INFERNAL1/a [1.1.5 | Sep 2023] NAME PISRT1 ACC RF01873 DESC Polled intersex syndrome regulated transcript 1 STATES 325 NODES 109 CLEN 107 W 204 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 6 10:54:51 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01873/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 18 EFFN 2.175293 CKSUM 3072237133 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 78.80 NC 67.40 EFP7GF -6.7071 0.71815 ECMLC 0.59856 -10.53873 -0.39292 1600000 520700 0.002305 ECMGC 0.38695 -13.78192 -3.33590 1600000 22778 0.017561 ECMLI 0.42665 -9.05481 3.98278 1600000 312584 0.003839 ECMGI 0.43808 -2.76197 6.33469 1600000 21515 0.018592 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 204 294 -7.045 -7.252 -0.050 -5.666 IL 1 1 2 1 4 16 54 206 296 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 16 54 206 296 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 16 53 204 295 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 4 2 3 5 3 11 49 201 291 -11.551 -1.585 -0.585 IL 5 5 3 5 3 17 55 210 301 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 15 52 203 293 -5.451 -0.068 -5.451 -0.714 -0.517 -1.062 1.146 D 7 5 3 8 3 11 48 200 290 -11.551 -1.585 -0.585 IL 8 8 3 8 3 17 54 209 300 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 14 51 202 292 -5.451 -0.068 -5.451 -0.828 -0.446 -0.724 1.068 D 10 8 3 11 3 10 47 199 289 -11.551 -1.585 -0.585 IL 11 11 3 11 3 16 53 207 298 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 14 51 200 290 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 13 11 3 14 3 10 46 197 287 -11.551 -1.585 -0.585 IL 14 14 3 14 3 15 52 206 297 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 13 50 199 289 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 16 14 3 17 3 9 46 196 286 -11.551 -1.585 -0.585 IL 17 17 3 17 3 15 52 205 296 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 13 49 198 288 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 19 17 3 20 3 8 45 195 284 -11.551 -1.585 -0.585 IL 20 20 3 20 3 14 51 204 294 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 12 48 197 286 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 22 20 3 23 3 8 44 194 283 -11.551 -1.585 -0.585 IL 23 23 3 23 3 14 50 202 293 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 12 47 195 285 -5.451 -0.068 -5.451 -1.143 -0.546 -1.305 1.297 D 25 23 3 26 3 7 43 192 282 -11.551 -1.585 -0.585 IL 26 26 3 26 3 13 49 201 291 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - a - - - ML 27 26 3 29 3 11 47 194 283 -5.451 -0.068 -5.451 0.607 -0.427 -0.036 -0.399 D 28 26 3 29 3 7 42 191 280 -11.551 -1.585 -0.585 IL 29 29 3 29 3 13 48 200 290 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 11 46 193 282 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 31 29 3 32 3 6 42 190 279 -11.551 -1.585 -0.585 IL 32 32 3 32 3 12 48 199 289 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 10 45 192 281 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 34 32 3 35 3 6 41 188 277 -11.551 -1.585 -0.585 IL 35 35 3 35 3 11 47 197 287 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 9 44 190 279 -5.451 -0.068 -5.451 -1.390 1.365 -1.575 -0.500 D 37 35 3 38 3 5 40 187 276 -11.551 -1.585 -0.585 IL 38 38 3 38 3 11 46 196 286 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 9 43 189 278 -5.451 -0.068 -5.451 -1.019 -0.137 -1.181 1.109 D 40 38 3 41 3 5 39 186 275 -11.551 -1.585 -0.585 IL 41 41 3 41 3 10 45 195 284 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 8 43 188 276 -5.451 -0.068 -5.451 -0.831 -0.967 -1.259 1.327 D 43 41 3 44 3 4 38 185 273 -11.551 -1.585 -0.585 IL 44 44 3 44 3 10 45 194 283 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 45 44 3 47 3 8 42 186 275 -5.451 -0.068 -5.451 -1.342 1.321 -1.526 -0.397 D 46 44 3 47 3 4 38 183 272 -11.551 -1.585 -0.585 IL 47 47 3 47 3 9 44 192 282 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 