INFERNAL1/a [1.1.5 | Sep 2023] NAME sucA ACC RF01070 DESC SucA RNA motif STATES 263 NODES 66 CLEN 83 W 110 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 17:20:25 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01070/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 35 EFFN 2.097778 CKSUM 3013386760 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 41.10 NC 39.10 EFP7GF -9.0268 0.71888 ECMLC 0.70602 -6.88550 1.02081 1600000 318721 0.003765 ECMGC 0.43532 -13.37512 -2.81317 1600000 39708 0.010074 ECMLI 0.55301 -6.34860 3.11790 1600000 225292 0.005326 ECMGI 0.47447 -8.36080 1.24996 1600000 38233 0.010462 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 110 144 -7.015 -7.222 -0.051 -5.636 IL 1 1 2 1 4 8 37 113 147 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 8 37 112 146 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 5 8 36 110 144 -7.148 -0.038 -6.964 -7.176 -8.068 -0.405 -0.651 -0.305 0.847 D 4 2 3 5 5 4 32 109 143 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 7 35 110 144 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 102 c g - - MP 6 5 3 10 6 9 35 109 143 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -0.595 -2.418 -2.487 0.841 -2.145 -3.292 2.284 -2.616 -2.519 0.940 -3.053 -0.760 1.553 -2.639 0.668 -1.598 ML 7 5 3 10 6 6 33 108 142 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 5 32 107 141 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 3 29 105 139 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 6 34 109 143 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 6 34 108 142 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 101 G C - - MP 12 11 6 16 6 7 33 107 141 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.622 -2.614 -3.638 0.802 -4.001 -4.090 0.292 -4.058 -3.692 3.262 -4.068 -0.414 -0.004 -0.826 -1.609 -2.666 ML 13 11 6 16 6 5 32 106 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 5 31 106 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 3 29 104 138 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 6 32 107 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 6 32 107 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 100 C G - - MP 18 17 6 22 4 5 31 105 139 -7.015 -4.430 -0.442 -2.254 -4.690 -4.608 -4.356 -0.828 -3.043 -4.749 3.592 -3.868 -4.410 -0.607 -4.656 -2.557 0.456 -4.749 -0.753 -3.245 ML 19 17 6 22 4 4 31 105 139 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 4 30 104 138 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 3 29 103 137 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 5 31 106 140 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 5 31 105 139 -1.566 -0.713 -4.266 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 24 23 6 26 3 4 30 103 137 -7.747 -0.024 -6.401 0.758 -0.947 -0.117 -0.205 D 25 23 6 26 3 2 28 102 136 -7.610 -0.425 -2.001 IL 26 26 3 26 3 4 30 104 138 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 27 26 3 29 3 3 29 102 136 -8.413 -0.018 -6.731 1.526 -1.734 -1.608 -1.027 D 28 26 3 29 3 2 27 101 135 -5.620 -0.734 -1.403 IL 29 29 3 29 3 3 29 103 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 98 - A - - MR 30 29 3 32 2 2 28 101 135 -8.432 -0.004 1.612 -1.967 -1.766 -1.349 D 31 29 3 32 2 1 27 100 134 -4.432 -0.068 IR 32 32 3 32 2 2 28 102 136 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 8 ] - - - - - - B 33 32 3 130 34 1 27 100 134 [ BEGR 44 ] - - - - - - S 34 33 1 35 5 0 0 49 70 -2.644 -0.284 -6.964 -7.176 -8.068 IL 35 35 2 35 5 1 1 50 71 -1.644 -0.679 -4.974 -6.806 -6.080 0.000 0.000 0.000 0.000 [ MATP 45 ] 62 97 c g - - MP 36 35 2 40 6 2 2 48 69 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -1.385 -0.403 -0.436 1.154 -1.847 -2.719 1.807 -2.207 -1.946 1.267 -2.509 -0.382 1.296 -2.011 -0.038 -1.116 ML 37 35 2 40 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 2 40 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 