INFERNAL1/a [1.1.4 | Dec 2020] NAME DENV_SLA ACC RF02340 DESC Dengue virus SLA STATES 225 NODES 52 CLEN 72 W 94 ALPH RNA RF no CONS yes MAP yes DATE Mon Jan 27 11:52:40 2025 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /homes/nancyontiveros/3D_families/3D_release15.1/RF02340/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 3.680420 CKSUM 4005222079 NULL 0.000 0.000 0.000 0.000 GA 50.50 TC 50.50 NC 40.10 EFP7GF -11.1304 0.71903 ECMLC 0.63803 -5.03057 3.73285 1600000 321697 0.003730 ECMGC 0.44714 -13.42100 -1.44689 1600000 84594 0.004728 ECMLI 0.60236 -4.23865 4.78940 1600000 276021 0.004347 ECMGI 0.46533 -9.30682 1.46054 1600000 59986 0.006668 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 0 1 94 121 -9.358 -9.297 -0.085 -4.367 -8.354 -8.749 IL 1 1 2 1 6 1 24 96 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 24 95 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 2 80 A U - - MP 3 2 3 7 6 3 29 94 121 -9.292 -9.231 -0.019 -8.008 -8.288 -8.683 -4.585 -3.441 -4.514 3.674 -5.295 -6.461 -0.940 -4.500 -4.410 0.215 -4.995 -0.811 -1.351 -5.491 -2.877 -3.327 ML 4 2 3 7 6 1 22 92 119 -7.022 -7.368 -2.083 -0.502 -7.218 -4.748 1.185 -1.082 -0.827 -0.536 MR 5 2 3 7 6 1 21 92 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 17 90 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 23 94 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 24 93 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 3 79 g u - - MP 9 8 6 13 6 3 28 92 119 -9.292 -9.231 -0.019 -8.008 -8.288 -8.683 -3.164 -1.737 -3.649 0.865 -4.129 -3.751 0.131 -3.623 -3.050 2.016 -0.334 2.588 -0.257 -3.579 -1.760 -2.364 ML 10 8 6 13 6 1 22 90 117 -7.022 -7.368 -2.083 -0.502 -7.218 -4.748 -0.214 -1.155 1.010 -0.568 MR 11 8 6 13 6 1 21 90 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 16 88 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 23 92 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 23 91 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 4 78 u g - - MP 15 14 6 19 6 3 28 90 117 -9.292 -9.231 -0.019 -8.008 -8.288 -8.683 -3.185 -3.286 0.116 0.046 -2.543 -3.884 1.996 -3.149 -3.258 0.140 -3.718 -1.624 0.894 -3.422 2.477 -2.284 ML 16 14 6 19 6 1 22 89 115 -7.022 -7.368 -0.620 -1.777 -7.218 -4.748 -0.342 -0.592 -0.979 1.029 MR 17 14 6 19 6 1 21 88 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 16 86 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 22 90 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 23 89 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 5 77 u a - - MP 21 20 6 25 6 3 27 88 115 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -0.583 -2.419 -2.549 1.180 -2.339 -3.398 1.478 -2.746 -2.590 1.267 -3.141 -0.701 2.293 -2.694 -0.305 -1.674 ML 22 20 6 25 6 1 20 87 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 20 86 113 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 16 84 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 22 88 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 22 87 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 76 G C - - MP 27 26 6 31 6 3 26 86 113 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -5.793 -3.611 -6.077 -0.545 -6.686 -5.082 -1.791 -6.334 -4.949 3.814 -5.226 -1.369 -2.155 -5.137 -3.899 -4.939 ML 28 26 6 31 6 1 20 85 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 19 84 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 15 82 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 22 86 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 22 85 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 7 75 U A - - MP 33 32 6 37 6 3 25 84 111 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -4.690 -4.684 -4.464 -0.915 -3.241 -4.940 1.104 -4.010 -4.482 -0.751 -4.821 -2.695 3.413 -4.782 0.465 -3.279 ML 34 32 6 37 6 1 19 83 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 19 82 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 15 80 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 21 84 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 21 83 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 8 74 U A - - MP 39 38 6 43 6 3 24 82 109 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -4.792 -4.785 -4.557 -1.012 -3.320 -5.024 1.025 -4.094 -4.575 -0.847 -4.909 -2.794 3.466 -4.878 0.274 -3.353 ML 40 38 6 43 6 1 19 81 