INFERNAL1/a [1.1.5 | Sep 2023] NAME ceN54 ACC RF01642 DESC Caenorhabditis snoRNA ceN54 STATES 208 NODES 68 CLEN 68 W 85 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 08:43:12 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01642/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.795898 CKSUM 1212158984 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 62.00 NC 45.50 EFP7GF -9.0939 0.71880 ECMLC 0.64267 -7.27842 2.20027 1600000 530588 0.002262 ECMGC 0.37854 -18.19426 -3.24742 1600000 114630 0.003489 ECMLI 0.65002 -5.03763 3.66182 1600000 342800 0.003501 ECMGI 0.43971 -11.43039 0.61791 1600000 79954 0.005003 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 85 106 -6.892 -7.099 -0.055 -5.513 IL 1 1 2 1 4 1 26 89 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 26 88 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 26 85 106 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 4 2 3 5 3 0 20 84 104 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 25 87 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 25 84 105 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 7 5 3 8 3 0 19 83 103 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 24 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 5 1 24 83 103 -7.048 -0.040 -6.864 -7.076 -7.968 -0.386 -0.852 -0.128 0.820 D 10 8 3 11 5 0 19 82 102 -4.959 -0.803 -4.221 -2.596 -2.508 IL 11 11 3 11 5 1 23 83 104 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 68 U A - - MP 12 11 3 16 6 2 23 82 102 -9.086 -9.026 -0.021 -7.802 -8.082 -8.477 -4.085 -3.906 -3.934 -0.209 -2.899 -4.508 1.427 -3.588 -3.940 0.061 -4.319 -1.809 3.275 -4.240 -0.578 -2.775 ML 13 11 3 16 6 1 20 81 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 18 81 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 16 79 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 21 82 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 21 81 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 67 G U - - MP 18 17 6 22 4 2 22 80 100 -6.892 -7.099 -0.055 -5.513 -3.552 -2.346 -3.713 1.172 -4.377 -5.101 0.005 -3.745 -3.393 1.445 -3.910 3.012 -0.355 -4.323 -1.936 -2.427 ML 19 17 6 22 4 1 19 80 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 17 80 100 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 15 79 99 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 20 81 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 24 23 6 26 3 1 20 78 98 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 25 23 6 26 3 0 14 76 97 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 27 26 3 29 3 1 19 77 97 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 28 26 3 29 3 0 14 75 96 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 18 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 30 29 3 32 3 1 18 76 96 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 31 29 3 32 3 0 13 74 95 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 18 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 33 32 3 35 3 1 18 75 95 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 34 32 3 35 3 0 12 73 93 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 17 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 36 35 3 38 3 1 17 74 94 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 37 35 3 38 3 0 11 72 92 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 39 38 3 41 3 1 16 73 93 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 40 38 3 41 3 0 11 71 91 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 15 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 42 41 3 44 3 1 15 72 92 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 43 41 3 44 3 0 10 70 90 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 45 44 3 47 3 1 15 70 91 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 46 44 3 47 3 0 9 69 89 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 14 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - g - - - ML 48 47 3 50 3 1 14 69 90 -7.913 -0.021 -6.567 0.348 -1.460 0.859 -0.864 D 49 47 3 50 3 0 8 68 88 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 13 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - c - - - ML 51 50 3 53 3 1 13 68 89 -7.913 -0.021 -6.567 -0.724 0.775 -1.516 0.416 D 52 50 3 53 3 0 8 67 87 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 12 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - a - - - ML 54 53 3 56 3 1 13 67 87 -7.913 -0.021 -6.567 0.860 -0.923 -1.039 0.228 D 55 53 3 56 3 0 7 66 86 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 11 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 57 56 3 59 3 1 12 66 86 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 58 56 3 59 3 0 6 65 85 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 60 59 3 62 3 1 11 65 85 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 61 59 3 62 3 0 5 64 84 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 63 62 3 65 3 1 10 64 84 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 64 62 3 65 3 0 5 63 83 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 66 65 3 68 3 1 10 63 83 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 67 65 3 68 3 0 4 62 82 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 69 68 3 71 3 1 9 62 82 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 70 68 3 71 3 0 3 61 81 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 72 71 3 74 3 1 8 61 81 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 73 71 3 74 3 0 2 60 80 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 75 74 3 77 3 1 8 60 80 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 76 74 3 77 3 0 2 59 79 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 6 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 78 77 3 80 3 1 7 59 79 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 79 77 3 80 3 0 1 58 78 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 81 80 3 83 3 1 6 58 78 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 82 80 3 83 3 0 0 56 76 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 84 83 3 86 3 1 6 57 77 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 85 83 3 86 3 0 0 55 75 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 4 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 87 86 3 89 3 1 5 56 76 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 88 86 3 89 3 0 0 54 74 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 90 89 3 92 3 1 5 55 75 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 91 89 3 92 3 0 0 53 73 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 3 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 93 92 3 95 3 1 4 54 74 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 94 92 3 95 3 0 0 52 72 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 96 95 3 98 3 1 4 53 72 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 97 95 3 98 3 0 0 51 71 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - C - - - ML 99 98 3 101 3 1 3 52 71 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 100 98 3 101 3 0 0 50 70 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 102 101 3 104 3 1 3 51 70 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 103 101 3 104 3 0 0 49 69 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - C - - - ML 105 104 3 107 3 1 2 50 69 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 106 104 3 107 3 0 0 48 68 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - U - - - ML 108 107 3 110 3 1 2 48 68 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 109 107 3 110 3 0 0 47 67 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - G - - - ML 111 110 3 113 3 1 2 47 67 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 112 110 3 113 3 0 0 46 66 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - A - - - ML 114 113 3 116 3 1 1 46 66 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 115 113 3 116 3 0 0 45 65 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 117 116 3 119 3 1 1 45 65 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 118 116 3 119 3 0 0 44 64 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - U - - - ML 120 119 3 122 3 1 1 44 64 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 121 119 3 122 3 0 0 43 63 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - a - - - ML 123 122 3 125 3 1 1 43 63 -7.913 -0.021 -6.567 0.911 -0.167 -1.072 -0.408 D 124 122 3 125 3 0 0 42 61 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - U - - - ML 126 125 3 128 3 1 1 42 62 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 127 125 3 128 3 0 0 41 60 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - u - - - ML 129 128 3 131 3 1 1 41 60 -7.913 -0.021 -6.567 -0.697 0.073 -1.451 0.975 D 130 128 3 131 3 0 0 40 59 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - c - - - ML 132 131 3 134 3 1 1 40 59 -7.913 -0.021 -6.567 -0.727 0.782 -1.519 0.408 D 133 131 3 134 3 0 0 39 58 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - A - - - ML 135 134 3 137 3 1 1 39 58 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 136 134 3 137 3 0 0 38 57 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - U - - - ML 138 137 3 140 3 1 1 38 57 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 139 137 3 140 3 0 0 36 56 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - G - - - ML 141 140 3 143 3 1 1 37 56 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 142 140 3 143 3 0 0 35 55 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - A - - - ML 144 143 3 146 3 1 1 36 55 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 145 143 3 146 3 0 0 34 54 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - A - - - ML 147 146 3 149 3 1 1 35 54 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 148 146 3 149 3 0 0 33 53 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - u - - - ML 150 149 3 152 3 1 1 33 53 -7.913 -0.021 -6.567 0.234 0.008 -1.009 0.402 D 151 149 3 152 3 0 0 32 52 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - C - - - ML 153 152 3 155 3 1 1 32 52 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 154 152 3 155 3 0 0 31 50 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - G - - - ML 156 155 3 158 3 1 1 31 50 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 157 155 3 158 3 0 0 30 49 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - A - - - ML 159 158 3 161 3 1 1 30 49 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 160 158 3 161 3 0 0 29 48 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - U - - - ML 162 161 3 164 3 1 1 29 48 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 163 161 3 164 3 0 0 28 47 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - A - - - ML 165 164 3 167 3 1 1 28 47 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 166 164 3 167 3 0 0 27 46 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - A - - - ML 168 167 3 170 3 1 1 27 46 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 169 167 3 170 3 0 0 26 45 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 171 170 3 173 3 1 1 26 45 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 172 170 3 173 3 0 0 25 44 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - A - - - ML 174 173 3 176 3 1 1 25 44 -7.913 -0.021 -6.567 1.696 -2.267 -1.910 -1.800 D 175 173 3 176 3 0 0 24 43 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - U - - - ML 177 176 3 179 3 1 1 24 42 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 178 176 3 179 3 0 0 23 41 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - C - - - ML 180 179 3 182 3 1 1 22 41 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 181 179 3 182 3 0 0 21 40 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - C - - - ML 183 182 3 185 3 1 1 21 40 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 184 182 3 185 3 0 0 20 39 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - G - - - ML 186 185 3 188 3 1 1 20 39 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 187 185 3 188 3 0 0 19 38 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - U - - - ML 189 188 3 191 3 1 1 19 37 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 190 188 3 191 3 0 0 18 37 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - U - - - ML 192 191 3 194 3 1 1 18 36 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 193 191 3 194 3 0 0 17 36 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - C - - - ML 195 194 3 197 3 1 1 16 35 -7.913 -0.021 -6.567 -1.616 1.589 -2.436 -1.056 D 196 194 3 197 3 0 0 16 34 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - U - - - ML 198 197 3 200 3 1 1 15 33 -7.913 -0.021 -6.567 -1.391 -1.404 -2.119 1.590 D 199 197 3 200 3 0 0 15 33 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - G - - - ML 201 200 3 203 3 1 1 13 32 -7.913 -0.021 -6.567 -1.470 -2.673 1.697 -2.059 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - A - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 1.696 -2.267 -1.910 -1.800 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME ceN54 ACC RF01642 DESC Caenorhabditis snoRNA ceN54 LENG 68 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 08:43:12 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01642/CM NSEQ 3 EFFN 1.848633 CKSUM 1212158984 STATS LOCAL MSV -8.2839 0.71880 STATS LOCAL VITERBI -8.9140 0.71880 STATS LOCAL FORWARD -3.9796 0.71880 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.28865 1.63060 1.47327 1.20608 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 0.00000 * 1 2.43593 3.27441 0.20242 2.84910 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 2 2.37650 2.38098 2.88296 0.27615 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 3 1.66175 1.98479 1.47394 0.81247 3 u - - : 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 4 2.70558 1.71037 2.42228 0.41000 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 5 1.81317 2.64009 0.37717 2.52940 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 6 2.37650 2.38098 2.88296 0.27615 6 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 7 2.43593 3.27441 0.20242 2.84910 7 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 8 0.20438 2.98678 2.73602 2.66541 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 9 2.37650 2.38098 2.88296 0.27615 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 10 2.43593 3.27441 0.20242 2.84910 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 11 0.20438 2.98678 2.73602 2.66541 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 12 2.54113 0.27494 3.11043 2.14538 12 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 13 2.37650 2.38098 2.88296 0.27615 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 14 1.14525 2.41193 0.78361 1.99909 14 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 15 1.90107 0.84170 2.45154 1.09826 15 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 16 0.78624 2.03292 2.11454 1.22825 16 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 17 2.37650 2.38098 2.88296 0.27615 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 18 0.20438 2.98678 2.73602 2.66541 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 19 2.54113 0.27494 3.11043 2.14538 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 20 2.43593 3.27441 0.20242 2.84910 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 21 2.43593 3.27441 0.20242 2.84910 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 22 0.20438 2.98678 2.73602 2.66541 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 23 2.37650 2.38098 2.88296 0.27615 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 24 2.54113 0.27494 3.11043 2.14538 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 25 0.20438 2.98678 2.73602 2.66541 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 26 2.54113 0.27494 3.11043 2.14538 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 27 2.37650 2.38098 2.88296 0.27615 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 28 2.43593 3.27441 0.20242 2.84910 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 29 2.43593 3.27441 0.20242 2.84910 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 30 2.43593 3.27441 0.20242 2.84910 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 31 2.54113 0.27494 3.11043 2.14538 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 32 2.37650 2.38098 2.88296 0.27615 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 33 2.54113 0.27494 3.11043 2.14538 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 34 2.37650 2.38098 2.88296 0.27615 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 35 2.43593 3.27441 0.20242 2.84910 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 36 0.20438 2.98678 2.73602 2.66541 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 37 0.20438 2.98678 2.73602 2.66541 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 38 2.37650 2.38098 2.88296 0.27615 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 39 0.74984 1.50039 2.13878 1.67816 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 40 2.37650 2.38098 2.88296 0.27615 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 41 1.88105 1.33376 2.40511 0.70556 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 42 1.90296 0.83638 2.45373 1.10374 42 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 43 0.20438 2.98678 2.73602 2.66541 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 44 2.37650 2.38098 2.88296 0.27615 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 45 2.43593 3.27441 0.20242 2.84910 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 46 0.20438 2.98678 2.73602 2.66541 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 47 0.20438 2.98678 2.73602 2.66541 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 48 1.22424 1.37795 2.09166 1.10733 48 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 49 2.54113 0.27494 3.11043 2.14538 49 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 50 2.43593 3.27441 0.20242 2.84910 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 51 0.20438 2.98678 2.73602 2.66541 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 52 2.37650 2.38098 2.88296 0.27615 52 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 53 0.20438 2.98678 2.73602 2.66541 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 54 0.20438 2.98678 2.73602 2.66541 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 55 2.37650 2.38098 2.88296 0.27615 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 56 0.20438 2.98678 2.73602 2.66541 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 57 2.37650 2.38098 2.88296 0.27615 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 58 2.54113 0.27494 3.11043 2.14538 58 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 59 2.54113 0.27494 3.11043 2.14538 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 60 2.43593 3.27441 0.20242 2.84910 60 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 61 2.37650 2.38098 2.88296 0.27615 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 62 2.37650 2.38098 2.88296 0.27615 62 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 63 2.54113 0.27494 3.11043 2.14538 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 64 2.37650 2.38098 2.88296 0.27615 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 65 2.43593 3.27441 0.20242 2.84910 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 66 0.20438 2.98678 2.73602 2.66541 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 67 2.74292 1.69798 2.44257 0.40703 67 U - - > 1.38629 1.38629 1.38629 1.38629 0.04383 3.84243 3.84243 1.46634 0.26236 1.09861 0.40547 68 0.46727 2.59855 1.54706 2.45300 68 A - - > 1.38629 1.38629 1.38629 1.38629 0.02215 3.82076 * 1.46634 0.26236 0.00000 * //