INFERNAL1/a [1.1.5 | Sep 2023] NAME ZNRD1-AS1_2 ACC RF02219 DESC ZNRD1 antisense RNA 1 conserved region 2 STATES 232 NODES 78 CLEN 76 W 156 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 18:49:16 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02219/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 34 EFFN 4.519775 CKSUM 137911199 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 61.30 NC 59.80 EFP7GF -10.9035 0.71862 ECMLC 0.71694 -8.95699 -0.01516 1600000 730035 0.001644 ECMGC 0.36501 -21.61663 -6.79304 1600000 89525 0.004468 ECMLI 0.65427 -8.00042 1.07972 1600000 456303 0.002630 ECMGI 0.39920 -13.52068 -0.87582 1600000 62271 0.006424 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 156 238 -7.743 -7.950 -0.030 -6.365 IL 1 1 2 1 4 1 32 158 240 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 32 157 240 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 31 156 239 -6.070 -0.044 -6.070 -2.934 1.822 -3.181 -2.169 D 4 2 3 5 3 0 27 153 235 -11.551 -1.585 -0.585 IL 5 5 3 5 3 2 33 162 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 31 154 237 -6.070 -0.044 -6.070 0.886 -0.871 -0.877 0.085 D 7 5 3 8 3 0 26 151 234 -11.551 -1.585 -0.585 IL 8 8 3 8 3 2 32 161 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 1 30 153 236 -6.070 -0.044 -6.070 0.711 -0.757 -0.100 -0.255 D 10 8 3 11 3 0 25 150 233 -11.551 -1.585 -0.585 IL 11 11 3 11 3 2 32 160 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - g - - - ML 12 11 3 14 3 1 29 152 234 -6.070 -0.044 -6.070 0.004 -0.939 0.688 -0.210 D 13 11 3 14 3 0 24 149 231 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 31 159 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 28 151 233 -6.070 -0.044 -6.070 1.885 -3.481 -3.148 -3.279 D 16 14 3 17 3 0 23 148 230 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 30 157 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 28 149 232 -6.070 -0.044 -6.070 -2.113 -1.843 -1.646 1.665 D 19 17 3 20 3 0 23 146 228 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 29 156 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 27 148 230 -6.070 -0.044 -6.070 -1.937 1.237 -2.152 0.210 D 22 20 3 23 3 0 22 145 227 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 28 155 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 26 147 229 -6.070 -0.044 -6.070 -2.199 -1.172 -2.421 1.656 D 25 23 3 26 3 0 21 144 226 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 28 154 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 25 146 228 -6.070 -0.044 -6.070 -2.219 -1.217 -2.441 1.665 D 28 26 3 29 3 0 20 143 224 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 27 152 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 24 144 226 -6.070 -0.044 -6.070 -1.718 0.480 -1.915 1.026 D 31 29 3 32 3 0 19 141 223 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 26 151 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 24 143 225 -4.744 -0.077 -6.070 -2.692 -2.188 -2.885 1.803 D 34 32 3 35 3 0 19 140 222 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 24 143 225 -3.144 -0.174 -10.788 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - U - - - ML 36 35 3 38 3 1 23 142 224 -6.070 -0.044 -6.070 -2.692 -2.188 -2.885 1.803 D 37 35 3 38 3 0 18 139 221 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 25 149 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - c - - - ML 39 38 3 41 3 1 22 141 222 -6.070 -0.044 -6.070 -1.764 0.884 -1.965 0.682 D 40 38 3 41 3 0 17 138 219 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 24 148 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 42 41 3 44 3 1 21 140 221 -6.070 -0.044 -6.070 -2.692 -2.188 -2.885 1.803 D 43 41 3 44 3 0 16 137 218 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 23 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - C - - - ML 45 44 3 47 3 1 21 138 220 -6.070 -0.044 -6.070 -2.934 1.822 -3.181 -2.169 D 46 44 3 47 3 0 16 135 216 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 22 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - C - - - ML 48 47 3 50 3 1 20 137 218 -6.070 -0.044 -6.070 -1.896 1.178 -2.107 0.307 D 49 47 3 50 3 0 15 134 215 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 21 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 51 50 3 53 3 1 19 136 217 -6.070 -0.044 -6.070 1.653 -1.449 -2.230 -1.855 D 52 50 3 53 3 0 14 133 214 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 21 143 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - G - - - ML 54 53 3 56 3 1 18 135 215 -6.070 -0.044 -6.070 -0.849 -2.682 1.629 -2.352 D 55 53 3 56 3 0 13 131 212 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 20 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 57 56 3 59 3 1 18 133 214 -6.070 -0.044 -6.070 -0.561 -1.500 -1.755 1.418 D 58 