2 40 6 0 0 44 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 48 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 63 96 g u - - MP 42 41 6 46 6 2 2 46 67 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.317 -2.219 -3.507 1.606 -4.063 -4.546 0.209 -3.626 -3.262 1.477 -3.721 2.706 -0.083 -3.860 -1.696 -1.308 ML 43 41 6 46 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 42 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 46 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 64 95 c g - - MP 48 47 6 52 6 2 2 44 65 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.826 -3.810 -3.656 -0.097 -2.525 -4.171 2.951 -3.267 -3.679 0.108 -4.038 -1.850 1.081 -3.945 1.552 -2.553 ML 49 47 6 52 6 1 1 43 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 44 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 65 94 u g - - MP 54 53 6 58 4 2 2 42 63 -7.015 -2.507 -0.329 -5.636 -3.341 -3.392 -3.298 0.149 -1.275 -3.920 2.076 -3.087 -3.327 0.290 -3.754 -1.572 1.469 -3.535 2.318 -2.278 ML 55 53 6 58 4 1 1 41 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 1 41 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 0 40 61 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 1 43 63 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 1 41 62 -1.909 -0.530 -4.609 0.000 0.000 0.000 0.000 [ MATL 49 ] 66 - a - - - ML 60 59 6 62 3 1 1 40 60 -8.027 -0.075 -4.419 0.571 -0.695 -0.372 0.169 D 61 59 6 62 3 0 0 38 59 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 1 41 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 67 - a - - - ML 63 62 3 65 3 1 1 39 59 -7.973 -0.020 -6.627 0.747 -0.898 -1.053 0.381 D 64 62 3 65 3 0 0 37 58 -6.615 -2.128 -0.394 IL 65 65 3 65 3 1 1 40 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 68 - u - - - ML 66 65 3 68 3 1 1 38 58 -3.057 -0.312 -3.752 0.121 -0.609 -1.115 0.844 D 67 65 3 68 3 0 0 36 57 -5.904 -1.017 -1.031 IL 68 68 3 68 3 1 1 38 58 -2.395 -0.378 -4.633 0.000 0.000 0.000 0.000 [ MATR 52 ] - 92 - A - - MR 69 68 3 71 3 1 1 36 57 -8.266 -0.045 -5.201 1.470 -1.588 -1.444 -0.916 D 70 68 3 71 3 0 0 35 56 -7.271 -1.069 -0.952 IR 71 71 3 71 3 1 1 37 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 53 ] - 91 - a - - MR 72 71 3 74 3 1 1 35 56 -8.340 -0.019 -6.657 0.776 -0.765 -0.053 -0.442 D 73 71 3 74 3 0 0 34 55 -6.908 -0.896 -1.138 IR 74 74 3 74 3 1 1 36 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 54 ] - 90 - a - - MR 75 74 3 77 5 1 1 34 55 -7.148 -0.334 -6.964 -7.176 -2.437 0.482 -1.116 0.420 -0.315 D 76 74 3 77 5 0 0 33 54 -5.352 -0.707 -2.978 -4.409 -2.404 IR 77 77 3 77 5 1 1 35 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 70 89 g c - - MP 78 77 3 82 6 2 2 33 54 -9.002 -8.942 -0.023 -7.718 -7.998 -8.393 -2.894 -2.425 -2.943 1.126 -2.749 -3.707 1.579 -3.106 -3.037 2.276 -3.507 -0.028 1.492 -3.015 -0.315 -1.928 ML 79 77 3 82 6 1 1 32 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 32 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 31 52 -10.370 -9.068 -0.657 -5.547 -5.565 -1.640 IL 82 82 5 82 6 1 1 33 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 33 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 71 88 c g - - MP 84 83 6 88 6 2 2 31 52 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -2.632 -2.650 -2.753 0.994 -1.894 -3.572 2.375 -2.784 -2.763 0.979 -3.298 -0.823 1.733 -2.907 0.138 -0.968 ML 85 83 6 88 6 1 1 30 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 30 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 27 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 31 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 31 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 72 87 u a - - MP 90 89 6 94 6 2 2 29 50 -9.134 -4.175 -0.101 -7.849 -8.129 -8.524 -3.262 -3.168 -3.273 0.507 -2.493 -3.989 2.046 -3.101 -3.277 1.029 -3.747 -1.158 2.491 -3.463 0.234 -2.186 ML 91 89 6 94 6 1 1 28 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 28 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 25 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 29 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 29 49 -2.814 -0.358 -6.325 -4.493 -5.599 0.000 0.000 0.000 0.000 [ MATP 58 ] 73 85 c g - - MP 96 95 6 100 6 2 2 27 48 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.401 -3.289 -3.384 0.741 -2.520 -4.078 2.615 -3.153 -3.378 0.719 -3.834 -1.234 2.056 -3.591 -0.188 -2.267 ML 97 95 6 100 6 1 1 26 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 26 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 23 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 27 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 27 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 74 84 c g - - MP 102 101 6 106 6 2 2 25 46 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.286 -2.870 -3.289 0.783 -2.770 -4.010 2.218 -3.262 -3.345 2.177 -3.796 -0.721 1.384 -3.405 -0.411 -2.204 ML 103 101 6 106 6 1 1 24 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 24 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 21 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 25 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 25 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 75 83 g c - - MP 108 107 6 112 6 2 2 23 44 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.115 -2.646 -3.150 1.254 -2.840 -3.912 1.993 -3.241 -3.227 2.208 -3.695 -0.497 1.246 -3.235 -0.492 -2.096 ML 109 107 6 112 6 1 1 22 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 22 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 20 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 23 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 23 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 76 82 g c - - MP 114 113 6 118 4 2 2 21 42 -7.015 -3.145 -0.219 -5.636 -2.805 -2.398 -2.866 1.052 -2.771 -2.617 1.601 -3.108 -2.987 2.477 -3.456 -0.371 0.986 -2.930 0.089 -1.922 ML 115 113 6 118 4 1 1 21 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 4 1 1 20 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 117 113 6 118 4 0 0 19 40 -4.568 -4.250 -2.265 -0.520 IL 118 118 5 118 4 1 1 22 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 119 119 6 119 3 1 1 22 42 -1.283 -0.860 -4.708 0.000 0.000 0.000 0.000 [ MATL 62 ] 77 - a - - - ML 120 119 6 122 3 1 1 15 33 -8.027 -0.020 -6.681 0.613 -0.528 -0.148 -0.194 D 121 119 6 122 3 0 0 15 33 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 78 - A - - - ML 123 122 3 125 3 1 1 13 31 -8.027 -0.020 -6.681 1.017 -0.485 -0.968 -0.412 D 124 122 3 125 3 0 0 13 32 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 79 - a - - - ML 126 125 3 128 2 1 1 1 1 * 0.000 0.812 -1.022 -0.219 -0.165 D 127 125 3 128 2 0 0 0 0 * 0.000 IL 128 128 3 128 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 129 128 3 -1 0 0 0 0 0 [ BEGL 9 ] - - - - - - S 130 33 1 131 1 0 6 68 102 0.000 [ BIF 10 ] - - - - - - B 131 130 1 132 221 0 6 68 102 [ BEGL 11 ] - - - - - - S 132 131 1 133 4 0 0 43 63 -0.044 -6.868 -6.275 -6.915 [ MATP 12 ] 7 35 U A - - MP 133 132 1 137 6 2 2 43 63 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.202 -4.124 -4.044 -0.414 -2.959 -4.585 1.370 -3.680 -4.062 -0.163 -4.434 -2.110 3.329 -4.328 -0.354 -2.881 ML 134 132 1 137 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 135 132 1 137 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 136 132 1 137 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 137 137 5 137 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 138 138 6 138 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 34 C G - - MP 139 138 6 143 6 2 2 41 61 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -3.927 -3.875 -3.744 -0.102 -2.583 -4.256 3.158 -3.331 -3.761 0.135 -4.116 -1.855 1.486 -4.033 0.111 -2.614 ML 140 138 6 143 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 141 138 6 143 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 142 138 6 143 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 143 143 5 143 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 144 144 6 144 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 33 C G - - MP 145 144 6 149 6 2 2 39 59 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.251 -4.191 -3.988 -0.406 -2.734 -4.433 3.381 -3.520 -4.021 -0.170 -4.324 -2.159 1.146 -4.325 -0.415 -2.859 ML 146 144 6 149 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 147 144 6 149 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 148 144 6 149 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 149 149 5 149 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 150 150 6 150 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 32 G C - - MP 151 150 6 155 6 2 2 37 57 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.868 -3.154 -4.980 0.115 -5.411 -4.743 -0.744 -5.231 -4.410 3.667 -4.738 -0.859 -1.126 -4.551 -2.788 -3.855 ML 152 150 6 155 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 153 150 6 155 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 154 150 6 155 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 155 155 5 155 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 156 156 6 156 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 31 C G - - MP 157 156 6 161 4 2 2 35 55 -7.015 -7.222 -0.051 -5.636 -3.665 -3.656 -3.583 0.039 -1.438 -4.186 3.136 -3.287 -3.596 0.216 -4.003 -1.698 1.209 -3.835 0.308 -2.494 ML 158 156 6 161 4 1 1 36 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 159 156 6 161 4 1 1 36 55 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 160 156 6 161 4 0 0 35 54 -4.568 -4.250 -2.265 -0.520 IL 161 161 5 161 4 1 1 38 57 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 162 162 6 162 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 12 - u - - - ML 163 162 6 165 3 1 1 33 52 -8.027 -0.020 -6.681 -0.311 -0.019 -0.779 0.700 D 164 162 6 165 3 0 0 32 51 -6.174 -1.687 -0.566 IL 165 165 3 165 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 13 - A - - - ML 166 165 3 168 3 1 1 32 51 -8.027 -0.020 -6.681 1.745 -2.499 -2.118 -2.054 D 167 165 3 168 3 0 0 31 50 -6.174 -1.687 -0.566 IL 168 168 3 168 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - A - - - ML 169 168 3 171 3 1 1 31 49 -8.027 -0.020 -6.681 1.612 -1.967 -1.766 -1.349 D 170 168 3 171 3 0 0 30 48 -6.174 -1.687 -0.566 IL 171 171 3 171 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - a - - - ML 172 171 3 174 3 1 1 29 48 -8.413 -0.018 -6.731 0.293 0.133 -0.888 0.186 D 173 171 3 174 3 0 0 28 47 -5.620 -0.734 -1.403 IL 174 174 3 174 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 30 - c - - MR 175 174 3 177 3 1 1 28 47 -8.413 -0.018 -6.731 -0.288 0.990 -1.487 -0.255 D 176 174 3 177 3 0 0 27 46 -6.390 -1.568 -0.620 IR 177 177 3 177 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 29 - U - - MR 178 177 3 180 3 1 1 27 46 -8.413 -0.018 -6.731 -0.500 -0.840 -1.037 1.168 D 179 177 3 180 3 0 0 26 45 -6.390 -1.568 -0.620 IR 180 180 3 180 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 28 - G - - MR 181 180 3 183 3 1 1 26 45 -8.413 -0.018 -6.731 -0.789 -2.278 1.539 -1.688 D 182 180 3 183 3 0 0 25 44 -6.390 -1.568 -0.620 IR 183 183 3 183 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 27 - U - - MR 184 183 3 186 5 1 1 25 44 -7.148 -0.038 -6.964 -7.176 -8.068 -0.859 -0.888 -1.386 1.337 D 185 183 3 186 5 0 0 24 43 -5.352 -0.707 -2.978 -4.409 -2.404 IR 186 186 3 186 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 26 C G - - MP 187 186 3 191 6 2 2 24 43 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.690 -4.608 -4.356 -0.828 -3.043 -4.749 3.592 -3.868 -4.410 -0.607 -4.656 -2.557 0.456 -4.749 -0.753 -3.245 ML 188 186 3 191 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 189 186 3 191 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 190 186 3 191 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 191 191 5 191 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 192 192 6 192 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 17 25 G C - - MP 193 192 6 197 6 2 2 22 41 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.868 -3.154 -4.980 0.115 -5.411 -4.743 -0.744 -5.231 -4.410 3.667 -4.738 -0.859 -1.126 -4.551 -2.788 -3.855 ML 194 192 6 197 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 195 192 6 197 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 196 192 6 197 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 197 197 5 197 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 198 198 6 198 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 18 24 G C - - MP 199 198 6 203 6 2 2 20 39 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.868 -3.154 -4.980 0.115 -5.411 -4.743 -0.744 -5.231 -4.410 3.667 -4.738 -0.859 -1.126 -4.551 -2.788 -3.855 ML 200 198 6 203 6 1 1 20 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 201 198 6 203 6 1 1 20 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 202 198 6 203 6 0 0 18 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 203 203 5 203 6 1 1 20 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 204 204 6 204 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 19 23 u g - - MP 205 204 6 209 4 2 2 18 37 -7.015 -7.222 -0.051 -5.636 -3.753 -3.571 -3.614 0.063 -2.631 -4.193 1.653 -3.304 -3.631 0.794 -4.008 -1.502 0.927 -3.923 2.783 -2.533 ML 206 204 6 209 4 1 1 20 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 207 204 6 209 4 1 1 19 38 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 208 204 6 209 4 0 0 18 37 -4.568 -4.250 -2.265 -0.520 IL 209 209 5 209 4 1 1 21 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 210 210 6 210 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 20 - c - - - ML 211 210 6 213 3 1 1 15 33 -8.027 -0.020 -6.681 0.164 0.321 -0.952 0.155 D 212 210 6 213 3 0 0 15 33 -6.174 -1.687 -0.566 IL 213 213 3 213 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 21 - a - - - ML 214 213 3 216 3 1 1 13 31 -8.027 -0.020 -6.681 0.628 -0.007 -0.926 -0.100 D 215 213 3 216 3 0 0 13 32 -6.174 -1.687 -0.566 IL 216 216 3 216 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 22 - A - - - ML 217 216 3 219 2 1 1 1 1 * 0.000 1.159 -1.501 -0.156 -0.952 D 218 216 3 219 2 0 0 0 0 * 0.000 IL 219 219 3 219 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 32 ] - - - - - - E 220 219 3 -1 0 0 0 0 0 [ BEGR 33 ] - - - - - - S 221 131 1 222 3 0 0 39 73 -8.027 -0.020 -6.681 IL 222 222 2 222 3 1 1 41 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - A - - - ML 223 222 2 225 5 1 1 39 73 -7.148 -0.038 -6.964 -7.176 -8.068 1.133 -1.148 -1.203 -0.118 D 224 222 2 225 5 0 0 38 72 -4.959 -0.803 -4.221 -2.596 -2.508 IL 225 225 3 225 5 1 1 39 73 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 37 59 G C - - MP 226 225 3 230 6 2 2 38 72 -9.134 -9.073 -0.021 -7.849 -8.129 -8.524 -4.868 -3.154 -4.980 0.115 -5.411 -4.743 -0.744 -5.231 -4.410 3.667 -4.738 -0.859 -1.126 -4.551 -2.788 -3.855 ML 227 225 3 230 6 1 1 37 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 228 225 3 230 6 1 1 36 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 229 225 3 230 6 0 0 33 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 230 230 5 230 6 1 1 38 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 231 231 6 231 5 1 1 37 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 38 58 G C - - MP 232 231 6 236 6 2 2 36 70 -9.134 -9.073 -0.044 -7.849 -8.129 -5.772 -4.868 -3.154 -4.980 0.115 -5.411 -4.743 -0.744 -5.231 -4.410 3.667 -4.738 -0.859 -1.126 -4.551 -2.788 -3.855 ML 233 231 6 