7 41 185 274 -5.451 -0.068 -5.451 1.227 -1.302 -0.425 -0.978 D 49 47 3 50 3 3 37 182 270 -11.551 -1.585 -0.585 IL 50 50 3 50 3 9 43 191 280 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - a - - - ML 51 50 3 53 3 7 40 184 272 -5.451 -0.068 -5.451 0.947 -0.687 -0.377 -0.553 D 52 50 3 53 3 3 36 181 269 -11.551 -1.585 -0.585 IL 53 53 3 53 3 8 42 190 279 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 54 53 3 56 3 6 40 183 271 -5.451 -0.068 -5.451 -1.398 1.372 -1.584 -0.519 D 55 53 3 56 3 2 35 179 268 -11.551 -1.585 -0.585 IL 56 56 3 56 3 8 41 188 277 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 6 39 181 269 -5.451 -0.068 -5.451 1.182 -1.046 -0.989 -0.428 D 58 56 3 59 3 2 34 178 266 -11.551 -1.585 -0.585 IL 59 59 3 59 3 7 41 187 276 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 60 59 3 62 3 6 38 180 268 -5.451 -0.068 -5.451 -1.102 -0.980 -0.916 1.320 D 61 59 3 62 3 2 34 177 265 -11.551 -1.585 -0.585 IL 62 62 3 62 3 7 40 186 275 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 5 37 179 267 -4.371 -0.107 -5.451 -0.945 -0.905 -0.592 1.191 D 64 62 3 65 3 1 33 176 264 -11.551 -1.585 -0.585 IL 65 65 3 65 3 6 38 179 267 -2.782 -0.228 -10.426 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - A - - - ML 66 65 3 68 3 5 36 178 266 -5.451 -0.068 -5.451 1.396 -1.481 -0.816 -1.178 D 67 65 3 68 3 1 32 175 262 -11.551 -1.585 -0.585 IL 68 68 3 68 3 6 38 184 272 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - A - - - ML 69 68 3 71 3 4 36 176 264 -5.451 -0.068 -5.451 1.279 -0.851 -1.082 -0.871 D 70 68 3 71 3 1 31 173 261 -11.551 -1.585 -0.585 IL 71 71 3 71 3 6 37 182 271 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - G - - - ML 72 71 3 74 3 4 35 175 263 -5.451 -0.068 -5.451 -1.540 -2.211 1.667 -1.924 D 73 71 3 74 3 0 31 172 259 -11.551 -1.585 -0.585 IL 74 74 3 74 3 5 37 181 269 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - G - - - ML 75 74 3 77 3 3 34 174 261 -5.451 -0.068 -5.451 -0.910 -1.857 1.510 -1.541 D 76 74 3 77 3 0 30 171 258 -11.551 -1.585 -0.585 IL 77 77 3 77 3 5 36 180 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 3 33 173 260 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 79 77 3 80 3 0 29 169 256 -11.551 -1.585 -0.585 IL 80 80 3 80 3 4 35 178 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - A - - - ML 81 80 3 83 3 3 33 171 258 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 82 80 3 83 3 0 28 168 255 -11.551 -1.585 -0.585 IL 83 83 3 83 3 4 34 177 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - A - - - ML 84 83 3 86 3 2 32 170 257 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 85 83 3 86 3 0 27 167 254 -11.551 -1.585 -0.585 IL 86 86 3 86 3 4 34 176 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - C - - - ML 87 86 3 89 3 2 31 169 256 -5.451 -0.068 -5.451 -1.670 1.555 -1.851 -1.088 D 88 86 3 89 3 0 27 165 252 -11.551 -1.585 -0.585 IL 89 89 3 89 3 3 33 175 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - U - - - ML 90 89 3 92 3 2 30 167 254 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 91 89 3 92 3 0 26 164 251 -11.551 -1.585 -0.585 IL 92 92 3 92 3 3 32 173 261 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - G - - - ML 93 92 3 95 3 2 30 166 253 -5.451 -0.068 -5.451 -0.748 -1.768 1.456 -1.444 D 94 92 3 95 3 0 25 163 249 -11.551 -1.585 -0.585 IL 95 95 3 95 3 3 31 172 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 96 95 3 98 3 1 29 165 251 -5.451 -0.068 -5.451 -1.670 1.555 -1.851 -1.088 D 97 95 3 98 3 0 24 162 248 -11.551 -1.585 -0.585 IL 98 98 3 98 3 2 31 171 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - A - - - ML 99 98 3 101 3 1 28 163 250 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 100 98 3 101 3 0 24 160 246 -11.551 -1.585 -0.585 IL 101 101 3 101 3 2 30 169 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 102 101 3 104 3 1 27 162 248 