INFERNAL1/a [1.1.5 | Sep 2023] NAME sR46 ACC RF01130 DESC Small nucleolar RNA sR46 STATES 172 NODES 53 CLEN 56 W 99 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 16:36:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01130/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 2.963379 CKSUM 112072993 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 71.30 NC 37.60 EFP7GF -10.0649 0.71913 ECMLC 0.66602 -9.42144 0.38349 1600000 822742 0.001459 ECMGC 0.42159 -19.46295 -5.47762 1600000 145436 0.002750 ECMLI 0.63971 -8.14752 1.36360 1600000 526704 0.002278 ECMGI 0.43945 -15.57216 -3.06753 1600000 97401 0.004107 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 99 154 -7.319 -7.526 -0.041 -5.941 IL 1 1 2 1 4 1 20 101 156 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 101 156 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 19 99 154 -8.682 -0.015 -7.000 -0.388 -0.163 0.190 0.265 D 4 2 3 5 3 0 15 98 152 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 18 100 154 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 61 - C - - MR 6 5 3 8 3 1 18 98 153 -8.682 -0.015 -7.000 -2.592 1.791 -3.418 -1.841 D 7 5 3 8 3 0 14 96 151 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 17 99 153 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 60 - G - - MR 9 8 3 11 3 1 17 97 152 -8.682 -0.015 -7.000 -2.301 -3.618 1.844 -3.002 D 10 8 3 11 3 0 13 95 150 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 17 98 152 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 59 - A - - MR 12 11 3 14 3 1 16 96 151 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 13 11 3 14 3 0 12 94 149 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 16 97 151 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 58 - G - - MR 15 14 3 17 3 1 15 95 150 -8.682 -0.015 -7.000 -2.301 -3.618 1.844 -3.002 D 16 14 3 17 3 0 12 93 148 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 15 96 150 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 57 - U - - MR 18 17 3 20 3 1 14 94 149 -8.682 -0.015 -7.000 -1.092 -0.005 -1.868 1.177 D 19 17 3 20 3 0 11 92 147 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 14 95 149 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 56 - C - - MR 21 20 3 23 3 1 13 93 148 -8.682 -0.425 -1.986 -2.592 1.791 -3.418 -1.841 D 22 20 3 23 3 0 10 91 146 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 15 94 149 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 55 - G - - MR 24 23 3 26 3 1 14 93 148 -8.277 -0.020 -6.595 -1.403 -2.595 1.679 -1.980 D 25 23 3 26 3 0 10 90 145 -8.221 -3.399 -0.149 IR 26 26 3 26 3 1 14 93 148 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 54 - G - - MR 27 26 3 29 3 1 14 92 147 -8.277 -0.020 -6.595 -1.403 -2.595 1.679 -1.980 D 28 26 3 29 3 0 9 90 144 -8.221 -3.399 -0.149 IR 29 29 3 29 3 1 13 92 147 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 53 - U - - MR 30 29 3 32 3 1 13 91 146 -8.277 -0.020 -6.595 -1.334 -1.357 -2.059 1.572 D 31 29 3 32 3 0 9 90 144 -8.221 -0.297 -2.451 IR 32 32 3 32 3 1 12 91 146 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 52 - g - - MR 33 32 3 35 3 1 12 90 145 -8.682 -0.015 -7.000 -0.586 0.061 0.722 -0.641 D 34 32 3 35 3 0 6 88 142 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 11 90 145 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 51 - A - - MR 36 35 3 38 3 1 11 89 144 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 37 35 3 38 3 0 5 87 141 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 10 89 144 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 50 - g - - MR 39 38 3 41 3 1 10 88 143 -8.682 -0.015 -7.000 0.586 -1.778 0.826 -1.203 D 40 38 3 41 3 0 4 86 140 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 9 88 143 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 49 - A - - MR 42 41 3 44 3 1 10 87 142 -8.682 -0.015 -7.000 1.481 -1.993 -0.718 -1.521 D 43 41 3 44 3 0 3 85 139 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 8 87 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 48 - C - - MR 45 44 3 47 3 1 9 86 141 -8.682 -0.015 -7.000 -2.592 1.791 -3.418 -1.841 D 46 44 3 47 3 0 3 84 138 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 7 86 141 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 47 - C - - MR 48 47 3 50 3 1 8 85 140 -8.682 -0.015 -7.000 -2.592 1.791 -3.418 -1.841 D 49 47 3 50 3 0 2 83 137 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 7 85 140 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 