236 6 1 1 35 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 234 231 6 236 6 1 1 34 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 235 231 6 236 6 0 0 31 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 236 236 5 236 6 1 1 36 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 237 237 6 237 5 1 1 36 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 39 57 U A - - MP 238 237 6 242 6 2 2 34 68 -9.111 -9.050 -0.021 -7.827 -8.106 -8.501 -4.215 -4.041 -4.051 -0.334 -2.987 -4.613 1.342 -3.685 -4.055 -0.084 -4.427 -1.939 3.340 -4.366 -0.663 -2.877 ML 239 237 6 242 6 1 1 33 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 240 237 6 242 6 1 1 32 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 241 237 6 242 6 0 0 30 64 -9.392 -8.090 -3.888 -4.570 -4.587 -0.245 IL 242 242 5 242 6 1 1 34 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 243 243 6 243 5 1 1 34 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 40 56 U A - - MP 244 243 6 248 4 2 2 32 66 -6.957 -2.888 -0.259 -5.578 -2.605 -3.481 -3.636 0.069 -3.026 -4.399 1.190 -3.569 -3.644 0.334 -4.137 -1.512 3.248 -3.827 -0.767 -2.548 ML 245 243 6 248 4 1 1 31 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 246 243 6 248 4 1 1 31 65 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 247 243 6 248 4 0 0 29 63 -4.892 -4.573 -1.446 -0.843 IL 248 248 5 248 4 1 1 33 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 249 249 6 249 3 1 1 34 68 -0.783 -1.348 -5.261 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - u - - - ML 250 249 6 252 3 1 1 16 35 -8.027 -0.020 -6.681 -0.074 -0.549 -0.117 0.531 D 251 249 6 252 3 0 0 16 34 -6.174 -1.687 -0.566 IL 252 252 3 252 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - u - - - ML 253 252 3 255 3 1 1 15 33 -8.027 -0.208 -2.939 0.371 -0.459 -0.896 0.528 D 254 252 3 255 3 0 0 15 33 -6.174 -1.687 -0.566 IL 255 255 3 255 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - u - - - ML 256 255 3 258 3 1 1 13 32 -7.841 -0.022 -6.496 0.099 -0.629 -0.443 0.629 D 257 255 3 258 3 0 0 13 31 -7.289 -2.802 -0.234 IL 258 258 3 258 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - u - - - ML 259 258 3 261 2 1 1 1 1 * 0.000 -0.241 0.067 -0.698 0.576 D 260 258 3 261 2 0 0 0 0 * 0.000 IL 261 261 3 261 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 262 261 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sucA ACC RF01070 DESC SucA RNA motif LENG 83 MAXL 168 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 17:20:25 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF01070/CM NSEQ 35 EFFN 4.199829 CKSUM 3013386760 STATS LOCAL MSV -8.4820 0.71888 STATS LOCAL VITERBI -9.6647 0.71888 STATS LOCAL FORWARD -3.6231 0.71888 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.41758 1.39903 1.25749 1.48503 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 0.00000 * 1 1.90288 1.98363 1.56556 0.68454 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 2 1.78369 0.97227 2.02357 1.13452 2 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 3 2.50432 3.15523 0.25487 2.29634 3 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 4 3.97635 0.11104 3.83133 2.73864 4 C - - ( 1.38629 1.38629 1.38629 1.38629 0.29742 4.25065 1.41465 1.46634 0.26236 1.09861 0.40547 5 0.78340 2.21851 1.43500 1.62830 5 a - - , 1.38629 1.38629 1.38629 1.38629 0.03767 3.99089 3.99089 1.46634 0.26236 0.11093 2.25378 6 0.19726 3.07800 3.02990 2.46920 6 A - - , 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 7 3.85126 2.48978 3.67019 0.13886 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 8 3.08947 0.40557 2.86937 1.46472 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 9 3.40036 0.25849 3.20871 1.87072 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 10 3.06423 3.94058 0.09068 3.88433 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 11 2.92837 0.39744 2.71942 1.56750 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 12 1.75717 1.33774 1.99223 0.84714 12 u - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 13 0.07227 3.95922 3.62079 3.73484 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 14 0.14657 3.31821 3.20320 2.82206 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 15 1.17128 1.19879 2.13851 1.30696 15 a - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 16 3.97805 0.11095 3.83228 2.73896 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 17 3.06681 3.94445 0.09035 3.88957 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 18 3.06545 3.94241 0.09052 3.88681 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 19 3.15268 1.98646 2.31181 0.32711 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 20 1.29233 1.03741 2.20915 1.34244 20 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 21 0.87376 1.31296 2.21361 1.58820 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 22 0.45334 2.90585 1.45573 2.56959 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 23 2.51736 2.42230 0.25549 2.88103 23 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 24 4.05338 0.10924 3.80111 2.75244 24 C - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 25 4.06475 0.10873 3.80678 2.75449 25 C - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 26 3.03135 4.01085 0.09378 3.76600 26 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 27 2.46491 2.32048 2.69312 0.28890 27 U - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 28 2.28161 3.60843 0.18473 3.23258 28 G - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 29 2.00077 2.25229 2.29672 0.41700 29 U - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 30 1.76732 0.49984 2.86993 1.79648 30 C - - - 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 31 1.88063 2.88662 0.32281 2.69372 31 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 32 4.03142 0.11023 3.79005 2.74843 32 C - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 33 2.07211 3.36346 0.22743 3.14920 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 34 1.74475 3.02775 0.33080 2.83803 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 35 0.17237 3.80732 2.22774 3.56310 35 A - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 36 0.46557 2.49492 2.55983 1.54927 36 A - - , 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 37 3.07738 3.96034 0.08900 3.91116 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 38 3.07210 3.95239 0.08967 3.90034 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.07950 4.25065 2.77795 1.46634 0.26236 1.09861 0.40547 39 3.76942 2.52699 3.59407 0.13978 39 U - - < 1.38629 1.38629 1.38629 1.38629 0.03040 4.20155 4.20155 1.46634 0.26236 1.85018 0.17104 40 3.38450 2.76992 3.34830 0.14122 40 U - - < 1.38629 1.38629 1.38629 1.38629 0.03040 4.20155 4.20155 1.46634 0.26236 0.37749 1.15703 41 1.51466 1.84286 1.39861 0.98133 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 42 1.08707 1.76410 2.13248 0.98641 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.20448 4.25064 1.76800 1.46634 0.26236 1.09861 0.40547 43 1.33845 1.94083 1.69386 0.89073 43 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 2.63711 0.07426 44 1.69247 1.25493 1.92521 0.95452 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.31017 1.64513 2.60786 1.44026 0.27032 0.15447 1.94397 45 0.15109 3.53779 2.59671 3.30684 56 A - - > 1.38629 1.38629 1.38629 1.38629 0.03040 4.20155 4.20155 1.46634 0.26236 1.85018 0.17104 46 0.15890 3.79004 2.36167 3.50445 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.03040 4.20155 4.20155 1.46634 0.26236 0.37749 1.15703 47 4.06666 0.10865 3.80773 2.75483 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 48 4.08107 0.10802 3.81487 2.75740 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.29355 1.42656 4.25064 0.68974 0.69656 1.09861 0.40547 49 1.24404 1.28314 1.62858 1.43377 62 a - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 50 1.63237 3.39214 0.34430 2.77764 63 G - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 51 3.23445 0.54585 3.05054 1.09681 64 C - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 52 3.03431 1.31641 2.86695 0.46693 65 U - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 53 0.93763 1.97193 1.65568 1.27907 66 a - - - 1.38629 1.38629 1.38629 1.38629 0.07953 4.25065 2.77741 1.46634 0.26236 1.09861 0.40547 54 0.76987 2.24368 2.35684 1.09022 67 a - - - 1.38629 1.38629 1.38629 1.38629 0.03040 4.20151 4.20151 1.46634 0.26236 1.85055 0.17097 55 1.31684 1.94638 2.38147 0.69954 68 u - - - 1.38629 1.38629 1.38629 1.38629 0.15829 4.20151 2.02935 1.46634 0.26236 0.37732 1.15740 56 1.86806 1.67913 0.90095 1.37493 70 g - - < 1.38629 1.38629 1.38629 1.38629 0.03259 4.13314 4.13314 1.46634 0.26236 0.20527 1.68429 57 1.92042 0.95844 1.91421 1.13163 71 c - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 58 2.45714 1.36079 1.97586 0.65543 72 U - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 59 2.19538 0.82356 2.25836 1.06336 73 c - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 60 2.26212 1.07995 1.06734 1.54959 74 g - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 61 1.76606 1.27067 1.03342 1.64734 75 g - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 62 1.97087 1.58353 0.77196 1.64347 76 g - - < 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 63 0.90833 1.77207 1.45767 1.63968 77 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 64 0.54771 1.73803 2.30414 1.92404 78 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 65 0.73665 2.31231 1.52780 1.58357 79 a - - _ 1.38629 1.38629 1.38629 1.38629 0.17061 1.94777 4.25064 0.76351 0.62741 1.09861 0.40547 66 2.11645 0.82576 1.32671 1.73563 82 c - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 67 1.84970 1.12278 1.16612 1.58100 83 c - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 68 1.73449 1.14002 0.99105 2.02111 84 g - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 69 1.18331 2.43101 0.74813 2.02089 85 g - - > 1.38629 1.38629 1.38629 1.38629 0.21442 1.72184 4.25064 0.15252 1.95576 1.09861 0.40547 70 0.79644 2.11048 1.13712 2.23357 87 a - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 71 1.40296 2.09024 0.83302 1.63097 88 g - - > 1.38629 1.38629 1.38629 1.38629 0.35064 4.25064 1.26761 1.46634 0.26236 1.09861 0.40547 72 1.57518 1.04283 1.48250 1.54411 89 c - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93969 3.93969 1.46634 0.26236 0.09647 2.38636 73 1.03044 2.41211 0.96803 1.75046 90 g - - - 1.38629 1.38629 1.38629 1.38629 0.10246 4.25065 2.48737 1.46634 0.26236 1.09861 0.40547 74 0.76157 2.00621 1.37180 1.93157 91 a - - - 1.38629 1.38629 1.38629 1.38629 0.13131 4.17928 2.22803 1.46634 0.26236 1.15467 0.37857 75 0.22382 2.94027 2.86761 2.39849 92 A - - - 1.38629 1.38629 1.38629 1.38629 0.31302 1.37712 4.10676 0.12573 2.13579 0.17588 1.82462 76 1.68187 3.02975 0.34887 2.81079 94 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 77 2.33047 3.21432 0.20719 3.00176 95 G - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 78 3.39345 2.26545 3.19575 0.19639 96 U - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 79 1.61356 1.51264 0.98307 1.57826 97 g - - > 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 80 0.14657 3.31821 3.20320 2.82206 98 A - - , 1.38629 1.38629 1.38629 1.38629 0.07950 2.77795 4.25065 0.40875 1.09208 1.09861 0.40547 81 3.02067 3.99294 0.09521 3.74632 100 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 82 3.27677 0.21966 2.97779 2.22054 101 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02892 4.25065 4.25065 1.46634 0.26236 1.09861 0.40547 83 1.35422 2.19481 0.71145 1.96941 102 g - - ) 1.38629 1.38629 1.38629 1.38629 0.01457 4.23629 * 1.46634 0.26236 0.00000 * //