -9.113 -0.024 -7.889 -7.293 -8.564 -2.841 -2.598 -2.936 1.216 -2.578 -3.736 2.169 -3.016 -2.973 1.735 -3.481 -0.079 1.286 -3.046 0.087 -1.922 ML 93 91 1 96 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 1 96 6 1 1 38 57 -7.039 -5.768 -1.677 -5.746 -0.790 -3.960 0.375 -0.519 0.070 -0.066 D 95 91 1 96 6 0 0 36 54 -9.225 -7.923 -3.720 -4.402 -4.419 -0.279 IL 96 96 5 96 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 48 u a - - MP 98 97 6 102 6 2 2 37 56 -9.169 -6.658 -0.035 -7.885 -7.502 -8.560 -1.796 -2.638 -2.778 0.793 -2.382 -3.597 1.695 -2.859 -2.805 1.237 -3.338 -0.808 2.439 -2.924 0.021 -1.820 ML 99 97 6 102 6 1 1 37 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 6 1 1 36 55 -7.087 -5.816 -1.438 -5.794 -0.928 -4.008 0.614 -0.554 -0.255 -0.074 D 101 97 6 102 6 0 0 34 53 -9.225 -7.923 -3.720 -4.402 -4.419 -0.279 IL 102 102 5 102 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 37 56 -2.479 -0.468 -5.990 -4.158 -5.264 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 46 c g - - MP 104 103 6 108 4 2 2 35 54 -7.118 -4.523 -0.288 -2.940 -2.026 -2.146 -2.201 0.961 -1.795 -3.034 2.358 -2.438 -2.245 1.057 -1.701 -0.614 1.377 -1.553 0.094 -1.379 ML 105 103 6 108 4 1 1 36 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 4 1 1 35 54 -4.850 -3.389 -1.746 -0.807 0.311 -0.371 -0.256 0.200 D 107 103 6 108 4 0 0 34 53 -4.733 -4.414 -2.430 -0.454 IL 108 108 5 108 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 109 109 6 109 3 1 1 36 55 -1.467 -1.000 -2.855 0.000 0.000 0.000 0.000 [ MATL 27 ] 20 - a - - - ML 110 109 6 112 3 1 1 32 51 -7.906 -0.173 -3.198 0.468 -0.855 -0.043 0.130 D 111 109 6 112 3 0 0 31 49 -7.584 -2.891 -0.218 IL 112 112 3 112 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 21 - c - - - ML 113 112 3 115 3 1 1 31 50 -8.170 -0.021 -6.488 -0.069 0.478 -1.004 0.207 D 114 112 3 115 3 0 0 30 48 -6.948 -0.841 -1.205 IL 115 115 3 115 3 1 1 32 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 40 - u - - MR 116 115 3 118 5 1 1 30 49 -1.946 -0.498 -6.926 -5.614 -8.030 0.299 -0.072 -0.885 0.353 D 117 115 3 118 5 0 0 28 47 -5.986 -0.414 -3.612 -5.043 -3.037 IR 118 118 3 118 5 1 1 30 48 -2.178 -0.690 -6.891 -2.871 -6.165 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 37 g c - - MP 119 118 3 123 6 2 2 29 47 -9.130 -9.070 -0.021 -7.846 -8.126 -8.521 -2.254 -1.450 -2.250 1.475 -2.508 -2.585 1.091 -2.764 -2.504 2.334 -3.006 0.017 0.981 -2.446 -0.532 -0.708 ML 120 118 3 123 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 3 123 6 1 1 27 46 -7.552 -6.281 -0.881 -6.259 -1.393 -4.473 0.374 -0.514 -0.625 0.438 D 122 118 3 123 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 36 c g - - MP 125 124 6 129 6 2 2 27 45 -9.188 -9.127 -0.022 -7.558 -8.184 -8.579 -2.462 -1.695 -2.606 0.926 -2.135 -3.433 2.450 -2.089 -2.623 0.978 -3.166 -0.761 1.461 -2.753 0.463 -1.675 ML 126 124 6 129 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 1 25 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 35 g c - - MP 131 130 6 135 6 2 2 25 43 -9.186 -9.126 -0.020 -7.902 -8.182 -8.577 -3.467 -2.463 -3.419 1.318 -3.826 -4.089 0.846 -3.832 -3.630 2.941 -4.004 0.250 0.525 -3.380 -1.301 -2.386 ML 132 130 6 135 6 1 1 23 42 -6.273 -6.619 -1.277 -1.028 -6.469 -3.998 0.399 -0.470 -0.040 -0.018 MR 133 130 6 135 