INFERNAL1/a [1.1.5 | Sep 2023] NAME Hammerhead_HH9 ACC RF02275 DESC Hammerhead ribozyme HH9 STATES 240 NODES 65 CLEN 77 W 100 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 17:17:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02275/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 33 EFFN 1.558960 CKSUM 796486396 NULL 0.000 0.000 0.000 0.000 GA 52.00 TC 52.00 NC 51.90 EFP7GF -8.2862 0.71890 ECMLC 0.71069 -4.96957 2.60651 1600000 261538 0.004588 ECMGC 0.42525 -15.64774 -3.54952 1600000 68615 0.005830 ECMLI 0.74079 -2.62861 4.02496 1600000 165869 0.007235 ECMGI 0.50250 -9.87642 -0.26039 1600000 50189 0.007970 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 100 130 -6.788 -6.995 -0.318 -2.468 IL 1 1 2 1 4 4 30 103 133 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 3 29 102 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 3 28 100 130 -7.591 -0.027 -6.245 -0.216 -0.124 -0.893 0.751 D 4 2 3 5 3 1 26 98 128 -7.316 -2.158 -0.378 IL 5 5 3 5 3 3 29 101 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 2 27 99 129 -7.627 -0.026 -6.281 -0.221 -0.056 -0.874 0.709 D 7 5 3 8 3 1 25 98 128 -7.191 -0.601 -1.582 IL 8 8 3 8 3 2 28 100 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - g - - - ML 9 8 3 11 3 1 26 98 128 -8.217 -0.301 -2.436 0.137 -0.826 0.590 -0.266 D 10 8 3 11 3 0 24 97 127 -5.620 -0.734 -1.403 IL 11 11 3 11 3 2 28 99 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 84 - u - - MR 12 11 3 14 3 3 29 97 127 -7.941 -0.025 -6.259 0.091 -0.362 -0.881 0.691 D 13 11 3 14 3 0 22 95 125 -7.603 -2.780 -0.236 IR 14 14 3 14 3 2 28 98 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 83 - a - - MR 15 14 3 17 3 2 28 96 126 -7.941 -0.025 -6.259 0.188 -0.122 -0.212 0.109 D 16 14 3 17 3 0 22 94 124 -7.603 -1.547 -0.616 IR 17 17 3 17 3 2 27 97 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 82 - a - - MR 18 17 3 20 3 2 28 95 125 -8.042 -0.023 -6.360 0.447 -0.484 -0.094 -0.021 D 19 17 3 20 3 0 21 93 123 -7.286 -2.464 -0.300 IR 20 20 3 20 3 2 26 96 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 81 - u - - MR 21 20 3 23 3 2 27 94 124 -8.042 -0.023 -6.360 0.249 -0.195 -0.557 0.331 D 22 20 3 23 3 0 21 92 122 -7.286 -2.464 -0.300 IR 23 23 3 23 3 1 26 95 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 80 - a - - MR 24 23 3 26 3 2 27 93 123 -8.042 -0.023 -6.360 0.673 -0.512 -0.342 -0.128 D 25 23 3 26 3 0 20 91 121 -7.286 -2.464 -0.300 IR 26 26 3 26 3 1 25 94 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 79 - g - - MR 27 26 3 29 3 2 26 92 122 -8.042 -0.023 -6.360 0.071 -0.699 0.322 0.116 D 28 26 3 29 3 0 20 90 120 -7.286 -2.464 -0.300 IR 29 29 3 29 3 1 25 93 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 78 - a - - MR 30 29 3 32 3 2 25 91 121 -8.042 -0.023 -6.360 0.760 -0.612 -0.511 -0.074 D 31 29 3 32 3 0 20 89 119 -7.286 -2.464 -0.300 IR 32 32 3 32 3 1 24 92 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 77 - a - - MR 33 32 3 35 3 1 25 90 120 -8.042 -0.023 -6.360 0.818 -1.001 -0.064 -0.357 D 34 32 3 35 3 0 19 89 119 -7.286 -0.635 -1.516 IR 35 35 3 35 3 1 23 91 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 76 - u - - MR 36 35 3 38 5 1 24 89 119 -6.965 -0.043 -6.780 -6.992 -7.884 -0.217 -0.752 -0.651 0.933 D 37 35 3 38 5 0 17 88 118 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 21 90 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 4 75 g c - - MP 39 38 3 43 6 2 25 88 118 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -2.552 -2.175 -1.907 1.893 -2.713 -3.452 1.204 -2.960 -2.759 2.118 -3.255 0.327 0.935 -2.730 -0.433 -1.740 ML 40 38 3 43 6 1 19 87 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 19 87 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 15 84 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 21 88 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 21 88 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 5 74 G C - - MP 45 44 6 49 6 2 24 86 116 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -4.235 -2.826 -4.304 0.570 -4.784 -4.528 -0.212 -4.598 -4.017 3.490 -4.395 -0.197 -0.533 -4.120 -2.222 -3.196 ML 46 44 6 49 6 1 19 85 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 18 85 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 15 82 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 20 86 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 20 86 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 6 73 C G - - MP 51 50 6 55 6 