56 3 59 3 0 12 130 211 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 19 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - G - - - ML 60 59 3 62 3 1 17 132 213 -6.070 -0.044 -6.070 -2.491 -3.537 1.861 -3.265 D 61 59 3 62 3 0 12 129 209 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 18 139 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - G - - - ML 63 62 3 65 3 1 16 131 211 -6.070 -0.044 -6.070 -2.491 -3.537 1.861 -3.265 D 64 62 3 65 3 0 11 128 208 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 18 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - g - - - ML 66 65 3 68 3 1 15 129 210 -6.070 -0.044 -6.070 0.236 -1.470 0.928 -0.839 D 67 65 3 68 3 0 10 126 206 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 17 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - G - - - ML 69 68 3 71 3 1 15 128 208 -6.070 -0.044 -6.070 -2.491 -3.537 1.861 -3.265 D 70 68 3 71 3 0 10 125 205 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 16 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 72 71 3 74 3 1 14 127 207 -6.070 -0.044 -6.070 1.885 -3.481 -3.148 -3.279 D 73 71 3 74 3 0 9 124 204 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 15 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - c - - - ML 75 74 3 77 3 1 13 126 205 -6.070 -0.044 -6.070 -0.293 0.824 -0.910 -0.183 D 76 74 3 77 3 0 8 122 202 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 15 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 1 12 124 204 -6.070 -0.044 -6.070 -1.285 -0.798 -1.820 1.449 D 79 77 3 80 3 0 7 121 201 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 14 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - G - - - ML 81 80 3 83 3 1 12 123 203 -6.070 -0.044 -6.070 -0.762 -1.873 1.516 -1.849 D 82 80 3 83 3 0 7 120 199 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 13 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - u - - - ML 84 83 3 86 3 1 11 122 201 -6.070 -0.044 -6.070 -0.540 0.155 0.034 0.233 D 85 83 3 86 3 0 6 118 198 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 13 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - u - - - ML 87 86 3 89 3 1 10 120 200 -6.070 -0.044 -6.070 -0.350 -1.043 -0.127 0.860 D 88 86 3 89 3 0 5 117 196 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 12 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - G - - - ML 90 89 3 92 3 1 10 119 198 -6.070 -0.044 -6.070 -0.239 -2.352 1.437 -2.006 D 91 89 3 92 3 0 5 116 195 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 11 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - a - - - ML 93 92 3 95 3 1 9 118 197 -6.070 -0.044 -6.070 0.766 -0.879 0.063 -0.491 D 94 92 3 95 3 0 4 115 193 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 11 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 96 95 3 98 3 1 8 116 195 -6.070 -0.044 -6.070 -2.488 1.667 -2.750 -1.004 D 97 95 3 98 3 0 3 113 192 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 10 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 99 98 3 101 3 1 8 115 194 -6.070 -0.044 -6.070 -2.934 1.822 -3.181 -2.169 D 100 98 3 101 3 0 3 112 190 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 9 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - U - - - ML 102 101 3 104 3 1 7 114 192 -6.070 -0.044 -6.070 -0.823 -0.565 -1.494 1.265 D 103 101 3 104 3 0 2 111 189 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 9 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - g - - - ML 105 104 3 107 3 1 7 112 191 -6.070 -0.044 -6.070 0.141 -0.834 0.729 -0.557 D 106 104 3 107 3 0 1 109 188 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 8 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - c - - - ML 108 107 3 110 3 1 6 111 189 -6.070 -0.044 -6.070 -0.702 0.912 -0.663 -0.197 D 109 107 3 110 3 0 1 108 186 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 7 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - a - - - ML 111 110 3 113 3 1 5 110 188 -6.070 -0.044 -6.070 0.627 -1.025 -0.455 0.304 D 112 110 3 113 3 0 0 107 185 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 7 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - G - - - ML 114 113 3 116 3 1 5 108 186 -6.070 -0.044 -6.070 -1.435 -2.983 1.743 -2.676 D 115 113 3 116 3 0 0 105 183 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 6 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - C - - - ML 117 116 3 119 3 1 4 107 185 -6.070 -0.044 -6.070 -1.313 1.644 -2.548 -1.731 D 118 116 3 119 3 0 0 104 181 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 6 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - A - - - ML 120 119 3 122 3 1 4 106 183 -6.070 -0.044 -6.070 1.195 -1.353 -0.429 -0.793 D 121 119 3 122 3 0 0 102 180 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 5 