INFERNAL1/a [1.1.5 | Sep 2023] NAME MALAT1 ACC RF01871 DESC Metastasis associated lung adenocarcinoma transcript 1 STATES 289 NODES 97 CLEN 95 W 188 ALPH RNA RF no CONS yes MAP yes DATE Fri Jul 12 21:50:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01871/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 17 EFFN 2.718506 CKSUM 3486338249 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 70.30 NC 69.50 EFP7GF -6.3274 0.71832 ECMLC 0.58748 -10.36909 -0.04798 1600000 515828 0.002326 ECMGC 0.36021 -14.34359 -2.54908 1600000 27999 0.014286 ECMLI 0.41862 -9.43500 3.67612 1600000 290280 0.004134 ECMGI 0.41595 -4.01985 6.05118 1600000 26385 0.015160 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 188 277 -7.240 -7.447 -0.095 -4.275 IL 1 1 2 1 4 13 46 190 279 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 12 46 189 278 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 12 46 188 277 -5.576 -0.062 -5.576 -0.905 -1.101 -1.416 1.392 D 4 2 3 5 3 8 41 184 273 -12.131 -2.166 -0.364 IL 5 5 3 5 3 14 47 194 284 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 12 45 187 276 -5.576 -0.062 -5.576 1.165 -1.079 -1.068 -0.309 D 7 5 3 8 3 8 41 184 272 -12.131 -2.166 -0.364 IL 8 8 3 8 3 13 47 192 282 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 11 44 185 274 -5.576 -0.098 -4.485 1.706 -2.197 -1.937 -1.951 D 10 8 3 11 3 8 40 183 272 -12.131 -0.852 -1.166 IL 11 11 3 11 3 13 46 191 281 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 11 43 184 273 -5.587 -0.061 -5.587 -0.721 -0.294 -0.391 0.860 D 13 11 3 14 3 7 39 181 269 -12.012 -2.046 -0.400 IL 14 14 3 14 3 12 45 190 280 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 11 43 183 272 -3.755 -0.144 -5.587 -0.734 -1.940 1.491 -1.612 D 16 14 3 17 3 6 38 180 268 -12.012 -2.046 -0.400 IL 17 17 3 17 3 11 43 183 272 -3.818 -0.107 -11.462 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - A - - - ML 18 17 3 20 3 10 42 182 271 -5.587 -0.061 -5.587 1.712 -2.223 -1.964 -1.979 D 19 17 3 20 3 6 38 178 267 -12.012 -2.046 -0.400 IL 20 20 3 20 3 12 44 188 277 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - A - - - ML 21 20 3 23 3 10 41 181 269 -5.587 -0.061 -5.587 1.712 -2.223 -1.964 -1.979 D 22 20 3 23 3 6 37 178 266 -12.012 -2.046 -0.400 IL 23 23 3 23 3 11 43 186 276 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - U - - - ML 24 23 3 26 3 9 40 179 268 -5.587 -0.061 -5.587 -1.236 -0.376 -1.411 1.280 D 25 23 3 26 3 5 37 177 265 -12.012 -0.956 -1.046 IL 26 26 3 26 3 10 42 185 274 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - U - - - ML 27 26 3 29 3 9 39 178 266 -3.613 -0.155 -5.620 -1.078 -1.051 -0.587 1.250 D 28 26 3 29 3 4 35 175 263 -11.551 -1.585 -0.585 IL 29 29 3 29 3 9 40 178 266 -4.036 -0.091 -11.680 0.000 0.000 0.000 0.000 [ MATL 10 ] 12 - G - - - ML 30 29 3 32 3 8 39 177 265 -5.620 -0.060 -5.620 -0.988 -1.330 1.182 -0.271 D 31 29 3 32 3 4 35 174 262 -11.551 -1.585 -0.585 IL 32 32 3 32 3 9 40 183 272 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - A - - - ML 33 32 3 35 3 7 38 176 264 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 34 32 3 35 3 4 34 173 261 -11.551 -1.585 -0.585 IL 35 35 3 35 3 9 39 182 271 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - U - - - ML 36 35 3 38 3 7 37 174 263 -5.620 -0.060 -5.620 -1.760 -1.417 -1.924 1.617 D 37 35 3 38 3 3 33 171 259 -11.551 -1.585 -0.585 IL 38 38 3 38 3 8 39 180 269 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - G - - - ML 39 38 3 41 3 6 36 173 261 -5.620 -0.060 -5.620 -1.129 -1.589 1.385 -0.740 D 40 38 3 41 3 3 33 170 258 -11.551 -1.585 -0.585 IL 41 41 3 41 3 7 38 179 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - A - - - ML 42 41 3 44 3 5 35 172 260 -5.620 -0.060 -5.620 1.209 -1.138 -1.139 -0.359 D 43 41 3 44 3 2 32 169 257 -11.551 -1.585 -0.585 IL 44 44 3 44 3 7 37 178 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - G - - - ML 45 44 3 47 3 5 34 171 259 -5.620 -0.155 -3.613 -0.500 -1.296 1.150 -0.587 D 46 44 3 47 3 2 31 168 256 -11.551 -1.585 -0.585 IL 47 47 3 47 3 6 36 177 