INFERNAL1/a [1.1.5 | Sep 2023] NAME mt-tmRNA ACC RF02544 DESC Mitochondrion-encoded tmRNA STATES 240 NODES 64 CLEN 77 W 133 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 08:18:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02544/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 11 EFFN 2.247803 CKSUM 535720593 NULL 0.000 0.000 0.000 0.000 GA 65.00 TC 65.90 NC 58.30 EFP7GF -9.3445 0.71888 ECMLC 0.62753 -4.50702 4.00452 1600000 250525 0.004790 ECMGC 0.40971 -12.46298 0.15859 1600000 70451 0.005678 ECMLI 0.58071 -3.06930 5.81489 1600000 208814 0.005747 ECMGI 0.45245 -7.08513 3.83276 1600000 55896 0.007156 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 0 1 133 204 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 IL 1 1 2 1 6 1 29 134 205 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 29 134 205 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 99 u a - - MP 3 2 3 7 6 4 33 133 204 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -1.269 -2.310 -2.476 1.553 -2.267 -3.317 1.587 -2.670 -2.521 1.266 -3.065 -0.545 2.021 -2.618 -0.212 -1.591 ML 4 2 3 7 6 1 26 131 202 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 26 130 202 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 21 126 198 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 28 132 203 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 28 132 203 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 98 a u - - MP 9 8 6 13 6 3 31 131 202 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.141 -2.801 -3.174 2.305 -2.744 -3.943 1.823 -3.196 -3.220 1.340 -3.692 -0.704 1.293 -3.334 -0.468 -2.145 ML 10 8 6 13 6 1 26 129 200 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 25 128 200 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 21 125 196 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 27 130 201 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 28 130 201 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 97 a u - - MP 15 14 6 19 6 3 30 129 200 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.185 -2.724 -3.236 2.458 -2.943 -4.104 1.287 -3.284 -3.244 1.335 -3.738 -0.518 1.615 -3.451 -0.669 -2.185 ML 16 14 6 19 6 1 25 127 198 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 24 127 198 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 123 194 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 27 128 199 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 27 128 199 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 96 A U - - MP 21 20 6 25 6 3 28 127 198 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.006 -2.984 -4.007 3.454 -4.454 -5.539 -0.139 -4.034 -3.891 0.847 -4.449 -0.426 -0.556 -4.689 -2.079 -2.829 ML 22 20 6 25 6 1 24 125 196 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 23 125 196 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 20 121 193 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 26 126 197 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 26 126 197 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 95 U A - - MP 27 26 6 31 6 3 26 125 196 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.937 -3.863 -3.766 -0.127 -2.650 -4.297 1.940 -3.380 -3.785 0.115 -4.148 -1.838 3.040 -4.059 -0.329 -2.644 ML 28 26 6 31 6 1 23 123 195 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 22 123 194 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 19 120 192 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 24 124 195 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 24 124 195 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 94 G C - - MP 33 32 6 37 4 2 24 123 194 -7.073 -7.280 -0.049 -5.694 -4.973 -3.205 -5.097 0.044 -5.558 -4.783 -0.865 -5.354 -4.476 3.689 -4.797 -0.914 -1.244 -4.618 -2.915 -3.970 ML 34 32 6 37 4 1 22 122 193 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 20 121 192 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 19 120 191 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 23 123 194 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 23 122 194 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 39 38 6 41 3 1 23 121 192 -8.081 -0.019 -6.735 -0.798 -2.334 1.550 -1.749 D 40 38 6 41 3 0 18 119 190 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 22 121 193 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 42 41 3 44 3 1 22 120 191 -8.081 -0.019 -6.735 1.765 -2.608 -2.216 -2.174 D 43 41 3 44 3 0 18 118 189 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 21 121 192 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - C - - - ML 45 44 3 47 3 1 21 119 190 -8.464 -0.017 -6.781 -0.376 1.154 -1.677 -0.532 D 46 44 3 47 3 0 17 117 188 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 