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - A - - - ML 123 122 3 125 3 1 3 104 182 -6.070 -0.044 -6.070 1.773 -2.855 -1.843 -2.591 D 124 122 3 125 3 0 0 101 178 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 5 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 126 125 3 128 3 1 3 103 180 -6.070 -0.044 -6.070 -1.178 -0.705 -1.733 1.403 D 127 125 3 128 3 0 0 100 177 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 4 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - C - - - ML 129 128 3 131 3 1 2 102 179 -6.070 -0.044 -6.070 -2.296 1.559 -2.541 -0.562 D 130 128 3 131 3 0 0 98 175 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 4 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - C - - - ML 132 131 3 134 3 1 2 100 177 -6.070 -0.044 -6.070 -2.597 1.716 -2.868 -1.280 D 133 131 3 134 3 0 0 97 174 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 3 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - u - - - ML 135 134 3 137 3 1 2 99 176 -6.070 -0.044 -6.070 -0.520 -1.069 0.060 0.835 D 136 134 3 137 3 0 0 96 172 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 3 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 138 137 3 140 3 1 1 97 174 -6.070 -0.044 -6.070 1.425 -1.306 -0.996 -1.286 D 139 137 3 140 3 0 0 94 171 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 2 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - G - - - ML 141 140 3 143 3 1 1 96 173 -6.070 -0.044 -6.070 -2.491 -3.537 1.861 -3.265 D 142 140 3 143 3 0 0 93 169 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 2 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - G - - - ML 144 143 3 146 3 1 1 95 171 -6.070 -0.044 -6.070 -1.037 -2.779 1.671 -2.456 D 145 143 3 146 3 0 0 91 167 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 2 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 147 146 3 149 3 1 1 93 169 -6.070 -0.044 -6.070 -0.527 -2.512 1.540 -2.172 D 148 146 3 149 3 0 0 90 166 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - U - - - ML 150 149 3 152 3 1 1 92 168 -6.070 -0.044 -6.070 -2.692 -2.188 -2.885 1.803 D 151 149 3 152 3 0 0 89 164 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 100 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - C - - - ML 153 152 3 155 3 1 1 90 166 -6.070 -0.044 -6.070 -2.478 1.705 -1.815 -1.859 D 154 152 3 155 3 0 0 87 163 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - U - - - ML 156 155 3 158 3 1 1 89 165 -6.070 -0.044 -6.070 -1.990 -0.661 -2.203 1.535 D 157 155 3 158 3 0 0 86 161 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - U - - - ML 159 158 3 161 3 1 1 88 163 -6.070 -0.044 -6.070 -1.289 -0.673 -0.910 1.282 D 160 158 3 161 3 0 0 84 159 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - u - - - ML 162 161 3 164 3 1 1 86 161 -6.070 -0.044 -6.070 -1.025 -0.992 0.332 0.805 D 163 161 3 164 3 0 0 83 158 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - a - - - ML 165 164 3 167 3 1 1 85 160 -6.070 -0.044 -6.070 0.994 -0.921 -0.394 -0.476 D 166 164 3 167 3 0 0 81 156 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 93 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - G - - - ML 168 167 3 170 3 1 1 83 158 -6.070 -0.044 -6.070 -0.810 -2.661 1.620 -2.330 D 169 167 3 170 3 0 0 80 154 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - a - - - ML 171 170 3 173 3 1 1 82 156 -6.070 -0.044 -6.070 0.911 -1.303 -1.370 0.409 D 172 170 3 173 3 0 0 78 153 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - u - - - ML 174 173 3 176 3 1 1 80 155 -6.070 -0.044 -6.070 0.107 -0.694 -0.567 0.704 D 175 173 3 176 3 0 0 77 151 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - g - - - ML 177 176 3 179 3 1 1 79 153 -4.572 -0.085 -6.070 -0.383 -1.112 0.545 0.391 D 178 176 3 179 3 0 0 76 150 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 80 154 -0.950 -1.053 -11.934 0.000 0.000 0.000 0.000 [ MATL 60 ] 63 - c - - - ML 180 179 3 182 3 1 1 78 152 -6.070 -0.044 -6.070 0.018 0.284 -0.696 0.205 D 181 179 3 182 3 0 0 74 148 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 64 - U - - - ML 183 182 3 185 3 1 1 76 150 -6.070 -0.044 -6.070 -2.066 -1.816 -1.557 1.649 D 184 182 3 185 3 0 0 72 146 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 65 - U - - - ML 186 185 3 188 3 1 1 74 148 -6.070 -0.044 -6.070 -0.856 -0.629 -0.710 1.131 D 187 185 3 188 3 0 0 71 144 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 66 - U - - - ML 189 188 3 191 3 1 1 73 146 -6.070 -0.044 -6.070 -2.692 -2.188 -2.885 1.803 D 190 188 3 191 3 0 0 69 142 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 67 - a - - - ML 192 191 3 194 3 1 1 71 144 -6.070 -0.044 -6.070 0.737 -0.769 -0.003 -0.418 D 193 191 3 194 3 0 0 67 140 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 68 - G - - - ML 195 