INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-278 ACC RF00729 DESC microRNA mir-278 STATES 229 NODES 53 CLEN 75 W 105 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 18:48:46 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00729/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 26 EFFN 4.833740 CKSUM 3077259645 NULL 0.000 0.000 0.000 0.000 GA 55.00 TC 55.20 NC 54.00 EFP7GF -12.3208 0.71901 ECMLC 0.65899 -5.25841 2.82576 1600000 247080 0.004857 ECMGC 0.45572 -15.65792 -4.04579 1600000 79483 0.005033 ECMLI 0.69602 -3.49784 3.81289 1600000 194566 0.006168 ECMGI 0.50279 -10.42392 -0.45062 1600000 60233 0.006641 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 105 143 -7.816 -8.023 -0.232 -2.832 IL 1 1 2 1 4 1 25 108 145 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 107 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 26 105 143 -8.594 -0.013 -7.248 -0.797 -1.111 1.365 -1.375 D 4 2 3 5 3 0 17 102 140 -7.768 -3.281 -0.164 IL 5 5 3 5 3 1 24 106 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 1 26 104 142 -8.951 -0.012 -7.269 -0.345 -0.673 0.778 -0.200 D 7 5 3 8 3 0 17 102 139 -6.776 -1.890 -0.472 IL 8 8 3 8 3 1 23 105 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 84 - c - - MR 9 8 3 11 3 1 25 103 141 -8.951 -0.012 -7.269 -0.870 0.950 -0.530 -0.271 D 10 8 3 11 3 0 16 101 139 -7.823 -3.001 -0.200 IR 11 11 3 11 3 1 23 104 141 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 83 - A - - MR 12 11 3 14 5 1 25 102 140 -7.657 -0.026 -7.472 -7.684 -8.576 1.149 -1.398 -1.519 0.076 D 13 11 3 14 5 0 16 101 138 -6.318 -0.522 -3.944 -5.375 -2.308 IR 14 14 3 14 5 1 21 102 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 82 U A - - MP 15 14 3 19 6 2 25 101 139 -9.481 -9.420 -0.016 -8.197 -8.476 -8.871 -4.436 -4.420 -4.262 -0.599 -3.078 -4.790 1.909 -3.828 -4.264 -0.439 -4.632 -2.386 3.019 -4.555 0.947 -3.112 ML 16 14 3 19 6 1 18 99 137 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 17 99 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 12 96 133 -9.458 -8.156 -3.953 -4.635 -4.652 -0.234 IL 19 19 5 19 6 1 20 101 138 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 20 100 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 81 g c - - MP 21 20 6 25 6 2 23 99 137 -9.481 -9.420 -0.016 -8.197 -8.476 -8.871 -2.811 -2.249 -2.992 1.363 -2.957 -3.610 1.725 -3.198 -2.954 1.790 -3.364 1.420 0.724 -3.029 -0.799 -0.699 ML 22 20 6 25 6 1 17 97 135 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 16 97 135 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 12 94 132 -9.458 -8.156 -3.953 -4.635 -4.652 -0.234 IL 25 25 5 25 6 1 19 99 136 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 19 98 136 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 80 C G - - MP 27 26 6 31 6 2 22 97 135 -9.481 -9.420 -0.016 -8.197 -8.476 -8.871 -4.518 -4.470 -4.326 -0.574 -3.092 -4.849 3.142 -3.850 -4.316 -0.401 -4.680 -2.368 1.709 -4.623 0.747 -3.138 ML 28 26 6 31 6 1 16 96 133 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 15 95 133 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 12 93 130 -9.458 -8.156 -3.953 -4.635 -1.804 -0.728 IL 31 31 5 31 6 1 18 97 134 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 18 96 134 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 79 g u - - MP 33 32 6 37 6 2 20 95 133 -9.481 -9.420 -0.016 -8.197 -8.476 -8.871 -2.990 -1.300 -3.903 1.044 -4.243 -3.325 0.032 0.270 -2.761 0.628 -2.795 2.885 -0.533 -3.546 -1.882 -0.548 ML 34 32 6 37 6 1 16 94 131 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 14 94 131 -7.279 -6.008 -1.916 -5.986 -0.637 -4.199 0.010 -0.405 -0.590 0.654 D 36 32 6 37 6 0 11 91 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 17 95 132 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 17 94 132 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 78 a u - - MP 39 38 6 43 4 2 18 93 131 -7.775 -7.982 -0.030 -6.396 -1.661 -1.776 -1.875 1.654 -1.865 -2.677 1.525 -0.691 -1.913 0.862 -1.233 -0.069 1.159 -1.183 -0.120 -0.015 ML 40 38 6 43 4 1 14 93 130 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 1 12 92 130 -5.140 -4.169 -1.157 -1.097 0.010 -0.405 -0.590 0.654 D 42 38 6 43 4 0 11 91 128 -4.568 -4.250 -2.265 -0.520 IL 43 43 5 43 4 1 16 94 131 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 16 93 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - C - - - ML 45 44 6 47 3 1 17 91 129 -9.134 -0.011 -7.451 -0.215 1.005 -1.894 -0.214 D 46 44 6 47 3 0 10 90 127 -5.620 -0.734 -1.403 IL 47 47 3 47 3 1 14 92 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 77 - U - - MR 48 47 3 50 5 1 17 90 128 -7.832 -0.023 -7.647 -7.859 -8.751 -0.155 -1.506 -1.924 1.314 D 49 47 3 50 5 0 8 89 126 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 1 12 90 128 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 76 C G - - MP 51 50 3 55 6 2 17 89 127 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -4.412 -4.506 -2.106 -1.174 -3.811 -5.097 3.683 -4.498 -4.526 -1.120 -1.130 -2.824 -0.443 -4.681 -1.812 -3.569 ML 52 50 3 55 6 1 10 87 125 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 10 87 125 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 5 84 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 12 89 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 12 88 126 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 75 G C - - MP 57 56 6 61 6 2 16 87 125 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -5.578 -0.840 -5.724 -0.401 -6.669 -5.107 -1.707 -6.182 -4.983 3.747 -5.254 -1.320 -1.989 -4.996 -3.786 -4.635 ML 58 56 6 61 6 1 10 85 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 9 85 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 5 82 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 11 87 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 12 86 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 74 G C - - MP 63 62 6 67 6 2 15 85 123 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -4.444 -3.004 -4.391 1.158 -5.474 -4.910 -0.647 -4.898 -4.425 3.332 -4.769 0.863 -0.900 -4.293 -2.650 -3.290 ML 64 62 6 67 6 1 9 83 121 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 9 83 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 4 80 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 11 85 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 11 84 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 73 A U - - MP 69 68 6 73 6 2 14 83 121 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -4.814 -3.549 -4.837 3.685 -6.462 -7.392 -2.023 -4.885 -4.619 -0.016 -5.255 0.306 -2.138 -5.981 -3.905 -3.577 ML 70 68 6 73 6 1 9 82 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 8 81 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 4 78 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 10 83 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 10 82 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 72 c g - - MP 75 74 6 79 6 2 13 81 119 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -5.174 -5.266 -4.736 -1.445 -3.269 -5.041 2.952 -4.120 -4.789 -1.329 -5.019 -3.359 0.182 -5.151 2.537 -3.606 ML 76 74 6 79 6 1 8 80 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 7 79 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 4 77 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 9 81 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 10 80 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 71 G C - - MP 81 80 6 85 6 2 11 79 117 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -6.281 -3.859 -6.727 -0.911 -7.332 -5.261 -2.319 -6.940 -5.208 3.860 -5.466 -1.652 -2.680 -5.434 -4.474 -5.583 ML 82 80 6 85 6 1 7 78 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 6 78 115 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 3 76 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 8 79 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 