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 18 81 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 14 78 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 20 82 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 20 81 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 9 73 a u - - MP 45 44 6 49 6 3 22 80 107 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -3.176 -2.697 -3.221 2.133 -3.057 -4.001 1.508 -3.397 -3.322 2.009 -3.795 -0.567 1.223 -3.302 -0.751 -2.210 ML 46 44 6 49 6 1 18 79 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 17 79 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 14 77 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 19 80 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 19 80 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 10 72 G C - - MP 51 50 6 55 4 2 20 78 105 -7.530 -7.737 -0.035 -6.151 -4.297 -2.912 -4.278 1.754 -5.162 -4.826 -0.448 -4.699 -4.241 3.294 -4.617 -0.515 -0.725 -4.224 -2.447 -3.163 ML 52 50 6 55 4 1 17 78 104 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 15 77 104 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 14 76 103 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 19 79 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 18 78 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - U - - - ML 57 56 6 59 3 1 19 76 103 -8.872 -0.013 -7.190 -1.639 -0.838 -2.393 1.550 D 58 56 6 59 3 0 13 75 101 -5.620 -0.734 -1.403 IL 59 59 3 59 3 1 17 77 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 71 - u - - MR 60 59 3 62 3 1 19 75 102 -8.872 -0.013 -7.190 -0.044 -1.035 -0.364 0.820 D 61 59 3 62 3 0 12 73 100 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 16 76 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 70 - U - - MR 63 62 3 65 5 1 18 74 101 -7.582 -0.028 -7.397 -7.609 -8.501 -2.527 -2.351 -3.297 1.819 D 64 62 3 65 5 0 12 73 99 -5.352 -0.707 -2.978 -4.409 -2.404 IR 65 65 3 65 5 1 15 74 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 69 C G - - MP 66 65 3 70 6 2 19 73 100 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -5.771 -5.780 -5.239 -1.949 -3.745 -5.489 3.802 -4.680 -5.359 -1.832 -5.458 -3.776 -0.390 -5.755 -1.511 -4.168 ML 67 65 3 70 6 1 13 72 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 3 70 6 1 13 71 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 3 70 6 0 9 69 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 14 73 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 15 72 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 13 68 U A - - MP 72 71 6 76 6 2 18 71 98 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -5.651 -5.493 -5.315 -1.718 -3.997 -5.741 0.336 -4.776 -5.311 -1.620 -5.613 -3.356 3.741 -5.724 -1.639 -3.921 ML 73 71 6 76 6 1 13 70 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 13 69 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 9 67 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 14 71 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 14 70 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 14 67 G C - - MP 78 77 6 82 6 2 17 69 96 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -4.098 -2.821 -4.082 2.186 -4.929 -4.840 -0.289 -4.471 -4.097 3.058 -4.508 -0.398 -0.563 -4.140 -2.270 -2.960 ML 79 77 6 82 6 1 13 68 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 12 67 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 9 65 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 14 69 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 14 68 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 15 66 c g - - MP 84 83 6 88 6 2 15 67 94 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -3.981 -3.935 -3.892 -0.122 -2.832 -4.511 2.636 -3.535 -3.878 0.053 -4.297 -1.875 2.365 -4.143 0.688 -2.739 ML 85 83 6 88 6 1 12 66 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 12 65 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 8 63 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 13 67 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 13 66 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 16 65 G C - - MP 90 89 6 94 6 2 14 65 92 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -3.970 -2.827 -3.994 0.625 -4.610 -4.523 -0.241 -4.423 0.081 3.266 -4.385 0.443 -0.496 -3.926 -2.145 -2.969 ML 91 89 6 94 6 1 11 64 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 