20 119 190 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 93 - A - - MR 48 47 3 50 3 1 20 118 189 -8.464 -0.017 -6.781 1.765 -2.608 -2.216 -2.174 D 49 47 3 50 3 0 15 116 187 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 19 118 189 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 92 - G - - MR 51 50 3 53 3 1 19 117 188 -3.532 -0.145 -6.781 -1.828 -3.085 1.774 -2.472 D 52 50 3 53 3 0 14 115 186 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 19 117 188 -2.298 -0.408 -4.536 0.000 0.000 0.000 0.000 [ MATR 12 ] - 90 - U - - MR 54 53 3 56 3 1 18 116 187 -8.464 -0.017 -6.781 -1.704 -1.662 -2.448 1.675 D 55 53 3 56 3 0 14 114 185 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 18 116 187 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 89 - U - - MR 57 56 3 59 3 1 17 115 186 -8.464 -0.017 -6.781 -1.704 -1.662 -2.448 1.675 D 58 56 3 59 3 0 13 113 184 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 17 115 186 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 88 - A - - MR 60 59 3 62 3 1 16 114 185 -8.464 -0.017 -6.781 1.508 -1.876 -0.989 -1.396 D 61 59 3 62 3 0 12 112 183 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 16 114 185 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 87 - A - - MR 63 62 3 65 3 1 15 113 184 -8.464 -0.017 -6.781 1.084 -1.124 -1.203 -0.020 D 64 62 3 65 3 0 11 111 182 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 15 113 184 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 86 - G - - MR 66 65 3 68 3 1 14 112 183 -4.470 -0.080 -6.781 -1.828 -3.085 1.774 -2.472 D 67 65 3 68 3 0 11 110 181 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 14 112 184 -1.367 -0.802 -4.697 0.000 0.000 0.000 0.000 [ MATR 17 ] - 82 - A - - MR 69 68 3 71 3 1 13 111 182 -8.464 -0.017 -6.781 1.765 -2.608 -2.216 -2.174 D 70 68 3 71 3 0 10 109 180 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 13 111 182 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 81 - U - - MR 72 71 3 74 3 1 13 110 181 -8.464 -0.017 -6.781 -0.721 -1.147 -1.706 1.398 D 73 71 3 74 3 0 9 108 179 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 12 110 181 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 80 - a - - MR 75 74 3 77 3 1 12 109 180 -8.464 -0.017 -6.781 0.928 -1.020 -1.140 0.202 D 76 74 3 77 3 0 9 107 178 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 12 109 180 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 79 - A - - MR 78 77 3 80 3 1 11 108 179 -8.464 -0.017 -6.781 1.113 -1.148 -1.218 -0.065 D 79 77 3 80 3 0 8 106 177 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 11 108 179 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 78 - U - - MR 81 80 3 83 3 1 10 107 178 -8.464 -0.017 -6.781 -0.336 -1.021 -1.481 1.237 D 82 80 3 83 3 0 8 105 177 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 10 107 178 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 77 - A - - MR 84 83 3 86 2 1 9 106 177 -8.495 -0.004 1.306 -1.354 -1.361 -0.420 D 85 83 3 86 2 0 8 105 176 -4.432 -0.068 IR 86 86 3 86 2 1 9 106 178 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 23 ] - - - - - - B 87 86 3 88 141 0 8 105 176 [ BEGL 24 ] - - - - - - S 88 87 1 89 4 0 0 31 49 -0.043 -6.898 -6.305 -6.945 [ MATP 25 ] 10 26 C G - - MP 89 88 1 93 6 2 2 31 49 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.262 -4.208 -3.998 -0.412 -2.737 -4.444 3.365 -3.522 -4.028 -0.185 -4.334 -2.175 1.231 -4.334 -0.413 -2.864 ML 90 88 1 93 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 91 88 1 93 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 92 88 1 93 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 93 93 5 93 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 11 25 C G - - MP 95 94 6 99 6 2 2 29 47 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.806 -4.734 -4.452 -0.945 -3.116 -4.830 3.623 -3.952 -4.511 -0.738 -4.743 -2.686 0.371 -4.858 -0.830 -3.342 ML 96 94 6 99 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 97 94 6 99 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 98 94 6 99 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 99 99 5 99 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 100 100 6 100 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 12 24 a u - - MP 101 100 6 105 6 2 2 27 45 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.553 -2.573 -3.622 2.927 -4.093 -4.828 0.239 -3.797 -3.531 2.047 -4.061 -0.102 -0.070 -3.994 -1.696 -2.468 ML 102 100 6 105 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 103 100 6 105 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 104 100 6 105 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 105 105 5 105 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 106 106 6 106 