INFERNAL1/a [1.1.5 | Sep 2023] NAME SpR14_sRNA ACC RF02445 DESC Streptococcus sRNA SpR14 STATES 244 NODES 65 CLEN 80 W 100 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 04:39:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02445/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 1.596680 CKSUM 1311438670 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 79.40 NC 47.10 EFP7GF -7.0511 0.71876 ECMLC 0.52403 -6.55067 4.67338 1600000 430120 0.002790 ECMGC 0.40615 -10.68792 3.04992 1600000 105982 0.003774 ECMLI 0.50133 -3.77530 6.61398 1600000 219382 0.005470 ECMGI 0.45074 -4.93957 6.43470 1600000 67391 0.005936 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 100 121 -6.805 -7.012 -0.224 -2.978 IL 1 1 2 1 4 1 25 103 125 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 102 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 24 100 121 -7.687 -0.025 -6.341 -0.994 -1.081 -1.696 1.442 D 4 2 3 5 3 0 19 98 119 -7.027 -2.540 -0.286 IL 5 5 3 5 3 1 24 101 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 23 99 120 -7.687 -0.025 -6.341 -0.994 -1.081 -1.696 1.442 D 7 5 3 8 3 0 19 97 118 -7.027 -2.540 -0.286 IL 8 8 3 8 3 1 23 100 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - g - - - ML 9 8 3 11 3 1 22 98 119 -7.687 -0.025 -6.341 -0.246 -0.511 0.757 -0.387 D 10 8 3 11 3 0 19 96 118 -7.027 -2.540 -0.286 IL 11 11 3 11 3 1 22 99 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 1 21 97 118 -7.687 -0.025 -6.341 0.971 -0.924 -0.962 -0.002 D 13 11 3 14 3 0 18 95 117 -7.027 -0.694 -1.418 IL 14 14 3 14 3 1 21 98 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 21 96 117 -7.832 -0.023 -6.486 -0.783 1.003 -1.579 0.110 D 16 14 3 17 3 0 16 94 116 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 20 97 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 20 95 116 -7.832 -0.023 -6.486 1.105 -1.069 -1.093 -0.148 D 19 17 3 20 3 0 16 93 115 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 20 96 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - u - - - ML 21 20 3 23 3 1 19 94 115 -8.231 -0.020 -6.549 0.316 -0.228 -0.951 0.469 D 22 20 3 23 3 0 15 92 114 -5.620 -0.734 -1.403 IL 23 23 3 23 3 1 18 94 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 84 - U - - MR 24 23 3 26 3 1 18 93 114 -8.231 -0.020 -6.549 -0.072 -0.804 -1.181 1.025 D 25 23 3 26 3 0 13 91 113 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 17 93 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 83 - A - - MR 27 26 3 29 3 1 17 92 113 -8.231 -0.020 -6.549 1.079 -1.046 -1.079 -0.106 D 28 26 3 29 3 0 12 90 112 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 17 92 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 82 - U - - MR 30 29 3 32 3 1 16 91 112 -8.231 -0.020 -6.549 -1.245 -1.285 -1.965 1.542 D 31 29 3 32 3 0 11 89 111 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 16 91 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 81 - A - - MR 33 32 3 35 3 1 16 90 111 -8.231 -0.020 -6.549 1.655 -2.106 -1.765 -1.624 D 34 32 3 35 3 0 10 88 110 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 15 90 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 80 - U - - MR 36 35 3 38 3 1 15 89 110 -8.231 -0.020 -6.549 -0.726 -0.297 -1.460 1.149 D 37 35 3 38 3 0 9 87 109 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 14 89 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 79 - G - - MR 39 38 3 41 3 1 14 88 109 -8.231 -0.020 -6.549 -0.065 -1.603 1.148 -1.002 D 40 38 3 41 3 0 8 86 108 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 13 88 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 78 - U - - MR 42 41 3 44 3 1 13 87 108 -8.231 -0.020 -6.549 -1.245 -1.285 -1.965 1.542 D 43 41 3 44 3 0 7 85 106 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 12 87 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 77 - A - - MR 45 44 3 47 3 1 12 86 107 -8.231 -0.020 -6.549 1.655 -2.106 -1.765 -1.624 D 46 44 3 47 3 0 7 84 105 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 11 86 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 76 - c - - MR 48 47 3 50 3 1 12 85 106 -8.231 -0.020 -6.549 -0.623 0.604 -1.397 0.537 D 49 47 3 50 3 0 6 83 104 