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 103 101 3 104 3 0 23 159 245 -11.551 -1.585 -0.585 IL 104 104 3 104 3 2 29 168 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - A - - - ML 105 104 3 107 3 1 27 161 247 -5.451 -0.068 -5.451 1.380 -1.461 -0.775 -1.155 D 106 104 3 107 3 0 22 158 243 -11.551 -1.585 -0.585 IL 107 107 3 107 3 2 28 167 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - C - - - ML 108 107 3 110 3 1 26 159 245 -5.451 -0.068 -5.451 -1.405 1.378 -1.591 -0.533 D 109 107 3 110 3 0 21 156 242 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 28 166 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - A - - - ML 111 110 3 113 3 1 25 158 244 -5.451 -0.068 -5.451 1.378 -1.458 -0.769 -1.152 D 112 110 3 113 3 0 21 155 241 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 27 164 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 114 113 3 116 3 1 24 157 243 -5.451 -0.068 -5.451 -1.111 -0.456 -1.273 1.259 D 115 113 3 116 3 0 20 154 239 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 26 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - A - - - ML 117 116 3 119 3 1 24 156 241 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 118 116 3 119 3 0 19 152 238 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 25 162 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 120 119 3 122 3 1 23 154 240 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 121 119 3 122 3 0 19 151 236 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 25 160 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - U - - - ML 123 122 3 125 3 1 22 153 238 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 124 122 3 125 3 0 18 150 235 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 24 159 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - G - - - ML 126 125 3 128 3 1 22 152 237 -5.451 -0.068 -5.451 -1.540 -2.211 1.667 -1.924 D 127 125 3 128 3 0 17 148 233 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 23 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - U - - - ML 129 128 3 131 3 1 21 150 235 -5.451 -0.068 -5.451 -0.887 -0.534 -0.802 1.134 D 130 128 3 131 3 0 16 147 232 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 23 156 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - U - - - ML 132 131 3 134 3 1 20 149 234 -5.451 -0.068 -5.451 -1.068 -0.323 -1.230 1.200 D 133 131 3 134 3 0 16 146 230 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 22 155 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - G - - - ML 135 134 3 137 3 1 19 148 232 -5.451 -0.068 -5.451 -0.456 -0.661 1.029 -0.741 D 136 134 3 137 3 0 15 144 229 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 21 154 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 138 137 3 140 3 1 19 146 231 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 139 137 3 140 3 0 14 143 227 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 20 152 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 48 - A - - - ML 141 140 3 143 3 1 18 145 229 -5.451 -0.068 -5.451 1.130 -1.231 -0.236 -0.897 D 142 140 3 143 3 0 14 142 226 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 20 151 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - A - - - ML 144 143 3 146 3 1 17 144 228 -5.451 -0.068 -5.451 1.028 -1.177 -0.061 -0.836 D 145 143 3 146 3 0 13 140 224 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 19 150 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 147 146 3 149 3 1 16 142 226 -5.451 -0.068 -5.451 -1.043 -1.492 1.379 -0.839 D 148 146 3 149 3 0 12 139 223 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 18 148 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - A - - - ML 150 149 3 152 3 1 16 141 225 -5.451 -0.068 -5.451 1.220 -0.727 -1.026 -0.796 D 151 149 3 152 3 0 12 138 221 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 17 147 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - A - - - ML 153 152 3 155 3 1 15 139 223 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 154 152 3 155 3 0 11 136 220 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 17 146 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - A - - - ML 156 155 3 158 3 1 14 138 222 -5.451 -0.068 -5.451 1.290 -1.359 -0.558 -1.042 D 157 155 3 158 3 0 10 135 218 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 16 144 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - A - - - ML 159 158 3 161 3 1 14 137 220 -5.451 -0.068 -5.451 1.273 -1.148 -1.075 -0.606 D 160 158 3 161 3 0 10 134 217 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 15 143 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 55 - u - - - ML 162 161 3 164 3 1 13 135 219 -5.451 -0.068 -5.451 -0.731 -0.818 0.014 0.865 D 163 161 3 164 3 0 9 132 215 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 14 142 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 56 - A - - - ML 165 164 3 167 3 1 12 134 217 -5.451 -0.068 -5.451 1.199 -1.063 -1.003 -0.460 D 166 164 3 167 3 0 8 131 214 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 14 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - A - - - ML 168 167 3 170 3 1 11 133 216 -5.451 -0.068 -5.451 1.199 -1.063 -1.003 -0.460 D 169 167 3 170 3 0 8 130 212 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 13 139 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - A - - - ML 171 170 3 173 3 1 10 131 214 -5.451 -0.160 -3.610 1.381 -1.461 -0.776 -1.156 D 172 170 3 173 3 0 7 129 211 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 12 138 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - A - - - ML 174 173 3 176 3 1 10 130 213 -5.363 -0.072 -5.363 1.081 -0.542 -0.856 -0.632 D 175 173 3 176 3 0 6 128 210 -12.447 -0.640 -1.482 IL 176 176 3 176 3 1 12 136 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - G - - - ML 177 176 3 179 3 1 9 129 211 -5.451 -0.068 -5.451 -0.778 -1.784 1.466 -1.461 D 178 176 3 179 3 0 5 125 207 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 11 135 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - G - - - ML 180 179 3 182 3 1 9 127 209 -5.451 -0.068 -5.451 -0.676 -1.320 1.245 -0.729 D 181 179 3 182 3 0 4 124 206 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 10 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - U - - - ML 183 182 3 185 3 1 8 126 208 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 184 182 3 185 3 0 4 123 204 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 10 132 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - a - - - ML 186 185 3 188 3 1 8 124 206 -5.451 -0.068 -5.451 0.990 -0.895 -0.549 -0.336 D 187 185 3 188 3 0 3 121 203 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 9 131 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - C - - - ML 189 188 3 191 3 1 7 123 205 -5.451 -0.068 -5.451 -0.955 1.028 -0.817 -0.188 D 190 188 3 191 3 0 3 120 201 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 9 130 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - u - - - ML 192 191 3 194 3 1 6 122 203 -5.451 -0.068 -5.451 -0.323 -0.458 -0.174 0.666 D 193 191 3 194 3 0 2 118 199 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 8 128 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - U - - - ML 195 194 3 197 3 1 6 120 202 -3.568 -0.164 -5.451 -1.119 -0.479 -1.281 1.269 D 196 194 3 197 3 0 1 117 198 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 7 124 205 -0.485 -1.810 -13.235 0.000 0.000 0.000 0.000 [ MATL 66 ] 72 - c - - - ML 198 197 3 200 3 1 5 119 200 -5.451 -0.068 -5.451 -0.983 0.640 -1.148 0.570 D 199 197 3 200 3 0 1 115 196 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 7 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 73 - U - - - ML 201 200 3 203 3 1 5 117 198 -5.451 -0.068 -5.451 -1.170 -0.613 -1.331 1.325 D 202 200 3 203 3 0 0 