INFERNAL1/a [1.1.5 | Sep 2023] NAME TB10Cs3H2 ACC RF01532 DESC Trypanosomatid snoRNA TB10Cs3H2 STATES 211 NODES 55 CLEN 69 W 88 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 01:46:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01532/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 1.995117 CKSUM 1802909049 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 50.60 NC 37.60 EFP7GF -8.9331 0.71906 ECMLC 0.59300 -6.94985 2.64539 1600000 355070 0.003380 ECMGC 0.40658 -16.39277 -3.01055 1600000 92263 0.004335 ECMLI 0.56027 -5.20756 3.93796 1600000 201597 0.005952 ECMGI 0.43627 -11.40798 0.29658 1600000 66027 0.006058 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 88 110 -6.975 -7.182 -0.052 -5.596 IL 1 1 2 1 4 1 26 92 114 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 91 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 25 88 110 -7.989 -0.020 -6.643 -0.774 0.024 -1.531 1.037 D 4 2 3 5 3 0 20 87 109 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 25 90 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 24 87 109 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 7 5 3 8 3 0 19 86 108 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 24 89 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 24 86 108 -7.989 -0.020 -6.643 -0.780 0.778 -1.579 0.452 D 10 8 3 11 3 0 18 85 107 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 23 88 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 23 85 107 -7.989 -0.020 -6.643 -0.070 0.026 -1.137 0.655 D 13 11 3 14 3 0 18 84 106 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 22 87 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 1 22 84 106 -7.989 -0.020 -6.643 0.298 -0.430 -0.061 0.097 D 16 14 3 17 3 0 17 83 105 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 21 86 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - g - - - ML 18 17 3 20 3 1 21 83 105 -7.989 -0.020 -6.643 -0.356 0.224 0.333 -0.339 D 19 17 3 20 3 0 16 82 104 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 20 85 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 20 82 104 -7.989 -0.020 -6.643 -1.802 1.640 -2.627 -1.203 D 22 20 3 23 3 0 15 81 103 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 20 84 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 24 23 3 26 3 1 19 81 103 -8.378 -0.018 -6.696 0.901 -0.971 -1.087 0.204 D 25 23 3 26 3 0 14 80 102 -5.620 -0.734 -1.403 IL 26 26 3 26 3 1 18 82 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 73 - u - - MR 27 26 3 29 3 1 19 80 102 -8.378 -0.018 -6.696 -0.420 -0.334 -0.641 0.862 D 28 26 3 29 3 0 12 79 100 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 17 81 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 72 - A - - MR 30 29 3 32 3 1 18 79 101 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 31 29 3 32 3 0 11 78 99 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 17 80 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 71 - G - - MR 33 32 3 35 3 1 17 78 100 -8.378 -0.018 -6.696 -1.634 -2.862 1.735 -2.249 D 34 32 3 35 3 0 10 77 98 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 16 79 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 70 - A - - MR 36 35 3 38 3 1 17 77 99 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 37 35 3 38 3 0 9 76 98 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 15 78 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 69 - G - - MR 39 38 3 41 5 1 16 76 98 -7.115 -0.038 -6.931 -7.143 -8.034 -1.634 -2.862 1.735 -2.249 D 40 38 3 41 5 0 8 75 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 13 77 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 68 G C - - MP 42 41 3 46 6 2 17 75 97 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.794 -3.119 -4.898 0.165 -5.307 -4.714 -0.658 -5.145 -4.362 3.651 -4.695 -0.820 -1.042 -4.502 -2.698 -3.774 ML 43 41 3 46 6 1 10 74 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 10 74 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 6 71 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 12 75 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 12 75 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 67 C G - - MP 48 47 6 52 6 2 15 73 95 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 49 47 6 52 6 1 10 72 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 9 72 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 5 69 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 11 73 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 12 73 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 66 c g - - MP 54 53 6 58 6 2 14 71 93 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.318 -3.058 -3.320 1.580 -2.621 -4.057 2.655 -3.174 -3.319 0.988 -3.781 -0.940 1.181 -3.527 -0.302 -2.224 ML 