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 34 c g - - MP 137 136 6 141 6 2 2 23 41 -9.188 -9.127 -0.070 -7.904 -8.184 -4.777 -3.093 -3.029 -3.161 0.776 -2.480 -3.939 2.683 -2.034 -3.149 0.928 -3.655 -1.046 1.663 -3.331 -0.085 -2.086 ML 138 136 6 141 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 141 141 5 141 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 26 33 C G - - MP 143 142 6 147 4 2 2 21 39 -7.028 -4.194 -0.124 -5.649 -3.767 -3.743 -2.748 -0.106 -2.446 -4.408 3.348 -3.571 -3.771 0.105 -4.195 -1.802 0.882 -3.972 -0.463 -2.698 ML 144 142 6 147 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 145 142 6 147 4 1 1 20 38 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 146 142 6 147 4 0 0 19 37 -5.216 -4.897 -1.434 -0.812 IL 147 147 5 147 4 1 1 22 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 1 21 39 -1.592 -0.696 -4.292 0.000 0.000 0.000 0.000 [ MATL 35 ] 27 - A - - - ML 149 148 6 151 3 1 1 17 36 -8.115 -0.019 -6.769 1.476 -1.228 -1.544 -1.159 D 150 148 6 151 3 0 0 17 35 -6.527 -1.120 -0.919 IL 151 151 3 151 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - U - - - ML 152 151 3 154 3 1 1 16 35 -8.153 -0.018 -6.807 -0.543 -0.997 -1.278 1.263 D 153 151 3 154 3 0 0 16 34 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - C - - - ML 155 154 3 157 3 1 1 15 33 -8.153 -0.018 -6.807 -0.610 1.013 -0.939 -0.313 D 156 154 3 157 3 0 0 15 33 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - c - - - ML 158 157 3 160 3 1 1 13 31 -8.153 -0.018 -6.807 -0.174 0.956 -1.272 -0.396 D 159 157 3 160 3 0 0 13 32 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - G - - - ML 161 160 3 163 2 1 1 1 1 * 0.000 -0.299 -1.932 1.333 -1.302 D 162 160 3 163 2 0 0 0 0 * 0.000 IL 163 163 3 163 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 164 163 3 -1 0 0 0 0 0 [ BEGR 41 ] - - - - - - S 165 90 1 166 3 0 4 67 107 -8.153 -0.018 -6.807 IL 166 166 2 166 3 1 5 68 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 50 - C - - - ML 167 166 2 169 3 1 4 67 107 -8.153 -0.018 -6.807 -0.769 1.144 -1.424 -0.267 D 168 166 2 169 3 0 2 65 106 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 4 67 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 51 - A - - - ML 170 169 3 172 2 1 3 66 106 -8.581 -0.004 1.394 -1.573 -0.969 -0.932 D 171 169 3 172 2 0 2 65 105 -8.445 -0.004 IL 172 172 3 172 2 1 3 66 107 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 44 ] - - - - - - B 173 172 3 174 218 0 2 65 105 [ BEGL 45 ] - - - - - - S 174 173 1 175 4 0 0 51 92 -0.041 -6.939 -6.347 -6.987 [ MATP 46 ] 52 80 G C - - MP 175 174 1 179 6 2 2 51 92 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -3.546 -2.546 -3.495 1.052 -3.779 -4.132 0.980 -3.858 -3.682 3.003 -4.054 -0.021 0.654 -3.449 -1.254 -2.449 ML 176 174 1 179 6 1 1 49 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 177 174 1 179 6 1 1 49 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 178 174 1 179 6 0 0 46 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 179 179 5 179 6 1 1 51 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 180 180 6 180 5 1 1 50 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 53 79 U A - - MP 181 180 6 185 6 2 2 49 90 -9.188 -9.127 -0.032 -7.904 -8.184 -6.507 -3.769 -3.752 -3.675 -0.047 -2.104 -4.268 1.858 -3.360 -3.687 0.153 -4.093 -1.784 