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - a - - - ML 48 47 3 50 3 4 34 170 257 -5.529 -0.064 -5.529 0.973 -0.678 -0.425 -0.583 D 49 47 3 50 3 2 31 167 254 -12.556 -0.583 -1.590 IL 50 50 3 50 3 5 35 175 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - A - - - ML 51 50 3 53 3 4 33 168 256 -2.103 -0.565 -3.458 1.090 -0.749 -0.602 -0.696 D 52 50 3 53 3 1 29 161 246 -11.551 -1.585 -0.585 IL 53 53 3 53 3 6 35 173 261 -0.332 -2.282 -15.641 0.000 0.000 0.000 0.000 [ MATL 18 ] 32 - a - - - ML 54 53 3 56 3 4 32 163 248 -5.514 -0.065 -5.514 0.661 -0.827 -0.823 0.368 D 55 53 3 56 3 1 28 160 245 -12.661 -1.343 -0.724 IL 56 56 3 56 3 5 34 169 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 33 - U - - - ML 57 56 3 59 3 3 31 161 246 -5.563 -0.062 -5.563 -0.414 -0.959 -1.139 1.190 D 58 56 3 59 3 0 28 159 244 -12.266 -0.752 -1.300 IL 59 59 3 59 3 4 33 168 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 34 - a - - - ML 60 59 3 62 3 3 31 160 245 -5.620 -0.060 -5.620 0.627 -0.499 -0.116 -0.276 D 61 59 3 62 3 0 26 157 242 -11.551 -1.585 -0.585 IL 62 62 3 62 3 4 32 166 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 35 - C - - - ML 63 62 3 65 3 3 30 159 244 -5.620 -0.060 -5.620 -0.838 1.226 -0.924 -0.800 D 64 62 3 65 3 0 25 156 240 -11.551 -1.585 -0.585 IL 65 65 3 65 3 4 32 165 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 36 - A - - - ML 66 65 3 68 3 2 29 157 242 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 67 65 3 68 3 0 25 154 239 -11.551 -1.585 -0.585 IL 68 68 3 68 3 3 31 164 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 37 - A - - - ML 69 68 3 71 3 2 28 156 241 -5.620 -0.060 -5.620 1.303 -1.491 -0.453 -1.163 D 70 68 3 71 3 0 24 153 237 -11.551 -1.585 -0.585 IL 71 71 3 71 3 3 30 162 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 38 - U - - - ML 72 71 3 74 3 2 28 155 239 -5.620 -0.060 -5.620 -1.251 -0.298 -1.429 1.260 D 73 71 3 74 3 0 23 152 236 -11.551 -1.585 -0.585 IL 74 74 3 74 3 3 29 161 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 39 - G - - - ML 75 74 3 77 3 2 27 154 238 -5.620 -0.060 -5.620 -1.806 -2.586 1.742 -2.303 D 76 74 3 77 3 0 22 150 234 -11.551 -1.585 -0.585 IL 77 77 3 77 3 3 29 160 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 40 - A - - - ML 78 77 3 80 3 1 26 152 236 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 79 77 3 80 3 0 22 149 233 -11.551 -1.585 -0.585 IL 80 80 3 80 3 2 28 159 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 41 - A - - - ML 81 80 3 83 3 1 25 151 235 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 82 80 3 83 3 0 21 148 231 -11.551 -1.585 -0.585 IL 83 83 3 83 3 2 27 157 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 42 - G - - - ML 84 83 3 86 3 1 25 150 233 -5.620 -0.060 -5.620 -1.806 -2.586 1.742 -2.303 D 85 83 3 86 3 0 20 146 230 -11.551 -1.585 -0.585 IL 86 86 3 86 3 2 26 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 43 - A - - - ML 87 86 3 89 3 1 24 148 232 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 88 86 3 89 3 0 20 145 229 -11.551 -1.585 -0.585 IL 89 89 3 89 3 2 26 155 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 44 - u - - - ML 90 89 3 92 3 1 23 147 230 -5.620 -0.060 -5.620 -0.811 -0.975 0.539 0.554 D 91 89 3 92 3 0 19 144 227 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 25 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 45 - c - - - ML 93 92 3 95 3 1 23 146 229 -5.620 -0.060 -5.620 -0.116 0.713 -0.453 -0.499 D 94 92 3 95 3 0 18 143 226 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 24 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 46 - a - - - ML 96 95 3 98 3 1 22 144 228 -5.620 -0.060 -5.620 0.681 -0.197 -0.327 -0.460 D 97 95 3 98 3 0 17 141 224 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 24 151 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 47 - A - - - ML 99 98 3 101 3 1 21 143 226 -4.275 -0.108 -5.620 1.467 -1.695 -0.878 -1.388 D 100 98 3 101 3 0 17 140 223 -11.551 -1.585 -0.585 IL 101 101 3 101 3 2 22 143 226 -3.172 -0.171 -10.816 0.000 0.000 0.000 0.000 [ MATL 34 ] 49 - A - - - ML 102 101 