46 - C - - MR 51 50 3 53 3 1 7 84 139 -8.682 -0.015 -7.000 -2.592 1.791 -3.418 -1.841 D 52 50 3 53 3 0 1 82 136 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 6 84 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 45 - C - - MR 54 53 3 56 3 1 7 83 138 -8.682 -0.015 -7.000 -2.592 1.791 -3.418 -1.841 D 55 53 3 56 3 0 1 81 135 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 5 83 138 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 44 - a - - MR 57 56 3 59 3 1 6 82 137 -8.682 -0.015 -7.000 0.928 -1.719 0.427 -1.154 D 58 56 3 59 3 0 0 80 134 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 4 82 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 43 - g - - MR 60 59 3 62 3 1 5 81 136 -8.682 -0.015 -7.000 0.586 -1.778 0.826 -1.203 D 61 59 3 62 3 0 0 79 133 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 4 81 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 42 - u - - MR 63 62 3 65 3 1 5 80 135 -8.682 -0.015 -7.000 -0.572 -1.102 0.195 0.780 D 64 62 3 65 3 0 0 78 132 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 3 80 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 41 - U - - MR 66 65 3 68 3 1 4 79 134 -8.682 -0.015 -7.000 -2.147 -2.031 -2.907 1.764 D 67 65 3 68 3 0 0 77 131 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 2 79 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 40 - A - - MR 69 68 3 71 3 1 4 78 133 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 70 68 3 71 3 0 0 76 130 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 2 78 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 39 - G - - MR 72 71 3 74 3 1 3 77 132 -8.682 -0.015 -7.000 -2.301 -3.618 1.844 -3.002 D 73 71 3 74 3 0 0 75 129 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 77 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 38 - U - - MR 75 74 3 77 3 1 3 76 131 -8.682 -0.015 -7.000 -2.147 -2.031 -2.907 1.764 D 76 74 3 77 3 0 0 73 128 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 76 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 37 - A - - MR 78 77 3 80 3 1 2 75 130 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 79 77 3 80 3 0 0 71 126 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 75 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 36 - G - - MR 81 80 3 83 3 1 2 74 129 -1.957 -0.445 -7.000 0.186 -1.942 1.148 -1.372 D 82 80 3 83 3 0 0 64 119 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 2 77 132 -0.486 -1.851 -6.802 0.000 0.000 0.000 0.000 [ MATR 28 ] - 30 - a - - MR 84 83 3 86 3 1 2 43 62 -8.682 -0.015 -7.000 0.512 -0.990 -0.101 0.187 D 85 83 3 86 3 0 0 42 61 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 29 - c - - MR 87 86 3 89 3 1 1 42 61 -8.682 -0.015 -7.000 -0.605 0.564 0.222 -0.519 D 88 86 3 89 3 0 0 41 60 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 28 - g - - MR 90 89 3 92 3 1 1 41 60 -8.682 -0.015 -7.000 -0.036 -0.209 0.241 -0.032 D 91 89 3 92 3 0 0 40 59 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 27 - A - - MR 93 92 3 95 3 1 1 40 59 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 94 92 3 95 3 0 0 39 58 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 26 - G - - MR 96 95 3 98 3 1 1 39 58 -8.682 -0.015 -7.000 -2.301 -3.618 1.844 -3.002 D 97 95 3 98 3 0 0 38 57 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 25 - U - - MR 99 98 3 101 5 1 1 38 57 -7.401 -0.031 -7.217 -7.429 -8.321 -2.147 -2.031 -2.907 1.764 D 100 98 3 101 5 0 0 37 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 2 24 G C - - MP 102 101 3 106 6 2 2 37 56 -9.261 -9.200 -0.019 -7.976 -8.256 -8.651 -5.419 -3.424 -5.615 -0.271 -6.178 -4.947 -1.373 -5.882 -4.742 3.766 -5.036 -1.157 -1.743 -4.903 -3.453 -4.482 ML 103 101 3 106 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 3 23 C G - - MP 108 107 6 112 4 2 2 35 54 -7.319 -7.526 -0.041 -5.941 -5.323 -5.294 -4.876 -1.474 -3.446 -5.185 3.733 -4.334 -4.962 -1.321 -5.128 -3.263 -0.024 -5.338 -1.183 -3.780 ML 109 107 6 112 4 1 1 36 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 36 55 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 35 54 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 37 57 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 4 - G - - - ML 114 113 6 116 3 1 1 33 52 -8.312 -0.016 -6.966 0.186 -1.942 1.148 -1.372 D 115 113 6 116 3 0 0 32 51 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 5 - A - - - ML 117 116 3 119 3 1 1 32 51 -8.312 -0.016 -6.966 1.834 -3.076 -2.639 -2.690 D 118 116 3 119 3 0 0 31 50 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 6 - U - - - ML 120 119 3 122 3 1 1 31 49 -8.682 -0.015 -7.000 -2.147 -2.031 -2.907 1.764 D 121 119 3 122 3 0 0 29 48 -5.620 -0.734 -1.403 IL 122 122 3 122 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 22 - U - - MR 123 122 3 125 3 1 1 30 48 -8.682 -0.015 -7.000 -2.147 -2.031 -2.907 1.764 D 124 122 3 125 3 0 0 28 47 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 21 - A - - MR 126 125 3 128 3 1 1 29 47 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 127 125 3 128 3 0 0 27 46 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 20 - A - - MR 129 128 3 131 3 1 1 28 46 -8.682 -0.015 -7.000 1.834 -3.076 -2.639 -2.690 D 130 128 3 131 3 0 0 26 45 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 19 - C - - MR 132 131 3 134 5 1 1 27 45 -7.401 -0.031 -7.217 -7.429 -8.321 -2.592 1.791 -3.418 -1.841 D 133 131 3 134 5 0 0 25 44 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 7 18 G C - - MP 135 134 3 139 6 2 2 26 44 -9.261 -9.200 -0.019 -7.976 -8.256 -8.651 -5.419 -3.424 -5.615 -0.271 -6.178 -4.947 -1.373 -5.882 -4.742 3.766 -5.036 -1.157 -1.743 -4.903 -3.453 -4.482 ML 136 134 3 139 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 8 17 A U - - MP 141 140 6 145 6 2 2 24 42 -9.261 -9.200 -0.019 -7.976 -8.256 -8.651 -4.455 -3.335 -4.404 3.635 -5.104 -6.250 -0.758 -4.399 -4.292 0.358 -4.871 -0.719 -1.171 -5.309 -2.695 -3.215 ML 142 140 6 145 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 9 16 u a - - MP 147 146 6 151 4 2 2 22 40 -7.319 -7.526 -0.041 -5.941 -2.220 -2.374 -2.373 0.751 -0.312 -3.189 1.572 -2.567 0.427 0.718 -2.968 -0.862 2.193 -2.530 -0.146 -1.547 ML 148 146 6 151 4 1 1 23 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 150 146 6 151 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 151 151 5 151 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 152 152 6 152 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 10 - G - - - ML 153 152 6 155 3 1 1 19 37 -8.312 -0.016 -6.966 -2.301 -3.618 1.844 -3.002 D 154 152 6 155 3 0 0 18 37 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 11 - A - - - ML 156 155 3 158 3 1 1 17 36 -8.312 -0.016 -6.966 1.834 -3.076 -2.639 -2.690 D 157 155 3 158 3 0 0 17 36 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 12 - a - - - ML 159 158 3 161 3 1 1 16 34 -8.312 -0.016 -6.966 0.569 -0.708 0.298 -0.569 D 160 158 3 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 13 - U - - - ML 162 161 3 164 3 1 1 15 33 -8.312 -0.016 -6.966 -2.147 -2.031 -2.907 1.764 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 14 - G - - - ML 165 164 3 167 3 1 1 13 31 -8.312 -0.016 -6.966 -2.301 -3.618 1.844 -3.002 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 15 - A - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 1.834 -3.076 -2.639 -2.690 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sR46 ACC RF01130 DESC Small nucleolar RNA sR46 LENG 56 MAXL 141 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 16:36:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01130/CM NSEQ 7 EFFN 3.229980 CKSUM 112072993 STATS LOCAL MSV -7.8969 0.71913 STATS LOCAL VITERBI -8.5641 0.71913 STATS LOCAL FORWARD -3.7923 0.71913 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.25094 1.49263 1.27968 1.55658 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 0.00000 * 1 1.67874 1.49378 1.24009 1.20560 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 2 2.83726 3.62248 0.12073 3.56064 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 3 3.60219 0.16024 3.42191 2.42870 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 4 1.26090 2.79340 0.57110 2.40260 4 G - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 5 0.10257 3.62488 3.31300 3.36886 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 6 2.97767 2.88064 3.50735 0.14733 6 U - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 7 2.83836 3.62399 0.12054 3.56268 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 8 0.21365 3.26424 2.18660 3.17369 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 9 1.98059 1.37991 1.47012 0.96624 9 u - - < 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 10 3.08548 4.01035 0.09618 3.58048 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 11 0.10257 3.62488 3.31300 3.36886 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 12 0.98687 1.88381 1.16567 1.81072 12 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 