3.016 -3.927 -0.094 -2.568 ML 182 180 6 185 6 1 1 47 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 183 180 6 185 6 1 1 47 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 184 180 6 185 6 0 0 44 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 185 185 5 185 6 1 1 49 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 186 186 6 186 5 1 1 48 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 54 78 g c - - MP 187 186 6 191 6 2 2 47 88 -9.176 -5.163 -0.127 -7.892 -8.172 -4.422 -3.294 -2.162 -3.267 1.266 -3.623 -3.925 1.053 -3.695 -3.487 2.932 -3.871 -0.150 0.453 -2.626 -1.183 -2.277 ML 188 186 6 191 6 1 1 45 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 189 186 6 191 6 1 1 45 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 190 186 6 191 6 0 0 41 82 -9.251 -7.949 -3.746 -4.428 -4.446 -0.273 IL 191 191 5 191 6 1 1 47 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 192 192 6 192 5 1 1 46 87 -2.584 -0.424 -6.146 -4.314 -5.419 0.000 0.000 0.000 0.000 [ MATP 49 ] 55 75 u a - - MP 193 192 6 197 6 2 2 45 86 -9.111 -9.050 -0.079 -7.827 -7.597 -4.637 -3.188 -3.122 -3.206 0.529 -2.436 -3.924 2.148 -3.044 -3.210 0.938 -3.683 -1.143 2.322 -3.397 0.626 -2.132 ML 194 192 6 197 6 1 1 43 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 195 192 6 197 6 1 1 43 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 196 192 6 197 6 0 0 40 80 -9.999 -8.697 -4.494 -5.176 -5.194 -0.156 IL 197 197 5 197 6 1 1 45 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 198 198 6 198 5 1 1 45 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 56 74 u a - - MP 199 198 6 203 4 2 2 43 84 -1.562 -4.540 -0.799 -4.523 -3.350 -3.301 -3.298 0.337 -2.405 -3.931 1.981 -3.066 -3.319 0.605 -3.745 -1.350 2.591 -3.525 0.767 -2.229 ML 200 198 6 203 4 1 1 39 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 201 198 6 203 4 1 1 37 78 -4.839 -3.868 -1.642 -0.796 0.462 -0.451 -0.188 0.018 D 202 198 6 203 4 0 0 39 79 -3.249 -1.422 -2.194 -1.722 IL 203 203 5 203 4 1 1 44 84 -0.657 -1.829 -3.674 -7.411 0.000 0.000 0.000 0.000 IR 204 204 6 204 3 1 1 34 69 -0.775 -1.424 -4.550 0.000 0.000 0.000 0.000 [ MATL 51 ] 62 - u - - - ML 205 204 6 207 3 1 1 16 35 -8.053 -0.048 -5.102 -0.296 -0.396 -0.767 0.878 D 206 204 6 207 3 0 0 15 34 -6.948 -1.605 -0.592 IL 207 207 3 207 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 63 - u - - - ML 208 207 3 210 3 1 1 15 33 -8.061 -0.019 -6.715 -0.107 -0.472 -0.948 0.874 D 209 207 3 210 3 0 0 14 33 -6.897 -0.986 -1.039 IL 210 210 3 210 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 64 - a - - - ML 211 210 3 213 3 1 1 13 31 -8.136 -0.018 -6.790 0.463 -0.473 -0.392 0.187 D 212 210 3 213 3 0 0 13 32 -6.347 -1.624 -0.592 IL 213 213 3 213 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 65 - u - - - ML 214 213 3 216 2 1 1 1 1 * 0.000 0.316 -0.397 -0.515 0.374 D 215 213 3 216 2 0 0 0 0 * 0.000 IL 216 216 3 216 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 217 216 3 -1 0 0 0 0 0 [ BEGR 56 ] - - - - - - S 218 173 1 219 5 0 0 28 46 -7.260 -0.035 -7.075 -7.287 -8.179 IL 219 219 2 219 5 1 1 29 47 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 81 96 g c - - MP 220 219 2 224 6 2 2 28 46 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -3.198 -2.426 -3.195 1.634 -3.380 -3.925 1.154 -3.534 -3.378 2.617 -3.797 0.123 0.844 -3.204 -0.984 -2.189 ML 221 219 2 224 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 222 219 2 224 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 223 219 2 224 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 224 224 5 224 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 225 225 6 225 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 82 95 G C - - MP 226 225 6 230 6 2 2 26 44 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -3.867 -2.510 -3.863 1.704 -4.519 -4.503 0.042 -4.248 -3.873 3.166 -4.273 -0.249 -0.242 -3.854 -1.935 -2.773 ML 227 225 6 230 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 228 225 6 230 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 229 225 6 230 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 230 230 5 230 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 231 231 6 231 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 83 94 G C - - MP 232 231 6 236 6 2 2 24 42 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -3.983 -2.119 -3.968 1.315 -4.667 -4.462 -0.071 -4.403 -3.974 3.312 -4.341 -0.329 -0.350 -3.870 -2.050 -2.899 ML 233 231 6 236 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 234 231 6 236 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 235 231 6 236 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 236 236 5 236 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 237 237 6 237 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 84 93 C G - - MP 238 237 6 242 4 2 2 22 40 -4.489 -7.357 -0.109 -5.498 -4.818 -4.785 -3.772 -1.052 -2.984 -5.168 3.684 -4.376 -4.722 -0.843 -5.008 -2.791 0.023 -4.969 -1.267 -3.600 ML 239 237 6 242 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 240 237 6 242 4 1 1 21 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 241 237 6 242 4 0 0 20 38 -4.568 -4.250 -2.265 -0.520 IL 242 242 5 242 4 1 1 23 41 -1.935 -1.636 -1.367 -5.104 0.000 0.000 0.000 0.000 IR 243 243 6 243 3 1 1 21 39 -1.570 -0.710 -4.270 0.000 0.000 0.000 0.000 [ MATL 61 ] 86 - A - - - ML 244 243 6 246 3 1 1 18 36 -2.490 -0.596 -2.641 1.116 -1.504 -0.076 -0.913 D 245 243 6 246 3 0 0 16 34 -6.228 -1.575 -0.619 IL 246 246 3 246 3 1 1 18 36 -1.988 -0.496 -4.688 0.000 0.000 0.000 0.000 [ MATL 62 ] 88 - u - - - ML 247 246 3 249 3 1 1 16 35 -7.917 -0.021 -6.571 -0.578 0.503 -1.379 0.612 D 248 246 3 249 3 0 0 15 34 -7.547 -0.467 -1.884 IL 249 249 3 249 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 89 - U - - - ML 250 249 3 252 3 1 1 15 33 -8.150 -0.018 -6.804 -0.406 -0.531 -1.178 1.078 D 251 249 3 252 3 0 0 15 33 -6.212 -1.607 -0.603 IL 252 252 3 252 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 90 - C - - - ML 253 252 3 255 3 1 1 13 31 -8.153 -0.018 -6.807 -1.095 1.135 -1.931 0.101 D 254 252 3 255 3 0 0 13 32 -6.174 -1.687 -0.566 IL 255 255 3 255 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 91 - C - - - ML 256 255 3 258 2 1 1 1 1 * 0.000 -1.091 1.397 -1.790 -0.720 D 257 255 3 258 2 0 0 0 0 * 0.000 IL 258 258 3 258 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 259 258 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME RAGATH-10 ACC RF03147 DESC RAGATH-10 RNA LENG 82 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 05:37:07 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03147/CM NSEQ 