INFERNAL1/a [1.1.5 | Sep 2023] NAME PtaRNA1 ACC RF01811 DESC Plasmid transferred anti-sense RNA STATES 225 NODES 57 CLEN 72 W 89 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 06:55:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01811/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.105469 CKSUM 3585270671 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.30 NC 45.80 EFP7GF -8.9029 0.71901 ECMLC 0.57190 -9.06907 0.90340 1600000 359821 0.003335 ECMGC 0.43554 -16.48748 -4.04912 1600000 90117 0.004439 ECMLI 0.57539 -6.75315 2.72088 1600000 279673 0.004291 ECMGI 0.47389 -10.90687 -0.08951 1600000 67350 0.005939 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 89 109 -7.018 -7.225 -0.051 -5.639 IL 1 1 2 1 4 2 25 93 113 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 92 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 2 24 89 109 -8.030 -0.020 -6.684 -1.047 -0.645 -1.786 1.371 D 4 2 3 5 3 0 20 88 108 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 24 91 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 2 23 88 108 -8.030 -0.020 -6.684 -1.608 -1.583 -2.348 1.652 D 7 5 3 8 3 0 20 87 107 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 23 90 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 22 87 107 -8.416 -0.018 -6.734 -1.720 -2.962 1.754 -2.349 D 10 8 3 11 3 0 19 86 106 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 22 88 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 77 - U - - MR 12 11 3 14 3 1 21 86 106 -8.416 -0.018 -6.734 -1.608 -1.583 -2.348 1.652 D 13 11 3 14 3 0 18 84 104 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 21 87 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 76 - u - - MR 15 14 3 17 3 1 20 85 105 -8.416 -0.018 -6.734 -0.781 0.170 -1.548 0.964 D 16 14 3 17 3 0 18 83 103 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 20 86 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 75 - C - - MR 18 17 3 20 3 1 19 84 104 -8.416 -0.018 -6.734 -1.901 1.665 -2.730 -1.283 D 19 17 3 20 3 0 17 83 102 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 19 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 74 - G - - MR 21 20 3 23 2 1 18 83 103 -8.435 -0.004 -1.720 -2.962 1.754 -2.349 D 22 20 3 23 2 0 17 82 102 -4.432 -0.068 IR 23 23 3 23 2 1 18 84 104 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 8 ] - - - - - - B 24 23 3 25 126 0 17 82 102 [ BEGL 9 ] - - - - - - S 25 24 1 26 4 0 1 49 68 -0.044 -6.869 -6.277 -6.917 [ MATP 10 ] 4 39 c g - - MP 26 25 1 30 6 2 4 49 68 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.606 -3.556 -3.520 0.177 -2.511 -4.128 2.814 -3.204 -3.525 0.398 -3.937 -1.549 1.871 -3.765 0.593 -2.405 ML 27 25 1 30 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 1 30 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 1 30 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 38 C G - - MP 32 31 6 36 6 2 3 47 66 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 33 31 6 36 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 37 A U - - MP 38 37 6 42 4 2 2 45 64 -7.018 -7.225 -0.051 -5.639 -3.912 -2.913 -3.921 3.405 -4.320 -5.394 -0.012 -3.956 -3.808 0.948 -4.362 -0.370 -0.429 -4.562 -1.953 -2.748 ML 39 37 6 42 4 1 1 45 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 4 1 1 45 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 41 37 6 42 4 0 0 44 63 -4.568 -4.250 -2.265 -0.520 IL 42 42 5 42 4 1 1 47 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 43 43 6 43 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 7 - U - - - ML 44 43 6 46 3 1 1 42 62 -8.030 -0.020 -6.684 -1.608 -1.583 -2.348 1.652 D 45 43 6 46 3 0 0 41 60 -6.174 -1.687 -0.566 IL 46 46 3 46 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 8 - g - - - ML 47 46 3 49 3 1 1 41 60 -8.416 -0.018 -6.734 0.518 -1.506 0.754 -0.916 D 48 46 3 49 3 0 0 40 59 -5.620 -0.734 -1.403 IL 49 49 3 49 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 36 - g - - MR 50 49 3 52 3 1 1 40 59 -8.416 -0.018 -6.734 -0.292 -1.165 0.835 -0.068 D 51 49 3 52 3 0 0 39 58 -6.390 -1.568 -0.620 IR 52 52 3 52 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 35 - u - - MR 53 52 3 55 5 1 1 39 58 -2.437 -0.328 -6.966 -7.178 -8.070 0.433 -0.499 -1.030 0.539 D 54 52 3 55 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 55 55 3 55 5 1 1 39 59 -1.920 -0.559 -6.774 -4.942 -6.048 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 31 c g - - MP 56 55 3 60 4 2 2 38 57 -7.018 -7.225 -0.051 -5.639 -2.207 -2.232 0.053 1.462 -2.167 -3.177 1.884 -2.575 -2.414 1.282 -2.955 -0.554 1.449 -2.489 -0.159 -1.502 ML 57 55 3 60 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 58 55 3 60 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 59 55 3 60 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 60 60 5 60 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 61 61 6 61 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - U - - - ML 62 61 6 64 3 1 1 35 54 -8.030 -0.020 -6.684 -0.752 -1.011 -0.987 1.266 D 63 61 6 64 3 0 0 34 53 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - U - - - ML 65 64 3 67 3 1 1 34 53 -8.416 -0.018 -6.734 -1.608 -1.583 -2.348 1.652 D 66 64 3 67 3 0 0 33 52 -5.620 -0.734 -1.403 IL 67 67 3 67 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 30 - u - - MR 68 67 3 70 3 1 1 33 52 -8.416 -0.018 -6.734 -0.487 -0.920 -0.263 0.945 D 69 67 3 70 3 0 0 31 50 -6.390 -1.568 -0.620 IR 70 70 3 70 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 29 - u - - MR 71 70 3 73 5 1 1 32 51 -7.151 -0.038 -6.966 -7.178 -8.070 -0.414 -0.931 0.104 0.723 D 72 70 3 73 5 0 0 31 50 -5.352 -0.707 -2.978 -4.409 -2.404 IR 73 73 3 73 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 12 28 C G - - MP 74 73 3 78 6 2 2 31 50 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 75 73 3 78 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 76 73 3 78 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 77 73 3 78 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 78 78 5 78 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 79 79 6 79 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 13 27 A U - - MP 80 79 6 84 6 2 2 29 48 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.912 -2.913 -3.921 3.405 -4.320 -5.394 -0.012 -3.956 -3.808 0.948 -4.362 -0.370 -0.429 -4.562 -1.953 -2.748 ML 81 79 6 84 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 82 79 6 84 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 83 79 6 84 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 84 84 5 84 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 85 85 6 85 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 14 26 C G - - MP 86 85 6 90 6 2 2 27 46 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 87 85 6 90 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 6 90 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 6 90 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 15 25 C G - - MP 92 91 6 96 6 2 2 25 44 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 93 91 6 96 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 16 24 U A - - MP 98 97 6 102 4 2 2 23 42 -7.018 -7.225 -0.051 -5.639 -4.346 -4.175 -4.167 -0.459 -3.076 -4.717 1.255 -3.783 -4.171 -0.227 -4.536 -2.069 3.398 -4.492 -0.749 -2.979 ML 99 97 6 102 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 101 97 6 102 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 102 102 5 102 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 103 103 6 103 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 17 - C - - - ML 104 103 6 106 3 1 1 20 39 -8.030 -0.020 -6.684 -1.901 1.665 -2.730 -1.283 D 105 103 6 106 3 0 0 19 38 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 18 - U - - - ML 107 106 3 109 3 1 1 19 37 -8.030 -0.020 -6.684 -1.608 -1.583 -2.348 1.652 D 108 106 3 109 3 0 0 18 37 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 19 - C - - - ML 110 109 3 112 3 1 1 17 36 -8.030 -0.020 -6.684 -0.909 1.232 -1.164 -0.575 D 111 109 3 112 3 0 0 17 36 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 20 - u - - - ML 113 112 3 115 3 1 1 16 35 -8.030 -0.020 -6.684 -0.130 0.273 -1.189 0.526 D 114 112 3 115 3 0 0 16 34 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 21 - A - - - ML 116 115 3 118 3 1 1 15 33 -8.030 -0.020 -6.684 1.209 -1.530 -0.256 -0.989 D 117 115 3 118 3 0 0 15 33 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 22 - g - - - ML 119 118 3 121 3 1 1 13 31 -8.030 -0.020 -6.684 -0.250 -1.069 0.680 0.110 D 120 118 3 121 3 0 0 13 32 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 23 - c - - - ML 122 121 3 124 2 1 1 1 1 * 0.000 -0.809 0.777 -1.612 0.473 D 123 121 3 124 2 0 0 0 0 * 0.000 IL 124 124 3 124 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 34 ] - - - - - - E 125 124 3 -1 0 0 0 0 0 [ BEGR 35 ] - - - - - - S 126 24 1 127 3 0 0 46 65 -8.030 -0.020 -6.684 IL 127 127 2 127 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - A - - - ML 128 127 2 130 3 1 1 46 65 -8.030 -0.020 -6.684 1.746 -2.504 -2.123 -2.060 D 129 127 2 130 3 0 0 45 64 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - A - - - ML 131 130 3 133 5 1 1 45 64 -7.151 -0.038 -6.966 -7.178 -8.070 1.485 -1.319 -1.511 -1.155 D 132 130 3 133 5 0 0 44 63 -4.959 -0.803 -4.221 -2.596 -2.508 IL 133 133 3 133 5 1 1 46 64 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 42 73 G C - - MP 134 133 3 138 6 2 2 44 63 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.286 -2.868 -4.324 0.966 -4.899 -4.616 -0.279 -4.652 -4.103 3.465 -4.475 -0.522 -0.600 -4.167 -2.291 -3.212 ML 135 133 3 138 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 3 138 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 3 138 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 44 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 43 72 u g - - MP 140 139 6 144 6 2 2 42 61 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.052 -4.044 -3.784 -0.383 -2.561 -4.216 1.726 -3.338 -3.832 -0.182 -4.136 -2.122 1.273 -4.132 2.916 -2.706 ML 141 139 6 144 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 6 144 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 42 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 44 71 g c - - MP 146 145 6 150 6 2 2 40 59 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.681 -2.503 -3.761 1.017 -4.444 -4.674 0.010 -4.007 -3.629 2.742 -4.091 2.119 -0.268 -3.969 -1.941 -2.599 ML 147 145 6 150 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 39 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 6 150 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 40 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 45 70 c g - - MP 152 151 6 156 6 2 2 38 57 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.676 -3.627 -3.569 0.114 -2.522 -4.153 2.918 -3.229 -3.576 0.337 -3.974 -1.619 1.705 -3.824 0.615 -2.450 ML 153 151 6 156 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 6 1 1 37 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 38 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 46 69 C G - - MP 158 157 6 162 6 2 2 36 55 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.779 -3.545 -3.684 0.207 -2.722 -4.311 3.109 -3.381 -3.681 1.072 -4.085 -1.399 1.041 -3.937 -0.377 -2.542 ML 159 157 6 162 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 35 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 36 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 47 68 G C - - MP 164 163 6 168 6 2 2 34 53 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.874 -3.157 -4.986 0.112 -5.418 -4.745 -0.750 -5.238 -4.413 3.668 -4.741 -0.861 -1.132 -4.554 -2.795 -3.861 ML 165 163 6 168 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 6 168 6 1 1 33 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 34 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 48 67 G C - - MP 170 169 6 174 6 2 2 32 51 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.874 -3.157 -4.986 0.112 -5.418 -4.745 -0.750 -5.238 -4.413 3.668 -4.741 -0.861 -1.132 -4.554 -2.795 -3.861 ML 171 169 6 174 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 6 1 1 31 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 6 174 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 32 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 49 66 c g - - MP 176 175 6 180 6 2 2 30 49 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.513 -3.190 -3.478 0.520 -2.705 -4.169 2.764 -3.287 -3.482 1.707 -3.921 -1.029 1.139 -3.673 -0.349 -2.350 ML 177 175 6 180 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 50 65 C G - - MP 182 181 6 186 6 2 2 28 47 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.202 -4.168 -3.951 -0.395 -2.709 -4.401 3.367 -3.493 -3.985 -0.171 -4.294 -2.167 0.869 -4.279 0.277 -2.830 ML 183 181 6 186 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 184 181 6 186 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 185 181 6 186 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 186 186 5 186 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 187 187 6 187 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 51 64 g c - - MP 188 187 6 192 6 2 2 26 45 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.600 -2.700 -3.573 0.867 -3.544 -4.189 0.904 -3.775 -3.649 2.974 -4.047 -0.427 1.205 -3.582 -1.103 -2.507 ML 189 187 6 192 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 190 187 6 192 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 191 187 6 192 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 192 192 5 192 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 193 193 6 193 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 52 63 G C - - MP 194 193 6 198 6 2 2 24 43 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.874 -3.157 -4.986 0.112 -5.418 -4.745 -0.750 -5.238 -4.413 3.668 -4.741 -0.861 -1.132 -4.554 -2.795 -3.861 ML 195 193 6 198 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 6 198 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 6 198 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 53 62 c g - - MP 200 199 6 204 4 2 2 22 41 -7.018 -7.225 -0.051 -5.639 -3.044 -2.906 -3.100 0.709 -2.488 -3.864 2.264 -3.033 -3.115 1.586 -3.608 -0.906 1.562 -3.255 0.839 -2.044 ML 201 199 6 204 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 203 199 6 204 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 204 204 5 204 4 1 1 25 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 205 205 6 205 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - u - - - ML 206 205 6 208 3 1 1 19 38 -8.030 -0.020 -6.684 -0.440 0.104 -0.821 0.698 D 207 205 6 208 3 0 0 19 37 -6.174 -1.687 -0.566 IL 208 208 3 208 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - c - - - ML 209 208 3 211 3 1 1 18 36 -8.030 -0.269 -2.589 -0.335 0.280 -0.343 0.268 D 210 208 3 211 3 0 0 17 36 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - g - - - ML 212 211 3 214 3 1 1 17 35 -7.784 -0.023 -6.438 0.114 -0.142 0.178 -0.184 D 213 211 3 214 3 0 0 16 34 -7.504 -3.017 -0.199 IL 214 214 3 214 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - c - - - ML 215 214 3 217 3 1 1 15 33 -2.997 -0.521 -2.492 -0.606 0.676 -1.380 0.445 D 216 214 3 217 3 0 0 16 33 -0.718 -3.017 -1.896 IL 217 217 3 217 3 1 1 16 34 -1.778 -0.564 -4.972 0.000 0.000 0.000 0.000 [ MATL 54 ] 60 - a - - - ML 218 217 3 220 3 1 1 13 32 -7.812 -0.023 -6.466 0.596 -0.902 0.001 -0.070 D 219 217 3 220 3 0 0 12 31 -7.411 -2.924 -0.214 IL 220 220 3 220 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 61 - c - - - ML 221 220 3 223 2 1 1 1 1 * 0.000 -0.249 0.316 -0.175 0.040 D 222 220 3 223 2 0 0 0 0 * 0.000 IL 223 223 3 223 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 56 ] - - - - - - E 224 223 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PtaRNA1 ACC RF01811 DESC Plasmid transferred anti-sense RNA LENG 72 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 06:55:40 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01811/CM NSEQ 16 EFFN 3.394531 CKSUM 3585270671 STATS LOCAL MSV -8.6087 0.71901 STATS LOCAL VITERBI -9.2072 0.71901 STATS LOCAL FORWARD -3.2422 0.71901 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.75784 1.29531 1.23641 1.33430 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 0.00000 * 1 2.45671 1.95319 2.97816 0.32632 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 2 3.03818 2.93147 3.56946 0.13859 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 3 3.14565 4.07690 0.09006 3.64503 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 4 2.66225 0.70210 2.42687 1.06030 4 c - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 5 3.67951 0.14921 3.50190 2.48604 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 6 0.19796 3.34705 2.24692 3.25234 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 7 3.03818 2.93147 3.56946 0.13859 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 8 0.99644 2.72113 0.76004 2.32933 8 g - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 9 1.21654 1.31444 1.69945 1.37699 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 10 2.20066 2.34533 2.20374 0.38117 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 11 3.03818 2.93147 3.56946 0.13859 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 12 3.67277 0.14966 3.49831 2.48477 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 13 0.19801 3.34667 2.24683 3.25184 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 14 3.67074 0.14979 3.49723 2.48439 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 15 3.66865 0.14993 3.49611 2.48400 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 16 3.51707 2.32802 3.32374 0.17816 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 17 3.38412 0.11908 3.94771 2.82923 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 18 3.03818 2.93147 3.56946 0.13859 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 19 2.43553 0.35551 2.38938 2.12072 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 20 1.53900 1.11241 2.37500 1.01163 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 21 0.45583 2.75000 1.55269 2.40272 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 22 1.68008 2.30139 0.79693 1.33632 22 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 23 2.21853 0.72558 2.81015 1.05845 23 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 24 0.20208 3.51643 2.16391 3.26001 24 A - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 25 2.76615 3.66355 0.12865 3.43668 25 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 26 2.76798 3.66641 0.12832 3.43991 26 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 27 3.48125 2.59459 3.15761 0.16014 27 U - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 28 2.77419 3.67617 0.12719 3.45092 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 29 1.84087 2.20502 1.25273 0.80890 29 u - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 30 1.91893 2.21519 1.56003 0.62741 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 31 1.57272 1.85907 0.94801 1.38955 31 g - - > 1.38629 1.38629 1.38629 1.38629 0.32275 1.34972 4.10226 0.51107 0.91592 1.09861 0.40547 32 1.05077 1.77937 2.21957 0.98636 35 u - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 33 1.72575 2.38977 0.68251 1.49182 36 G - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 34 3.46210 2.59140 3.14918 0.16154 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 35 2.76020 3.65426 0.12973 3.42621 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 36 1.37528 2.59081 0.53942 2.41702 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 37 0.09603 3.68733 3.37009 3.43762 40 A - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 38 0.25698 2.46742 2.76025 2.54415 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 39 2.07235 3.23218 0.23546 3.11375 42 G - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 40 3.30615 1.76006 3.13260 0.29075 43 U - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 41 2.11561 3.07425 0.25103 2.89642 44 G - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 42 2.71863 0.62221 2.48776 1.15779 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 43 2.68197 0.46954 1.92218 1.83262 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 44 2.87824 3.68158 0.11452 3.61988 47 G - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 45 2.87743 3.68046 0.11464 3.61836 48 G - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 46 2.44196 0.68555 1.44759 1.74836 49 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 47 3.18274 0.30760 2.98250 1.75647 50 C - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 48 2.14532 2.31023 0.50672 1.70780 51 G - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 49 2.87547 3.67773 0.11496 3.61466 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 50 2.19321 1.09948 1.48645 1.11102 53 c - - < 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 51 1.83775 1.25438 2.01330 0.86269 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 52 1.74992 1.10480 1.60483 1.22414 55 c - - _ 1.38629 1.38629 1.38629 1.38629 0.24942 4.10226 1.58861 1.46634 0.26236 1.09861 0.40547 53 1.35229 1.44940 1.17417 1.62168 56 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04156 3.89440 3.89440 1.46634 0.26236 0.15010 1.97060 54 2.01885 0.79319 2.58509 1.08057 57 c - - _ 1.38629 1.38629 1.38629 1.38629 0.39052 1.97573 1.68939 0.59496 0.80204 1.09861 0.40547 55 0.94043 2.11659 1.34650 1.47425 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04056 3.91822 3.91822 1.46634 0.26236 2.57763 0.07899 56 1.67984 1.07277 1.46470 1.42551 61 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04056 3.91822 3.91822 1.46634 0.26236 0.16477 1.88448 57 1.58062 1.59426 0.79514 1.96917 62 g - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 58 3.78663 0.13800 3.52241 2.56779 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 59 1.83897 0.56254 2.13609 1.87641 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 60 2.28983 3.14116 0.21975 2.94199 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 61 1.99547 1.53609 0.62097 2.19459 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 62 3.79306 0.13763 3.52553 2.56899 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 63 3.79558 0.13748 3.52674 2.56946 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 64 2.08939 2.03091 0.41964 2.43343 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 65 1.52062 2.65642 0.46576 2.48211 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 66 3.11740 0.84816 2.87582 0.75257 71 u - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 67 1.93772 3.29064 0.25950 3.05122 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 68 3.33435 0.27258 3.05297 1.85964 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 69 3.14565 4.07690 0.09006 3.64503 74 G - - : 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 70 3.38412 0.11908 3.94771 2.82923 75 C - - : 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 71 2.18833 1.21212 2.74110 0.64278 76 U - - : 1.38629 1.38629 1.38629 1.38629 0.03363 4.10226 4.10226 1.46634 0.26236 1.09861 0.40547 72 3.03818 2.93147 3.56946 0.13859 77 U - - : 1.38629 1.38629 1.38629 1.38629 0.01696 4.08558 * 1.46634 0.26236 0.00000 * //