194 3 197 3 1 1 70 142 -6.070 -0.044 -6.070 -0.394 -1.170 1.266 -1.360 D 196 194 3 197 3 0 0 66 138 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 69 - C - - - ML 198 197 3 200 3 1 1 68 140 -6.070 -0.044 -6.070 -2.934 1.822 -3.181 -2.169 D 199 197 3 200 3 0 0 64 136 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 70 - C - - - ML 201 200 3 203 3 1 1 66 138 -6.070 -0.044 -6.070 -2.934 1.822 -3.181 -2.169 D 202 200 3 203 3 0 0 62 134 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 71 - C - - - ML 204 203 3 206 3 1 1 64 136 -6.070 -0.044 -6.070 -2.934 1.822 -3.181 -2.169 D 205 203 3 206 3 0 0 60 132 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 72 - A - - - ML 207 206 3 209 3 1 1 63 134 -6.070 -0.044 -6.070 1.885 -3.481 -3.148 -3.279 D 208 206 3 209 3 0 0 58 129 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 73 - G - - - ML 210 209 3 212 3 1 1 61 132 -6.070 -0.044 -6.070 -0.543 -1.488 1.391 -1.576 D 211 209 3 212 3 0 0 56 127 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 74 - G - - - ML 213 212 3 215 3 1 1 59 130 -6.070 -0.044 -6.070 -1.142 -2.833 1.692 -2.514 D 214 212 3 215 3 0 0 54 124 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 75 - C - - - ML 216 215 3 218 3 1 1 56 127 -6.070 -0.044 -6.070 -1.553 1.525 -2.253 -0.807 D 217 215 3 218 3 0 0 51 121 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 67 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 76 - C - - - ML 219 218 3 221 3 1 1 54 124 -6.070 -0.044 -6.070 -1.799 1.389 -1.614 -0.382 D 220 218 3 221 3 0 0 48 118 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 77 - A - - - ML 222 221 3 224 3 1 1 51 121 -6.070 -0.044 -6.070 1.885 -3.481 -3.148 -3.279 D 223 221 3 224 3 0 0 44 113 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 78 - A - - - ML 225 224 3 227 3 1 1 47 116 -6.070 -0.044 -6.070 1.599 -2.341 -0.919 -2.029 D 226 224 3 227 3 0 0 32 101 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 79 - U - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 -1.145 -0.454 -1.657 1.322 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ZNRD1-AS1_2 ACC RF02219 DESC ZNRD1 antisense RNA 1 conserved region 2 LENG 76 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sun Jul 7 18:49:16 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02219/CM NSEQ 34 EFFN 4.519775 CKSUM 137911199 STATS LOCAL MSV -8.7888 0.71862 STATS LOCAL VITERBI -9.3474 0.71862 STATS LOCAL FORWARD -3.7501 0.71862 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.49256 1.38812 1.42254 1.25682 1.38629 1.38629 1.38629 1.38629 0.01731 5.36734 4.38217 0.39730 1.11515 0.00000 * 1 3.41984 0.12318 3.59120 2.88941 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 2 0.77225 1.99002 1.99447 1.32709 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 3 0.89335 1.91071 1.45541 1.56332 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 4 1.38355 2.03699 0.90956 1.53159 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 5 0.07941 3.79932 3.56832 3.65942 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 6 2.85123 2.66381 2.52688 0.23239 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 7 2.72918 0.52895 2.87780 1.24047 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 8 2.91034 2.19882 3.06428 0.23836 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 9 2.92409 2.22997 3.07830 0.23229 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 10 2.57687 1.05345 2.71385 0.67536 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 11 3.25205 2.90273 3.38607 0.13629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05360 3.28852 4.20764 0.12011 2.17877 1.09861 0.40547 12 3.25205 2.90273 3.38607 0.13629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 13 2.60898 0.77370 2.74848 0.91364 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 14 3.25205 2.90273 3.38607 0.13629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 15 3.41984 0.12318 3.59120 2.88941 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 16 2.70055 0.56996 2.84692 1.17357 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 17 0.24075 2.39077 2.93173 2.67227 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 18 1.97447 3.24498 0.25719 3.01638 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 19 1.77529 2.42615 2.60301 0.40326 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 20 3.11274 3.83810 0.09653 3.64934 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 21 3.11274 3.83810 0.09653 3.64934 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 22 1.22301 2.40507 0.74300 1.96817 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 23 3.11274 3.83810 0.09653 3.64934 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 24 0.07941 3.79932 3.56832 3.65942 