149 EFFN 5.160980 CKSUM 4113337547 STATS LOCAL MSV -8.0908 0.71884 STATS LOCAL VITERBI -9.9858 0.71884 STATS LOCAL FORWARD -3.0476 0.71884 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42232 1.37092 1.23688 1.53859 1.38629 1.38629 1.38629 1.38629 0.02727 4.43055 4.20007 1.46634 0.26236 0.00000 * 1 1.22055 3.15090 0.50955 2.79112 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.02418 4.42745 4.42745 1.46634 0.26236 0.95100 0.48834 2 0.29932 2.84925 2.33585 2.26274 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 3 0.41797 2.38842 1.83591 2.40379 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 4 0.18089 3.42507 2.38198 3.20504 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 5 4.31765 0.07943 4.18343 3.04111 5 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 6 4.14522 0.10023 4.00208 2.79276 6 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 7 3.51970 1.77737 3.33780 0.26684 7 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 8 4.12716 0.09945 3.98396 2.81467 8 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 9 0.45460 3.29019 1.26840 3.06249 9 A - - ( 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 10 3.03134 1.60301 2.83088 0.36889 10 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 11 4.25068 0.08401 4.12477 2.99266 11 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04345 4.43055 3.48649 1.46634 0.26236 1.09861 0.40547 12 3.53508 1.92840 3.38124 0.23388 12 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02457 4.41167 4.41167 1.46634 0.26236 0.57554 0.82645 13 2.77643 1.90395 3.30505 0.28494 13 U - - , 1.38629 1.38629 1.38629 1.38629 0.25716 1.53783 4.43055 0.10739 2.28453 1.09861 0.40547 14 3.33102 4.44887 0.06777 4.01319 15 G - - , 1.38629 1.38629 1.38629 1.38629 0.20014 1.82827 3.87809 0.14214 2.02118 1.09861 0.40547 15 1.78998 1.08749 1.30585 1.49152 17 c - - < 1.38629 1.38629 1.38629 1.38629 0.05580 4.42172 3.16396 1.46634 0.26236 1.31842 0.31137 16 2.06946 1.61921 1.77186 0.68186 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.03148 4.39101 3.98438 1.46634 0.26236 0.93589 0.49797 17 1.91833 0.92495 1.65763 1.32424 19 c - - < 1.38629 1.38629 1.38629 1.38629 0.23100 4.40273 1.63982 1.46634 0.26236 1.66834 0.20895 18 1.02726 2.15506 1.36127 1.31014 20 a - - - 1.38629 1.38629 1.38629 1.38629 0.18235 4.20212 1.88568 1.46634 0.26236 2.59654 0.07745 19 1.53944 0.88220 2.30278 1.30324 21 c - - - 1.38629 1.38629 1.38629 1.38629 0.21978 4.06372 1.71413 1.46634 0.26236 0.07201 2.66678 20 1.45474 1.98075 0.85807 1.58673 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.02721 4.31075 4.31075 1.46634 0.26236 0.17464 1.83108 21 1.91756 0.83113 1.94594 1.29235 23 c - - < 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 22 1.74784 2.30651 0.47811 2.24157 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 23 2.17762 0.70851 2.02022 1.34061 25 c - - < 1.38629 1.38629 1.38629 1.38629 0.13001 4.43055 2.20722 1.46634 0.26236 1.09861 0.40547 24 3.05956 0.23478 3.00985 2.17994 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.02676 4.32730 4.32730 1.46634 0.26236 0.57283 0.82995 25 0.22121 2.43606 3.01071 2.78561 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02498 4.39540 4.39540 1.46634 0.26236 0.41393 1.08190 26 2.04090 2.47228 2.57901 0.34271 