2 23 84 114 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 52 50 6 55 6 1 18 83 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 17 83 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 14 80 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 19 84 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 20 84 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 7 72 C G - - MP 57 56 6 61 6 2 21 82 112 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -3.892 -3.802 -2.398 -0.215 -3.043 -4.488 3.440 -3.711 -3.899 0.093 -4.293 -1.844 0.576 -4.087 -0.823 -2.831 ML 58 56 6 61 6 1 18 81 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 16 81 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 14 79 108 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 19 82 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 18 82 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 8 71 g u - - MP 63 62 6 67 4 2 19 80 110 -4.920 -6.995 -0.096 -5.409 -2.683 -1.770 -2.951 1.318 -3.144 -3.533 0.844 -3.086 -2.712 1.762 -1.139 2.161 0.527 -3.050 -0.969 -1.872 ML 64 62 6 67 4 1 17 80 110 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 15 79 109 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 14 78 108 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 18 81 111 -1.815 -2.499 -0.979 -4.984 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 18 80 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - U - - - ML 69 68 6 71 3 1 18 78 108 -7.816 -0.023 -6.470 -1.217 -1.262 -1.935 1.532 D 70 68 6 71 3 0 13 76 106 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 17 79 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - U - - - ML 72 71 3 74 3 1 17 77 107 -7.816 -0.023 -6.470 -1.217 -1.262 -1.935 1.532 D 73 71 3 74 3 0 12 75 105 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 16 78 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 12 - A - - - ML 75 74 3 77 3 1 17 76 106 -7.816 -0.023 -6.470 1.492 -1.717 -1.144 -1.217 D 76 74 3 77 3 0 12 75 104 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 16 77 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 13 - C - - - ML 78 77 3 80 3 1 16 75 105 -8.217 -0.021 -6.534 -1.388 1.513 -2.197 -0.875 D 79 77 3 80 3 0 11 74 104 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 15 76 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 70 - C - - MR 81 80 3 83 3 1 15 74 104 -8.217 -0.021 -6.534 -0.880 1.142 -1.680 -0.094 D 82 80 3 83 3 0 10 72 102 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 14 75 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 69 - A - - MR 84 83 3 86 3 1 15 73 103 -8.217 -0.021 -6.534 1.646 -2.075 -1.737 -1.589 D 85 83 3 86 3 0 9 72 101 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 13 74 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 68 - U - - MR 87 86 3 89 5 1 15 72 102 -6.965 -0.043 -6.780 -6.992 -7.884 -1.217 -1.262 -1.935 1.532 D 88 86 3 89 5 0 8 71 101 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 12 72 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 14 67 C G - - MP 90 89 3 94 6 2 16 71 101 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 91 89 3 94 6 1 10 70 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 10 69 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 6 67 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 11 71 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 12 71 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 15 66 U A - - MP 96 95 6 100 6 2 15 69 99 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -3.892 -3.705 -3.762 -0.023 -2.771 -4.353 1.550 -3.444 -3.770 0.281 -4.158 -1.613 3.163 -4.053 -0.454 -2.622 ML 97 95 6 100 6 1 10 68 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 9 67 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 6 65 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 11 69 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 11 69 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 65 G C - - MP 102 101 6 106 6 2 15 67 97 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -3.835 -2.641 -3.869 1.282 -4.274 -4.410 0.223 -4.151 -3.761 3.257 -4.173 -0.292 -0.107 -3.849 -1.766 -2.768 ML 103 101 6 106 6 1 9 66 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 9 65 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 5 63 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 11 67 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 11 67 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 64 C G - - MP 108 107 6 112 6 2 13 65 95 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 109 107 6 112 6 1 9 64 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 8 64 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 5 61 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 10 65 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 10 65 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 63 A U - - MP 114 113 6 118 6 2 12 63 93 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -3.556 -2.651 -3.590 3.154 -3.814 -4.857 0.472 -3.646 -3.494 1.333 -4.029 -0.168 0.053 -4.083 -1.471 -2.440 ML 115 113 6 118 6 1 8 62 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 7 62 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 5 60 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 9 63 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 9 63 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 62 G C - - MP 120 119 6 124 4 2 10 61 91 -6.788 -6.995 -0.060 -5.409 -4.456 -2.959 -4.533 0.387 -4.829 -4.579 -0.264 -4.752 -4.135 3.561 -4.493 -0.649 -0.658 -4.279 -2.287 -3.414 ML 121 119 6 124 4 1 7 61 91 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 6 60 90 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 5 59 89 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 9 62 92 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 8 61 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - C - - - ML 126 125 6 128 3 1 9 59 89 -7.816 -0.023 -6.470 -1.388 1.513 -2.197 -0.875 D 127 125 6 128 3 0 4 57 87 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 8 60 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - U - - - ML 129 128 3 131 3 1 8 58 88 -7.816 -0.023 -6.470 -1.217 -1.262 -1.935 1.532 D 130 128 3 131 3 0 4 56 86 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 7 59 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - G - - - ML 132 131 3 134 3 1 7 57 87 -7.816 -0.023 -6.470 -1.264 -2.431 1.639 -1.816 D 133 131 3 134 3 0 3 55 85 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 7 58 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - A - - - ML 135 134 3 137 3 1 6 56 86 -7.816 -0.023 -6.470 1.646 -2.075 -1.737 -1.589 D 136 134 3 137 3 0 3 54 84 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 6 57 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - U - - - ML 138 137 3 140 3 1 5 55 85 -7.816 -0.023 -6.470 -1.217 -1.262 -1.935 1.532 D 139 137 3 140 3 0 3 53 83 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 5 56 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 25 - G - - - ML 141 140 3 143 3 1 4 54 84 -7.816 -0.023 -6.470 -1.264 -2.431 1.639 -1.816 D 142 140 3 143 3 0 2 53 82 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 5 55 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - A - - - ML 144 143 3 146 3 1 3 53 83 -8.217 -0.021 -6.534 1.646 -2.075 -1.737 -1.589 D 145 143 3 146 3 0 2 52 82 -5.620 -0.734 -1.403 IL 146 146 3 146 3 1 4 54 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 61 - C - - MR 147 146 3 149 2 1 2 52 82 -8.177 -0.005 -1.388 1.513 -2.197 -0.875 D 148 146 3 149 2 0 2 51 81 -4.432 -0.068 IR 149 149 3 149 2 1 3 53 83 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 39 ] - - - - - - B 150 149 3 151 195 0 1 51 81 [ BEGL 40 ] - - - - - - S 151 150 1 152 4 0 0 28 47 -0.047 -6.755 -6.162 -6.802 [ MATP 41 ] 27 40 G C - - MP 152 151 1 156 6 2 2 28 47 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -4.456 -2.959 -4.533 0.387 -4.829 -4.579 -0.264 -4.752 -4.135 3.561 -4.493 -0.649 -0.658 -4.279 -2.287 -3.414 ML 153 151 1 156 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 1 156 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 1 156 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 28 39 C G - - MP 158 157 6 162 6 2 2 26 45 -9.048 -8.988 -0.028 -6.793 -8.044 -8.439 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 159 157 6 162 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 29 38 U A - - MP 164 163 6 168 6 2 2 24 43 -9.042 -8.981 -0.022 -7.758 -8.038 -8.433 -3.861 -3.673 -3.734 0.007 -2.750 -4.327 1.570 -3.421 -3.743 0.317 -4.132 -1.581 3.143 -4.023 -0.434 -2.597 ML 165 163 6 168 6 1 1 23 42 -6.329 -6.675 -1.201 -1.084 -6.525 -4.055 0.261 -0.365 -0.312 0.287 MR 166 163 6 168 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 30 37 C G - - MP 170 169 6 174 4 2 2 22 41 -6.788 -6.995 -0.060 -5.409 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 171 169 6 174 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 173 169 6 174 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 174 174 5 174 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 175 175 6 175 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 31 - C - - - ML 176 175 6 178 3 1 1 19 38 -7.816 -0.023 -6.470 -1.388 1.513 -2.197 -0.875 D 177 175 6 178 3 0 0 18 37 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 32 - A - - - ML 179 178 3 181 3 1 1 18 36 -7.816 -0.023 -6.470 1.646 -2.075 -1.737 -1.589 D 180 178 3 181 3 0 0 17 36 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 33 - A - - - ML 182 181 3 184 3 1 1 16 35 -7.816 -0.023 -6.470 1.646 -2.075 -1.737 -1.589 D 183 181 3 184 3 0 0 16 34 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 34 - A - - - ML 185 184 3 187 3 1 1 15 33 -7.816 -0.023 -6.470 1.019 -0.928 -0.494 -0.439 D 186 184 3 187 3 0 0 15 33 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 35 - A - - - ML 188 187 3 190 3 1 1 13 32 -7.816 -0.023 -6.470 1.646 -2.075 -1.737 -1.589 D 189 187 3 190 3 0 0 13 32 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 36 - A - - - ML 191 190 3 193 2 1 1 1 1 * 0.000 1.646 -2.075 -1.737 -1.589 D 192 190 3 193 2 0 0 0 0 * 0.000 IL 193 193 3 193 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 194 193 3 -1 0 0 0 0 0 [ BEGR 52 ] - - - - - - S 195 150 1 196 3 0 0 37 67 -7.816 -0.023 -6.470 IL 196 196 2 196 3 1 1 39 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 41 - G - - - ML 197 196 2 199 3 1 1 37 67 -7.816 -0.023 -6.470 -1.264 -2.431 1.639 -1.816 D 198 196 2 199 3 0 0 35 65 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 38 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 42 - A - - - ML 200 199 3 202 3 1 1 36 66 -7.816 -0.023 -6.470 1.646 -2.075 -1.737 -1.589 D 201 199 3 202 3 0 0 34 64 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 37 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 43 - A - - - ML 203 202 3 205 5 1 1 35 65 -6.965 -0.043 -6.780 -6.992 -7.884 1.646 -2.075 -1.737 -1.589 D 204 202 3 205 5 0 0 34 63 -4.959 -0.803 -4.221 -2.596 -2.508 IL 205 205 3 205 5 1 1 35 65 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 44 60 A U - - MP 206 205 3 210 6 2 2 34 64 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -3.556 -2.651 -3.590 3.154 -3.814 -4.857 0.472 -3.646 -3.494 1.333 -4.029 -0.168 0.053 -4.083 -1.471 -2.440 ML 207 205 3 210 6 1 1 32 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 208 205 3 210 6 1 1 32 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 209 205 3 210 6 0 0 30 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 210 210 5 210 6 1 1 34 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 211 211 6 211 5 1 1 33 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 45 59 C G - - MP 212 211 6 216 6 2 2 32 62 -9.048 -8.988 -0.022 -7.764 -8.044 -8.439 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 213 211 6 216 6 1 1 31 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 214 211 6 216 6 1 1 30 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 215 211 6 216 6 0 0 28 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 216 216 5 216 6 1 1 32 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 217 217 6 217 5 1 1 31 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 46 58 C G - - MP 218 217 6 222 4 2 2 30 60 -3.678 -6.995 -0.167 -5.409 -4.254 -4.132 -3.992 -0.393 -2.779 -4.442 3.448 -3.559 -4.033 -0.106 -4.324 -2.076 0.763 -4.342 -0.480 -2.884 ML 219 217 6 222 4 1 1 29 59 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 220 217 6 222 4 1 1 28 58 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 221 217 6 222 4 0 0 27 57 -4.568 -4.250 -2.265 -0.520 IL 222 222 5 222 4 1 1 32 62 -0.891 -3.427 -2.175 -2.771 0.000 0.000 0.000 0.000 IR 223 223 6 223 3 1 1 22 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 51 - u - - - ML 224 223 6 226 3 1 1 18 37 -7.721 -0.024 -6.375 0.207 -0.691 -0.346 0.526 D 225 223 6 226 3 0 0 21 41 -1.491 -2.301 -1.180 IL 226 226 3 226 3 1 1 22 42 -1.337 -0.838 -4.483 0.000 0.000 0.000 0.000 [ MATL 60 ] 54 - a - - - ML 227 226 3 229 3 1 1 16 35 -7.816 -0.023 -6.470 0.797 -1.087 0.058 -0.414 D 228 226 3 229 3 0 0 16 34 -6.174 -1.687 -0.566 IL 229 229 3 229 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 55 - u - - - ML 230 229 3 232 3 1 1 15 33 -7.816 -0.023 -6.470 0.079 -0.333 -1.021 0.729 D 231 229 3 232 3 0 0 15 33 -6.174 -1.687 -0.566 IL 232 232 3 232 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 56 - u - - - ML 233 232 3 235 3 1 1 13 32 -7.816 -0.023 -6.470 -0.277 -0.463 -1.029 0.970 D 234 232 3 235 3 0 0 13 32 -6.174 -1.687 -0.566 IL 235 235 3 235 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 57 - A - - - ML 236 235 3 238 2 1 1 1 1 * 0.000 1.462 -1.665 -1.051 -1.160 D 237 235 3 238 2 0 0 0 0 * 0.000 IL 238 238 3 238 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 239 238 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Hammerhead_HH9 ACC RF02275 DESC Hammerhead ribozyme HH9 LENG 77 MAXL 166 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 6 17:17:09 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02275/CM NSEQ 33 EFFN 2.203491 CKSUM 796486396 STATS LOCAL MSV -8.8992 0.71890 STATS LOCAL VITERBI -9.3185 0.71890 STATS LOCAL FORWARD -4.0413 0.71890 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31809 1.38731 1.36094 1.48639 1.38629 1.38629 1.38629 1.38629 0.24380 3.89735 1.62932 1.46634 0.26236 0.00000 * 1 1.60426 1.46109 2.07681 0.81724 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.05050 3.70405 3.70405 1.46634 0.26236 1.61418 0.22196 2 1.60592 1.40310 2.05756 0.85403 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.04887 3.73606 3.73606 1.46634 0.26236 0.21497 1.64281 3 1.33096 2.01835 0.89122 1.64637 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 4 1.24311 1.86228 0.99110 1.68724 4 g - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 5 2.37926 3.07910 0.21061 2.97023 5 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 6 3.12390 0.25808 2.89206 2.05560 6 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 7 2.90585 0.24252 2.82085 2.29171 7 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 8 1.69387 2.26680 0.51240 2.17600 8 G - - ( 1.38629 1.38629 1.38629 1.38629 0.06978 3.05534 3.89735 0.71349 0.67321 1.09861 0.40547 9 2.54681 2.52158 3.06155 0.23002 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 10 2.54681 2.52158 3.06155 0.23002 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 11 0.27428 2.81436 2.32706 2.49667 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 12 2.76433 0.21868 3.33941 2.32336 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 13 3.12402 0.25806 2.89211 2.05562 14 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 14 2.89467 1.84778 2.63652 0.33479 15 U - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 15 1.77606 2.71453 0.37021 2.60543 16 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 16 3.12763 0.25763 2.89379 2.05624 17 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 17 0.37104 2.69051 1.77358 2.62535 18 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 18 2.54127 3.16977 0.18078 3.10996 19 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 19 2.76433 0.21868 3.33941 2.32336 20 C - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 20 2.54681 2.52158 3.06155 0.23002 21 U - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 21 2.63040 3.49846 0.16079 3.07395 22 G - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 22 0.16676 3.17169 2.90243 2.86863 23 A - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 23 2.54681 2.52158 3.06155 0.23002 24 U - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 24 2.63040 3.49846 0.16079 3.07395 25 G - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 25 0.16676 3.17169 2.90243 2.86863 26 A - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 26 2.54795 3.17744 0.17920 3.12072 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 27 3.13466 0.25681 2.89705 2.05743 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 28 2.84953 1.82467 2.59807 0.34752 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 29 3.11438 0.25921 2.88761 2.05397 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 30 2.76433 0.21868 3.33941 2.32336 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 31 0.16676 3.17169 2.90243 2.86863 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 32 0.16676 3.17169 2.90243 2.86863 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 33 0.62362 2.09566 1.75820 1.77990 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 34 0.16676 3.17169 2.90243 2.86863 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 35 0.16676 3.17169 2.90243 2.86863 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 36 2.33179 3.05952 0.22309 2.88368 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.05602 3.89735 3.37613 1.46634 0.26236 1.09861 0.40547 37 0.39260 2.78404 1.66271 2.61336 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04203 3.88337 3.88337 1.46634 0.26236 0.78280 0.61088 38 2.32999 3.05713 0.22366 2.88075 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 39 3.29639 0.21531 2.99511 2.23808 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 40 2.63040 3.49846 0.16079 3.07395 41 G - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 41 0.16676 3.17169 2.90243 2.86863 42 A - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 42 0.16676 3.17169 2.90243 2.86863 43 A - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 43 0.37043 2.69260 1.77391 2.62842 44 A - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 44 3.13241 0.25707 2.89601 2.05705 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 45 3.13067 0.25727 2.89521 2.05676 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.12543 2.32699 3.89735 1.15734 0.37734 1.09861 0.40547 46 1.24640 1.92446 1.62513 0.99528 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.12543 2.32699 3.89735 0.84052 0.56473 1.09861 0.40547 47 0.79382 2.24099 1.31447 1.75495 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 48 1.34550 1.62907 2.17689 0.84377 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 49 1.65419 1.75179 2.19209 0.64701 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 50 0.29595 2.76565 2.24120 2.44291 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 51 2.33346 3.06174 0.22257 2.88639 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 52 2.33345 3.06172 0.22258 2.88637 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 53 2.85313 2.05983 2.50312 0.31057 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 54 2.76433 0.21868 3.33941 2.32336 61 C - - , 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 55 3.31582 0.21341 3.00357 2.24182 62 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 56 2.85374 2.05990 2.50334 0.31048 63 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 57 2.33384 3.06223 0.22246 2.88700 64 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 58 2.83879 0.42618 2.53443 1.56446 65 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 59 0.37940 2.82214 1.68491 2.64806 66 A - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 60 2.33742 3.06699 0.22134 2.89282 67 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 61 2.54681 2.52158 3.06155 0.23002 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 62 0.16676 3.17169 2.90243 2.86863 69 A - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 63 2.22559 0.48017 2.80272 1.54801 70 C - - - 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 64 2.38774 1.59164 1.85953 0.59998 71 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 65 2.53487 2.98851 0.20739 2.85317 72 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 66 2.33374 3.06210 0.22249 2.88684 73 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 67 3.19170 0.26469 2.91079 1.98761 74 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 68 1.95527 1.19839 1.59665 1.03783 75 u - - ) 1.38629 1.38629 1.38629 1.38629 0.04144 3.89735 3.89735 1.46634 0.26236 1.09861 0.40547 69 1.60478 2.00394 1.87839 0.67055 76 U - - : 1.38629 1.38629 1.38629 1.38629 0.21016 3.89735 1.77637 1.46634 0.26236 1.09861 0.40547 70 0.77766 2.16342 1.41128 1.70508 77 a - - : 1.38629 1.38629 1.38629 1.38629 0.04887 3.73606 3.73606 1.46634 0.26236 2.33596 0.10172 71 0.81764 1.83862 1.76680 1.47572 78 a - - : 1.38629 1.38629 1.38629 1.38629 0.04887 3.73606 3.73606 1.46634 0.26236 2.33596 0.10172 72 1.37156 1.91876 1.09782 1.32462 79 g - - : 1.38629 1.38629 1.38629 1.38629 0.04887 3.73606 3.73606 1.46634 0.26236 2.33596 0.10172 73 0.88547 1.75554 1.62661 1.52294 80 a - - : 1.38629 1.38629 1.38629 1.38629 0.04887 3.73606 3.73606 1.46634 0.26236 2.33596 0.10172 74 1.21125 1.50826 1.78823 1.15956 81 u - - : 1.38629 1.38629 1.38629 1.38629 0.04887 3.73606 3.73606 1.46634 0.26236 2.33596 0.10172 75 1.06615 1.73468 1.42270 1.43486 82 a - - : 1.38629 1.38629 1.38629 1.38629 0.15122 3.73606 2.14991 1.46634 0.26236 2.33596 0.10172 76 1.26787 1.44962 1.50801 1.33728 83 a - - : 1.38629 1.38629 1.38629 1.38629 0.05400 3.63884 3.63884 1.46634 0.26236 2.65495 0.07290 77 1.34612 1.65566 2.06771 0.86202 84 u - - : 1.38629 1.38629 1.38629 1.38629 0.48458 0.95700 * 0.13509 2.06862 0.00000 * //