3 104 3 1 21 142 225 -5.620 -0.060 -5.620 1.362 -1.554 -0.593 -1.233 D 103 101 3 104 3 0 16 139 222 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 22 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 50 - U - - - ML 105 104 3 107 3 1 20 141 224 -5.620 -0.060 -5.620 -0.536 -1.041 -1.256 1.266 D 106 104 3 107 3 0 15 137 220 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 21 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 51 - g - - - ML 108 107 3 110 3 1 19 139 222 -5.620 -0.060 -5.620 -0.190 -1.147 0.964 -0.471 D 109 107 3 110 3 0 15 136 219 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 21 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 52 - U - - - ML 111 110 3 113 3 1 18 138 221 -5.620 -0.060 -5.620 -0.820 -1.118 -1.411 1.377 D 112 110 3 113 3 0 14 135 217 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 20 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 53 - C - - - ML 114 113 3 116 3 1 18 137 219 -5.620 -0.060 -5.620 -1.430 1.253 -1.623 -0.118 D 115 113 3 116 3 0 13 133 216 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 19 143 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 54 - C - - - ML 117 116 3 119 3 1 17 135 218 -5.620 -0.060 -5.620 -1.094 1.470 -1.780 -1.089 D 118 116 3 119 3 0 13 132 214 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 19 142 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 55 - A - - - ML 120 119 3 122 3 1 16 134 216 -5.620 -0.060 -5.620 1.303 -1.491 -0.453 -1.163 D 121 119 3 122 3 0 12 131 213 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 18 141 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 56 - U - - - ML 123 122 3 125 3 1 15 133 215 -5.620 -0.060 -5.620 -1.211 -0.146 -1.387 1.190 D 124 122 3 125 3 0 12 129 211 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 17 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 57 - C - - - ML 126 125 3 128 3 1 15 131 213 -5.620 -0.060 -5.620 -2.016 1.657 -2.220 -1.381 D 127 125 3 128 3 0 11 128 210 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 16 138 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 58 - U - - - ML 129 128 3 131 3 1 14 130 212 -5.620 -0.060 -5.620 -0.218 -0.965 -1.101 1.112 D 130 128 3 131 3 0 10 127 208 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 15 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 59 - C - - - ML 132 131 3 134 3 1 13 129 210 -5.620 -0.108 -4.275 -2.016 1.657 -2.220 -1.381 D 133 131 3 134 3 0 10 126 207 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 15 135 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 60 - a - - - ML 135 134 3 137 3 1 12 127 209 -5.574 -0.110 -4.261 0.735 -0.350 -0.280 -0.459 D 136 134 3 137 3 0 9 125 206 -12.149 -2.183 -0.359 IL 137 137 3 137 3 1 14 134 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 61 - A - - - ML 138 137 3 140 3 1 11 126 207 -4.176 -0.174 -4.099 1.678 -2.081 -1.821 -1.832 D 139 137 3 140 3 0 9 124 205 -12.557 -0.582 -1.592 IL 140 140 3 140 3 1 12 126 207 -3.182 -0.169 -10.826 0.000 0.000 0.000 0.000 [ MATL 47 ] 63 - A - - - ML 141 140 3 143 3 1 11 125 206 -5.570 -0.124 -4.022 1.702 -2.181 -1.922 -1.935 D 142 140 3 143 3 0 8 122 203 -12.197 -2.231 -0.346 IL 143 143 3 143 3 1 13 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 64 - A - - - ML 144 143 3 146 3 1 11 124 205 -5.510 -0.065 -5.510 1.312 -1.213 -1.160 -0.648 D 145 143 3 146 3 0 7 121 202 -12.692 -0.519 -1.726 IL 146 146 3 146 3 1 12 130 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 65 - U - - - ML 147 146 3 149 3 1 10 122 203 -5.620 -0.060 -5.620 -0.701 -0.559 -1.157 1.175 D 148 146 3 149 3 0 6 119 199 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 12 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 66 - a - - - ML 150 149 3 152 3 1 9 121 202 -5.620 -0.060 -5.620 0.639 -0.650 0.157 -0.534 D 151 149 3 152 3 0 5 118 198 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 11 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 67 - C - - - ML 153 152 3 155 3 1 9 119 200 -5.620 -0.060 -5.620 -2.016 1.657 -2.220 -1.381 D 