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 13 23 a u - - MP 107 106 6 111 6 2 2 25 43 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.193 -2.578 -3.274 2.964 -3.540 -4.339 0.455 -3.503 -3.294 1.381 -3.829 0.255 0.193 -3.552 -1.362 -0.649 ML 108 106 6 111 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 109 106 6 111 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 110 106 6 111 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 111 111 5 111 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 112 112 6 112 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 14 22 a u - - MP 113 112 6 117 6 2 2 23 41 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.553 -2.573 -3.622 2.927 -4.093 -4.828 0.239 -3.797 -3.531 2.047 -4.061 -0.102 -0.070 -3.994 -1.696 -2.468 ML 114 112 6 117 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 6 117 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 6 117 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 15 21 g a - - MP 119 118 6 123 4 2 2 21 39 -7.073 -7.280 -0.049 -5.694 -3.034 -2.255 -3.239 1.054 -3.519 -4.263 0.370 -3.374 2.172 1.215 -3.545 1.721 0.084 -3.581 -1.399 -2.153 ML 120 118 6 123 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 122 118 6 123 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 123 123 5 123 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 124 124 6 124 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 16 - G - - - ML 125 124 6 127 3 1 1 17 36 -8.081 -0.019 -6.735 -1.828 -3.085 1.774 -2.472 D 126 124 6 127 3 0 0 17 36 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 17 - C - - - ML 128 127 3 130 3 1 1 16 35 -8.081 -0.019 -6.735 -2.027 1.693 -2.857 -1.383 D 129 127 3 130 3 0 0 16 34 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 18 - a - - - ML 131 130 3 133 3 1 1 15 33 -8.081 -0.019 -6.735 0.935 -1.489 0.266 -0.916 D 132 130 3 133 3 0 0 15 33 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 19 - G - - - ML 134 133 3 136 3 1 1 13 31 -8.081 -0.019 -6.735 -1.828 -3.085 1.774 -2.472 D 135 133 3 136 3 0 0 13 32 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 20 - U - - - ML 137 136 3 139 2 1 1 1 1 * 0.000 -0.342 -1.023 -1.484 1.240 D 138 136 3 139 2 0 0 0 0 * 0.000 IL 139 139 3 139 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 36 ] - - - - - - E 140 139 3 -1 0 0 0 0 0 [ BEGR 37 ] - - - - - - S 141 87 1 142 5 0 0 88 159 -7.195 -0.036 -7.011 -7.223 -8.115 IL 142 142 2 142 5 1 1 89 160 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 27 76 u a - - MP 143 142 2 147 6 2 2 88 159 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.848 -3.783 -3.694 -0.043 -2.597 -4.240 2.135 -3.321 -3.711 0.199 -4.084 -1.762 2.900 -3.976 -0.275 -2.577 ML 144 142 2 147 6 1 1 86 157 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 145 142 2 147 6 1 1 86 157 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 146 142 2 147 6 0 0 81 153 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 147 147 5 147 6 1 1 87 158 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 148 148 6 148 5 1 1 87 158 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 75 A U - - MP 149 148 6 153 6 2 2 86 157 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.006 -2.984 -4.007 3.454 -4.454 -5.539 -0.139 -4.034 -3.891 0.847 -4.449 -0.426 -0.556 -4.689 -2.079 -2.829 ML 150 148 6 153 6 1 1 84 155 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 151 148 6 153 6 1 1 84 155 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 152 148 6 153 6 0 0 80 151 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 153 153 5 153 6 1 1 85 156 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 154 154 6 154 5 1 1 85 156 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 29 74 U A - - MP 155 154 6 159 6 2 2 84 155 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.469 -4.300 -4.276 -0.576 -3.160 -4.814 1.173 -3.874 -4.278 -0.360 -4.637 -2.190 3.446 -4.609 -0.829 -3.073 ML 156 154 6 159 6 1 1 82 153 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 157 154 6 159 6 1 1 82 153 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 158 154 6 159 6 0 0 78 149 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 159 159 5 159 6 1 1 83 155 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 160 160 6 160 5 1 1 83 154 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 30 73 u a - - MP 161 160 6 165 6 2 2 82 153 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -3.508 -3.480 -3.453 0.202 -2.516 -4.088 2.134 -3.189 -3.462 0.411 -3.891 -1.515 2.569 -3.686 0.852 -2.366 ML 162 160 6 165 6 1 1 80 151 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 163 160 6 165 6 1 1 80 151 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 