13 2.97767 2.88064 3.50735 0.14733 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 14 3.08548 4.01035 0.09618 3.58048 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 15 0.10257 3.62488 3.31300 3.36886 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 16 0.79276 2.06256 1.36466 1.80297 16 a - - > 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 17 3.40370 2.52720 3.07562 0.17351 17 U - - > 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 18 3.77015 0.14291 3.47950 2.53452 18 C - - > 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 19 3.31047 0.12783 3.87791 2.76771 19 C - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 20 0.10257 3.62488 3.31300 3.36886 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 21 0.10257 3.62488 3.31300 3.36886 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 22 2.97767 2.88064 3.50735 0.14733 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 23 2.71391 3.59475 0.13697 3.37389 23 G - - > 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 24 3.76899 0.14298 3.47895 2.53431 24 C - - > 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 25 2.97767 2.88064 3.50735 0.14733 25 U - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 26 3.08548 4.01035 0.09618 3.58048 26 G - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 27 0.10257 3.62488 3.31300 3.36886 27 A - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 28 1.42126 1.52633 1.20599 1.41938 28 g - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 29 1.84783 0.97190 1.21624 1.78549 29 c - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 30 1.02685 2.09484 1.45172 1.25664 30 a - - : 1.38629 1.38629 1.38629 1.38629 0.37508 1.21627 4.10861 1.60489 0.22428 1.09861 0.40547 31 1.26090 2.79340 0.57110 2.40260 36 G - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 32 0.10257 3.62488 3.31300 3.36886 37 A - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 33 2.97767 2.88064 3.50735 0.14733 38 U - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 34 3.08548 4.01035 0.09618 3.58048 39 G - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 35 0.10257 3.62488 3.31300 3.36886 40 A - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 36 2.97767 2.88064 3.50735 0.14733 41 U - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 37 1.81708 2.18528 1.23886 0.83163 42 u - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 38 0.97327 2.67711 0.79541 2.28279 43 g - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 39 0.72963 2.63652 1.07650 2.24890 44 a - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 40 3.31047 0.12783 3.87791 2.76771 45 C - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 41 3.31047 0.12783 3.87791 2.76771 46 C - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 42 3.31047 0.12783 3.87791 2.76771 47 C - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 43 3.31047 0.12783 3.87791 2.76771 48 C - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 44 0.34326 2.83253 1.89254 2.51341 49 A - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 45 0.97327 2.67711 0.79541 2.28279 50 g - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 46 0.10257 3.62488 3.31300 3.36886 51 A - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 47 1.83525 1.33302 0.85910 1.87600 52 g - - : 1.38629 1.38629 1.38629 1.38629 0.35857 4.10861 1.25564 1.46634 0.26236 1.09861 0.40547 48 2.38802 2.39046 2.89509 0.27272 53 U - - : 1.38629 1.38629 1.38629 1.38629 0.04596 3.79601 3.79601 1.46634 0.26236 2.96214 0.05309 49 2.44934 3.28997 0.19919 2.86474 54 G - - : 1.38629 1.38629 1.38629 1.38629 0.04596 3.79601 3.79601 1.46634 0.26236 2.96214 0.05309 50 2.44934 3.28997 0.19919 2.86474 55 G - - : 1.38629 1.38629 1.38629 1.38629 0.04596 3.79601 3.79601 1.46634 0.26236 0.10916 2.26899 51 3.31047 0.12783 3.87791 2.76771 56 C - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 52 2.19863 1.38586 2.73939 0.55456 57 U - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 53 3.08548 4.01035 0.09618 3.58048 58 G - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 54 0.10257 3.62488 3.31300 3.36886 59 A - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 55 3.08548 4.01035 0.09618 3.58048 60 G - - : 1.38629 1.38629 1.38629 1.38629 0.03341 4.10861 4.10861 1.46634 0.26236 1.09861 0.40547 56 3.31047 0.12783 3.87791 2.76771 61 C - - : 1.38629 1.38629 1.38629 1.38629 0.01685 4.09205 * 1.46634 0.26236 0.00000 * //