55 53 6 58 6 1 9 70 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 8 70 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 5 67 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 11 71 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 11 71 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 65 g c - - MP 60 59 6 64 6 2 12 69 91 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -2.660 -0.591 -2.755 1.394 -2.761 -3.522 1.674 -3.036 -2.851 2.249 -3.330 -0.239 0.948 -2.825 -0.591 -1.827 ML 61 59 6 64 6 1 8 68 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 7 68 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 5 66 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 9 69 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 9 69 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 64 C G - - MP 66 65 6 70 4 2 10 67 89 -2.384 -7.182 -0.357 -5.596 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 67 65 6 70 4 1 7 66 88 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 6 66 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 5 65 87 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 9 67 89 -2.548 -3.232 -0.507 -5.717 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 8 67 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 15 - u - - - ML 72 71 6 74 3 1 8 64 86 -8.378 -0.018 -6.696 -0.092 0.003 -1.146 0.686 D 73 71 6 74 3 0 4 63 85 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 7 65 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 63 - U - - MR 75 74 3 77 5 1 8 63 85 -7.115 -0.038 -6.931 -7.143 -8.034 -1.532 -1.520 -2.268 1.631 D 76 74 3 77 5 0 2 62 84 -5.352 -0.707 -2.978 -4.409 -2.404 IR 77 77 3 77 5 1 6 64 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 62 C G - - MP 78 77 3 82 6 2 8 62 84 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 79 77 3 82 6 1 4 61 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 3 61 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 59 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 5 62 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 5 62 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 61 C G - - MP 84 83 6 88 4 2 6 60 82 -6.975 -7.182 -0.052 -5.596 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 85 83 6 88 4 1 3 60 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 4 1 1 60 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 87 83 6 88 4 0 0 59 81 -4.568 -4.250 -2.265 -0.520 IL 88 88 5 88 4 1 5 62 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 89 89 6 89 3 1 4 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 18 - G - - - ML 90 89 6 92 3 1 5 58 80 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 91 89 6 92 3 0 0 57 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 4 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 19 - G - - - ML 93 92 3 95 3 1 4 57 79 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 94 92 3 95 3 0 0 56 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 3 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 20 - G - - - ML 96 95 3 98 3 1 4 56 78 -7.989 -0.020 -6.643 -1.634 -2.862 1.735 -2.249 D 97 95 3 98 3 0 0 55 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 3 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 21 - C - - - ML 99 98 3 101 3 1 3 55 77 -7.989 -0.020 -6.643 -1.802 1.640 -2.627 -1.203 D 100 98 3 101 3 0 0 54 75 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 2 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 22 - A - - - ML 102 101 3 104 3 1 3 54 76 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 103 101 3 104 3 0 0 53 75 -5.620 -0.734 -1.403 IL 104 104 3 104 3 1 1 55 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 60 - C - - MR 105 104 3 107 3 1 2 53 75 -8.378 -0.018 -6.696 -1.802 1.640 -2.627 -1.203 D 106 104 3 107 3 0 0 51 73 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 54 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 59 - U - - MR 108 107 3 110 3 1 2 52 74 -8.378 -0.018 -6.696 -1.532 -1.520 -2.268 1.631 D 109 107 3 110 3 0 0 50 72 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 53 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 58 - A - - MR 111 110 3 113 3 1 2 51 73 -8.378 -0.018 -6.696 1.730 -2.422 -2.049 -1.969 D 112 110 3 113 3 0 0 50 71 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 52 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 57 - A - - MR 114 113 3 116 5 1 1 50 72 -7.115 -0.038 -6.931 -7.143 -8.034 1.730 -2.422 -2.049 -1.969 D 115 113 3 116 5 0 0 49 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 50 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 56 G C - - MP 117 116 3 121 6 2 2 49 71 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.925 -2.659 -3.956 0.832 -4.600 -4.517 -0.061 -4.302 -3.859 3.231 -4.264 1.065 -0.346 -3.933 -2.037 -2.852 ML 118 116 3 121 6 1 1 48 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 47 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 45 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 49 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 48 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 24 55 G C - - MP 123 122 6 127 6 2 2 47 69 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.794 -3.119 -4.898 0.165 -5.307 -4.714 -0.658 -5.145 -4.362 3.651 -4.695 -0.820 -1.042 -4.502 -2.698 -3.774 ML 124 122 6 127 6 1 1 46 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 45 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 43 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 47 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 46 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 54 A U - - MP 129 128 6 133 6 2 2 45 67 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.839 -2.858 -3.854 3.362 -4.216 -5.283 0.087 -3.893 -3.744 1.027 -4.294 -0.326 -0.331 -4.463 -1.854 -2.685 ML 130 128 6 133 6 1 1 44 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 44 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 41 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 45 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 44 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 53 u g - - MP 135 134 6 139 6 2 2 43 65 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -3.946 -3.958 -3.704 -0.296 -2.506 -4.151 2.230 -3.277 -3.751 -0.087 -4.067 -2.059 0.986 -4.031 2.686 -2.628 ML 136 134 6 139 6 1 1 42 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 42 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 40 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 43 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 43 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 27 52 g c - - MP 141 140 6 145 4 2 2 41 63 -6.975 -7.182 -0.052 -5.596 -2.890 -2.223 -3.007 1.095 -3.243 -3.733 0.712 -3.328 -0.440 2.679 -3.480 1.026 0.457 -3.072 -1.073 -2.051 ML 142 140 6 145 4 1 1 41 63 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 4 1 1 41 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 144 140 6 145 4 0 0 40 61 -4.568 -4.250 -2.265 -0.520 IL 145 145 5 145 4 1 1 42 64 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 146 146 6 146 3 1 1 42 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 28 - a - - - ML 147 146 6 149 3 1 1 39 61 -8.378 -0.018 -6.696 0.389 -0.612 0.350 -0.393 D 148 146 6 149 3 0 0 38 59 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 40 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 51 - g - - MR 150 149 3 152 3 1 1 38 60 -8.378 -0.018 -6.696 0.274 -1.567 0.959 -0.974 D 151 149 3 152 3 0 0 36 58 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 39 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 50 - u - - MR 153 152 3 155 3 1 1 37 59 -8.378 -0.018 -6.696 -0.268 -0.426 0.233 0.322 D 154 152 3 155 3 0 0 35 57 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 38 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 49 - U - - MR 156 155 3 158 5 1 1 36 58 -2.676 -0.279 -6.931 -7.143 -8.034 -0.764 0.070 -1.523 1.010 D 157 155 3 158 5 0 0 34 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 158 158 3 158 5 1 1 36 58 -2.919 -0.330 -6.431 -4.598 -5.704 0.000 0.000 0.000 0.000 [ MATP 41 ] 29 47 C G - - MP 159 158 3 163 6 2 2 35 56 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 160 158 3 163 6 1 1 33 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 3 163 6 1 1 33 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 3 163 6 0 0 31 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 34 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 34 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 30 46 G C - - MP 165 164 6 169 6 2 2 33 54 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.794 -3.119 -4.898 0.165 -5.307 -4.714 -0.658 -5.145 -4.362 3.651 -4.695 -0.820 -1.042 -4.502 -2.698 -3.774 ML 166 164 6 169 6 1 1 31 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 31 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 29 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 32 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 32 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 31 45 C G - - MP 171 170 6 175 6 2 2 31 52 -9.118 -9.057 -0.021 -7.833 -8.113 -8.508 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 172 170 6 175 6 1 1 30 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 29 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 28 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 30 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 