6 165 6 0 0 76 147 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 165 165 5 165 6 1 1 81 153 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 1 81 152 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 31 72 U G - - MP 167 166 6 171 6 2 2 80 151 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.334 -4.264 -3.980 -0.576 -2.666 -4.365 1.626 -3.460 -4.023 -0.424 -4.290 -2.258 0.745 -4.396 3.146 -2.882 ML 168 166 6 171 6 1 1 78 149 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 6 171 6 1 1 78 149 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 6 171 6 0 0 75 146 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 1 79 151 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 79 150 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 32 71 C G - - MP 173 172 6 177 6 2 2 78 149 -9.156 -9.096 -0.020 -7.872 -8.152 -8.547 -4.806 -4.734 -4.452 -0.945 -3.116 -4.830 3.623 -3.952 -4.511 -0.738 -4.743 -2.686 0.371 -4.858 -0.830 -3.342 ML 174 172 6 177 6 1 1 77 148 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 6 1 1 76 147 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 176 172 6 177 6 0 0 74 145 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 177 177 5 177 6 1 1 77 149 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 178 178 6 178 5 1 1 77 148 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 33 70 C G - - MP 179 178 6 183 4 2 2 76 147 -7.073 -7.280 -0.049 -5.694 -4.806 -4.734 -4.452 -0.945 -3.116 -4.830 3.623 -3.952 -4.511 -0.738 -4.743 -2.686 0.371 -4.858 -0.830 -3.342 ML 180 178 6 183 4 1 1 75 146 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 181 178 6 183 4 1 1 74 145 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 182 178 6 183 4 0 0 73 144 -4.568 -4.250 -2.265 -0.520 IL 183 183 5 183 4 1 1 76 147 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 184 184 6 184 3 1 1 76 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 34 - A - - - ML 185 184 6 187 3 1 1 74 145 -8.081 -0.019 -6.735 1.479 -1.638 -1.562 -0.854 D 186 184 6 187 3 0 0 72 143 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 75 146 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 35 - U - - - ML 188 187 3 190 3 1 1 73 144 -8.081 -0.019 -6.735 -0.726 -1.149 -1.709 1.400 D 189 187 3 190 3 0 0 71 142 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 74 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 36 - a - - - ML 191 190 3 193 3 1 1 72 143 -8.081 -0.019 -6.735 0.741 -0.941 -1.108 0.426 D 192 190 3 193 3 0 0 70 141 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 73 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 37 - U - - - ML 194 193 3 196 3 1 1 71 142 -8.081 -0.019 -6.735 -0.067 -0.951 -1.336 1.092 D 195 193 3 196 3 0 0 68 140 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 72 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 38 - A - - - ML 197 196 3 199 3 1 1 70 141 -8.081 -0.019 -6.735 1.063 -1.108 -1.192 0.013 D 198 196 3 199 3 0 0 67 139 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 71 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 39 - a - - - ML 200 199 3 202 3 1 1 69 140 -8.081 -0.097 -4.026 0.863 -0.963 -0.739 0.097 D 201 199 3 202 3 0 0 66 137 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 70 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 40 - A - - - ML 203 202 3 205 3 1 1 68 140 -8.004 -0.089 -4.158 1.031 -1.058 -1.139 0.032 D 204 202 3 205 3 0 0 63 135 -6.779 -2.292 -0.346 IL 205 205 3 205 3 1 1 69 140 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 41 - u - - - ML 206 205 3 208 3 1 1 68 139 -7.936 -0.158 -3.329 -0.152 -0.520 -1.198 0.976 D 207 205 3 208 3 0 0 60 132 -7.144 -2.657 -0.261 IL 208 208 3 208 3 1 1 68 140 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 42 - u - - - ML 209 208 3 211 3 1 1 67 138 -2.135 -0.520 -3.741 -0.053 -0.728 -0.350 0.721 D 210 208 3 211 3 0 0 51 122 -7.642 -3.155 -0.180 IL 211 211 3 211 3 1 1 72 143 -0.373 -2.211 -6.407 0.000 0.000 0.000 0.000 [ MATL 54 ] 61 - A - - - ML 212 211 3 214 3 1 1 22 41 -7.706 -0.115 -3.795 1.581 -1.860 -1.544 -1.357 D 213 211 3 214 3 0 0 21 40 -7.892 -1.393 -0.701 IL 214 214 3 214 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 62 - a - - - ML 215 214 3 217 3 1 1 21 40 -7.793 -0.023 -6.447 0.729 -0.285 -0.927 -0.005 D 216 214 3 217 3 0 0 20 39 -7.665 -0.815 -1.229 IL 217 217 3 217 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 63 - a - - - ML 218 217 3 220 3 1 1 20 39 -8.003 -0.020 -6.657 0.608 -0.873 -1.068 0.539 D 219 217 3 220 3 0 0 19 38 -6.781 -2.294 -0.345 IL 220 220 3 220 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - u - - - ML 221 220 3 223 3 1 1 19 37 -8.003 -0.020 -6.657 0.324 -0.852 -1.124 0.795 D 222 220 3 