154 152 3 155 3 0 4 116 196 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 10 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 68 - U - - - ML 156 155 3 158 3 1 8 118 198 -5.620 -0.060 -5.620 -1.760 -1.417 -1.924 1.617 D 157 155 3 158 3 0 4 115 195 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 10 125 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 69 - G - - - ML 159 158 3 161 3 1 8 117 197 -5.620 -0.060 -5.620 -1.806 -2.586 1.742 -2.303 D 160 158 3 161 3 0 3 113 193 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 9 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 70 - C - - - ML 162 161 3 164 3 1 7 115 195 -5.620 -0.060 -5.620 -2.016 1.657 -2.220 -1.381 D 163 161 3 164 3 0 3 112 192 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 9 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 71 - U - - - ML 165 164 3 167 3 1 7 114 194 -5.620 -0.060 -5.620 -1.760 -1.417 -1.924 1.617 D 166 164 3 167 3 0 2 111 190 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 8 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 72 - U - - - ML 168 167 3 170 3 1 6 112 192 -5.620 -0.060 -5.620 -1.760 -1.417 -1.924 1.617 D 169 167 3 170 3 0 2 109 189 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 8 119 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 73 - U - - - ML 171 170 3 173 3 1 6 111 190 -4.073 -0.120 -5.620 -1.760 -1.417 -1.924 1.617 D 172 170 3 173 3 0 2 108 187 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 6 111 191 -3.449 -0.139 -11.093 0.000 0.000 0.000 0.000 [ MATL 58 ] 75 - U - - - ML 174 173 3 176 3 1 5 110 189 -5.620 -0.060 -5.620 -1.760 -1.417 -1.924 1.617 D 175 173 3 176 3 0 1 107 186 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 7 117 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 76 - A - - - ML 177 176 3 179 3 1 5 109 188 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 178 176 3 179 3 0 1 105 184 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 6 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 77 - C - - - ML 180 179 3 182 3 1 4 107 186 -5.620 -0.060 -5.620 -1.565 1.461 -1.188 -1.086 D 181 179 3 182 3 0 0 104 183 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 6 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 78 - A - - - ML 183 182 3 185 3 1 4 106 185 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 184 182 3 185 3 0 0 102 181 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 5 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 79 - A - - - ML 186 185 3 188 3 1 3 104 183 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 187 185 3 188 3 0 0 101 179 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 5 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 80 - A - - - ML 189 188 3 191 3 1 3 103 181 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 190 188 3 191 3 0 0 99 178 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 4 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 81 - A - - - ML 192 191 3 194 3 1 3 101 180 -5.620 -0.060 -5.620 1.362 -1.554 -0.593 -1.233 D 193 191 3 194 3 0 0 98 176 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 4 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 82 - G - - - ML 195 194 3 197 3 1 2 100 178 -5.620 -0.060 -5.620 -1.806 -2.586 1.742 -2.303 D 196 194 3 197 3 0 0 97 174 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 4 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 83 - C - - - ML 198 197 3 200 3 1 2 99 176 -5.620 -0.060 -5.620 -2.016 1.657 -2.220 -1.381 D 199 197 3 200 3 0 0 95 172 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 3 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 84 - A - - - ML 201 200 3 203 3 1 2 97 175 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 202 200 3 203 3 0 0 94 171 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 3 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 85 - G - - - ML 204 203 3 206 3 1 1 96 173 -5.620 -0.060 -5.620 -0.916 -2.088 1.556 -1.767 D 205 203 3 206 3 0 0 92 169 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 