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 27 2.18792 0.47294 2.18057 1.88583 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 28 1.65892 0.51043 2.60682 1.99768 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 29 1.75830 3.23704 0.31883 2.79065 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.19385 2.71493 2.20722 0.32757 1.27538 1.09861 0.40547 30 2.40599 3.16883 0.20201 2.98219 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.02676 4.32730 4.32730 1.46634 0.26236 0.19597 1.72616 31 1.53397 2.17909 0.65148 1.89774 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.02755 4.43055 4.18240 1.46634 0.26236 1.09861 0.40547 32 2.42987 0.60105 2.14405 1.40025 35 C - - > 1.38629 1.38629 1.38629 1.38629 0.02419 4.42719 4.42719 1.46634 0.26236 0.94020 0.49520 33 1.67578 2.00044 0.67735 1.77431 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 34 1.86433 0.98040 1.82763 1.17427 37 c - - > 1.38629 1.38629 1.38629 1.38629 0.60379 1.07024 2.20423 0.34015 1.24362 1.09861 0.40547 35 1.15682 1.38138 2.13628 1.15140 40 u - - - 1.38629 1.38629 1.38629 1.38629 0.05852 3.92030 3.29674 1.53405 0.24291 0.19544 1.72861 36 1.63031 1.81042 0.76746 1.73527 46 g - - > 1.38629 1.38629 1.38629 1.38629 0.04975 3.31419 4.40886 0.57253 0.83034 1.56895 0.23353 37 0.77153 1.90984 1.37964 1.98108 48 a - - > 1.38629 1.38629 1.38629 1.38629 0.02464 4.40886 4.40886 1.46634 0.26236 1.56895 0.23353 38 1.84306 1.54460 0.91659 1.47670 49 g - - > 1.38629 1.38629 1.38629 1.38629 0.02464 4.40886 4.40886 1.46634 0.26236 0.53876 0.87580 39 2.32649 0.39909 2.69886 1.80698 50 C - - , 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 40 0.29063 2.90643 2.24739 2.38751 51 A - - , 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 41 2.01252 2.19802 0.44672 2.15761 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 42 3.20132 1.61039 2.99597 0.34320 53 U - - < 1.38629 1.38629 1.38629 1.38629 0.04744 4.43055 3.36901 1.46634 0.26236 1.09861 0.40547 43 1.77623 2.07907 0.50289 2.29366 54 G - - < 1.38629 1.38629 1.38629 1.38629 0.17059 4.40777 1.93341 1.46634 0.26236 1.58736 0.22874 44 2.43267 1.26239 2.04108 0.69448 55 u - - < 1.38629 1.38629 1.38629 1.38629 0.17117 4.26567 1.94295 1.46634 0.26236 1.36302 0.29556 45 2.71859 1.49092 2.50469 0.46654 56 U - - < 1.38629 1.38629 1.38629 1.38629 0.70331 0.76687 3.20419 1.12470 0.39267 0.13351 2.07961 46 1.73932 1.71337 1.97939 0.68132 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.11009 4.40178 2.38603 1.46634 0.26236 0.46465 0.98982 47 1.52571 1.79762 2.17117 0.68757 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02616 4.34990 4.34990 1.46634 0.26236 0.42909 1.05297 48 1.02590 1.75333 1.66715 1.27459 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02449 4.41474 4.41474 1.46634 0.26236 0.62233 0.76936 49 1.14490 1.69553 1.76685 1.11666 65 u - - _ 1.38629 1.38629 1.38629 1.38629 0.72554 0.82871 2.53422 1.14921 0.38109 1.09861 0.40547 50 0.69091 2.66668 1.06091 2.48583 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.13744 4.36075 2.15725 1.46634 0.26236 1.48947 0.25553 51 0.92833 2.18696 0.96214 2.20314 75 a - - > 1.38629 1.38629 1.38629 1.38629 0.12573 2.26233 4.26567 0.27939 1.41161 0.28343 1.39917 52 2.61164 0.55558 1.94933 1.55838 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.02467 4.40777 4.40777 