30 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 32 44 C G - - MP 177 176 6 181 4 2 2 29 50 -6.975 -7.182 -0.052 -5.596 -4.609 -4.520 -4.289 -0.746 -2.993 -4.693 3.569 -3.809 -4.340 -0.515 -4.594 -2.468 0.515 -4.674 -0.701 -3.177 ML 178 176 6 181 4 1 1 29 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 4 1 1 28 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 180 176 6 181 4 0 0 27 49 -4.568 -4.250 -2.265 -0.520 IL 181 181 5 181 4 1 1 30 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 182 182 6 182 3 1 1 29 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 33 - C - - - ML 183 182 6 185 3 1 1 26 48 -2.518 -0.464 -3.319 -0.680 1.032 -0.771 -0.424 D 184 182 6 185 3 0 0 23 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 49 -1.228 -0.885 -4.995 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - G - - - ML 186 185 3 188 3 1 1 21 40 -7.853 -0.022 -6.507 -1.342 -2.523 1.662 -1.908 D 187 185 3 188 3 0 0 20 39 -7.060 -2.573 -0.278 IL 188 188 3 188 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - u - - - ML 189 188 3 191 3 1 1 20 39 -7.853 -0.183 -3.122 -0.626 0.208 -1.383 0.859 D 190 188 3 191 3 0 0 19 38 -7.060 -0.673 -1.452 IL 191 191 3 191 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - G - - - ML 192 191 3 194 3 1 1 19 37 -7.846 -0.022 -6.500 -1.327 -2.506 1.658 -1.891 D 193 191 3 194 3 0 0 18 37 -7.092 -0.655 -1.483 IL 194 194 3 194 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - u - - - ML 195 194 3 197 3 1 1 18 36 -7.989 -0.020 -6.643 -0.302 -0.385 -0.162 0.613 D 196 194 3 197 3 0 0 17 36 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - c - - - ML 198 197 3 200 3 1 1 16 35 -7.989 -0.020 -6.643 -0.780 0.778 -1.579 0.452 D 199 197 3 200 3 0 0 16 34 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - c - - - ML 201 200 3 203 3 1 1 15 33 -7.989 -0.020 -6.643 -0.422 0.583 -0.076 -0.309 D 202 200 3 203 3 0 0 15 33 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - u - - - ML 204 203 3 206 3 1 1 13 31 -7.989 -0.020 -6.643 -0.025 -0.800 -0.498 0.795 D 205 203 3 206 3 0 0 13 32 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 43 - U - - - ML 207 206 3 209 2 1 1 1 1 * 0.000 -1.532 -1.520 -2.268 1.631 D 208 206 3 209 2 0 0 0 0 * 0.000 IL 209 209 3 209 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 54 ] - - - - - - E 210 209 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME TB10Cs3H2 ACC RF01532 DESC Trypanosomatid snoRNA TB10Cs3H2 LENG 69 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 11 01:46:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01532/CM NSEQ 6 EFFN 2.727539 CKSUM 1802909049 STATS LOCAL MSV -8.9220 0.71906 STATS LOCAL VITERBI -8.9971 0.71906 STATS LOCAL FORWARD -3.0469 0.71906 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.69383 1.27555 1.10000 1.58944 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 0.00000 * 1 2.08126 1.34965 2.61820 0.61072 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 2 2.88127 3.78267 0.12066 3.35702 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 3 2.08877 0.76538 2.66411 1.07486 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 4 1.46340 1.33569 2.26335 0.91237 4 u - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 5 1.18032 1.69087 1.40334 1.33680 5 a - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 6 1.74720 1.17239 1.07995 1.73444 6 g - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 7 3.06221 0.16267 3.63741 2.56360 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 8 0.71164 2.15585 2.24326 1.24743 8 a - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 9 2.69991 3.41854 0.14484 3.35616 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 10 3.38097 0.19965 3.17677 2.25147 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 11 1.51855 0.80599 1.95480 1.64646 11 c - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 12 1.45623 1.49624 1.00574 1.73082 12 g - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 13 3.37883 0.19984 3.17570 2.25108 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.26646 1.53416 4.00231 0.16163 1.90216 1.09861 0.40547 14 1.48158 1.35486 2.27104 0.88786 15 u - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 15 3.37781 0.19993 3.17518 2.25089 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 16 3.38045 0.19969 3.17651 2.25137 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 17 2.88127 3.78267 0.12066 3.35702 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 18 2.88127 3.78267 0.12066 3.35702 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 19 2.88127 3.78267 0.12066 3.35702 20 G - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 20 3.06221 0.16267 3.63741 2.56360 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 21 