8 78 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 70 A U - - MP 87 86 6 91 4 2 9 77 115 -7.816 -8.023 -0.073 -4.597 -4.805 -3.541 -4.833 3.681 -6.453 -7.381 -2.013 -4.882 -4.611 -0.006 -5.247 0.330 -2.129 -5.971 -3.896 -3.570 ML 88 86 6 91 4 1 6 77 114 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 4 76 114 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 3 75 113 -4.568 -4.250 -2.265 -0.520 IL 91 91 5 91 4 1 8 78 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 8 77 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - a - - - ML 93 92 6 95 3 1 8 75 113 -9.093 -0.011 -7.411 0.676 -0.849 -0.914 0.397 D 94 92 6 95 3 0 2 74 112 -5.980 -0.536 -1.763 IL 95 95 3 95 3 1 6 76 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 69 - U - - MR 96 95 3 98 5 1 8 74 112 -7.832 -0.023 -7.647 -7.859 -8.751 -3.021 -2.773 -3.801 1.871 D 97 95 3 98 5 0 0 73 110 -5.352 -0.707 -2.978 -4.409 -2.404 IR 98 98 3 98 5 1 4 74 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 68 a u - - MP 99 98 3 103 6 2 9 73 111 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -1.813 -0.899 -2.323 1.546 -2.332 -0.798 1.133 -1.261 -1.863 1.022 -2.081 1.489 0.820 -2.178 -0.437 -0.735 ML 100 98 3 103 6 1 2 71 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 3 103 6 1 2 71 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 3 103 6 0 0 68 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 3 73 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 4 72 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 67 G C - - MP 105 104 6 109 6 2 8 71 109 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -3.885 -2.722 -3.817 1.440 -4.634 -4.604 -0.038 -4.306 -4.038 3.086 -4.415 -0.343 -0.304 -3.835 -1.993 0.456 ML 106 104 6 109 6 1 2 70 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 2 69 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 66 104 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 3 71 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 3 70 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 66 U A - - MP 111 110 6 115 6 2 6 69 107 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -4.389 -4.399 -4.234 -0.631 -0.599 -4.772 1.870 -3.833 -4.242 -0.491 -4.617 -2.415 3.177 -4.521 -0.768 -3.110 ML 112 110 6 115 6 1 2 68 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 2 67 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 65 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 3 69 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 3 69 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 65 C G - - MP 117 116 6 121 6 2 4 67 105 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -5.137 -5.218 -4.716 -1.385 -3.261 -5.034 3.091 -4.107 -4.765 -1.264 -5.003 -3.289 0.209 -5.124 2.308 -3.581 ML 118 116 6 121 6 1 2 66 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 2 66 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 64 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 2 67 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 2 67 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 64 c g - - MP 123 122 6 127 4 2 2 65 103 -7.816 -8.023 -0.306 -2.452 -3.965 -4.036 -3.904 -0.494 -2.981 -4.507 2.788 -3.666 -3.932 -0.402 -0.487 -2.231 0.574 -4.155 2.174 -2.882 ML 124 122 6 127 4 1 1 65 102 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 64 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 63 101 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 2 66 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 65 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 22 - a - - - ML 129 128 6 131 5 1 2 63 101 -7.595 -0.114 -7.410 -4.004 -8.514 0.429 -0.141 -1.235 0.402 D 130 128 6 131 5 0 0 62 100 -6.287 -0.269 -5.548 -3.923 -3.835 IL 131 131 3 131 5 1 1 64 101 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 63 c g - - MP 132 131 3 136 6 2 3 63 100 -9.460 -9.399 -0.017 -8.176 -8.455 -8.850 -2.356 -2.510 -0.246 0.618 -2.264 -3.334 2.587 -2.711 -2.561 0.581 -1.095 -0.997 1.090 -2.667 0.634 -1.686 ML 133 131 3 136 6 1 1 61 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 3 136 6 1 1 61 99 -7.514 -6.243 -0.914 -6.222 -1.355 -4.435 -0.066 -0.971 0.831 -0.403 D 135 131 3 136 6 0 0 59 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 62 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 62 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 62 a u - - MP 138 137 6 142 4 2 2 61 98 -7.816 -8.023 -0.029 -6.437 -3.749 -2.947 -3.912 2.670 -4.422 -5.206 -0.529 1.046 -3.760 0.645 -4.325 1.943 -0.728 -4.349 -2.277 -2.812 ML 139 137 6 142 4 1 1 60 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 59 97 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 141 137 6 142 4 0 0 58 96 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 61 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 60 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - a - - - ML 144 143 6 146 3 1 1 59 96 -2.107 -0.392 -7.451 0.467 -0.097 -0.376 -0.132 D 145 143 6 146 3 0 0 57 94 -5.620 -0.734 -1.403 IL 146 146 3 146 3 1 1 58 96 -3.121 -0.216 -5.359 0.000 0.000 0.000 0.000 [ MATR 30 ] - 61 - G - - MR 147 146 3 149 5 1 1 57 95 -7.832 -0.023 -7.647 -7.859 -8.751 -3.145 -4.547 1.917 -3.887 D 148 146 3 149 5 0 0 56 93 -5.352 -0.707 -2.978 -4.409 -2.404 IR 149 149 3 149 5 1 1 57 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 27 60 C G - - MP 150 149 3 154 6 2 2 56 94 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -5.406 -5.485 -4.923 -1.615 -3.414 -5.200 3.666 -4.290 -4.987 -1.489 -5.182 -3.538 0.032 -5.363 0.147 -3.788 ML 151 149 3 154 6 1 1 54 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 3 154 6 1 1 54 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 3 154 6 0 0 51 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 56 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 55 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 28 59 G C - - MP 156 155 6 160 6 2 2 54 92 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -5.029 1.458 -5.114 -0.009 -6.121 -5.222 -1.357 -5.480 -4.704 3.414 -5.068 -1.013 -1.618 -4.874 -3.369 -3.968 ML 157 155 6 160 6 1 1 52 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 52 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 49 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 54 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 53 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 29 58 A U - - MP 162 161 6 166 6 2 2 52 90 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -4.480 -3.222 -4.636 3.137 -6.115 -6.921 -1.683 -4.732 -4.301 0.366 -4.929 2.254 -1.788 -5.574 -3.558 -3.307 ML 163 161 6 166 6 1 1 50 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 50 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 47 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 52 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 51 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 30 57 c g - - MP 168 167 6 172 6 2 2 50 88 -9.502 -9.441 -0.016 -8.218 -8.498 -8.893 -3.431 -3.455 -3.486 0.127 -2.775 -4.235 2.854 -3.368 -3.485 0.240 -0.782 -1.569 1.722 -3.677 0.444 -2.449 ML 169 167 6 172 6 1 1 48 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 48 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 45 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 50 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 49 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 31 56 C G - - MP 174 173 6 178 4 2 2 48 86 -2.369 -2.278 -1.340 -2.285 -6.300 -6.296 -1.898 -2.551 -4.536 -6.152 3.863 -5.578 -6.078 -2.417 -6.072 -4.317 -1.255 -6.395 -2.486 -4.934 ML 175 173 6 178 4 1 1 45 83 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 4 1 1 45 82 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 177 173 6 178 4 0 0 43 81 -4.568 -4.250 -2.265 -0.520 IL 178 178 5 178 4 1 1 48 86 -1.440 -2.113 -1.357 -6.655 0.000 0.000 0.000 0.000 IR 179 179 6 179 3 1 1 48 86 -0.708 -2.203 -2.552 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - G - - - ML 180 179 6 182 3 1 1 29 48 -8.146 -0.018 -6.801 -0.592 -1.118 1.096 -0.439 D 181 179 6 182 3 0 0 27 46 -8.947 -2.304 -0.330 IL 182 182 3 182 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - U - - - ML 183 182 3 185 3 1 1 28 47 -8.287 -0.016 -6.941 -0.513 -0.314 -1.159 1.033 D 184 182 3 185 3 0 0 27 45 -8.701 -1.337 -0.733 IL 185 185 3 185 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - G - - - ML 186 185 3 188 3 1 1 27 46 -8.514 -0.014 -7.168 -0.599 -1.479 1.006 -0.039 D 187 185 3 188 3 0 0 26 44 -8.097 -1.112 -0.906 IL 188 188 3 188 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - U - - - ML 189 188 3 191 3 1 1 26 45 -8.660 -0.013 -7.314 -0.669 -0.690 -0.853 1.136 D 190 188 3 191 3 0 0 24 43 -7.406 -2.919 -0.215 IL 191 191 3 191 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - C - - - ML 192 191 3 194 3 1 1 25 44 -8.660 -0.013 -7.314 -0.346 1.023 -1.498 -0.275 D 193 191 3 194 3 0 0 24 43 -7.406 -0.985 -1.033 IL 194 194 3 194 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 40 - a - - - ML 195 194 3 197 3 1 1 24 42 -8.742 -0.012 -7.396 0.187 0.097 -0.221 -0.099 D 196 194 3 197 3 0 0 23 42 -6.732 -0.911 -1.124 IL 197 197 3 197 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 41 - u - - - ML 198 197 3 200 3 1 1 23 41 -8.785 -0.012 -7.439 0.180 -0.646 -0.033 0.323 D 199 197 3 200 3 0 0 22 41 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 42 - U - - - ML 201 200 3 203 3 1 1 21 40 -8.785 -0.012 -7.439 -0.616 -1.051 -0.885 1.216 D 202 200 3 203 3 0 0 21 40 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 43 - u - - - ML 204 203 3 206 3 1 1 20 39 -8.785 -0.012 -7.439 -0.402 -0.055 -1.169 0.877 D 205 203 3 206 3 0 0 20 39 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 44 - u - - - ML 207 206 3 209 3 1 1 19 38 -8.785 -0.012 -7.439 0.295 -0.428 -0.971 0.603 D 208 206 3 209 3 0 0 19 37 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 45 - a - - - ML 210 209 3 212 3 1 1 18 37 -8.785 -0.012 -7.439 0.850 -0.884 -0.666 0.035 D 211 209 3 212 3 0 0 18 36 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 46 - A - - - ML 213 212 3 215 3 1 1 17 35 -8.785 -0.012 -7.439 1.145 -0.698 -1.196 -0.444 D 214 212 3 215 3 0 0 17 35 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 47 - c - - - ML 216 215 3 218 3 1 1 16 34 -8.785 -0.061 -4.686 -0.078 0.919 -1.810 -0.190 D 217 215 3 218 3 0 0 15 34 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 48 - g - - - ML 219 218 3 221 3 1 1 14 33 -8.736 -0.543 -1.684 0.213 -1.298 0.509 0.016 D 220 218 3 221 3 0 0 14 33 -6.797 -2.310 -0.341 IL 221 221 3 221 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 49 - a - - - ML 222 221 3 224 3 1 1 13 31 -8.211 -0.017 -6.865 0.174 -0.005 -0.247 0.046 D 223 221 3 224 3 0 0 11 30 -8.843 -4.356 -0.076 IL 224 224 3 224 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 50 - a - - - ML 225 224 3 227 2 1 1 1 1 * 0.000 0.977 -0.764 -0.350 -0.605 D 226 224 3 227 2 0 0 0 0 * 0.000 IL 227 227 3 227 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 228 227 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-278 ACC RF00729 DESC microRNA mir-278 LENG 75 MAXL 152 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 18:48:46 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00729/CM NSEQ 26 EFFN 7.950439 CKSUM 3077259645 STATS LOCAL MSV -8.1966 0.71901 STATS LOCAL VITERBI -9.2801 0.71901 STATS LOCAL FORWARD -3.6657 0.71901 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.64542 1.41825 1.21287 1.31831 1.38629 1.38629 1.38629 1.38629 0.16634 4.59220 1.94411 1.46634 0.26236 0.00000 * 1 2.17802 2.19103 0.34293 2.72965 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.02365 4.44950 4.44950 1.46634 0.26236 2.78049 0.06401 2 1.76899 1.89566 0.73273 1.61606 2 g - - : 1.38629 1.38629 1.38629 1.38629 