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 11 85 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 75 - A - - MR 51 50 3 53 3 1 11 84 105 -8.231 -0.020 -6.549 1.655 -2.106 -1.765 -1.624 D 52 50 3 53 3 0 5 82 103 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 10 84 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 74 - G - - MR 54 53 3 56 3 1 10 83 104 -8.231 -0.020 -6.549 -1.297 -2.471 1.649 -1.856 D 55 53 3 56 3 0 4 81 102 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 9 83 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 73 - G - - MR 57 56 3 59 3 1 10 82 103 -8.231 -0.020 -6.549 -1.297 -2.471 1.649 -1.856 D 58 56 3 59 3 0 3 80 102 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 8 82 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 72 - C - - MR 60 59 3 62 3 1 9 81 102 -8.231 -0.020 -6.549 -1.425 1.526 -2.236 -0.904 D 61 59 3 62 3 0 3 79 101 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 8 81 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 71 - A - - MR 63 62 3 65 5 1 9 80 101 -6.979 -0.042 -6.794 -7.006 -7.898 1.655 -2.106 -1.765 -1.624 D 64 62 3 65 5 0 2 78 100 -5.352 -0.707 -2.978 -4.409 -2.404 IR 65 65 3 65 5 1 6 80 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 8 70 a u - - MP 66 65 3 70 6 2 10 79 100 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -2.460 -2.162 -2.604 2.207 -2.622 -3.484 1.167 -0.480 -2.628 1.540 -3.154 0.507 0.903 -2.772 -0.578 -1.694 ML 67 65 3 70 6 1 4 77 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 3 70 6 1 4 77 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 3 70 6 0 0 74 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 5 78 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 5 78 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 9 69 a u - - MP 72 71 6 76 6 2 8 77 98 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -2.621 -2.105 -2.758 1.927 -2.897 -3.638 0.999 -3.015 -2.761 1.781 -3.262 1.184 0.737 -2.923 -0.779 -0.034 ML 73 71 6 76 6 1 4 75 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 3 75 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 72 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 5 76 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 5 76 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 10 68 A U - - MP 78 77 6 82 6 2 7 75 96 -9.054 -8.994 -0.074 -7.770 -4.698 -8.445 -3.580 -2.668 -3.613 3.174 -3.848 -4.893 0.439 -3.667 -3.515 1.307 -4.052 -0.181 0.020 -4.115 -1.503 -2.461 ML 79 77 6 82 6 1 3 73 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 3 73 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 70 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 4 74 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 4 74 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 11 67 g u - - MP 84 83 6 88 6 2 6 73 94 -9.003 -8.943 -0.023 -7.719 -7.999 -8.394 -3.138 -2.172 -3.263 1.886 -3.711 -4.411 0.546 -3.419 -3.114 1.854 -3.630 2.164 0.254 -3.623 -1.365 -2.104 ML 85 83 6 88 6 1 2 71 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 2 70 92 -7.459 -6.188 -2.097 -6.167 -0.546 -4.380 -0.154 -0.479 -0.770 0.846 D 87 83 6 88 6 0 0 69 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 3 72 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 3 72 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 12 66 c g - - MP 90 89 6 94 4 2 5 71 92 -2.927 -6.865 -0.262 -5.279 -2.926 -2.784 -2.967 1.291 -2.349 -3.698 2.331 -2.901 -2.990 1.174 -3.466 -0.814 1.408 -3.133 0.713 -1.933 ML 91 89 6 94 4 1 2 69 91 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 1 68 89 -5.341 -4.370 -2.238 -0.484 -0.018 -0.914 0.765 -0.354 D 93 89 6 94 4 0 0 67 89 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 4 71 93 -1.326 -1.573 -2.020 -5.757 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 3 68 89 -1.294 -0.856 -4.656 0.000 0.000 0.000 0.000 [ MATL 27 ] 15 - c - - - ML 96 95 6 98 3 1 4 64 84 -7.697 -0.025 -6.351 -0.314 0.633 -0.413 -0.162 D 97 95 6 98 3 0 0 62 82 -6.984 -2.497 -0.295 IL 98 98 3 98 3 1 2 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 16 - A - - - ML 99 98 3 101 3 1 3 63 83 -7.697 -0.025 -6.351 1.574 -1.842 -1.527 -1.337 D 100 98 3 101 3 0 0 61 81 -6.984 -2.497 -0.295 IL 101 101 3 101 3 1 2 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 17 - A - - - ML 102 101 3 104 3 1 2 62 82 -7.697 -0.025 -6.351 1.574 -1.842 -1.527 -1.337 D 103 101 3 104 3 0 0 61 80 -6.984 -0.721 -1.376 IL 104 104 3 104 3 1 1 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 18 - A - - - ML 105 104 3 107 3 1 2 61 80 -8.231 -0.020 -6.549 1.655 -2.106 -1.765 -1.624 D 106 104 3 107 3 0 0 60 79 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 1 62 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 63 - C - - MR 108 107 3 110 3 1 1 60 79 -8.231 -0.020 -6.549 -1.425 1.526 -2.236 -0.904 D 109 107 3 110 3 0 0 58 78 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 61 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 62 - U - - MR 111 110 3 113 3 1 1 59 78 -8.231 -0.020 -6.549 -1.245 -1.285 -1.965 1.542 D 112 110 3 113 3 0 0 57 77 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 60 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 61 - A - - MR 114 113 3 116 5 1 1 58 77 -6.979 -0.042 -6.794 -7.006 -7.898 1.655 -2.106 -1.765 -1.624 D 115 113 3 116 5 0 0 57 76 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 19 60 A U - - MP 117 116 3 121 6 2 2 57 76 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.580 -2.668 -3.613 3.174 -3.848 -4.893 0.439 -3.667 -3.515 1.307 -4.052 -0.181 0.020 -4.115 -1.503 -2.461 ML 118 116 3 121 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 57 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 20 59 A U - - MP 123 122 6 127 6 2 2 55 74 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.580 -2.668 -3.613 3.174 -3.848 -4.893 0.439 -3.667 -3.515 1.307 -4.052 -0.181 0.020 -4.115 -1.503 -2.461 ML 124 122 6 127 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 21 58 a u - - MP 129 128 6 133 6 2 2 53 72 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -0.331 -2.209 -2.660 2.476 -2.722 -3.584 1.044 -2.914 -2.692 1.543 -3.228 -0.174 0.781 -2.854 -0.683 -1.748 ML 130 128 6 133 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 22 57 U A - - MP 135 134 6 139 6 2 2 51 70 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.922 -3.737 -3.789 -0.052 -2.791 -4.377 1.531 -3.467 -3.797 0.246 -4.183 -1.644 3.182 -4.083 -0.473 -2.646 ML 136 134 6 139 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 23 56 U A - - MP 141 140 6 145 6 2 2 49 68 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.922 -3.737 -3.789 -0.052 -2.791 -4.377 1.531 -3.467 -3.797 0.246 -4.183 -1.644 3.182 -4.083 -0.473 -2.646 ML 142 140 6 145 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 24 55 C G - - MP 147 146 6 151 6 2 2 47 66 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -4.285 -4.166 -4.018 -0.424 -2.798 -4.464 3.460 -3.581 -4.060 -0.142 -4.348 -2.111 0.742 -4.371 -0.499 -2.909 ML 148 146 6 151 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 25 54 u g - - MP 153 152 6 157 6 2 2 45 64 -9.054 -8.994 -0.081 -4.509 -8.050 -8.445 -3.479 -3.449 -3.361 0.153 -2.370 -3.920 1.895 -3.071 -3.398 0.407 -3.781 -1.538 1.774 -3.627 2.314 -2.310 ML 154 152 6 157 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 26 53 C G - - MP 159 158 6 163 6 2 2 43 62 -8.997 -8.936 -0.023 -7.712 -7.992 -8.387 -3.996 -3.843 -3.774 -0.135 -2.628 -4.256 3.333 -3.380 -3.810 0.206 -4.125 -1.785 0.934 -4.098 -0.327 -2.671 ML 160 158 6 163 6 1 1 42 61 -6.839 -7.185 -0.729 -1.594 -7.035 -4.564 -0.170 0.624 -0.881 0.038 MR 161 158 6 163 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 27 52 U A - - MP 165 164 6 169 6 2 2 41 60 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.922 -3.737 -3.789 -0.052 -2.791 -4.377 1.531 -3.467 -3.797 0.246 -4.183 -1.644 3.182 -4.083 -0.473 -2.646 ML 166 164 6 169 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 28 51 U A - - MP 171 170 6 175 6 2 2 39 58 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.922 -3.737 -3.789 -0.052 -2.791 -4.377 1.531 -3.467 -3.797 0.246 -4.183 -1.644 3.182 -4.083 -0.473 -2.646 ML 172 170 6 175 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 29 50 U A - - MP 177 176 6 181 6 2 2 37 56 -9.054 -8.994 -0.022 -7.770 -8.050 -8.445 -3.922 -3.737 -3.789 -0.052 -2.791 -4.377 1.531 -3.467 -3.797 0.246 -4.183 -1.644 3.182 -4.083 -0.473 -2.646 ML 178 176 6 181 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 36 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 30 49 U A - - MP 183 182 6 187 4 2 2 35 54 -6.805 -7.012 -0.059 -5.426 -3.922 -3.737 -3.789 -0.052 -2.791 -4.377 1.531 -3.467 -3.797 0.246 -4.183 -1.644 3.182 -4.083 -0.473 -2.646 ML 184 182 6 187 4 1 1 35 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 186 182 6 187 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 187 187 5 187 4 1 1 37 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 188 188 6 188 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 31 - C - - - ML 189 188 6 191 3 1 1 32 52 -7.832 -0.023 -6.486 -1.425 1.526 -2.236 -0.904 D 190 188 6 191 3 0 0 31 51 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 32 - A - - - ML 192 191 3 194 3 1 1 31 51 -7.832 -0.023 -6.486 1.655 -2.106 -1.765 -1.624 D 193 191 3 194 3 0 0 30 49 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - U - - - ML 195 194 3 197 3 1 1 30 49 -7.832 -0.023 -6.486 -1.245 -1.285 -1.965 1.542 D 196 194 3 197 3 0 0 29 48 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - A - - - ML 198 197 3 200 3 1 1 29 48 -7.832 -0.023 -6.486 1.655 -2.106 -1.765 -1.624 D 199 197 3 200 3 0 0 28 47 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 35 - C - - - ML 201 200 3 203 3 1 1 28 47 -7.832 -0.023 -6.486 -1.425 1.526 -2.236 -0.904 D 202 200 3 203 3 0 0 27 46 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 36 - U - - - ML 204 203 3 206 3 1 1 27 46 -7.832 -0.023 -6.486 -0.072 -0.804 -1.181 1.025 D 205 203 3 206 3 0 0 26 45 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 37 - c - - - ML 207 206 3 209 3 1 1 26 45 -7.832 -0.023 -6.486 -0.767 0.977 -1.561 0.144 D 208 206 3 209 3 0 0 25 44 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 38 - A - - - ML 210 209 3 212 3 1 1 25 44 -7.832 -0.023 -6.486 1.655 -2.106 -1.765 -1.624 D 211 209 3 212 3 0 0 24 43 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 39 - U - - - ML 213 212 3 215 3 1 1 24 42 -7.832 -0.023 -6.486 -1.245 -1.285 -1.965 1.542 D 214 212 3 215 3 0 0 22 41 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 40 - U - - - ML 216 215 3 218 3 1 1 22 41 -7.832 -0.023 -6.486 -1.245 -1.285 -1.965 1.542 D 217 215 3 218 3 0 0 21 40 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 41 - U - - - ML 219 218 3 221 3 1 1 21 40 -7.832 -0.023 -6.486 -1.245 -1.285 -1.965 1.542 D 220 218 3 221 3 0 0 20 39 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 42 - A - - - ML 222 221 3 224 3 1 1 20 39 -7.832 -0.023 -6.486 1.655 -2.106 -1.765 -1.624 D 223 221 3 224 3 0 0 19 38 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 43 - A - - - ML 225 224 3 227 3 1 1 19 38 -7.832 -0.023 -6.486 1.655 -2.106 -1.765 -1.624 D 226 224 3 227 3 0 0 18 37 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 44 - A - - - ML 228 227 3 230 3 1 1 18 36 -7.832 -0.023 -6.486 1.079 -1.046 -1.079 -0.106 D 229 227 3 230 3 0 0 17 36 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 45 - A - - - ML 231 230 3 233 3 1 1 16 35 -7.832 -0.023 -6.486 1.655 -2.106 -1.765 -1.624 D 232 230 3 233 3 0 0 16 34 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 46 - U - - - ML 234 233 3 236 3 1 1 15 33 -7.832 -0.023 -6.486 -1.245 -1.285 -1.965 1.542 D 235 233 3 236 3 0 0 15 33 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 47 - C - - - ML 237 236 3 239 3 1 1 13 32 -7.832 -0.179 -3.155 -1.425 1.526 -2.236 -0.904 D 238 236 3 239 3 0 0 13 32 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 48 - A - - - ML 240 239 3 242 2 1 1 1 1 * 0.000 1.562 -1.806 -1.494 -1.298 D 241 239 3 242 2 0 0 0 0 * 0.000 IL 242 242 3 242 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 243 242 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SpR14_sRNA ACC RF02445 DESC Streptococcus sRNA SpR14 LENG 80 MAXL 171 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 04:39:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02445/CM NSEQ 5 EFFN 2.192383 CKSUM 1311438670 STATS LOCAL MSV -8.6560 