114 194 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 6 124 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 74 - C - - - ML 204 203 3 206 3 1 4 116 197 -5.451 -0.068 -5.451 -1.299 1.350 -1.027 -0.851 D 205 203 3 206 3 0 0 112 193 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 6 122 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 75 - a - - - ML 207 206 3 209 3 1 3 114 195 -5.451 -0.103 -4.436 0.529 -0.386 -0.115 -0.202 D 208 206 3 209 3 0 0 111 191 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 5 121 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 76 - G - - - ML 210 209 3 212 3 1 4 113 193 -5.417 -0.069 -5.417 -0.620 -1.025 1.227 -0.951 D 211 209 3 212 3 0 0 109 189 -11.974 -2.008 -0.413 IL 212 212 3 212 3 1 5 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 77 - G - - - ML 213 212 3 215 3 1 3 111 192 -4.337 -0.109 -5.417 -0.357 -0.823 1.044 -0.757 D 214 212 3 215 3 0 0 108 188 -11.974 -2.008 -0.413 IL 215 215 3 215 3 1 5 114 195 -0.569 -1.618 -11.816 0.000 0.000 0.000 0.000 [ MATL 72 ] 81 - C - - - ML 216 215 3 218 3 1 3 110 190 -5.417 -0.069 -5.417 -0.942 1.026 -0.828 -0.185 D 217 215 3 218 3 0 0 106 186 -11.974 -2.008 -0.413 IL 218 218 3 218 3 1 4 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 82 - U - - - ML 219 218 3 221 3 1 3 109 189 -5.417 -0.069 -5.417 -1.383 -1.104 -1.526 1.488 D 220 218 3 221 3 0 0 105 184 -11.974 -2.008 -0.413 IL 221 221 3 221 3 1 4 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 83 - U - - - ML 222 221 3 224 3 1 2 107 187 -5.417 -0.069 -5.417 -1.044 -0.934 -0.852 1.286 D 223 221 3 224 3 0 0 104 183 -11.974 -2.008 -0.413 IL 224 224 3 224 3 1 4 114 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 84 - U - - - ML 225 224 3 227 3 1 2 106 185 -5.417 -0.069 -5.417 -0.996 -0.192 -1.155 1.120 D 226 224 3 227 3 0 0 102 182 -11.974 -2.008 -0.413 IL 227 227 3 227 3 1 3 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 85 - a - - - ML 228 227 3 230 3 1 2 104 184 -5.417 -0.069 -5.417 0.860 -0.502 -0.401 -0.470 D 229 227 3 230 3 0 0 102 181 -11.974 -0.993 -1.008 IL 230 230 3 230 3 1 3 111 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 86 - G - - - ML 231 230 3 233 3 1 1 103 182 -5.451 -0.068 -5.451 -1.540 -2.211 1.667 -1.924 D 232 230 3 233 3 0 0 99 178 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 2 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 87 - U - - - ML 234 233 3 236 3 1 1 101 180 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 235 233 3 236 3 0 0 98 177 -11.551 -1.585 -0.585 IL 236 236 3 236 3 1 2 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 88 - C - - - ML 237 236 3 239 3 1 1 100 179 -5.451 -0.068 -5.451 -1.670 1.555 -1.851 -1.088 D 238 236 3 239 3 0 0 96 175 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 2 107 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 89 - U - - - ML 240 239 3 242 3 1 1 98 177 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 241 239 3 242 3 0 0 95 173 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 90 - G - - - ML 243 242 3 245 3 1 1 97 175 -5.451 -0.068 -5.451 -1.540 -2.211 1.667 -1.924 D 244 242 3 245 3 0 0 93 171 -11.551 -1.585 -0.585 IL 245 245 3 245 3 1 1 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 91 - C - - - ML 246 245 3 248 3 1 1 95 173 -5.451 -0.068 -5.451 -1.670 1.555 -1.851 -1.088 D 247 245 3 248 3 0 0 92 170 -11.551 -1.585 -0.585 IL 248 248 3 248 3 1 1 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 92 - A - - - ML 249 248 3 251 3 1 1 94 172 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 250 248 3 251 3 0 0 90 168 -11.551 -1.585 -0.585 IL 251 251 3 251 3 1 1 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 93 - A - - - ML 252 251 3 254 3 1 1 92 170 -5.451 -0.068 -5.451 1.398 -1.483 -0.821 -1.180 D 253 251 3 254 3 0 0 89 166 -11.551 -1.585 -0.585 IL 254 254 3 254 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 94 - U - - - ML 255 254 3 257 3 1 1 91 168 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 256 254 3 257 3 0 0 87 164 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 95 - A - - - ML 258 257 3 260 3 1 1 89 166 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 259 257 3 260 3 0 0 86 162 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 96 - A - - - ML 261 260 3 263 3 1 1 88 164 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 262 260 3 263 3 0 0 84 160 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 95 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 97 - C - - - ML 264 263 3 266 3 1 1 86 163 -5.451 -0.068 -5.451 -1.670 1.555 -1.851 -1.088 D 265 263 3 266 3 0 0 82 159 -11.551 -1.585 -0.585 IL 266 266 3 266 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 98 - U - - - ML 267 266 3 269 3 1 1 85 161 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 268 266 3 269 3 0 0 81 157 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 99 - U - - - ML 270 269 3 272 3 1 1 83 159 -5.451 -0.068 -5.451 -1.443 -1.154 -1.591 1.511 D 271 269 3 272 3 0 0 79 155 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 100 - A - - - ML 273 272 3 275 3 1 1 81 157 -5.451 -0.103 -4.439 1.627 -1.898 -1.635 -1.643 D 274 272 3 275 3 0 0 78 153 -11.551 -1.585 -0.585 IL 275 275 3 275 3 1 1 89 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 101 - a - - - ML 276 275 3 278 3 1 1 80 155 -5.417 -0.069 -5.417 0.906 -0.651 -0.339 -0.517 D 277 275 3 278 3 0 0 76 151 -11.972 -0.994 -1.006 IL 278 278 3 278 3 1 1 87 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 102 - A - - - ML 279 278 3 281 3 1 1 78 153 -5.451 -0.068 -5.451 1.260 -0.810 -1.063 -0.846 D 280 278 3 281 3 0 0 74 149 -11.551 -1.585 -0.585 IL 281 281 3 281 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 103 - G - - - ML 282 281 3 284 3 1 1 76 151 -5.451 -0.068 -5.451 -1.540 -2.211 1.667 -1.924 D 283 281 3 284 3 0 0 72 147 -11.551 -1.585 -0.585 IL 284 284 3 284 3 1 1 84 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 104 - A - - - ML 285 284 3 287 3 1 1 75 149 -5.451 -0.068 -5.451 1.397 -1.482 -0.820 -1.180 D 286 284 3 287 3 0 0 71 144 -11.551 -1.585 -0.585 IL 287 287 3 287 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 96 ] 105 - A - - - ML 288 287 3 290 3 1 1 73 147 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 289 287 3 290 3 0 0 69 142 -11.551 -1.585 -0.585 IL 290 290 3 290 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 97 ] 106 - A - - - ML 291 290 3 293 3 1 1 71 145 -5.451 -0.068 -5.451 1.344 -1.417 -0.685 -1.107 D 292 290 3 293 3 0 0 67 140 -11.551 -1.585 -0.585 IL 293 293 3 293 3 1 1 79 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 98 ] 107 - a - - - ML 294 293 3 296 3 1 1 69 142 -5.451 -0.068 -5.451 0.956 -0.238 -0.876 -0.583 D 295 293 3 296 3 0 0 65 138 -11.551 -1.585 -0.585 IL 296 296 3 296 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 99 ] 108 - G - - - ML 297 296 3 299 3 1 1 67 140 -5.451 -0.068 -5.451 -0.241 -1.489 1.230 -1.144 D 298 296 3 299 3 0 0 63 135 -11.551 -1.585 -0.585 IL 299 299 3 299 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 100 ] 109 - G - - - ML 300 299 3 302 3 1 1 65 138 -5.451 -0.068 -5.451 -0.943 -1.875 1.520 -1.561 D 301 299 3 302 3 0 0 61 133 -11.551 -1.585 -0.585 IL 302 302 3 302 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 101 ] 110 - A - - - ML 303 302 3 305 3 1 1 63 135 -5.451 -0.068 -5.451 1.627 -1.898 -1.635 -1.643 D 304 302 3 305 3 0 0 58 130 -11.551 -1.585 -0.585 IL 305 305 3 305 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 102 ] 111 - C - - - ML 306 305 3 308 3 1 1 61 133 -5.451 -0.068 -5.451 -1.670 1.555 -1.851 -1.088 D 307 305 3 308 3 0 0 56 127 -11.551 -1.585 -0.585 IL 308 308 3 308 3 1 1 70 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 103 ] 112 - C - - - ML 309 308 3 311 3 1 