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 25 1.58921 0.81504 2.01728 1.51287 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 26 2.27684 1.93913 2.64798 0.38160 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 27 1.91473 2.68481 0.33551 2.66772 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 28 1.76087 1.27895 1.36284 1.22472 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 29 1.62898 2.10911 1.47455 0.79045 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 30 1.55187 3.01678 0.39017 2.77667 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 31 0.85546 1.99589 1.34286 1.72641 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 32 3.11056 0.23115 3.29254 2.08230 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 33 3.41984 0.12318 3.59120 2.88941 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 34 1.95681 1.77802 2.42218 0.50918 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 35 1.28882 1.96463 0.88133 1.77217 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 36 1.87309 0.75420 1.84571 1.52302 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 37 0.95165 2.09651 1.70176 1.17554 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 38 2.38090 3.45412 0.17816 3.24131 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 39 2.29643 0.24674 3.15244 2.58640 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 40 0.55820 2.32402 1.68397 1.93622 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 41 0.15755 3.36508 2.66346 3.18199 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 42 2.20269 1.87510 2.58784 0.41404 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 43 2.97757 0.30538 3.14769 1.77617 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 44 3.18670 0.19665 3.37397 2.27344 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 45 1.74702 2.12713 1.34486 0.80755 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 46 0.39889 2.29181 2.07667 2.27786 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 47 3.11274 3.83810 0.09653 3.64934 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 48 2.10523 3.31238 0.22793 3.08848 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 49 1.75154 3.12723 0.31858 2.89186 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 50 3.25205 2.90273 3.38607 0.13629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 51 3.10398 0.20442 2.64408 2.67459 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 52 2.76550 1.84442 2.91330 0.32208 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 53 2.27998 1.85269 2.01700 0.49784 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 54 2.09671 2.07393 1.15638 0.82822 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 55 0.69716 2.02439 1.65962 1.71639 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 56 1.94769 3.23108 0.26374 3.00158 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 57 0.75483 2.28924 2.33623 1.10300 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 58 1.31196 1.86750 1.77900 0.89798 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 59 1.65197 2.15681 1.00845 1.11520 - g - - : 1.38629 1.38629 1.38629 1.38629 0.05862 3.16877 4.20764 0.72959 0.65799 1.09861 0.40547 60 1.37405 1.18954 1.86869 1.24399 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 61 2.81819 2.64496 2.46534 0.24297 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 62 1.97985 1.82234 1.87809 0.60261 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 63 3.25205 2.90273 3.38607 0.13629 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 64 0.87551 1.91935 1.38806 1.67617 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 65 1.65952 2.19725 0.50868 2.32922 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 66 3.41984 0.12318 3.59120 2.88941 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 67 3.41984 0.12318 3.59120 2.88941 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 68 3.41984 0.12318 3.59120 2.88941 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 69 0.07941 3.79932 3.56832 3.65942 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 70 1.76267 2.41767 0.42244 2.47887 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 71 2.17802 3.34974 0.21336 3.12865 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 72 2.46276 0.32918 2.94819 1.94592 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 73 2.63302 0.42378 2.50474 1.65091 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 74 0.07941 3.79932 3.56832 3.65942 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 75 0.27817 3.00905 2.02313 2.79278 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03021 4.20764 4.20764 1.46634 0.26236 1.09861 0.40547 76 2.17997 1.70127 2.53481 0.46964 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //