INFERNAL1/a [1.1.5 | Sep 2023] NAME PhotoRC-I ACC RF01716 DESC PhotoRC-I RNA STATES 141 NODES 38 CLEN 44 W 58 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 17 00:10:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01716/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 65 EFFN 5.518494 CKSUM 2729645140 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 51.60 NC 37.70 EFP7GF -15.0329 0.71990 ECMLC 0.65638 -9.29473 0.91671 1600000 977442 0.001228 ECMGC 0.40992 -20.04280 -4.88792 1600000 199543 0.002005 ECMLI 0.69621 -7.99240 1.49488 1600000 886683 0.001353 ECMGI 0.42479 -16.96824 -2.94207 1600000 154752 0.002585 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 58 77 -7.962 -8.169 -0.026 -6.583 IL 1 1 2 1 4 1 10 63 82 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 2 1 8 58 77 -9.452 -0.002 0.899 -0.722 -1.473 0.225 D 4 2 3 5 2 0 7 57 76 -8.445 -0.004 IL 5 5 3 5 2 1 8 59 78 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 2 ] - - - - - - B 6 5 3 7 75 0 7 57 76 [ BEGL 3 ] - - - - - - S 7 6 1 8 4 0 0 35 54 -0.029 -7.433 -6.840 -7.480 [ MATP 4 ] 2 23 G C - - MP 8 7 1 12 6 2 2 35 54 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -6.520 -3.982 -7.067 -1.091 -7.642 -5.353 -2.571 -7.246 -5.334 3.878 -5.583 -1.793 -2.932 -5.578 -4.752 -5.921 ML 9 7 1 12 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 10 7 1 12 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 11 7 1 12 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 12 12 5 12 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 13 13 6 13 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 22 G C - - MP 14 13 6 18 4 2 2 33 52 -7.962 -8.169 -0.026 -6.583 -5.976 -3.792 -6.251 -0.702 -7.236 -5.307 -2.186 -6.616 -5.172 3.799 -5.448 -0.389 -2.466 -5.326 -4.305 -5.118 ML 15 13 6 18 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 16 13 6 18 4 1 1 34 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 17 13 6 18 4 0 0 33 52 -4.568 -4.250 -2.265 -0.520 IL 18 18 5 18 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 19 19 6 19 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - C - - - ML 20 19 6 22 3 1 1 31 50 -9.269 -0.010 -7.587 -3.874 1.911 -4.581 -2.959 D 21 19 6 22 3 0 0 30 48 -5.620 -0.734 -1.403 IL 22 22 3 22 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 21 - U - - MR 23 22 3 25 5 1 1 30 49 -7.962 -0.021 -7.777 -7.990 -8.881 -3.262 -2.982 -4.046 1.891 D 24 22 3 25 5 0 0 29 47 -5.352 -0.707 -2.978 -4.409 -2.404 IR 25 25 3 25 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 20 A U - - MP 26 25 3 30 6 2 2 29 48 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -5.606 -4.343 -5.260 3.859 -6.766 -8.078 -2.374 -5.192 -5.368 -0.910 -5.987 -1.635 -2.741 -6.845 -4.289 -4.181 ML 27 25 3 30 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 3 30 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 3 30 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 19 G C - - MP 32 31 6 36 6 2 2 27 46 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -6.520 -3.982 -7.067 -1.091 -7.642 -5.353 -2.571 -7.246 -5.334 3.878 -5.583 -1.793 -2.932 -5.578 -4.752 -5.921 ML 33 31 6 36 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 18 G C - - MP 38 37 6 42 6 2 2 25 44 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -6.010 -3.804 -6.298 -0.726 -7.274 -5.310 -2.217 -6.657 -5.183 3.806 -5.458 -0.465 -2.498 -5.342 -4.340 -5.164 ML 39 37 6 42 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 41 37 6 42 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 42 42 5 42 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 43 43 6 43 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 17 G C - - MP 44 43 6 48 6 2 2 23 42 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -5.855 -3.755 -6.084 0.106 -7.037 -5.309 -2.042 -6.441 -5.128 3.787 -5.415 -1.483 -2.334 -5.282 -4.144 -4.946 ML 45 43 6 48 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 46 43 6 48 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 47 43 6 48 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 48 48 5 48 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 49 49 6 49 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 16 C G - - MP 50 49 6 54 4 2 2 21 40 -7.962 -8.169 -0.026 -6.583 -5.041 -4.850 -4.753 0.546 -3.446 -5.233 3.554 -4.211 -4.738 -0.832 -5.056 -2.629 0.195 -5.146 -1.088 -3.550 ML 51 49 6 54 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 52 49 6 54 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 53 49 6 54 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 54 54 5 54 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 55 55 6 55 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 10 - u - - - ML 56 55 6 58 3 1 1 18 36 -8.925 -0.011 -7.579 0.411 -1.139 -1.207 0.835 D 57 55 6 58 3 0 0 18 36 -6.174 -1.687 -0.566 IL 58 58 3 58 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 11 - U - - - ML 59 58 3 61 3 1 1 17 35 -8.925 -0.011 -7.579 -0.916 -0.142 -2.063 1.217 D 60 58 3 61 3 0 0 17 35 -6.174 -1.687 -0.566 IL 61 61 3 61 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 12 - C - - - ML 62 61 3 64 3 1 1 15 34 -8.925 -0.011 -7.579 -1.124 1.152 -2.324 0.162 D 63 61 3 64 3 0 0 16 34 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 13 - C - - - ML 65 64 3 67 3 1 1 14 33 -8.925 -0.076 -4.345 -3.027 1.790 -3.852 -1.516 D 66 64 3 67 3 0 0 14 33 -6.174 -1.687 -0.566 IL 67 67 3 67 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - C - - - ML 68 67 3 70 3 1 1 12 31 -8.860 -0.344 -2.251 -1.658 1.073 -2.567 0.497 D 69 67 3 70 3 0 0 13 31 -7.015 -2.528 -0.288 IL 70 70 3 70 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - U - - - ML 71 70 3 73 2 1 1 1 1 * 0.000 -1.230 -1.451 -1.104 1.455 D 72 70 3 73 2 0 0 0 0 * 0.000 IL 73 73 3 73 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 19 ] - - - - - - E 74 73 3 -1 0 0 0 0 0 [ BEGR 20 ] - - - - - - S 75 6 1 76 3 0 0 34 53 -8.925 -0.011 -7.579 IL 76 76 2 76 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - u - - - ML 77 76 2 79 3 1 1 34 53 -8.925 -0.011 -7.579 -0.377 -1.335 0.310 0.672 D 78 76 2 79 3 0 0 33 52 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 25 - U - - - ML 80 79 3 82 3 1 1 33 52 -8.925 -0.543 -1.683 -3.262 -2.982 -4.046 1.891 D 81 79 3 82 3 0 0 32 51 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - A - - - ML 83 82 3 85 3 1 1 32 51 -8.398 -0.015 -7.052 1.854 -3.245 -2.794 -2.877 D 84 82 3 85 3 0 0 31 50 -8.877 -0.161 -3.269 IL 85 85 3 85 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - A - - - ML 86 85 3 88 3 1 1 31 49 -8.925 -0.011 -7.579 1.927 -4.219 -3.699 -3.928 D 87 85 3 88 3 0 0 30 49 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - A - - - ML 89 88 3 91 3 1 1 30 48 -8.925 -0.011 -7.579 1.927 -4.219 -3.699 -3.928 D 90 88 3 91 3 0 0 29 48 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - C - - - ML 92 91 3 94 3 1 1 29 47 -8.925 -0.011 -7.579 -3.245 1.831 -4.031 -1.861 D 93 91 3 94 3 0 0 28 47 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - C - - - ML 95 94 3 97 5 1 1 28 46 -5.495 -0.356 -7.777 -2.396 -8.881 -3.204 1.824 -3.997 -1.794 D 96 94 3 97 5 0 0 27 44 -4.959 -0.803 -4.221 -2.596 -2.508 IL 97 97 3 97 5 1 1 28 46 -2.537 -0.447 -4.216 -6.048 -5.321 0.000 0.000 0.000 0.000 [ MATP 28 ] 32 46 G C - - MP 98 97 3 102 6 2 2 27 45 -9.405 -9.344 -0.017 -8.121 -8.400 -8.795 -5.780 -3.617 -6.055 -0.528 -6.906 -5.123 -1.922 -6.385 -4.980 3.807 -5.260 -1.033 -2.223 -5.144 -4.036 -4.920 ML 99 97 3 102 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 3 102 6 1 1 26 44 -8.498 -7.227 -0.391 -7.205 -2.339 -5.419 -0.253 -0.513 -1.173 1.012 D 101 97 3 102 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 1 27 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 33 45 u a - - MP 104 103 6 108 6 2 2 25 43 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -3.299 -3.155 -3.387 0.479 -2.846 -4.207 1.473 -3.354 -3.390 1.678 -3.911 -0.752 2.263 -3.531 1.130 -2.323 ML 105 103 6 108 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 6 108 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 108 108 5 108 6 1 1 25 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 34 44 C G - - MP 110 109 6 114 6 2 2 23 41 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -4.864 -4.815 -4.609 -0.873 -3.286 -5.080 3.167 -4.071 -4.603 -0.699 -4.936 -2.690 2.142 -4.934 -0.348 -3.404 ML 111 109 6 114 6 1 1 22 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 6 114 6 0 0 19 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 35 43 C G - - MP 116 115 6 120 6 2 2 21 39 -9.581 -9.521 -0.015 -8.297 -8.577 -8.972 -4.975 -4.941 -4.680 -1.009 -3.319 -5.114 3.050 -4.119 -4.684 -0.843 -4.994 -2.836 2.466 -5.026 -0.957 -3.484 ML 117 115 6 120 6 1 1 20 38 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 6 1 1 20 38 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 6 120 6 0 0 18 36 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 20 38 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 36 42 C G - - MP 122 121 6 126 4 2 2 19 37 -7.962 -4.896 -0.071 -6.583 -6.651 -6.736 -5.944 -2.921 -4.358 -6.080 3.892 -5.410 -6.163 -2.858 -6.091 -4.823 -1.167 -6.581 -2.220 -4.966 ML 123 121 6 126 4 1 1 20 37 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 4 1 1 19 37 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 125 121 6 126 4 0 0 18 36 -4.568 -4.250 -2.265 -0.520 IL 126 126 5 126 4 1 1 21 38 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 127 127 6 127 3 1 1 19 37 -1.619 -0.679 -4.320 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - U - - - ML 128 127 6 130 3 1 1 16 34 -8.925 -0.011 -7.579 -1.838 -0.080 -2.636 1.386 D 129 127 6 130 3 0 0 16 34 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - U - - - ML 131 130 3 133 3 1 1 14 33 -8.925 -0.011 -7.579 -3.262 -2.982 -4.046 1.891 D 132 130 3 133 3 0 0 15 33 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - C - - - ML 134 133 3 136 3 1 1 12 31 -8.925 -0.011 -7.579 -3.242 1.830 -4.028 -1.855 D 135 133 3 136 3 0 0 13 32 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - G - - - ML 137 136 3 139 2 1 1 1 1 * 0.000 -3.364 -4.787 1.929 -4.106 D 138 136 3 139 2 0 0 0 0 * 0.000 IL 139 139 3 139 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 37 ] - - - - - - E 140 139 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PhotoRC-I ACC RF01716 DESC PhotoRC-I RNA LENG 44 MAXL 109 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 17 00:10:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01716/CM NSEQ 65 EFFN 8.390808 CKSUM 2729645140 STATS LOCAL MSV -6.7045 0.71990 STATS LOCAL VITERBI -7.7010 0.71990 STATS LOCAL FORWARD -4.0766 0.71990 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.84393 1.03485 1.36473 1.46502 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 0.00000 * 1 0.70387 1.95328 2.61591 1.23641 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 2 3.68664 4.73464 0.04365 4.72567 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 3 3.47405 4.53285 0.05487 4.45244 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 4 4.56949 0.03764 4.97699 3.92811 4 C - - - 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 5 0.05283 4.77527 3.41340 4.59598 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 6 3.67848 4.72039 0.04418 4.70579 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 7 3.48415 4.54281 0.05429 4.46337 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 8 2.72098 4.42727 0.09525 4.33503 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 