1 59 130 -5.451 -0.068 -5.451 -1.261 1.235 -1.440 -0.216 D 310 308 3 311 3 0 0 53 123 -11.551 -1.585 -0.585 IL 311 311 3 311 3 1 1 69 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 104 ] 113 - C - - - ML 312 311 3 314 3 1 1 56 127 -5.451 -0.068 -5.451 -1.271 1.247 -1.451 -0.239 D 313 311 3 314 3 0 0 50 120 -11.551 -1.585 -0.585 IL 314 314 3 314 3 1 1 66 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 105 ] 114 - A - - - ML 315 314 3 317 3 1 1 53 123 -5.451 -0.068 -5.451 1.344 -1.417 -0.685 -1.107 D 316 314 3 317 3 0 0 45 114 -11.551 -1.585 -0.585 IL 317 317 3 317 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 106 ] 115 - G - - - ML 318 317 3 320 3 1 1 49 118 -5.451 -0.068 -5.451 -1.096 -1.252 1.433 -1.278 D 319 317 3 320 3 0 0 32 101 -11.551 -1.585 -0.585 IL 320 320 3 320 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 107 ] 116 - a - - - ML 321 320 3 323 2 1 1 1 1 * 0.000 0.799 -1.122 0.280 -0.771 D 322 320 3 323 2 0 0 0 0 * 0.000 IL 323 323 3 323 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 108 ] - - - - - - E 324 323 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PISRT1 ACC RF01873 DESC Polled intersex syndrome regulated transcript 1 LENG 107 MAXL 204 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sat Jul 6 10:54:51 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01873/CM NSEQ 18 EFFN 2.175293 CKSUM 3072237133 STATS LOCAL MSV -8.6893 0.71815 STATS LOCAL VITERBI -10.5471 0.71815 STATS LOCAL FORWARD -2.9202 0.71815 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.17392 1.61418 1.57269 1.25769 1.38629 1.38629 1.38629 1.38629 0.02824 4.88343 3.89825 0.39730 1.11515 0.00000 * 1 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 2 1.88140 1.74493 2.12219 0.59204 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 3 1.96040 1.69523 1.88779 0.64581 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 4 0.25829 2.70178 2.51940 2.52525 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 5 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 6 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 7 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 8 2.17890 1.76454 2.29068 0.48716 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 9 0.96565 1.68239 1.41152 1.66305 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 10 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 11 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 12 2.34948 0.44031 2.47785 1.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 13 2.09269 1.48151 2.20521 0.61781 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 14 1.96253 2.05673 2.25914 0.46651 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 15 2.31667 0.47056 2.44374 1.66120 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 16 0.53549 2.28881 1.68054 2.06390 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 17 0.73007 1.86254 1.64793 1.76960 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 18 2.35558 0.43501 2.48415 1.74581 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 19 0.56726 2.11102 2.07155 1.68299 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 20 2.15042 2.06550 2.02141 0.47106 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 21 2.04119 2.01375 1.79677 0.56071 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07385 3.02970 3.77856 0.15724 1.92758 1.09861 0.40547 22 0.41863 2.41258 1.95219 2.20268 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 23 0.49993 1.97607 2.13600 1.99006 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 24 2.45374 2.91886 0.23048 2.71986 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 25 2.01695 2.67342 0.33966 2.45440 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 26 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 27 0.25829 2.70178 2.51940 2.52525 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 