10 64 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 8 62 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 12 65 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 12 64 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 17 64 u a - - MP 96 95 6 100 4 2 12 63 90 -7.530 -7.737 -0.035 -6.151 -2.735 -2.834 -2.850 0.450 -2.430 -3.633 1.498 -2.938 -2.889 0.531 -3.412 -1.184 2.603 0.132 0.528 -1.954 ML 97 95 6 100 4 1 10 63 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 9 62 89 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 8 61 88 -4.568 -4.250 -2.265 -0.520 IL 100 100 5 100 4 1 11 64 91 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 11 63 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - G - - - ML 102 101 6 104 3 1 10 61 88 -8.512 -0.014 -7.166 -2.679 -4.037 1.883 -3.408 D 103 101 6 104 3 0 7 59 86 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 10 62 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - g - - - ML 105 104 3 107 3 1 9 60 87 -8.512 -0.014 -7.166 0.613 -2.001 0.889 -1.442 D 106 104 3 107 3 0 7 59 85 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 9 61 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - A - - - ML 108 107 3 110 3 1 8 59 86 -8.872 -0.013 -7.190 1.592 -2.322 -0.950 -1.901 D 109 107 3 110 3 0 6 58 85 -5.620 -0.734 -1.403 IL 110 110 3 110 3 1 8 60 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 63 - A - - MR 111 110 3 113 2 1 7 58 85 -8.993 -0.003 1.466 -2.149 -0.513 -1.686 D 112 110 3 113 2 0 6 57 84 -4.432 -0.068 IR 113 113 3 113 2 1 7 59 85 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 23 ] - - - - - - B 114 113 3 115 189 0 6 57 84 [ BEGL 24 ] - - - - - - S 115 114 1 116 4 0 0 46 72 -0.036 -7.157 -6.564 -7.204 [ MATP 25 ] 21 49 C G - - MP 116 115 1 120 6 2 2 46 72 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -4.601 -4.574 -4.309 -0.696 -2.975 -4.740 3.331 -3.772 -4.324 -0.519 -4.631 -2.511 1.670 -4.655 -0.627 -3.138 ML 117 115 1 120 6 1 1 44 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 1 120 6 1 1 44 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 1 120 6 0 0 41 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 45 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 45 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 48 C G - - MP 122 121 6 126 6 2 2 44 70 -4.007 -9.297 -0.109 -8.074 -8.354 -8.749 -4.337 -4.304 -4.139 -0.449 -2.914 -4.648 3.194 -3.674 -4.140 -0.272 -4.495 -2.241 1.448 -4.440 0.733 -2.972 ML 123 121 6 126 6 1 1 42 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 42 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 0 39 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 43 69 -3.352 -3.615 -0.395 -5.270 -6.047 -5.707 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 43 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 24 47 g c - - MP 128 127 6 132 6 2 2 42 68 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -2.839 -2.362 -2.935 0.989 -3.088 -3.702 0.807 -3.282 0.393 2.499 -3.515 0.655 0.994 -3.000 -0.959 -2.028 ML 129 127 6 132 6 1 1 40 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 40 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 38 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 41 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 41 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 25 46 a u - - MP 134 133 6 138 4 2 2 40 66 -7.530 -2.538 -0.307 -6.151 -2.670 -2.531 0.739 2.334 -2.680 -3.645 1.486 -3.021 -2.851 1.142 -3.381 -0.660 0.761 -2.959 -0.651 -1.919 ML 135 133 6 138 4 1 1 38 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 4 1 1 38 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 137 133 6 138 4 0 0 37 63 -4.568 -4.250 -2.265 -0.520 IL 138 138 5 138 4 1 1 40 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 139 139 6 139 3 1 1 40 67 -0.998 -1.073 -5.373 0.000 0.000 0.000 0.000 [ MATL 29 ] 26 - C - - - ML 140 139 6 142 3 1 1 30 48 -8.512 -0.014 -7.166 -1.931 1.551 -2.811 -0.591 D 141 139 6 142 3 0 0 29 48 -6.174 -1.687 -0.566 IL 142 142 3 142 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 27 - A - - - ML 143 142 3 145 3 1 1 29 47 -8.512 -0.014 -7.166 1.113 -1.328 -1.449 0.101 D 144 142 3 145 3 0 0 28 46 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 28 - A - - - ML 146 145 3 148 3 1 1 28 46 -8.872 -0.013 -7.190 1.235 -1.992 0.049 -1.474 D 147 145 3 148 3 0 0 26 45 -5.620 -0.734 -1.403 IL 148 148 3 148 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 42 - u - - MR 149 148 3 151 3 1 1 27 45 -8.872 -0.013 -7.190 0.185 -0.598 -1.327 0.851 D 150 148 3 151 3 0 0 25 44 -6.390 -1.568 -0.620 IR 151 151 3 151 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 41 - a - - MR 152 151 3 154 3 1 1 26 44 -8.872 -0.167 -3.221 0.500 -1.021 -0.411 0.424 D 153 151 3 154 3 0 0 24 43 -6.390 -1.568 -0.620 IR 154 154 3 154 3 1 1 27 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 40 - g - - MR 155 154 3 157 5 1 1 25 43 -7.437 -0.031 -7.252 -7.464 -8.356 0.475 -1.859 0.945 -1.288 D 156 154 3 157 5 0 0 23 42 -6.093 -0.381 -3.719 -5.150 -3.145 IR 157 157 3 157 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 39 g c - - MP 158 157 3 162 6 2 2 24 42 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -3.627 -2.653 -3.575 1.682 -3.868 -4.268 1.266 -3.934 -3.776 2.823 -4.158 -0.353 0.304 -3.560 -1.351 -2.527 ML 159 157 3 162 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 3 162 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 3 162 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 30 38 g c - - MP 164 163 6 168 6 2 2 22 40 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -2.970 -2.460 -3.026 1.647 -3.113 -3.792 1.282 -0.765 -3.173 2.532 -3.638 -0.377 0.669 -3.076 -0.888 -2.088 ML 165 163 6 168 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 6 168 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 31 37 a u - - MP 170 169 6 174 4 2 2 20 38 -7.530 -7.737 -0.035 -6.151 -3.359 -3.112 -3.398 2.453 -2.876 -4.168 1.647 -3.372 -3.427 0.927 -3.908 -1.051 1.729 -3.572 -0.603 -2.361 ML 171 169 6 174 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 173 169 6 174 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 174 174 5 174 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 175 175 6 175 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - C - - - ML 176 175 6 178 3 1 1 16 34 -8.512 -0.014 -7.166 -1.329 1.072 -2.201 0.358 D 177 175 6 178 3 0 0 16 34 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - A - - - ML 179 178 3 181 3 1 1 15 33 -3.212 -0.176 -7.166 1.639 -2.140 -2.094 -1.240 D 180 178 3 181 3 0 0 13 32 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 15 33 -1.882 -0.542 -4.582 0.000 0.000 0.000 0.000 [ MATL 40 ] 35 - G - - - ML 182 181 3 184 3 1 1 13 31 -8.512 -0.014 -7.166 -0.238 -1.251 1.191 -1.158 D 183 181 3 184 3 0 0 13 32 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 36 - U - - - ML 185 184 3 187 2 1 1 1 1 * 0.000 -1.369 -1.516 -1.438 1.533 D 186 184 3 187 2 0 0 0 0 * 0.000 IL 187 187 3 187 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 188 187 3 -1 0 0 0 0 0 [ BEGR 43 ] - - - - - - S 189 114 1 190 5 0 0 26 44 -7.582 -0.028 -7.397 -7.609 -8.501 IL 190 190 2 190 5 1 1 27 46 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 50 62 a u - - MP 191 190 2 195 6 2 2 26 44 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 0.382 -2.510 -3.142 2.632 -3.401 -4.108 0.402 -3.450 -3.176 1.930 -3.706 -0.334 0.184 -3.338 -1.317 -2.193 ML 192 190 2 195 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 2 195 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 2 195 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 51 61 a u - - MP 197 196 6 201 6 2 2 24 42 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -3.444 -2.710 -3.563 2.941 -4.005 -4.738 -0.067 -3.806 -3.507 1.150 -4.059 1.148 -0.280 -3.900 -1.837 0.153 ML 198 196 6 201 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 52 60 g c - - MP 203 202 6 207 6 2 2 22 40 -9.358 -9.297 -0.018 -8.074 -8.354 -8.749 -3.148 -2.561 -3.187 0.872 -3.287 -0.271 0.803 -3.528 -3.334 2.791 -3.772 -0.477 1.266 -3.200 -1.049 -2.259 ML 204 202 6 207 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 206 202 6 207 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 207 207 5 207 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 208 208 6 208 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 53 59 c g - - MP 209 208 6 213 4 2 2 20 38 -7.530 -7.737 -0.035 -6.151 -0.636 -1.791 -1.958 0.995 -1.900 -2.730 2.150 -2.254 -0.971 0.871 -0.507 -0.390 1.221 -2.077 -0.096 -1.184 ML 210 208 6 213 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 211 208 6 213 