2 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 86 - A - - - ML 207 206 3 209 3 1 1 94 171 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 208 206 3 209 3 0 0 91 167 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 2 101 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 87 - A - - - ML 210 209 3 212 3 1 1 93 169 -5.620 -0.060 -5.620 1.362 -1.554 -0.593 -1.233 D 211 209 3 212 3 0 0 89 166 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 2 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 88 - U - - - ML 213 212 3 215 3 1 1 91 168 -5.620 -0.060 -5.620 -0.635 -1.067 -1.308 1.307 D 214 212 3 215 3 0 0 88 164 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 2 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 89 - a - - - ML 216 215 3 218 3 1 1 89 166 -5.620 -0.060 -5.620 0.729 -0.823 -0.309 -0.044 D 217 215 3 218 3 0 0 86 162 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 90 - a - - - ML 219 218 3 221 3 1 1 88 164 -3.202 -0.265 -4.073 0.967 -0.979 -0.984 0.046 D 220 218 3 221 3 0 0 85 161 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 2 89 165 -0.978 -1.023 -13.128 0.000 0.000 0.000 0.000 [ MATL 74 ] 93 - A - - - ML 222 221 3 224 3 1 1 87 163 -5.563 -0.062 -5.563 1.306 -1.221 -1.192 -0.598 D 223 221 3 224 3 0 0 84 160 -12.266 -0.752 -1.300 IL 224 224 3 224 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 94 - A - - - ML 225 224 3 227 3 1 1 85 161 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 226 224 3 227 3 0 0 82 158 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 95 - g - - - ML 228 227 3 230 3 1 1 84 159 -4.267 -0.329 -2.716 0.173 -0.810 0.751 -0.692 D 229 227 3 230 3 0 0 81 156 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 2 85 161 -0.942 -1.062 -11.718 0.000 0.000 0.000 0.000 [ MATL 77 ] 98 - c - - - ML 231 230 3 233 3 1 1 83 158 -5.416 -0.069 -5.416 0.069 0.436 -0.731 -0.007 D 232 230 3 233 3 0 0 80 155 -13.212 -1.126 -0.885 IL 233 233 3 233 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 99 - G - - - ML 234 233 3 236 3 1 1 81 156 -5.525 -0.064 -5.525 -0.490 -1.721 1.379 -1.383 D 235 233 3 236 3 0 0 78 153 -12.584 -0.569 -1.618 IL 236 236 3 236 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 100 - A - - - ML 237 236 3 239 3 1 1 79 154 -5.620 -0.060 -5.620 1.239 -0.611 -1.183 -0.877 D 238 236 3 239 3 0 0 76 150 -11.551 -1.585 -0.585 IL 239 239 3 239 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 101 - A - - - ML 240 239 3 242 3 1 1 78 153 -5.620 -0.306 -2.551 1.146 -1.370 -0.136 -1.029 D 241 239 3 242 3 0 0 74 148 -11.551 -1.585 -0.585 IL 242 242 3 242 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 102 - A - - - ML 243 242 3 245 3 1 1 76 151 -5.385 -0.071 -5.385 1.257 -1.286 -0.537 -0.971 D 244 242 3 245 3 0 0 72 145 -13.344 -3.378 -0.146 IL 245 245 3 245 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 103 - u - - - ML 246 245 3 248 3 1 1 75 149 -5.385 -0.071 -5.385 -0.185 -0.434 -0.211 0.600 D 247 245 3 248 3 0 0 71 145 -13.344 -3.378 -0.146 IL 248 248 3 248 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 104 - G - - - ML 249 248 3 251 3 1 1 73 147 -3.378 -0.185 -5.385 -0.424 -1.505 1.297 -1.168 D 250 248 3 251 3 0 0 71 145 -13.344 -0.667 -1.434 IL 251 251 3 251 3 1 1 73 147 -4.036 -0.091 -11.680 0.000 0.000 0.000 0.000 [ MATL 84 ] 106 - A - - - ML 252 251 3 254 3 1 1 72 145 -5.565 -0.062 -5.565 1.186 -0.552 -1.093 -0.799 D 253 251 3 254 3 0 0 69 142 -12.243 -0.768 -1.277 IL 254 254 3 254 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 85 ] 107 - A - - - ML 255 254 3 257 3 1 1 70 143 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 256 254 3 257 3 0 0 66 139 -11.551 -1.585 -0.585 IL 257 257 3 257 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 86 ] 108 - a - - - ML 258 257 3 260 3 1 1 68 141 -5.620 -0.060 -5.620 0.975 -0.491 -0.903 -0.343 D 259 257 3 260 3 0 0 64 136 -11.551 -1.585 -0.585 IL 260 260 3 260 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 87 ] 109 - u - - - ML 261 260 3 263 3 1 1 66 139 -5.620 -0.060 -5.620 -0.745 -0.545 -0.254 0.910 D 262 260 3 263 3 0 0 62 134 -11.551 -1.585 -0.585 IL 263 263 3 263 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 88 ] 110 - G - - - ML 264 263 3 266 3 1 1 64 137 -5.620 -0.060 -5.620 -0.556 -1.886 1.437 -1.549 D 265 263 3 266 3 0 0 60 132 -11.551 -1.585 -0.585 IL 266 266 3 266 3 1 1 73 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 89 ] 111 - A - - - ML 267 266 3 269 3 1 1 62 134 -5.620 -0.060 -5.620 1.352 -0.873 -1.296 -1.020 D 268 266 3 269 3 0 0 58 129 -11.551 -1.585 -0.585 IL 269 269 3 269 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 90 ] 112 - A - - - ML 270 269 3 272 3 1 1 60 132 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 271 269 3 272 3 0 0 55 126 -11.551 -1.585 -0.585 IL 272 272 3 272 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 91 ] 113 - A - - - ML 273 272 3 275 3 1 1 58 129 -5.620 -0.060 -5.620 1.730 -2.307 -2.047 -2.065 D 274 272 3 275 3 0 0 52 123 -11.551 -1.585 -0.585 IL 275 275 3 275 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 92 ] 114 - A - - - ML 276 275 3 278 3 1 1 55 126 -5.620 -0.108 -4.275 1.730 -2.307 -2.047 -2.065 D 277 275 3 278 3 0 0 49 119 -11.551 -1.585 -0.585 IL 278 278 3 278 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 93 ] 115 - U - - - ML 279 278 3 281 3 1 1 53 122 -5.574 -0.062 -5.574 -0.834 -1.079 -1.374 1.367 D 280 278 3 281 3 0 0 43 112 -12.149 -2.183 -0.359 IL 281 281 3 281 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 94 ] 116 - G - - - ML 282 281 3 284 3 1 1 49 118 -5.574 -0.315 -2.513 -0.925 -0.192 1.033 -0.859 D 283 281 3 284 3 0 0 30 100 -12.149 -2.183 -0.359 IL 284 284 3 284 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 95 ] 117 - a - - - ML 285 284 3 287 2 1 1 1 1 * 0.000 0.426 -0.269 -0.249 -0.021 D 286 284 3 287 2 0 0 0 0 * 0.000 IL 287 287 3 287 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 96 ] - - - - - - E 288 287 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME MALAT1 ACC RF01871 DESC Metastasis associated lung adenocarcinoma transcript 1 LENG 95 MAXL 188 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Fri Jul 12 21:50:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01871/CM NSEQ 17 EFFN 2.718506 CKSUM 3486338249 STATS LOCAL MSV -9.0040 0.71832 STATS LOCAL VITERBI -10.2704 0.71832 STATS LOCAL FORWARD -3.1065 0.71832 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.96793 1.72597 1.58065 1.44269 1.38629 1.38629 1.38629 1.38629 0.06060 5.01814 2.95301 0.39730 1.11515 0.00000 * 1 2.01382 2.14925 2.36755 0.42123 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04283 3.86493 3.86493 1.46634 0.26236 1.50079 0.25225 2 0.57864 2.13405 2.12687 1.60062 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04283 3.86493 3.86493 1.46634 0.26236 1.50079 0.25225 3 0.20389 2.90910 2.72917 2.73877 - A - - : 1.38629 1.38629 1.38629 1.38629 0.06787 3.86493 3.10881 1.46634 0.26236 0.59042 0.80765 4 1.88617 1.58980 1.65719 0.79030 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04251 3.87235 3.87235 1.46634 0.26236 1.41827 0.27725 5 1.89489 2.73118 0.35281 2.50334 - G - - : 1.38629 1.38629 1.38629 1.38629 0.09969 2.60277 3.87235 0.07358 2.64595 1.41827 0.27725 6 0.19974 2.92748 2.74750 2.75772 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04251 3.87235 3.87235 1.46634 0.26236 1.41827 0.27725 7 0.19974 2.92748 2.74750 2.75772 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04251 3.87235 3.87235 1.46634 0.26236 1.41827 0.27725 8 2.24291 1.64684 2.36432 0.49893 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04251 3.87235 3.87235 1.46634 0.26236 0.66216 0.72513 9 2.13379 2.11446 1.79308 0.52009 - U - - : 1.38629 1.38629 1.38629 1.38629 0.10765 2.50435 3.89559 0.06292 2.79723 1.09861 0.40547 10 2.07098 2.30807 0.56695 1.57392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 11 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 12 2.60611 2.36836 2.71982 0.26571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 13 2.16866 2.48788 0.42626 1.89953 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 