9 2.35513 0.21922 3.51729 2.62699 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 10 1.07467 2.34521 2.34541 0.76152 10 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 11 2.19165 1.47630 3.13838 0.48380 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 12 2.35706 0.51663 3.33859 1.29723 12 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 13 3.95501 0.10836 4.47705 2.62871 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06679 4.80219 2.87537 1.46634 0.26236 1.09861 0.40547 14 2.92047 0.57378 3.59327 1.03510 14 C - - _ 1.38629 1.38629 1.38629 1.38629 0.27765 4.75281 1.45325 1.46634 0.26236 2.18241 0.11965 15 2.60289 2.70612 2.22619 0.28607 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02252 4.49768 4.49768 1.46634 0.26236 0.05890 2.86130 16 2.91078 3.71785 0.19961 2.28050 16 G - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 17 4.48018 0.10909 4.28812 2.54736 17 C - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 18 4.59666 0.09832 4.41689 2.63834 18 C - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 19 4.81398 0.05446 4.62373 3.35032 19 C - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 20 4.85809 3.84599 4.60614 0.03991 20 U - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 21 4.16721 3.91895 4.71969 0.04529 21 U - - - 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 22 4.54221 0.10335 4.37790 2.59045 22 C - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 23 4.72551 0.05637 4.57411 3.33467 23 C - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 24 1.75557 2.52868 1.10331 0.87790 24 u - - - 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 25 4.16721 3.91895 4.71969 0.04529 25 U - - - 1.38629 1.38629 1.38629 1.38629 0.43397 4.80219 1.06753 1.46634 0.26236 1.09861 0.40547 26 0.05802 4.17175 3.81951 3.96301 26 A - - - 1.38629 1.38629 1.38629 1.38629 0.02503 4.39325 4.39325 1.46634 0.26236 0.04666 3.08818 27 0.02957 4.84013 4.45825 4.64055 27 A - - - 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 28 0.02957 4.84013 4.45825 4.64055 28 A - - - 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 29 4.10848 0.08421 4.58638 2.91623 29 C - - - 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 30 4.07996 0.08836 4.56595 2.86010 30 C - - - 1.38629 1.38629 1.38629 1.38629 0.29715 3.51984 1.48077 0.48489 0.95650 1.09861 0.40547 31 3.31427 4.33833 0.06563 4.26144 32 G - - < 1.38629 1.38629 1.38629 1.38629 0.02126 4.55469 4.55469 1.46634 0.26236 0.06972 2.69799 32 2.46033 1.83431 1.39208 0.68060 33 U - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 33 3.58105 0.50168 3.37671 1.10117 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 34 3.70953 0.59368 3.52347 0.93211 35 C - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 35 4.87195 0.04240 4.84985 3.64856 36 C - - < 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 36 3.09947 1.42903 3.66378 0.37143 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 37 4.16721 3.91895 4.71969 0.04529 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 38 4.10610 0.08455 4.58467 2.91150 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 39 4.17193 5.21187 0.03061 4.68086 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04941 3.21885 4.80219 0.36970 1.17421 1.09861 0.40547 40 3.83672 4.87811 0.04005 4.59692 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 41 0.98441 3.63081 0.56772 3.41044 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 42 1.22614 3.45972 0.45209 3.24822 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 43 1.05270 1.52398 1.17067 2.09554 45 a - - > 1.38629 1.38629 1.38629 1.38629 0.01656 4.80219 4.80219 1.46634 0.26236 1.09861 0.40547 44 3.02055 0.27571 3.47971 1.82401 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.00831 4.79395 * 1.46634 0.26236 0.00000 * //