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 212 208 6 213 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 213 213 5 213 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 214 214 6 214 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 54 - u - - - ML 215 214 6 217 3 1 1 17 35 -2.626 -0.858 -1.805 0.416 -1.011 -0.642 0.612 D 216 214 6 217 3 0 0 14 32 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 18 36 -1.510 -0.696 -4.996 0.000 0.000 0.000 0.000 [ MATL 49 ] 57 - A - - - ML 218 217 3 220 3 1 1 13 31 -8.040 -0.020 -6.694 1.259 -1.569 -0.354 -1.036 D 219 217 3 220 3 0 0 12 30 -8.430 -0.225 -2.821 IL 220 220 3 220 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 58 - a - - - ML 221 220 3 223 2 1 1 1 1 * 0.000 0.728 -0.573 -1.231 0.317 D 222 220 3 223 2 0 0 0 0 * 0.000 IL 223 223 3 223 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 224 223 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME DENV_SLA ACC RF02340 DESC Dengue virus SLA LENG 72 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jan 27 11:52:40 2025 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /homes/nancyontiveros/3D_families/3D_release15.1/RF02340/CM NSEQ 15 EFFN 7.247314 CKSUM 4005222079 STATS LOCAL MSV -8.4076 0.71903 STATS LOCAL VITERBI -8.8187 0.71903 STATS LOCAL FORWARD -3.3781 0.71903 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.32969 1.60611 1.33906 1.29945 1.38629 1.38629 1.38629 1.38629 0.21180 1.71492 4.51921 0.11699 2.20361 0.00000 * 1 0.09345 4.07889 2.97375 3.85487 2 A - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 2 2.38466 3.43480 0.17515 3.31537 3 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 3 2.04221 1.44704 3.41461 0.50733 4 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 4 1.53673 1.87094 1.74742 0.78369 5 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 5 3.50665 4.49172 0.05446 4.43911 6 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 6 3.95655 2.42615 3.82914 0.13838 7 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 7 4.05637 2.51951 3.93030 0.12494 8 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 8 1.02990 1.73061 1.26275 1.69877 9 a - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 9 1.41651 3.49446 0.36924 3.32926 10 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 10 3.17201 2.10792 3.69480 0.20858 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 11 4.77516 0.05001 4.69871 3.46622 12 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 12 4.86335 3.54423 4.80024 0.04588 13 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 13 1.05890 3.42252 0.54217 3.24304 14 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 14 3.20383 0.85655 2.97446 0.72631 15 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 15 2.71462 3.61928 0.13292 3.46001 16 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 16 3.09727 2.07592 2.94357 0.25269 17 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 17 4.01765 5.03744 0.03592 4.52842 18 G - - , 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 18 0.89954 3.43083 0.66169 3.10321 19 G - - , 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 19 0.19785 3.64079 2.10686 3.45276 20 A - - , 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 20 3.74656 0.31971 3.55835 1.50709 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 21 3.52121 0.40665 3.31222 1.31631 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.17255 1.91337 4.51921 0.14165 2.02437 1.09861 0.40547 22 2.17390 2.62941 0.39508 1.96243 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 23 0.40578 1.80567 2.41424 2.52893 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 24 3.42606 0.20401 4.04958 2.00542 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 25 0.49229 2.73104 2.82896 1.32972 27 A - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 26 0.42798 3.47955 1.28449 3.20487 28 A - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 27 1.44097 1.88738 0.63302 2.51519 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 28 1.43368 1.67876 0.74449 2.30270 30 g - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 29 0.73309 1.72465 2.54022 1.33754 31 a - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 30 2.88282 0.51209 3.55383 1.15148 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 31 0.15902 3.41407 3.44535 2.49835 