223 3 0 0 18 36 -6.781 -2.294 -0.345 IL 223 223 3 223 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 65 - u - - - ML 224 223 3 226 3 1 1 17 36 -8.003 -0.020 -6.657 0.281 -0.854 -1.138 0.830 D 225 223 3 226 3 0 0 17 35 -6.781 -0.869 -1.173 IL 226 226 3 226 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 66 - a - - - ML 227 226 3 229 3 1 1 16 35 -8.081 -0.019 -6.735 0.870 -0.970 -0.712 0.072 D 228 226 3 229 3 0 0 16 34 -6.174 -1.687 -0.566 IL 229 229 3 229 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 67 - a - - - ML 230 229 3 232 3 1 1 15 33 -8.081 -0.019 -6.735 0.594 -0.906 -1.110 0.579 D 231 229 3 232 3 0 0 15 33 -6.174 -1.687 -0.566 IL 232 232 3 232 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 68 - a - - - ML 233 232 3 235 3 1 1 13 31 -8.081 -0.019 -6.735 0.535 -0.581 -1.046 0.483 D 234 232 3 235 3 0 0 13 32 -6.174 -1.687 -0.566 IL 235 235 3 235 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 69 - a - - - ML 236 235 3 238 2 1 1 1 1 * 0.000 0.693 -0.620 -1.045 0.320 D 237 235 3 238 2 0 0 0 0 * 0.000 IL 238 238 3 238 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 63 ] - - - - - - E 239 238 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mt-tmRNA ACC RF02544 DESC Mitochondrion-encoded tmRNA LENG 77 MAXL 197 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 08:18:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02544/CM NSEQ 11 EFFN 3.418701 CKSUM 535720593 STATS LOCAL MSV -8.3861 0.71888 STATS LOCAL VITERBI -9.3531 0.71888 STATS LOCAL FORWARD -3.5701 0.71888 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.17619 1.76471 1.46584 1.23985 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 0.00000 * 1 1.38277 1.60746 1.68666 1.01174 1 u - - ( 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 2 0.94226 1.43180 1.80069 1.57895 2 a - - ( 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 3 0.81329 1.97747 1.79252 1.37975 3 a - - ( 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 4 0.19547 3.36149 2.25623 3.26699 4 A - - ( 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 5 2.98614 1.46182 2.76286 0.42374 5 U - - ( 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 6 2.88594 3.69254 0.11337 3.63178 6 G - - ( 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 7 2.14644 3.38553 0.22375 3.00119 7 G - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 8 0.09513 3.69628 3.37829 3.44748 8 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 9 1.78554 0.44745 2.87986 1.98854 9 C - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 10 3.15283 0.32543 2.93518 1.70411 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 11 3.68934 0.14778 3.51273 2.49410 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 12 0.53029 2.90556 1.22788 2.74995 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 13 0.47808 2.76758 1.59008 2.17770 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 14 0.53055 2.90408 1.22803 2.74806 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 15 2.10095 3.03469 0.25806 2.86428 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 16 3.15424 4.08637 0.08922 3.65420 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 17 3.39464 0.11788 3.95761 2.83806 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 18 0.66872 2.68037 1.14315 2.29976 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 19 3.15424 4.08637 0.08922 3.65420 19 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 20 1.72877 2.31221 2.66297 0.42508 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 21 0.79654 2.19970 2.82804 0.96983 21 a - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 22 2.96579 1.39341 2.70565 0.45661 22 U - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 23 2.81324 2.02068 2.56881 0.31362 23 U - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 24 2.96494 1.39344 2.70528 0.45671 24 U - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 25 2.76825 3.66488 0.12848 3.43610 25 G - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 26 1.90417 3.08465 0.28814 2.88864 26 G - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 27 2.91331 1.29000 2.68037 0.50767 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 28 0.19510 3.36419 2.25688 3.27058 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 29 3.54058 2.33871 3.34273 0.17529 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 30 2.64370 1.27907 2.42100 0.57666 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 31 3.33513 1.81355 3.17742 0.27493 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 32 3.67800 0.14852 3.50667 2.49197 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 33 3.67560 0.14868 3.50539 2.49151 33 C - - < 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 34 0.27632 2.78053 2.75201 2.15742 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 35 2.08530 2.43804 2.87671 0.31187 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 36 0.81508 2.17857 2.29677 1.06825 36 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 37 1.48094 2.23144 2.51466 0.53732 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 38 0.57131 2.31879 2.38992 1.40575 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 39 0.72883 2.17565 1.96548 1.33218 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.09827 4.11998 2.55941 1.46634 0.26236 1.09861 0.40547 40 0.59537 2.26986 2.33932 1.39061 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09355 4.05693 2.63098 1.46634 0.26236 1.91125 0.16005 41 1.55045 1.81045 2.36399 0.63446 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.15470 4.00067 2.07922 1.46634 0.26236 2.29489 0.10622 42 1.46711 1.98424 1.62725 0.83137 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.49587 1.22740 2.32378 2.08649 0.13253 2.75711 0.06558 43 0.18801 3.06225 2.80390 2.74822 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12631 3.80724 2.33876 1.46634 0.26236 0.91747 0.51004 44 0.82277 1.57534 2.13857 1.44382 62 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88129 3.88129 1.46634 0.26236 0.44555 1.02296 45 0.92036 2.11853 2.25643 0.97633 63 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03523 4.05664 4.05664 1.46634 0.26236 1.91369 0.15962 46 1.14837 2.11372 2.30655 0.77121 64 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03523 4.05664 4.05664 1.46634 0.26236 1.91369 0.15962 47 1.18467 2.11801 2.32028 0.74310 65 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03523 4.05664 4.05664 1.46634 0.26236 0.34966 1.22054 48 0.72390 2.18039 1.94261 1.35164 66 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 49 0.92998 2.15326 2.29524 0.94521 67 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 50 0.97418 1.84462 2.22113 1.03303 68 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 51 0.85189 1.87460 2.22847 1.16385 69 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 52 2.77212 3.67093 0.12778 3.44291 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 53 2.77320 3.67263 0.12758 3.44483 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 54 2.39964 3.36171 0.18858 3.06965 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 55 0.81505 2.59018 0.93431 2.41332 73 a - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 56 0.19886 3.53752 2.17474 3.28037 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 57 3.50074 2.60566 3.17305 0.15771 75 U - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 58 0.57142 2.84888 1.17728 2.66996 76 A - - > 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 59 0.39513 2.53240 2.55886 1.77464 77 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 60 1.72281 2.31017 2.65935 0.42741 78 U - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 61 0.53435 2.35353 2.41687 1.47091 79 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 62 0.67230 2.24395 2.33478 1.24967 80 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 63 2.08038 2.43624 2.87381 0.31314 81 U - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 64 0.09513 3.69628 3.37829 3.44748 82 A - - , 1.38629 1.38629 1.38629 1.38629 0.08926 2.67154 4.11998 1.16547 0.37364 1.09861 0.40547 65 3.15424 4.08637 0.08922 3.65420 86 G - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 66 0.55544 2.33316 2.40101 1.43311 87 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 67 0.26107 3.00052 2.17516 2.71169 88 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 68 3.04688 2.93879 3.57837 0.13738 89 U - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 69 3.04688 2.93879 3.57837 0.13738 90 U - - , 1.38629 1.38629 1.38629 1.38629 0.14743 2.11333 4.11998 0.25010 1.50833 1.09861 0.40547 70 3.15424 4.08637 0.08922 3.65420 92 G - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 71 0.09513 3.69628 3.37829 3.44748 93 A - - , 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 72 3.81045 0.13607 3.53889 2.57658 94 C - - ) 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 73 0.47963 2.92996 1.33495 2.74236 95 A - - ) 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 74 3.49194 2.60421 3.16920 0.15834 96 U - - ) 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 75 1.50335 1.99981 1.80458 0.73875 97 u - - ) 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 76 1.77717 1.96414 1.30403 0.86948 98 u - - ) 1.38629 1.38629 1.38629 1.38629 0.03303 4.11998 4.11998 1.46634 0.26236 1.09861 0.40547 77 1.08469 1.85732 1.42323 1.32815 99 a - - ) 1.38629 1.38629 1.38629 1.38629 0.01665 4.10360 * 1.46634 0.26236 0.00000 * //