0.71876 STATS LOCAL VITERBI -9.4897 0.71876 STATS LOCAL FORWARD -3.2612 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.09395 1.67105 1.78279 1.17477 1.38629 1.38629 1.38629 1.38629 0.16504 3.84075 2.03512 1.46634 0.26236 0.00000 * 1 2.32159 2.33587 2.82499 0.29323 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04942 3.72513 3.72513 1.46634 0.26236 2.08987 0.13205 2 2.32159 2.33587 2.82499 0.29323 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04942 3.72513 3.72513 1.46634 0.26236 2.08987 0.13205 3 1.66047 1.76771 0.75624 1.77314 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.04942 3.72513 3.72513 1.46634 0.26236 2.08987 0.13205 4 0.65988 2.10403 2.14281 1.41142 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.04942 3.72513 3.72513 1.46634 0.26236 0.28423 1.39672 5 2.10724 0.59202 2.68008 1.35999 5 C - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 6 0.55936 2.22961 2.25906 1.53060 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 7 1.15546 1.53704 2.11112 1.05278 7 u - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 8 1.04657 1.63117 1.25084 1.79037 8 a - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 9 1.23251 2.07993 0.97093 1.58587 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 10 0.37348 2.68407 1.76890 2.61923 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.15671 3.84075 2.09091 1.46634 0.26236 1.09861 0.40547 11 1.30747 2.49384 0.59605 2.34423 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04902 3.73306 3.73306 1.46634 0.26236 2.04817 0.13808 12 1.69264 1.05370 1.75161 1.22476 12 c - - < 1.38629 1.38629 1.38629 1.38629 0.19431 1.87944 3.73306 0.80379 0.59353 2.04817 0.13808 13 1.71104 0.84504 1.68553 1.58750 15 c - - - 1.38629 1.38629 1.38629 1.38629 0.04902 3.73306 3.73306 1.46634 0.26236 2.04817 0.13808 14 0.21467 2.94265 2.69633 2.61708 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04902 3.73306 3.73306 1.46634 0.26236 2.04817 0.13808 15 0.21467 2.94265 2.69633 2.61708 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.04902 3.73306 3.73306 1.46634 0.26236 0.29833 1.35502 16 0.16778 3.16614 2.89743 2.86251 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 17 0.37378 2.68305 1.76874 2.61772 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 18 0.37350 2.68399 1.76889 2.61912 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 19 0.71293 2.04434 1.46827 1.89709 21 a - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 20 2.88891 1.84338 2.62992 0.33688 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 21 2.88836 1.84336 2.62969 0.33695 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 22 3.12047 0.25929 2.88677 2.05175 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 23 2.64471 1.47777 2.41616 0.49173 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 24 2.77062 0.35181 2.58438 1.84185 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 25 2.82702 1.84060 2.60316 0.34524 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 26 2.85558 1.84190 2.61562 0.34131 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 27 2.86981 1.84254 2.62176 0.33939 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 28 2.87685 1.84285 2.62478 0.33846 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 29 2.75759 0.22017 3.33256 2.31796 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 30 0.16778 3.16614 2.89743 2.86251 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 31 2.54164 2.51730 3.05615 0.23128 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 32 0.16778 3.16614 2.89743 2.86251 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 33 2.75759 0.22017 3.33256 2.31796 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 34 1.48094 2.04816 2.32845 0.60485 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 35 2.09107 0.61135 2.66302 1.33146 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 36 0.16778 3.16614 2.89743 2.86251 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 37 2.54164 2.51730 3.05615 0.23128 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 38 2.54164 2.51730 3.05615 0.23128 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 39 2.54164 2.51730 3.05615 0.23128 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 40 0.16778 3.16614 2.89743 2.86251 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 41 0.16778 3.16614 2.89743 2.86251 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 42 0.57881 2.21024 2.24588 1.49643 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 43 0.16778 3.16614 2.89743 2.86251 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 44 2.54164 2.51730 3.05615 0.23128 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 45 2.75759 0.22017 3.33256 2.31796 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.17265 3.84075 1.98714 1.46634 0.26236 1.09861 0.40547 46 0.22230 2.91143 2.66826 2.58294 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04979 3.71790 3.71790 1.46634 0.26236 0.27257 1.43304 47 0.38314 2.80979 1.68006 2.63523 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 48 0.38313 2.80983 1.68006 2.63528 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 49 0.38311 2.80993 1.68007 2.63540 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 50 0.38306 2.81012 1.68008 2.63564 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.17265 3.84075 1.98714 1.46634 0.26236 1.09861 0.40547 51 2.14177 2.76883 0.29088 2.62818 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.04979 3.71790 3.71790 1.46634 0.26236 0.27257 1.43304 52 1.43810 2.57744 0.51583 2.41187 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 53 2.32832 3.05429 0.22413 2.87936 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 54 0.38244 2.81272 1.68029 2.63888 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 55 0.38228 2.81336 1.68034 2.63969 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 56 1.73932 1.67761 1.84897 0.73368 58 u - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 57 2.85279 2.05513 2.49874 0.31190 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 58 2.85581 2.05545 2.49983 0.31149 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 59 0.16778 3.16614 2.89743 2.86251 61 A - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 60 2.54164 2.51730 3.05615 0.23128 62 U - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 61 2.75759 0.22017 3.33256 2.31796 63 C - - - 1.38629 1.38629 1.38629 1.38629 0.17265 1.98714 3.84075 0.80379 0.59353 1.09861 0.40547 62 1.66460 1.92599 0.79489 1.54472 66 g - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 63 2.50499 1.56915 2.29200 0.49588 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 64 2.85031 2.05486 2.49783 0.31225 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 65 2.15581 1.51399 1.88582 0.66854 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 66 2.01618 1.63197 1.74193 0.70096 70 u - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 67 0.16778 3.16614 2.89743 2.86251 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 68 2.75759 0.22017 3.33256 2.31796 72 C - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 69 2.62462 3.49185 0.16188 3.06733 73 G - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 70 2.62462 3.49185 0.16188 3.06733 74 G - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 71 0.16778 3.16614 2.89743 2.86251 75 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 72 1.95112 0.89153 2.50655 1.00428 76 c - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 73 0.16778 3.16614 2.89743 2.86251 77 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 74 2.54164 2.51730 3.05615 0.23128 78 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 75 1.49270 2.68658 0.50273 2.28039 79 G - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 76 2.04458 1.61815 2.56359 0.51874 80 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 77 0.16778 3.16614 2.89743 2.86251 81 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 78 2.54164 2.51730 3.05615 0.23128 82 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 79 0.57881 2.21024 2.24588 1.49643 83 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84075 3.84075 1.46634 0.26236 1.09861 0.40547 80 1.48094 2.04816 2.32845 0.60485 84 U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 3.81904 * 1.46634 0.26236 0.00000 * //