14 0.54831 2.17495 2.17576 1.63506 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 15 1.73257 2.28457 0.58898 1.79300 - G - - : 1.38629 1.38629 1.38629 1.38629 0.10765 3.89559 2.50435 1.46634 0.26236 1.09861 0.40547 16 0.71218 1.85601 1.68078 1.79033 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04429 3.83223 3.83223 1.46634 0.26236 0.40382 1.10191 17 0.63057 1.90578 1.80385 1.86859 - A - - : 1.38629 1.38629 1.38629 1.38629 0.39136 1.45741 2.39661 1.58146 0.23026 1.09861 0.40547 18 0.92831 1.95936 1.95693 1.13153 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04474 3.82227 3.82227 1.46634 0.26236 0.93050 0.50146 19 1.67341 2.05132 2.17608 0.56152 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04324 3.85571 3.85571 1.46634 0.26236 0.52133 0.90073 20 0.95195 1.73201 1.46694 1.57768 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 21 1.96701 0.53653 2.02684 1.94072 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 22 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 23 0.48314 2.42001 1.70049 2.19243 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 24 2.25374 1.59251 2.37670 0.51296 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 25 2.63808 3.17852 0.17888 2.98282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 26 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 27 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 28 2.63808 3.17852 0.17888 2.98282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 29 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 30 1.94865 2.06212 1.01236 1.00243 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 31 1.46704 0.89190 1.70004 1.73250 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 32 0.91393 1.52293 1.61329 1.70511 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 33 0.36925 2.56121 1.99500 2.34836 - A - - : 1.38629 1.38629 1.38629 1.38629 0.07472 2.96296 3.89559 0.11770 2.19788 1.09861 0.40547 34 0.44203 2.46377 1.79711 2.24072 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 35 1.75795 2.10754 2.25670 0.50855 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 36 1.51818 2.18128 0.71812 1.71300 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 37 1.95486 2.16113 2.36403 0.43205 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 38 2.37725 0.51805 2.51149 1.46807 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 39 2.14472 0.36732 2.61987 2.14134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 40 0.48314 2.42001 1.70049 2.19243 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 41 2.22537 1.48756 2.34761 0.56132 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 42 2.78387 0.23759 2.92510 2.34328 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 43 1.53724 2.05512 2.14927 0.61548 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 44 2.78387 0.23759 2.92510 2.34328 - C - - : 1.38629 1.38629 1.38629 1.38629 0.07472 3.89559 2.96296 1.46634 0.26236 1.09861 0.40547 45 0.87680 1.62880 1.58069 1.70437 - a - - : 1.38629 1.38629 1.38629 1.38629 0.07597 3.86375 2.95338 1.46634 0.26236 1.51319 0.24873 46 0.22323 2.82877 2.64854 2.65596 - A - - : 1.38629 1.38629 1.38629 1.38629 0.12069 2.89431 2.84121 0.11680 2.20513 0.40328 1.10301 47 0.20638 2.89830 2.71837 2.72763 - A - - : 1.38629 1.38629 1.38629 1.38629 0.08621 3.86055 2.78800 1.46634 0.26236 1.54620 0.23960 48 0.47685 2.22722 2.19034 1.83533 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04488 3.81922 3.81922 1.46634 0.26236 0.35994 1.19641 49 1.87222 1.77405 2.18820 0.57189 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 50 0.94322 1.83689 1.27771 1.75655 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 51 2.78387 0.23759 2.92510 2.34328 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 52 2.60611 2.36836 2.71982 0.26571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 53 2.63808 3.17852 0.17888 2.98282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 54 2.78387 0.23759 2.92510 2.34328 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 55 2.60611 2.36836 