28 0.25829 2.70178 2.51940 2.52525 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 29 2.54371 0.30856 2.66913 2.14040 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 30 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 31 1.90506 2.61158 0.37710 2.38686 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 32 2.54371 0.30856 2.66913 2.14040 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 33 0.25829 2.70178 2.51940 2.52525 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 34 0.25829 2.70178 2.51940 2.52525 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 35 0.42942 2.39878 1.92377 2.18722 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 36 2.36005 0.43117 2.48877 1.75546 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 37 0.43106 2.39673 1.91951 2.18493 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 38 2.15622 1.70236 2.26834 0.51333 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 39 0.25829 2.70178 2.51940 2.52525 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 40 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 41 2.38670 2.18640 2.48878 0.33865 - 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A - - : 1.38629 1.38629 1.38629 1.38629 0.11068 3.77856 2.50199 1.46634 0.26236 1.09861 0.40547 58 0.63697 1.76217 1.97973 1.82432 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04980 3.71768 3.71768 1.46634 0.26236 0.44339 1.02682 59 1.92574 2.62300 0.36981 2.39931 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 60 1.85512 2.30123 0.52329 1.89139 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 61 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 62 0.69990 2.00634 1.76682 1.61945 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 63 2.04806 0.67405 1.95273 1.51646 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 64 1.61046 1.70372 1.50662 0.92498 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 65 2.16182 1.71829 2.27387 0.50650 - U - - : 1.38629 1.38629 1.38629 1.38629 0.11338 2.47302 3.77856 1.25450 0.33578 1.09861 0.40547 66 2.06739 0.94249 2.18197 0.99153 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 67 2.19749 1.81141 2.30888 0.46821 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 68 2.28657 0.45086 2.09784 1.97626 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 69 1.01979 1.65415 1.46627 1.52653 - a - - : 1.38629 1.38629 1.38629 1.38629 0.07154 3.77856 3.07503 1.46634 0.26236 1.09861 0.40547 70 1.81632 2.09691 0.53580 2.04529 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75495 3.75495 1.46634 0.26236 1.39150 0.28595 71 1.63406 1.95661 0.66242 1.91105 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07568 3.00610 3.75495 1.12106 0.39443 1.39150 0.28595 72 2.03950 0.67492 1.96033 1.51459 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75495 3.75495 1.46634 0.26236 1.39150 0.28595 73 2.34489 2.15155 2.44424 0.35518 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75495 3.75495 1.46634 0.26236 1.39150 0.28595 74 2.11004 2.03391 1.97674 0.49524 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75495 3.75495 1.46634 0.26236 1.39150 0.28595 75 2.07682 1.51910 2.18690 0.60973 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75495 3.75495 1.46634 0.26236 1.39150 0.28595 76 0.79052 1.73401 1.66436 1.71199 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04793 3.75495 3.75495 1.46634 0.26236 0.68797 0.69835 77 2.45374 2.91886 0.23048 2.71986 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 78 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 79 2.54371 0.30856 2.66913 2.14040 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 80 2.38670 2.18640 2.48878 0.33865 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04679 3.77856 3.77856 1.46634 0.26236 1.09861 0.40547 81 2.45374 2.91886 0.23048 2.71986 - 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