0.12788 3.41750 3.12443 3.13992 22 A - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 22 2.15804 2.90537 0.26565 2.76440 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 23 2.70104 3.41998 0.14462 3.35813 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 24 0.27530 2.99468 1.99138 2.91700 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 25 3.02688 1.20819 2.83202 0.52104 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 26 1.89491 2.32699 0.44856 2.17565 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 27 1.11788 1.82972 1.08286 1.74904 28 g - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 28 3.36057 0.20151 3.16650 2.24775 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 29 2.69571 3.41319 0.14567 3.34882 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 30 3.37309 0.20036 3.17282 2.25004 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 31 3.37441 0.20024 3.17348 2.25028 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 32 2.05710 0.55136 1.98703 1.83943 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.41278 1.53416 2.09917 0.75274 0.63691 1.09861 0.40547 33 2.65534 3.52695 0.15619 3.10247 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04166 3.89218 3.89218 1.46634 0.26236 2.16412 0.12200 34 1.94968 1.20112 2.48747 0.74717 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.17765 3.89218 1.94935 1.46634 0.26236 0.26098 1.47097 35 2.64372 3.51368 0.15832 3.08919 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04189 3.88663 3.88663 1.46634 0.26236 0.25200 1.50169 36 1.66413 1.66536 1.47079 0.93706 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 37 2.08877 0.76538 2.66411 1.07486 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 38 1.80756 0.88952 1.40741 1.71303 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 39 1.42778 2.02144 1.74075 0.79340 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 40 2.77842 2.71403 3.30208 0.18058 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 41 2.52639 3.33765 0.17317 3.13409 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 42 2.52468 3.33517 0.17359 3.13120 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 43 3.52054 0.17459 3.24359 2.39039 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 44 2.51452 3.32053 0.17608 3.11413 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.26646 1.53416 4.00231 0.16163 1.90216 1.09861 0.40547 45 2.07215 1.31279 2.61098 0.63195 49 U - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 46 1.64288 1.69331 1.16632 1.16745 50 g - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 47 1.20543 2.65342 0.64438 2.25345 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 48 1.95830 0.79439 2.13400 1.24243 52 c - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 49 2.12772 2.98803 0.26291 2.78560 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 50 3.14526 2.30692 2.80604 0.22699 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 51 3.56443 0.17125 3.26378 2.39871 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 52 3.00553 0.45957 2.72466 1.37292 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 53 0.12788 3.41750 3.12443 3.13992 57 A - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 54 0.12788 3.41750 3.12443 3.13992 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 55 2.77842 2.71403 3.30208 0.18058 59 U - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 56 3.06221 0.16267 3.63741 2.56360 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 57 2.53423 3.34901 0.17127 3.14737 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 58 2.53659 3.35243 0.17070 3.15139 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 59 2.77842 2.71403 3.30208 0.18058 63 U - - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 60 2.53042 3.34347 0.17219 3.14090 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 61 1.96398 1.01293 1.36117 1.42634 65 c - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 62 1.89145 2.13454 0.72593 1.39848 66 g - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 63 2.53433 3.34914 0.17125 3.14754 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 64 3.57238 0.17066 3.26739 2.40019 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 65 2.88127 3.78267 0.12066 3.35702 69 G - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 66 0.12788 3.41750 3.12443 3.13992 70 A - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 67 2.88127 3.78267 0.12066 3.35702 71 G - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 68 0.12788 3.41750 3.12443 3.13992 72 A - - : 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 69 1.76503 1.63149 1.84827 0.74303 73 u - - : 1.38629 1.38629 1.38629 1.38629 0.01879 3.98387 * 1.46634 0.26236 0.00000 * //