1.46634 0.26236 0.52582 0.89421 53 0.39730 3.15431 1.45632 2.95441 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 54 2.34837 0.53256 2.05747 1.66284 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 55 1.44613 2.09473 0.67114 2.03800 81 G - - < 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 56 1.41702 3.08466 0.41811 2.92748 82 G - - < 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 57 1.72605 3.11977 0.31947 2.96980 83 G - - < 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 58 4.55080 0.04633 4.56347 3.71765 84 C - - < 1.38629 1.38629 1.38629 1.38629 0.07759 2.84661 4.09748 0.36950 1.17467 1.09861 0.40547 59 0.48390 2.93269 1.38561 2.52326 86 A - - _ 1.38629 1.38629 1.38629 1.38629 0.59773 1.43231 1.55501 0.09737 2.37749 0.88931 0.52923 60 2.10522 0.87711 2.72303 0.92502 88 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03016 4.20954 4.20954 1.46634 0.26236 0.12288 2.15734 61 1.85610 1.87222 2.42961 0.50772 89 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02418 4.42730 4.42730 1.46634 0.26236 0.94465 0.49236 62 2.72529 0.42045 3.36963 1.41339 90 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 63 2.74579 0.21872 3.12250 2.42807 91 C - - _ 1.38629 1.38629 1.38629 1.38629 0.07252 2.84661 4.43055 0.36950 1.17467 1.09861 0.40547 64 3.88378 4.72678 0.04091 4.54137 93 G - - > 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 65 3.21935 0.35282 2.93416 1.58897 94 C - - > 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 66 3.17937 0.46838 2.89580 1.28331 95 C - - > 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 67 2.24527 0.79694 1.94848 1.20096 96 c - - > 1.38629 1.38629 1.38629 1.38629 0.10371 2.68970 3.48649 0.32006 1.29502 1.09861 0.40547 68 1.34321 3.53318 0.39650 3.29388 98 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02457 4.41167 4.41167 1.46634 0.26236 0.57554 0.82645 69 3.17919 4.27614 0.07562 4.05610 99 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 70 0.68552 2.99779 0.95335 2.79973 100 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 71 3.27906 1.64492 3.08133 0.32378 101 U - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 72 3.05326 4.13977 0.08657 3.92217 102 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 73 0.30900 3.49797 1.62055 3.27622 103 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 74 3.09900 4.16256 0.08347 3.94170 104 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 75 3.24627 4.35492 0.07011 4.13853 105 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 76 0.05496 4.22449 3.86923 4.01885 106 A - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 77 3.64159 4.62069 0.05311 4.15617 107 G - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 78 0.10936 3.72517 2.98960 3.53429 108 A - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 79 0.85081 2.85023 0.86202 2.37740 109 a - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 80 0.17315 3.44829 2.43388 3.23172 110 A - - : 1.38629 1.38629 1.38629 1.38629 0.02410 4.43055 4.43055 1.46634 0.26236 1.09861 0.40547 81 2.97608 4.09442 0.10037 3.58126 111 G - - : 1.38629 1.38629 1.38629 1.38629 0.02858 4.43055 4.11887 1.46634 0.26236 1.09861 0.40547 82 1.33908 2.11276 1.37131 1.01271 112 u - - : 1.38629 1.38629 1.38629 1.38629 0.01218 4.41415 * 1.46634 0.26236 0.00000 * //