0.02365 4.44950 4.44950 1.46634 0.26236 0.36993 1.17372 3 3.51532 1.53821 3.33240 0.32880 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 1.78954 0.18277 4 1.67491 1.47273 0.85953 1.83248 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 1.78954 0.18277 5 3.42642 0.49124 3.21696 1.15343 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 1.78954 0.18277 6 1.99996 2.02700 0.41786 2.59729 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 1.78954 0.18277 7 1.32935 1.39417 1.58123 1.26730 7 u - - < 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 0.40657 1.09640 8 1.59111 0.58551 3.06599 1.64572 8 C - - - 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 9 2.86758 0.25629 2.28829 2.69106 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 10 2.63279 4.40688 0.10235 4.32653 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 11 1.94404 3.41739 0.24168 3.25013 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 12 0.15400 4.53146 2.14959 4.17143 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 13 4.08569 0.67918 3.96726 0.78256 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 14 3.62078 4.64527 0.04733 4.61917 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 15 0.15676 4.51806 2.13249 4.15776 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.05428 4.59220 3.15346 1.46634 0.26236 1.09861 0.40547 16 0.86898 2.08935 2.10881 1.09222 16 a - - - 1.38629 1.38629 1.38629 1.38629 0.02117 4.55908 4.55908 1.46634 0.26236 0.38829 1.13388 17 1.35058 1.59720 1.00721 1.75325 17 g - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 18 1.72872 3.08620 0.48200 1.83719 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 19 3.65131 1.38243 3.46747 0.36834 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 20 4.06263 0.56885 3.93817 0.92347 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 21 3.71289 0.72826 2.47620 0.89457 21 c - - < 1.38629 1.38629 1.38629 1.38629 0.22040 4.59220 1.67307 1.46634 0.26236 1.09861 0.40547 22 1.05678 1.46384 2.41757 1.10279 22 a - - - 1.38629 1.38629 1.38629 1.38629 0.09673 4.39675 2.52722 1.46634 0.26236 0.10252 2.32850 23 1.90705 0.68326 2.10148 1.49504 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.02169 4.53503 4.53503 1.46634 0.26236 0.26880 1.44518 24 0.77203 1.72497 1.08750 3.78580 24 a - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 25 1.04078 1.41069 1.64732 1.55932 25 a - - - 1.38629 1.38629 1.38629 1.38629 0.32300 1.32464 4.59220 0.07453 2.63359 1.09861 0.40547 26 4.11657 0.16410 3.99385 2.14889 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 27 1.35538 4.21671 0.34212 4.06620 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 28 0.51441 4.39436 0.98919 4.02176 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 29 2.92487 0.63259 2.18974 1.19346 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 30 3.45263 0.07323 4.61772 3.53787 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.91921 1.58416 0.92622 0.54749 0.86369 1.09861 0.40547 31 2.04557 2.31982 0.48646 1.84767 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03355 4.10458 4.10458 1.46634 0.26236 1.62724 0.21874 32 1.89023 1.62275 2.31540 0.59261 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02999 4.21495 4.21495 1.46634 0.26236 0.90970 0.51525 33 2.01906 2.71460 0.56916 1.44821 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02519 4.38688 4.38688 1.46634 0.26236 0.70779 0.67871 34 2.03718 1.95503 2.01330 0.52004 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02250 4.49865 4.49865 1.46634 0.26236 2.46947 0.08843 35 1.71495 0.56876 2.62922 1.70560 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02250 4.49865 4.49865 1.46634 0.26236 0.57302 0.82970 36 1.27135 1.25457 1.51787 1.53632 40 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02115 4.55973 4.55973 1.46634 0.26236 0.39303 1.12395 37 1.27356 1.89224 1.37035 1.15387 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 38 1.96730 2.29552 2.03890 0.46317 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 39 1.75934 1.39978 2.29995 0.73204 43 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 40 1.16386 1.71655 2.14574 0.93891 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 41 0.74118 2.09967 1.89366 1.38457 45 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 42 0.51505 1.91271 2.37963 1.81853 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 43 1.47857 0.64381 2.99254 1.62665 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05708 4.59220 3.09339 1.46634 0.26236 1.09861 0.40547 44 1.25301 2.51804 0.94988 1.39856 48 g - - _ 1.38629 1.38629 1.38629 1.38629 0.42546 4.55635 1.09054 1.46634 0.26236 1.86816 0.16772 45 1.28330 1.33626 1.53760 1.40587 49 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03163 4.16252 4.16252 1.46634 0.26236 3.62377 0.02704 46 0.62552 1.97027 1.64387 2.02219 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.65713 0.76337 4.16252 1.15688 0.37756 0.05484 2.93062 47 3.79463 4.77739 0.04259 4.52958 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 48 1.52619 2.88659 0.41619 2.69837 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 49 4.19508 2.95578 4.15776 0.08638 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 50 4.25628 0.09680 4.05900 2.79982 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 51 3.01088 4.15734 0.08903 3.89801 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 52 4.11571 5.14805 0.03245 4.62524 61 G - - - 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 53 3.70792 2.83225 3.70856 0.11420 62 U - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 54 2.14317 2.63096 0.33313 2.36410 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 55 2.79640 3.71686 0.12341 3.48151 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 56 2.95122 4.08373 0.09539 3.82283 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 57 0.33542 3.63032 1.48905 3.41527 66 A - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 58 3.18132 0.53338 2.89284 1.15065 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 59 2.06837 1.58887 1.73651 0.70660 68 u - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 60 4.10030 3.85802 4.65146 0.04838 69 U - - - 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 61 4.32108 3.12871 4.28290 0.07350 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 62 4.70188 0.05855 4.53375 3.29547 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 63 2.96185 4.11009 0.09378 3.84484 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 64 4.34375 3.13890 4.29947 0.07246 73 U - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 65 3.49749 0.40634 3.22900 1.33162 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 66 4.48780 0.07306 4.28004 3.09300 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 67 2.96485 3.70772 0.11331 3.47289 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 68 1.52912 2.82346 3.14714 0.38434 77 U - - - 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 69 1.75209 1.85769 1.29890 0.92200 78 u - - > 1.38629 1.38629 1.38629 1.38629 0.02047 4.59220 4.59220 1.46634 0.26236 1.09861 0.40547 70 3.65568 2.66285 3.37217 0.13916 79 U - - > 1.38629 1.38629 1.38629 1.38629 0.05184 4.59220 3.20923 1.46634 0.26236 1.09861 0.40547 71 1.56779 3.38730 0.33310 3.19425 80 G - - > 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 1.78954 0.18277 72 2.29468 1.51210 1.37615 0.85282 81 u - - > 1.38629 1.38629 1.38629 1.38629 0.02111 4.56148 4.56148 1.46634 0.26236 1.78954 0.18277 73 0.52146 3.51449 1.07865 3.30962 82 A - - > 1.38629 1.38629 1.38629 1.38629 0.13562 4.56148 2.15091 1.46634 0.26236 1.78954 0.18277 74 0.49889 2.66651 2.76100 1.34680 83 A - - : 1.38629 1.38629 1.38629 1.38629 0.02365 4.44950 4.44950 1.46634 0.26236 2.78049 0.06401 75 2.31670 0.59847 1.75402 1.72220 84 C - - : 1.38629 1.38629 1.38629 1.38629 0.01189 4.43775 * 1.46634 0.26236 0.00000 * //