2.71982 0.26571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 56 2.60611 2.36836 2.71982 0.26571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 57 2.60611 2.36836 2.71982 0.26571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.08312 2.82304 3.89559 0.09610 2.39006 1.09861 0.40547 58 2.60611 2.36836 2.71982 0.26571 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 59 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 60 2.47111 0.37395 2.20971 2.13906 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 61 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 62 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 63 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 64 0.44203 2.46377 1.79711 2.24072 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 65 2.63808 3.17852 0.17888 2.98282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 66 2.78387 0.23759 2.92510 2.34328 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 67 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 68 2.02118 2.83347 0.30757 2.61098 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 69 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 70 0.44203 2.46377 1.79711 2.24072 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 71 1.82631 2.12560 2.29318 0.48016 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 72 0.88079 1.95674 1.60047 1.41707 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 73 0.71620 2.06456 2.06830 1.35433 - a - - : 1.38629 1.38629 1.38629 1.38629 0.18401 2.21962 2.82304 0.70892 0.67762 1.09861 0.40547 74 0.48090 2.23259 2.21272 1.80108 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04324 3.85571 3.85571 1.46634 0.26236 0.52133 0.90073 75 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 76 1.26665 1.94796 0.86543 1.86568 - g - - : 1.38629 1.38629 1.38629 1.38629 0.22837 2.95781 1.88231 0.73560 0.65243 1.09861 0.40547 77 1.33850 1.08404 1.89274 1.39080 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04797 3.75413 3.75413 1.46634 0.26236 0.78010 0.61315 78 1.72594 2.57917 0.43030 2.34503 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04441 3.82964 3.82964 1.46634 0.26236 0.39421 1.12151 79 0.52748 1.80966 2.20627 1.99443 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 80 0.59204 2.33596 1.48030 2.09950 - A - - : 1.38629 1.38629 1.38629 1.38629 0.21193 3.89559 1.76814 1.46634 0.26236 1.09861 0.40547 81 0.51471 2.27776 1.75879 2.05918 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04904 3.73270 3.73270 1.46634 0.26236 2.34117 0.10116 82 1.51440 1.68720 1.53254 0.97012 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04904 3.73270 3.73270 1.46634 0.26236 2.34117 0.10116 83 1.68024 2.42972 0.48717 2.19601 - G - - : 1.38629 1.38629 1.38629 1.38629 0.12796 2.34146 3.73270 0.06292 2.79723 0.46218 0.99400 84 0.56442 1.76907 2.14408 1.94044 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04317 3.85732 3.85732 1.46634 0.26236 0.53216 0.88512 85 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 86 0.71080 1.72646 2.01232 1.62376 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 87 1.90250 1.76406 1.56205 0.75555 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 88 1.77189 2.69349 0.39021 2.46004 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 89 0.44894 1.99111 2.28436 2.09306 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 90 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 91 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04151 3.89559 3.89559 1.46634 0.26236 1.09861 0.40547 92 0.18724 2.98553 2.80514 2.81764 - A - - : 1.38629 1.38629 1.38629 1.38629 0.07472 3.89559 2.96296 1.46634 0.26236 1.09861 0.40547 93 1.96461 2.13425 2.33898 0.43846 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04288 3.86375 3.86375 1.46634 0.26236 1.51319 0.24873 94 2.02737 1.51951 0.67002 1.98193 - G - - : 1.38629 1.38629 1.38629 1.38629 0.21831 3.86375 1.74222 1.46634 0.26236 1.51319 0.24873 95 1.09095 1.57299 1.55887 1.40119 - a - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //