INFERNAL1/a [1.1.5 | Sep 2023] NAME group-II-D1D4-1 ACC RF01998 DESC Group II catalytic intron D1-D4-1 STATES 266 NODES 72 CLEN 84 W 145 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 09:49:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01998/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 237 EFFN 6.021194 CKSUM 3412095367 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.00 NC 34.90 EFP7GF -14.3332 0.71858 ECMLC 0.75667 -7.96292 0.27881 1600000 613117 0.001957 ECMGC 0.38363 -17.43111 -5.80281 1600000 34628 0.011551 ECMLI 0.51884 -9.85167 1.61882 1600000 461117 0.002602 ECMGI 0.41177 -12.25604 -1.52406 1600000 33208 0.012045 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 0 1 145 220 -6.601 -17.070 -0.015 IL 1 1 2 1 3 9 38 150 224 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 8 37 147 221 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 118 4 7 36 146 220 [ BEGR 42 ] - - - - - - S 4 3 1 5 5 0 2 99 173 -8.051 -0.020 -7.866 -8.078 -8.970 IL 5 5 2 5 5 1 1 100 174 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 72 175 G C - - MP 6 5 2 10 6 2 4 99 173 -9.637 -9.576 -0.015 -8.353 -8.633 -9.028 -4.549 -3.068 -4.443 0.546 -5.416 -4.760 -0.313 -5.046 -3.864 3.542 -4.099 -0.533 -0.625 -4.195 -2.560 -3.394 ML 7 5 2 10 6 1 1 97 171 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 2 10 6 1 1 97 171 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 2 10 6 0 0 93 168 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 1 98 172 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 1 98 172 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 73 174 c g - - MP 12 11 6 16 6 2 3 97 171 -9.637 -9.576 -0.019 -7.443 -8.633 -9.028 -3.570 -3.477 -3.643 0.314 -2.237 -4.466 2.555 -2.900 -3.598 1.434 -4.123 -1.382 2.000 -3.811 -0.399 -2.489 ML 13 11 6 16 6 1 1 95 169 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 1 95 169 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 0 92 166 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 1 96 170 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 1 96 170 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 74 173 C G - - MP 18 17 6 22 4 2 2 95 169 -8.054 -8.261 -0.024 -6.675 -7.707 -7.812 -6.791 -3.992 -5.205 -4.738 3.946 -6.614 -7.316 -3.864 -6.803 -5.928 -2.308 -7.676 -3.123 -6.119 ML 19 17 6 22 4 1 1 94 168 -3.812 -3.995 -0.484 -2.724 0.273 -0.130 -0.366 0.140 MR 20 17 6 22 4 1 1 93 167 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 0 92 166 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 1 95 169 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 1 94 169 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 75 - A - - - ML 24 23 6 26 3 1 1 93 167 -9.020 -0.010 -7.674 1.585 -2.836 -0.555 -2.475 D 25 23 6 26 3 0 0 91 165 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 93 168 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 76 - U - - - ML 27 26 3 29 3 1 1 92 166 -9.020 -0.020 -6.431 -2.365 -2.499 -3.379 1.821 D 28 26 3 29 3 0 0 90 164 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 92 167 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 77 - A - - - ML 30 29 3 32 3 1 1 91 165 -9.010 -0.018 -6.561 1.873 -3.302 -2.914 -3.273 D 31 29 3 32 3 0 0 89 163 -6.349 -1.362 -0.740 IL 32 32 3 32 3 1 1 91 166 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 78 - G - - - ML 33 32 3 35 3 1 1 90 164 -9.012 -0.014 -7.023 -2.296 -3.410 1.837 -2.942 D 34 32 3 35 3 0 0 88 162 -6.322 -1.835 -0.500 IL 35 35 3 35 3 1 1 90 165 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 79 - U - - - ML 36 35 3 38 3 1 1 89 163 -9.008 -0.010 -7.662 -2.388 -2.289 -2.766 1.790 D 37 35 3 38 3 0 0 87 161 -6.389 -1.902 -0.473 IL 38 38 3 38 3 1 1 90 164 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 80 - A - - - ML 39 38 3 41 3 1 1 88 162 -5.165 -0.048 -7.667 1.905 -3.607 -3.464 -3.588 D 40 38 3 41 3 0 0 86 160 -5.755 -0.868 -1.205 IL 41 41 3 41 3 1 1 88 162 -2.153 -0.459 -4.392 0.000 0.000 0.000 0.000 [ MATR 52 ] - 172 - G - - MR 42 41 3 44 3 1 1 87 161 -9.349 -0.012 -7.155 -1.696 -2.552 1.727 -2.253 D 43 41 3 44 3 0 0 85 159 -6.573 -1.406 -0.708 IR 44 44 3 44 3 1 1 87 161 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 53 ] - 171 - A - - MR 45 44 3 47 3 1 1 86 160 -7.472 -0.015 -7.672 1.799 -2.706 -2.340 -2.570 D 46 44 3 47 3 0 0 83 158 -6.500 -1.678 -0.564 IR 47 47 3 47 3 1 1 86 160 -1.861 -0.574 -4.239 0.000 0.000 0.000 0.000 [ MATR 54 ] - 168 - A - - MR 48 47 3 50 3 1 1 85 159 -9.354 -0.014 -6.942 1.802 -2.710 -2.563 -2.381 D 49 47 3 50 3 0 0 82 157 -6.500 -1.678 -0.564 IR 50 50 3 50 3 1 1 85 159 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 55 ] - 167 - G - - MR 51 50 3 53 5 1 1 84 158 -8.040 -0.020 -7.855 -8.067 -8.959 -1.012 -2.297 1.628 -2.247 D 52 50 3 53 5 0 0 82 156 -5.456 -0.811 -2.876 -4.513 -2.139 IR 53 53 3 53 5 1 1 84 158 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 82 166 g c - - MP 54 53 3 58 6 2 2 83 157 -7.837 -9.569 -0.026 -7.558 -8.625 -7.896 -3.076 -2.346 -2.829 0.957 -3.290 -3.863 1.599 -3.501 -3.041 2.423 -3.119 1.274 0.524 -3.166 -0.912 -2.220 ML 55 53 3 58 6 1 1 80 154 -6.285 -6.631 -1.345 -1.040 -6.481 -3.542 0.320 -0.245 -0.288 0.123 MR 56 53 3 58 6 1 1 79 154 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 3 58 6 0 0 74 148 -9.170 -7.869 -3.666 -4.348 -4.365 -0.291 IL 58 58 5 58 6 1 1 82 156 -2.641 -2.904 -0.719 -4.559 -5.336 -4.996 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 82 156 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 84 165 c g - - MP 60 59 6 64 6 2 2 81 155 -9.623 -9.563 -0.019 -8.339 -8.619 -7.611 -2.335 -2.273 -2.507 0.798 -1.954 -3.357 2.230 -2.716 -1.993 1.147 -2.895 -0.909 1.876 -2.270 0.209 -1.663 ML 61 59 6 64 6 1 1 77 151 -6.310 -6.656 -1.226 -1.065 -6.506 -4.036 0.284 -0.367 -0.286 0.247 MR 62 59 6 64 6 1 1 76 150 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 70 143 -9.280 -7.979 -3.776 -4.458 -4.475 -0.267 IL 64 64 5 64 6 1 1 80 154 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 80 154 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 85 164 c g - - MP 66 65 6 70 6 2 2 79 153 -2.798 -6.085 -0.308 -8.338 -8.618 -5.165 -1.655 -1.994 -2.225 1.014 -1.830 -3.075 2.070 -2.510 -0.901 1.376 -2.848 -0.769 1.568 -2.367 0.055 -1.441 ML 67 65 6 70 6 1 1 69 143 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 68 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 62 133 -9.372 -8.070 -3.867 -4.550 -4.567 -0.249 IL 70 70 5 70 6 1 1 85 159 -0.359 -2.681 -4.155 -8.183 -8.959 -8.619 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 66 127 -0.873 -1.497 -6.653 -6.269 -3.708 0.000 0.000 0.000 0.000 [ MATP 59 ] 104 156 g c - - MP 72 71 6 76 6 2 2 64 125 -8.395 -9.461 -0.058 -8.238 -8.518 -5.114 -2.668 -2.496 -2.616 1.530 -2.689 -3.594 1.795 -3.045 -2.878 2.041 -3.081 -0.193 1.186 -2.884 -0.316 -1.615 ML 73 71 6 76 6 1 1 62 123 -6.339 -6.685 -1.188 -1.094 -6.535 -4.065 0.347 -0.546 0.137 -0.085 MR 74 71 6 76 6 1 1 62 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 59 120 -10.528 -9.226 -2.147 -5.705 -5.723 -0.446 IL 76 76 5 76 6 1 1 63 124 -2.609 -2.872 -0.790 -4.528 -5.304 -4.247 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 63 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 106 155 c g - - MP 78 77 6 82 6 2 2 62 123 -9.521 -9.460 -0.045 -8.237 -8.517 -5.523 -2.787 -2.746 -2.917 1.248 -2.573 -3.431 2.175 -3.027 -2.948 1.507 -3.197 -0.547 1.733 -3.050 -0.265 -1.964 ML 79 77 6 82 6 1 1 60 121 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 60 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 56 117 -10.578 -9.276 -3.312 -5.755 -5.772 -0.217 IL 82 82 5 82 6 1 1 61 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 61 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 107 154 c g - - MP 84 83 6 88 4 2 2 60 121 -7.035 -6.549 -0.147 -3.668 -1.880 -1.661 -1.685 1.205 -1.916 -2.471 1.885 -2.387 -2.132 1.475 -2.698 -0.404 1.484 -2.106 0.111 -1.191 ML 85 83 6 88 4 1 1 59 120 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 57 118 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 55 116 -6.146 -5.139 -2.034 -0.488 IL 88 88 5 88 4 1 1 60 121 -1.722 -2.226 -1.154 -4.891 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 1 60 120 -1.514 -0.747 -4.214 0.000 0.000 0.000 0.000 [ MATL 62 ] 109 - u - - - ML 90 89 6 92 3 1 1 58 119 -1.730 -0.671 -3.827 0.195 -0.467 -0.119 0.276 D 91 89 6 92 3 0 0 52 112 -4.196 -0.554 -1.920 IL 92 92 3 92 3 1 1 61 122 -0.437 -2.573 -3.421 0.000 0.000 0.000 0.000 [ MATL 63 ] 137 - g - - - ML 93 92 3 95 3 1 1 29 55 -8.691 -0.012 -7.345 -0.088 -0.880 0.759 -0.279 D 94 92 3 95 3 0 0 27 53 -8.473 -1.538 -0.615 IL 95 95 3 95 3 1 1 30 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 138 - u - - - ML 96 95 3 98 3 1 1 28 54 -8.816 -0.032 -5.662 0.105 -0.323 -0.656 0.575 D 97 95 3 98 3 0 0 26 52 -7.996 -1.851 -0.476 IL 98 98 3 98 3 1 1 29 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 139 - a - - - ML 99 98 3 101 3 1 1 27 53 -8.853 -0.105 -3.874 0.573 -0.518 -0.015 -0.279 D 100 98 3 101 3 0 0 25 51 -7.807 -1.614 -0.580 IL 101 101 3 101 3 1 1 28 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 140 - A - - - ML 102 101 3 104 3 1 1 26 52 -8.822 -0.228 -2.795 1.008 -0.563 -0.924 -0.351 D 103 101 3 104 3 0 0 24 50 -7.970 -3.235 -0.168 IL 104 104 3 104 3 1 1 27 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 141 - u - - - ML 105 104 3 107 3 1 1 25 51 -8.612 -0.179 -3.133 0.186 -0.222 -0.556 0.406 D 106 104 3 107 3 0 0 23 49 -8.693 -4.206 -0.084 IL 107 107 3 107 3 1 1 27 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 142 - a - - - ML 108 107 3 110 3 1 1 24 50 -1.956 -0.596 -3.628 0.198 -0.337 0.195 -0.126 D 109 107 3 110 3 0 0 23 49 -2.189 -3.045 -0.600 IL 110 110 3 110 3 1 1 25 51 -1.020 -1.025 -6.015 0.000 0.000 0.000 0.000 [ MATL 69 ] 151 - u - - - ML 111 110 3 113 3 1 1 13 31 -8.577 -0.013 -7.231 0.118 -0.151 -0.124 0.133 D 112 110 3 113 3 0 0 11 30 -8.779 -1.087 -0.924 IL 113 113 3 113 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 152 - a - - - ML 114 113 3 116 2 1 1 1 1 * 0.000 0.264 -0.139 -0.205 0.033 D 115 113 3 116 2 0 0 0 0 * 0.000 IL 116 116 3 116 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 117 116 3 -1 0 0 0 0 0 [ BEGL 2 ] - - - - - - S 118 3 1 119 1 0 9 70 101 0.000 [ BIF 3 ] - - - - - - B 119 118 1 120 200 0 9 70 101 [ BEGL 4 ] - - - - - - S 120 119 1 121 4 0 0 40 59 -0.051 -7.500 -5.388 -7.547 [ MATP 5 ] 1 43 c g - - MP 121 120 1 125 6 2 2 40 59 -9.618 -9.557 -0.015 -8.334 -8.614 -9.009 -2.493 -2.608 -2.244 0.883 -2.376 -3.082 2.536 -2.340 -2.686 0.705 -2.986 -0.877 1.281 -2.804 0.967 -1.683 ML 122 120 1 125 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 123 120 1 125 6 1 1 40 59 -7.269 -5.998 -1.172 -5.976 -1.110 -4.190 0.147 -0.728 0.507 -0.205 D 124 120 1 125 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 125 125 5 125 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 126 126 6 126 5 1 1 40 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 42 a u - - MP 127 126 6 131 4 2 2 38 57 -8.060 -8.267 -0.084 -4.328 -2.184 -2.068 -2.177 1.926 -2.407 -3.158 1.003 -2.505 -2.441 1.658 -2.977 0.805 0.961 -1.909 -0.513 -0.134 ML 128 126 6 131 4 1 1 40 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 129 126 6 131 4 1 1 39 58 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 130 126 6 131 4 0 0 38 57 -4.568 -4.250 -2.265 -0.520 IL 131 131 5 131 4 1 1 41 60 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 132 132 6 132 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 3 - a - - - ML 133 132 6 135 3 1 1 36 54 -4.146 -0.682 -1.643 0.833 -0.153 -0.949 -0.320 D 134 132 6 135 3 0 0 35 53 -6.158 -0.702 -1.430 IL 135 135 3 135 3 1 1 36 54 -2.355 -0.595 -2.810 0.000 0.000 0.000 0.000 [ MATR 8 ] - 41 - a - - MR 136 135 3 138 5 1 1 35 53 -1.558 -0.671 -7.297 -7.509 -5.621 0.762 -1.180 0.244 -0.559 D 137 135 3 138 5 0 0 33 51 -7.410 -0.179 -5.037 -5.597 -4.063 IR 138 138 3 138 5 1 1 35 53 -1.972 -0.641 -7.371 -5.539 -3.711 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 35 c g - - MP 139 138 3 143 6 2 2 33 51 -8.356 -9.525 -0.029 -8.301 -7.871 -6.911 -1.710 -1.545 -1.835 1.136 -1.673 0.144 1.754 -1.596 -1.656 1.005 -2.544 -0.293 1.368 -1.827 0.180 -1.176 ML 140 138 3 143 6 1 1 31 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 141 138 3 143 6 1 1 31 49 -7.048 -5.777 -1.685 -5.755 -0.889 -3.257 0.544 -0.507 -0.214 -0.035 D 142 138 3 143 6 0 0 30 48 -9.891 -8.590 -1.941 -5.069 -5.086 -0.564 IL 143 143 5 143 6 1 1 33 51 -2.614 -2.648 -0.794 -4.532 -5.308 -4.968 0.000 0.000 0.000 0.000 IR 144 144 6 144 5 1 1 32 50 -2.429 -0.488 -5.940 -4.108 -5.214 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 33 c g - - MP 145 144 6 149 6 2 2 31 49 -9.597 -9.537 -0.018 -8.313 -8.593 -8.040 -1.434 -1.825 -1.597 0.993 -1.384 -1.511 2.071 -2.055 -1.868 1.000 -1.801 -0.401 1.293 -1.520 0.306 -1.011 ML 146 144 6 149 6 1 1 29 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 147 144 6 149 6 1 1 29 47 -7.026 -5.755 -1.663 -5.733 -0.867 -3.460 0.388 -0.502 0.029 -0.051 D 148 144 6 149 6 0 0 27 45 -9.748 -8.446 -4.243 -3.811 -4.943 -0.253 IL 149 149 5 149 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 150 150 6 150 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 32 c g - - MP 151 150 6 155 6 2 2 29 47 -9.595 -9.534 -0.027 -8.310 -8.590 -6.613 -1.188 -1.562 -1.491 1.270 -1.461 -2.611 1.651 -2.143 -1.222 1.281 -2.204 -0.321 1.451 -1.681 0.146 -0.909 ML 152 150 6 155 6 1 1 27 45 -6.319 -6.665 -1.379 -0.939 -6.515 -4.044 0.544 -0.507 -0.214 -0.035 MR 153 150 6 155 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 154 150 6 155 6 0 0 25 43 -9.766 -8.464 -4.261 -3.545 -4.961 -0.276 IL 155 155 5 155 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 156 156 6 156 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 31 a u - - MP 157 156 6 161 6 2 2 27 45 -9.583 -9.522 -0.015 -8.299 -8.578 -8.973 -1.446 -1.899 -1.130 1.564 -1.194 -2.734 1.482 -1.799 -1.120 1.126 -1.942 -0.391 1.458 -1.963 0.093 -0.865 ML 158 156 6 161 6 1 1 25 43 -6.410 -6.756 -1.471 -0.860 -6.606 -4.136 0.390 -0.336 -0.183 0.024 MR 159 156 6 161 6 1 1 25 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 160 156 6 161 6 0 0 23 41 -9.858 -8.556 -4.353 -5.035 -5.053 -0.173 IL 161 161 5 161 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 162 162 6 162 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 30 c g - - MP 163 162 6 167 6 2 2 25 43 -9.583 -9.522 -0.021 -8.299 -8.578 -7.432 -2.144 -2.022 -2.322 1.135 -1.875 -3.170 1.966 -2.584 -2.374 1.245 -2.938 -0.241 1.793 -1.732 -0.003 -1.426 ML 164 162 6 167 6 1 1 23 41 -6.410 -6.756 -1.471 -0.860 -6.606 -4.136 0.545 -0.510 -0.312 0.047 MR 165 162 6 167 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 166 162 6 167 6 0 0 21 39 -9.858 -8.556 -3.658 -5.035 -5.053 -0.224 IL 167 167 5 167 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 168 168 6 168 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 29 g c - - MP 169 168 6 173 6 2 2 23 41 -9.580 -7.247 -0.023 -8.296 -8.576 -8.971 -1.831 -1.786 -1.939 1.545 -1.964 -2.941 1.532 -2.227 -1.775 1.724 -2.736 -0.045 1.210 -2.123 0.149 -1.344 ML 170 168 6 173 6 1 1 22 40 -6.410 -6.756 -1.306 -0.979 -6.606 -4.136 0.403 -0.593 0.123 -0.111 MR 171 168 6 173 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 172 168 6 173 6 0 0 19 37 -9.888 -8.586 -4.383 -5.065 -5.083 -0.170 IL 173 173 5 173 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 174 174 6 174 5 1 1 22 40 -2.230 -0.530 -6.039 -4.207 -5.313 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 26 c g - - MP 175 174 6 179 6 2 2 21 39 -9.584 -9.524 -0.107 -8.300 -8.580 -3.981 -2.919 -2.948 -3.054 0.831 -2.051 -3.900 2.288 -3.081 -3.052 1.049 -3.602 -0.300 1.822 -3.206 0.620 -1.937 ML 176 174 6 179 6 1 1 21 38 -6.346 -6.692 -1.180 -1.101 -6.542 -4.071 0.588 -0.536 -0.238 -0.060 MR 177 174 6 179 6 1 1 20 38 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 178 174 6 179 6 0 0 19 37 -9.888 -8.586 -3.840 -5.065 -5.083 -0.206 IL 179 179 5 179 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 180 180 6 180 5 1 1 20 38 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 25 c g - - MP 181 180 6 185 4 2 2 19 37 -7.814 -6.472 -0.045 -6.059 -2.520 -1.675 -2.484 1.717 -2.537 -3.475 1.825 -2.909 -2.733 1.779 -3.266 -0.613 1.096 -2.766 0.253 -1.788 ML 182 180 6 185 4 1 1 20 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 183 180 6 185 4 1 1 19 37 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 184 180 6 185 4 0 0 19 37 -5.139 -1.972 -1.569 -1.397 IL 185 185 5 185 4 1 1 21 39 -1.634 -2.237 -1.207 -4.945 0.000 0.000 0.000 0.000 IR 186 186 6 186 3 1 1 20 37 -1.560 -0.688 -4.644 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - G - - - ML 187 186 6 189 3 1 1 15 34 -8.966 -0.010 -7.620 -1.088 -2.840 1.676 -2.367 D 188 186 6 189 3 0 0 15 34 -6.948 -1.459 -0.671 IL 189 189 3 189 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - u - - - ML 190 189 3 192 3 1 1 14 33 -8.990 -0.010 -7.644 0.055 -0.014 -1.393 0.669 D 191 189 3 192 3 0 0 14 33 -6.658 -1.192 -0.856 IL 192 192 3 192 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - a - - - ML 193 192 3 195 3 1 1 12 31 -9.013 -0.010 -7.667 0.840 -1.987 0.723 -1.703 D 194 192 3 195 3 0 0 13 32 -6.307 -1.820 -0.506 IL 195 195 3 195 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - A - - - ML 196 195 3 198 2 1 1 1 1 * 0.000 1.759 -2.325 -2.190 -2.343 D 197 195 3 198 2 0 0 0 0 * 0.000 IL 198 198 3 198 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 21 ] - - - - - - E 199 198 3 -1 0 0 0 0 0 [ BEGR 22 ] - - - - - - S 200 119 1 201 3 0 0 44 74 -9.020 -0.010 -7.674 IL 201 201 2 201 3 1 1 46 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 44 - A - - - ML 202 201 2 204 3 1 1 44 74 -9.020 -0.010 -7.674 1.245 -1.524 -0.540 -0.749 D 203 201 2 204 3 0 0 43 73 -6.174 -1.687 -0.566 IL 204 204 3 204 3 1 1 45 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 45 - a - - - ML 205 204 3 207 3 1 1 43 73 -9.020 -0.028 -5.848 0.565 -0.944 -0.023 0.025 D 206 204 3 207 3 0 0 42 72 -6.174 -1.687 -0.566 IL 207 207 3 207 3 1 1 44 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 46 - c - - - ML 208 207 3 210 3 1 1 42 72 -3.450 -0.146 -7.656 -0.554 0.562 -0.895 0.383 D 209 207 3 210 3 0 0 42 72 -2.644 -1.761 -0.876 IL 210 210 3 210 3 1 1 45 75 -0.878 -1.210 -5.420 0.000 0.000 0.000 0.000 [ MATL 26 ] 54 - a - - - ML 211 210 3 213 3 1 1 31 50 -9.020 -0.010 -7.674 0.145 -0.148 0.031 -0.045 D 212 210 3 213 3 0 0 30 49 -6.174 -1.687 -0.566 IL 213 213 3 213 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 55 - g - - - ML 214 213 3 216 3 1 1 30 49 -9.020 -0.010 -7.674 0.218 -0.839 0.318 0.045 D 215 213 3 216 3 0 0 29 48 -6.174 -1.687 -0.566 IL 216 216 3 216 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 56 - u - - - ML 217 216 3 219 3 1 1 29 48 -9.020 -0.010 -7.674 -0.042 -0.632 0.152 0.348 D 218 216 3 219 3 0 0 28 47 -6.174 -1.687 -0.566 IL 219 219 3 219 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 57 - c - - - ML 220 219 3 222 3 1 1 28 47 -9.020 -0.010 -7.674 -0.713 0.936 -0.301 -0.589 D 221 219 3 222 3 0 0 27 46 -6.174 -1.687 -0.566 IL 222 222 3 222 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 58 - A - - - ML 223 222 3 225 3 1 1 27 46 -9.020 -0.010 -7.674 1.835 -3.443 -2.117 -3.190 D 224 222 3 225 3 0 0 26 45 -6.174 -1.687 -0.566 IL 225 225 3 225 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 59 - G - - - ML 226 225 3 228 3 1 1 26 45 -9.020 -0.010 -7.674 -3.007 -4.685 1.917 -4.037 D 227 225 3 228 3 0 0 25 44 -6.174 -1.687 -0.566 IL 228 228 3 228 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 60 - A - - - ML 229 228 3 231 3 1 1 25 44 -9.020 -0.010 -7.674 1.585 -2.233 -0.836 -2.135 D 230 228 3 231 3 0 0 24 43 -6.174 -1.687 -0.566 IL 231 231 3 231 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 61 - A - - - ML 232 231 3 234 5 1 1 24 42 -8.051 -0.020 -7.866 -8.078 -8.970 1.898 -3.464 -3.408 -3.503 D 233 231 3 234 5 0 0 23 41 -4.959 -0.803 -4.221 -2.596 -2.508 IL 234 234 3 234 5 1 1 24 43 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 62 71 g g - - MP 235 234 3 239 6 2 2 23 41 -9.637 -9.576 -0.015 -8.353 -8.633 -9.028 -2.378 -2.338 -1.599 0.836 -2.604 -3.421 0.813 -2.886 0.392 1.595 1.818 -0.103 0.599 -2.701 -0.759 -1.752 ML 236 234 3 239 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 237 234 3 239 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 238 234 3 239 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 239 239 5 239 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 240 240 6 240 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 63 70 U A - - MP 241 240 6 245 6 2 2 21 39 -9.637 -9.576 -0.018 -7.622 -8.633 -9.028 -7.897 -7.875 -7.625 -4.127 -6.306 -8.037 -2.017 -7.124 -7.512 -3.972 -7.953 -5.913 3.947 -5.705 -3.306 -5.034 ML 242 240 6 245 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 243 240 6 245 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 244 240 6 245 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 245 245 5 245 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 246 246 6 246 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 64 69 C G - - MP 247 246 6 251 4 2 2 19 37 -8.055 -8.262 -0.024 -6.676 -5.931 -5.944 -5.686 -2.228 -2.460 -4.859 3.846 -3.768 -5.857 -2.098 -5.967 -3.985 -1.136 -6.107 -2.131 -4.750 ML 248 246 6 251 4 1 1 20 39 -3.799 -3.981 -0.490 -2.711 0.295 -0.181 -0.332 0.133 MR 249 246 6 251 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 250 246 6 251 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 251 251 5 251 4 1 1 22 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 252 252 6 252 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 65 - A - - - ML 253 252 6 255 3 1 1 15 34 -9.020 -0.010 -7.674 1.935 -4.379 -3.852 -4.094 D 254 252 6 255 3 0 0 16 34 -6.174 -1.687 -0.566 IL 255 255 3 255 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 66 - G - - - ML 256 255 3 258 3 1 1 14 32 -9.020 -0.010 -7.674 -3.505 -4.943 1.936 -4.245 D 257 255 3 258 3 0 0 15 33 -6.174 -1.687 -0.566 IL 258 258 3 258 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 67 - C - - - ML 259 258 3 261 3 1 1 12 31 -9.020 -0.010 -7.674 -3.121 1.838 -3.477 -2.188 D 260 258 3 261 3 0 0 13 32 -6.174 -1.687 -0.566 IL 261 261 3 261 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 68 - A - - - ML 262 261 3 264 2 1 1 1 1 * 0.000 1.319 -0.316 -2.003 -1.145 D 263 261 3 264 2 0 0 0 0 * 0.000 IL 264 264 3 264 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 265 264 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME group-II-D1D4-1 ACC RF01998 DESC Group II catalytic intron D1-D4-1 LENG 84 MAXL 173 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 09:49:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01998/CM NSEQ 237 EFFN 29.961319 CKSUM 3412095367 STATS LOCAL MSV -8.5848 0.71858 STATS LOCAL VITERBI -9.5936 0.71858 STATS LOCAL FORWARD -4.2664 0.71858 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.23450 1.55599 1.18488 1.64893 1.38629 1.38629 1.38629 1.38629 0.00706 5.64959 5.64959 1.46634 0.26236 0.00000 * 1 2.32083 0.62273 2.59012 1.23678 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00706 5.64959 5.64959 1.46634 0.26236 1.09861 0.40547 2 1.00420 2.59737 1.04910 1.56570 2 a - - < 1.38629 1.38629 1.38629 1.38629 0.05517 5.67637 2.99069 1.46634 0.26236 1.09861 0.40547 3 0.66276 1.37772 2.33180 2.00025 3 A - - - 1.38629 1.38629 1.38629 1.38629 0.06525 3.28271 3.66350 0.18165 1.79513 0.53364 0.88302 4 1.89877 0.81711 1.74486 1.45299 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.06427 4.94019 2.89878 0.80780 0.59030 0.30720 1.32993 5 2.10220 0.79151 1.73182 1.39557 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.01117 5.61933 4.89514 1.46634 0.26236 2.02998 0.14080 6 1.53418 1.40392 1.32267 1.30080 8 u - - < 1.38629 1.38629 1.38629 1.38629 0.02486 5.62098 3.86642 1.46634 0.26236 1.78760 0.18315 7 1.21518 1.56427 1.45805 1.34165 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.00734 5.61135 5.61135 1.46634 0.26236 3.06214 0.04792 8 1.86471 1.23239 1.55756 1.07057 10 u - - < 1.38629 1.38629 1.38629 1.38629 0.01542 5.61135 4.45287 1.46634 0.26236 2.23100 0.11364 9 1.35343 1.61536 1.10188 1.55787 11 g - - < 1.38629 1.38629 1.38629 1.38629 0.00736 5.60810 5.60810 1.46634 0.26236 3.10290 0.04596 10 2.41480 1.00232 1.76434 0.98809 12 u - - < 1.38629 1.38629 1.38629 1.38629 0.14226 5.60810 2.04843 1.46634 0.26236 2.43182 0.09198 11 1.14640 1.36331 1.43621 1.66822 13 a - - < 1.38629 1.38629 1.38629 1.38629 0.01748 4.70734 4.79107 0.75858 0.63174 0.29226 1.37270 12 2.31875 4.06563 0.14815 3.81010 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00720 5.63065 5.63065 1.46634 0.26236 0.87022 0.54276 13 1.37860 1.32903 3.09460 0.82544 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00705 5.65096 5.65096 1.46634 0.26236 0.45574 1.00506 14 0.71253 3.62194 0.75055 4.53188 18 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00692 5.67026 5.67026 1.46634 0.26236 1.56410 0.23481 15 0.08783 3.38085 3.48945 3.93494 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.14659 3.90355 2.15257 0.86388 0.54735 0.87691 0.53797 16 2.33803 1.42535 1.05237 1.15852 25 g - - > 1.38629 1.38629 1.38629 1.38629 0.05083 5.55447 3.08582 1.46634 0.26236 0.42306 1.06432 17 1.36716 2.17388 0.73178 1.89458 26 g - - > 1.38629 1.38629 1.38629 1.38629 0.02439 4.21448 4.67620 0.87093 0.54225 3.19444 0.04185 18 1.85559 1.30857 1.33518 1.17014 29 u - - > 1.38629 1.38629 1.38629 1.38629 0.01233 5.59460 4.76346 1.46634 0.26236 2.09638 0.13114 19 1.26275 1.69716 1.10498 1.59600 30 g - - > 1.38629 1.38629 1.38629 1.38629 0.00744 5.59790 5.59790 1.46634 0.26236 3.21995 0.04078 20 1.34197 1.85183 1.33023 1.14790 31 u - - > 1.38629 1.38629 1.38629 1.38629 0.00744 5.59790 5.59790 1.46634 0.26236 1.46539 0.26265 21 1.37023 1.51537 1.18969 1.50549 32 g - - > 1.38629 1.38629 1.38629 1.38629 0.00731 5.61547 5.61547 1.46634 0.26236 1.90289 0.16150 22 1.74167 1.72881 0.68651 1.93832 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.02724 4.92512 3.93193 0.80780 0.59030 0.27238 1.43365 23 1.69119 1.21149 1.12899 1.63686 35 g - - > 1.38629 1.38629 1.38629 1.38629 1.20103 1.30375 0.84955 0.36119 1.19351 0.58846 0.81009 24 0.70454 2.85296 1.02342 2.42331 41 a - - - 1.38629 1.38629 1.38629 1.38629 0.01193 5.12767 5.12767 1.46634 0.26236 0.01597 4.14522 25 2.38276 1.65481 2.38057 0.47148 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 26 2.27140 2.78595 0.33290 2.13437 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 27 0.35534 3.22095 1.79515 2.37468 44 A - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 28 0.89514 2.41906 1.29625 1.47452 45 a - - , 1.38629 1.38629 1.38629 1.38629 0.01038 5.67637 4.97630 1.46634 0.26236 1.09861 0.40547 29 2.28388 0.79335 2.11643 1.12294 46 c - - , 1.38629 1.38629 1.38629 1.38629 0.13465 2.09932 5.67289 1.07733 0.41628 0.68969 0.69661 30 1.35026 1.38023 1.22766 1.62795 54 g - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 31 1.25262 2.22728 0.99512 1.44078 55 g - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 32 1.59435 1.97649 1.11428 1.10789 56 u - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 33 2.50658 0.49009 1.47092 2.57478 57 C - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 34 0.05272 5.44963 3.16674 5.31501 58 A - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 35 4.26921 6.43374 0.01881 5.79667 59 G - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 36 0.18844 3.66256 1.99963 4.53809 60 A - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 37 0.01989 4.51901 5.43501 5.41907 61 A - - , 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 38 2.86237 4.29163 0.07923 5.22929 62 G - - < 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 39 7.16589 6.80905 7.38736 0.00250 63 U - - < 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 40 5.23673 0.04897 5.23482 3.29299 64 C - - < 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 41 0.00717 6.33077 5.86452 5.97992 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 42 5.35608 6.55449 0.00898 5.87819 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 43 5.02719 0.04307 4.30758 3.81069 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 44 0.33553 1.47061 4.34756 3.16253 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01104 5.67637 4.88632 1.46634 0.26236 1.09861 0.40547 45 2.87576 4.58052 0.09187 3.85597 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.00690 5.67224 5.67224 1.46634 0.26236 0.64587 0.74277 46 0.00574 7.10667 5.86816 6.17709 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 47 1.70639 1.77968 0.57067 2.46936 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 48 3.03228 3.49257 0.11357 3.54984 72 G - - < 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 49 3.45879 0.78014 1.60117 1.17594 73 c - - < 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 50 6.05802 0.00905 6.31659 5.32552 74 C - - < 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 51 0.21109 5.16477 1.72338 5.09617 75 A - - - 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 52 3.78787 4.45243 5.09495 0.04126 76 U - - - 1.38629 1.38629 1.38629 1.38629 0.01507 5.67637 4.46287 1.46634 0.26236 1.09861 0.40547 53 0.03264 4.41298 4.30939 5.02825 77 A - - - 1.38629 1.38629 1.38629 1.38629 0.01387 5.66823 4.57341 1.46634 0.26236 0.46644 0.98679 54 3.72165 4.32368 0.05545 4.10461 78 G - - - 1.38629 1.38629 1.38629 1.38629 0.01030 5.66953 4.99098 1.46634 0.26236 1.60717 0.22371 55 4.36380 4.24844 3.88278 0.04878 79 U - - - 1.38629 1.38629 1.38629 1.38629 0.00695 5.66617 5.66617 1.46634 0.26236 1.78502 0.18368 56 0.01724 4.72862 5.48516 5.49541 80 A - - - 1.38629 1.38629 1.38629 1.38629 0.04500 3.31091 4.89010 0.18000 1.80343 0.69019 0.69611 57 2.47381 1.48924 0.45854 2.84750 82 G - - < 1.38629 1.38629 1.38629 1.38629 0.02078 4.62201 4.53455 0.59699 0.79954 1.63782 0.21617 58 2.46330 0.96672 1.76965 1.01026 84 c - - < 1.38629 1.38629 1.38629 1.38629 0.01359 5.66169 4.60338 1.46634 0.26236 1.98147 0.14835 59 2.04719 1.04796 1.33237 1.36102 85 c - - < 1.38629 1.38629 1.38629 1.38629 0.41795 1.25709 2.86251 1.78158 0.18437 2.21210 0.11594 60 1.45130 1.39409 1.08305 1.71973 104 g - - < 1.38629 1.38629 1.38629 1.38629 0.10300 5.60001 2.36261 1.46634 0.26236 2.63237 0.07462 61 1.78327 1.06707 1.53254 1.30229 106 c - - < 1.38629 1.38629 1.38629 1.38629 0.05723 5.50825 2.96481 1.46634 0.26236 2.08255 0.13309 62 1.70460 1.18742 1.39993 1.32225 107 c - - < 1.38629 1.38629 1.38629 1.38629 0.09784 4.82455 2.46303 0.83706 0.56736 1.04455 0.43363 63 1.29350 1.78245 1.35854 1.20254 109 u - - _ 1.38629 1.38629 1.38629 1.38629 0.61692 0.97830 2.47165 1.52558 0.24525 0.18507 1.77815 64 1.64247 2.22483 0.61406 1.84983 137 G - - _ 1.38629 1.38629 1.38629 1.38629 0.15479 5.58068 1.96870 1.46634 0.26236 0.55267 0.85663 65 1.37515 1.64391 1.93804 0.89163 138 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02614 5.50234 3.82915 1.46634 0.26236 1.31545 0.31246 66 0.88710 1.76635 1.28351 1.96517 139 a - - _ 1.38629 1.38629 1.38629 1.38629 0.08972 5.53439 2.50269 1.46634 0.26236 1.09553 0.40701 67 0.50892 1.81684 2.30552 1.99063 140 A - - _ 1.38629 1.38629 1.38629 1.38629 0.19980 5.50712 1.73134 1.46634 0.26236 3.15242 0.04369 68 1.28601 1.51391 1.82992 1.06958 141 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09294 5.32242 2.47847 1.46634 0.26236 1.62783 0.21860 69 1.30240 1.54689 1.05978 1.77974 142 g - - _ 1.38629 1.38629 1.38629 1.38629 0.65264 0.94361 2.40674 0.75073 0.63870 2.04905 0.13795 70 1.39731 1.38418 1.35420 1.41036 151 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01013 5.29028 5.29028 1.46634 0.26236 0.69907 0.68726 71 1.20964 1.37385 1.44817 1.54382 152 a - - _ 1.38629 1.38629 1.38629 1.38629 0.16631 4.13922 1.98570 0.45096 1.01339 0.52961 0.88876 72 1.59557 1.44147 1.01041 1.62680 154 g - - > 1.38629 1.38629 1.38629 1.38629 0.03310 5.48413 3.56101 1.46634 0.26236 1.51876 0.24716 73 1.42521 1.69856 0.98336 1.59680 155 g - - > 1.38629 1.38629 1.38629 1.38629 0.01129 5.50465 4.94004 1.46634 0.26236 0.62128 0.77059 74 2.02796 1.25148 1.22884 1.23897 156 g - - > 1.38629 1.38629 1.38629 1.38629 0.36528 1.19634 5.60001 1.01277 0.45132 0.40437 1.10081 75 1.29893 1.57142 0.93252 2.07252 164 g - - > 1.38629 1.38629 1.38629 1.38629 0.01171 5.65512 4.81064 1.46634 0.26236 1.15379 0.37898 76 1.18396 1.85827 0.81079 2.36994 165 g - - > 1.38629 1.38629 1.38629 1.38629 0.00701 5.65706 5.65706 1.46634 0.26236 0.84723 0.55967 77 3.16086 0.98032 1.38384 1.10321 166 c - - > 1.38629 1.38629 1.38629 1.38629 0.00694 5.66637 5.66637 1.46634 0.26236 1.77541 0.18562 78 2.36489 3.33451 0.15731 4.13680 167 G - - - 1.38629 1.38629 1.38629 1.38629 0.00694 5.66637 5.66637 1.46634 0.26236 0.99933 0.45906 79 0.07066 3.86694 3.96872 3.56130 168 A - - - 1.38629 1.38629 1.38629 1.38629 0.01211 4.75715 5.67042 0.98173 0.46946 1.55388 0.23753 80 0.07105 3.80853 3.57916 3.98983 171 A - - - 1.38629 1.38629 1.38629 1.38629 0.01384 5.67042 4.57560 1.46634 0.26236 0.98927 0.46497 81 3.18232 3.47260 0.10770 3.52059 172 G - - - 1.38629 1.38629 1.38629 1.38629 0.01255 5.66617 4.70896 1.46634 0.26236 0.40885 1.09187 82 5.89308 6.12471 0.00602 6.85492 173 G - - > 1.38629 1.38629 1.38629 1.38629 0.00691 5.67085 5.67085 1.46634 0.26236 0.56980 0.83387 83 1.21908 1.63689 0.76761 3.08356 174 g - - > 1.38629 1.38629 1.38629 1.38629 0.00688 5.67637 5.67637 1.46634 0.26236 1.09861 0.40547 84 3.59381 0.14496 3.30822 2.64695 175 C - - > 1.38629 1.38629 1.38629 1.38629 0.00344 5.67293 * 1.46634 0.26236 0.00000 * //