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.15373 2.02799 4.51921 0.15811 1.92249 1.09861 0.40547 32 1.70027 2.39348 0.41903 2.68286 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 33 2.96172 2.97035 2.55383 0.19943 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 34 1.43575 2.72539 1.60907 0.70023 37 u - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 35 2.55583 0.81348 1.86231 1.12780 38 c - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 36 2.78418 0.69259 1.79672 1.30158 39 C - - > 1.38629 1.38629 1.38629 1.38629 0.15373 4.51921 2.02799 1.46634 0.26236 1.09861 0.40547 37 1.01561 3.25725 0.60721 2.91038 40 G - - - 1.38629 1.38629 1.38629 1.38629 0.02510 4.39058 4.39058 1.46634 0.26236 0.15325 1.95132 38 0.99489 2.34056 1.68333 1.05496 41 a - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 39 1.24507 1.91068 2.58277 0.71635 42 u - - - 1.38629 1.38629 1.38629 1.38629 0.23155 1.63066 4.51921 0.93402 0.49918 1.09861 0.40547 40 2.77146 2.64778 0.99716 0.69777 46 u - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 41 1.37330 0.85274 2.43813 1.45604 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 42 1.83194 3.46829 0.26059 3.26664 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 43 1.60707 3.69736 0.29610 3.47293 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 44 0.37364 3.46284 1.42195 3.23926 50 A - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 45 0.46895 3.96846 1.43982 2.13312 51 A - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 46 2.34656 1.85755 0.57773 1.67623 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 47 1.74610 0.92695 1.43719 1.64926 53 c - - < 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 48 1.05870 2.34236 1.88571 0.90320 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.74373 1.63066 1.11212 0.45671 1.00339 1.09861 0.40547 49 0.38565 2.95256 1.62940 2.63468 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03248 4.13654 4.13654 1.46634 0.26236 0.06417 2.77812 50 0.79559 1.86453 2.50601 1.16436 58 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 51 1.46674 2.16460 0.69345 1.86639 59 g - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 52 1.77701 0.48300 2.41231 2.08491 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 53 3.86888 2.71944 3.74428 0.11704 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 54 1.82286 1.55115 3.25420 0.53133 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 55 0.27682 3.54559 1.73188 3.32409 63 A - - , 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 56 0.59806 1.80027 1.47399 2.88496 64 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 57 2.09962 0.36975 3.43636 1.86814 65 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 58 0.97454 3.14637 0.63861 2.96420 66 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 59 3.48452 0.59098 3.22855 0.97834 67 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 60 0.05273 5.01751 3.36643 4.58220 68 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 61 3.75706 4.87827 0.04178 4.60909 69 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 62 3.98570 3.75423 4.53474 0.05417 70 U - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 63 1.47628 2.37720 1.61875 0.73281 71 u - - - 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 64 3.55879 0.40556 3.30665 1.31571 72 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 65 1.86117 1.36001 1.60508 0.94939 73 u - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 66 0.21586 4.09283 1.86006 3.82616 74 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 67 0.25180 3.99960 1.71185 3.74046 75 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 68 4.61150 0.06381 4.43448 3.21846 76 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02204 4.51921 4.51921 1.46634 0.26236 1.09861 0.40547 69 0.73798 1.88944 1.69323 1.67750 77 a - - ) 1.38629 1.38629 1.38629 1.38629 0.13088 4.51921 2.19122 1.46634 0.26236 1.09861 0.40547 70 2.68178 3.62929 0.13820 3.37850 78 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02454 4.41287 4.41287 1.46634 0.26236 2.50613 0.08510 71 3.60656 1.51251 2.20695 0.44244 79 U - - ) 1.38629 1.38629 1.38629 1.38629 0.02454 4.41287 4.41287 1.46634 0.26236 2.50613 0.08510 72 4.49332 3.46026 4.19897 0.05934 80 U - - ) 1.38629 1.38629 1.38629 1.38629 0.01234 4.40067 * 1.46634 0.26236 0.00000 * //