INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD75 ACC RF00612 DESC Small nucleolar RNA SNORD75 STATES 190 NODES 60 CLEN 62 W 143 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 21:45:47 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00612/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 3.598633 CKSUM 771065778 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.00 NC 49.90 EFP7GF -11.0195 0.71893 ECMLC 0.73906 -4.56404 3.03361 1600000 329462 0.003642 ECMGC 0.41604 -18.09761 -4.26764 1600000 126162 0.003171 ECMLI 0.82501 -1.70438 4.77553 1600000 251714 0.004767 ECMGI 0.45047 -13.58174 -1.34666 1600000 99010 0.004040 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 143 244 -9.347 -9.287 -0.018 -8.063 -8.343 -8.738 IL 1 1 2 1 6 1 19 144 246 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 20 144 246 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 74 a u - - MP 3 2 3 7 6 2 23 143 245 -9.347 -9.287 -0.018 -8.063 -8.343 -8.738 -3.497 -3.084 -3.547 2.550 -3.146 -4.428 1.107 -3.530 -3.528 0.851 -4.028 -0.869 2.054 -3.798 -0.867 -2.475 ML 4 2 3 7 6 1 17 141 243 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 16 140 242 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 12 137 238 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 19 142 244 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 19 142 244 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 73 G C - - MP 9 8 6 13 6 2 21 141 243 -9.347 -9.287 -0.018 -8.063 -8.343 -8.738 -4.298 -2.987 -4.298 0.404 -4.842 -4.528 -0.349 -4.756 -4.237 3.402 -4.566 -0.735 -0.655 0.423 -2.301 -3.289 ML 10 8 6 13 6 1 16 139 241 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 15 139 240 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 11 135 237 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 18 140 242 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 18 140 242 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 72 C G - - MP 15 14 6 19 6 2 20 139 241 -9.347 -9.287 -0.018 -8.063 -8.343 -8.738 -4.593 -4.617 -4.286 -0.799 -2.948 -4.691 3.237 -3.754 -4.315 -0.645 -4.609 -2.635 0.607 -4.641 1.610 -3.146 ML 16 14 6 19 6 1 15 137 239 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 14 137 238 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 11 134 236 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 17 138 240 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 17 138 240 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 71 C G - - MP 21 20 6 25 4 2 18 137 239 -7.508 -7.715 -0.036 -6.129 -4.593 -4.617 -4.286 -0.799 -2.948 -4.691 3.237 -3.754 -4.315 -0.645 -4.609 -2.635 0.607 -4.641 1.610 -3.146 ML 22 20 6 25 4 1 14 136 238 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 12 135 237 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 11 133 235 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 16 137 239 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 16 136 238 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - u - - - ML 27 26 6 29 3 1 17 135 237 -8.491 -0.014 -7.145 -1.179 0.519 -2.000 0.907 D 28 26 6 29 3 0 10 132 234 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 15 135 237 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - u - - - ML 30 29 3 32 3 1 16 134 236 -8.491 -0.014 -7.145 0.409 -1.000 -0.433 0.517 D 31 29 3 32 3 0 9 131 233 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 14 134 236 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 15 133 235 -8.491 -0.014 -7.145 -0.069 -1.236 -1.626 1.200 D 34 32 3 35 3 0 8 130 232 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 13 133 235 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 14 132 234 -8.491 -0.014 -7.145 -0.985 -1.766 1.241 -0.256 D 37 35 3 38 3 0 8 128 230 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 13 132 234 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 14 131 233 -8.491 -0.014 -7.145 1.306 -2.002 -0.116 -1.496 D 40 38 3 41 3 0 8 127 228 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 12 131 233 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 13 130 232 -8.491 -0.014 -7.145 -0.867 -1.260 -0.392 1.184 D 43 41 3 44 3 0 7 123 225 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 11 130 232 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 45 44 3 47 3 1 12 129 231 -2.019 -0.422 -7.145 0.041 -2.213 1.286 -1.661 D 46 44 3 47 3 0 6 112 214 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 13 136 238 -0.261 -2.653 -7.271 0.000 0.000 0.000 0.000 [ MATL 12 ] 22 - g - - - ML 48 47 3 50 3 1 12 65 87 -8.491 -0.014 -7.145 0.177 -0.664 0.707 -0.721 D 49 47 3 50 3 0 6 63 85 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 10 66 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 23 - U - - - ML 51 50 3 53 3 1 11 64 86 -8.491 -0.014 -7.145 -0.069 -1.236 -1.626 1.200 D 52 50 3 53 3 0 5 62 84 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 9 65 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 24 - A - - - ML 54 53 3 56 3 1 10 63 85 -8.491 -0.014 -7.145 1.409 -1.640 -1.693 -0.486 D 55 53 3 56 3 0 4 61 83 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 9 64 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 25 - U - - - ML 57 56 3 59 3 1 10 62 84 -8.491 -0.014 -7.145 -0.867 -1.260 -0.392 1.184 D 58 56 3 59 3 0 4 60 82 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 8 63 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 26 - A - - - ML 60 59 3 62 3 1 9 61 83 -8.491 -0.014 -7.145 1.442 -2.104 -0.459 -1.632 D 61 59 3 62 3 0 3 59 81 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 8 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 27 - A - - - ML 63 62 3 65 3 1 9 60 82 -8.491 -0.014 -7.145 1.306 -2.002 -0.116 -1.496 D 64 62 3 65 3 0 2 58 80 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 28 - G - - - ML 66 65 3 68 3 1 8 59 81 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 67 65 3 68 3 0 2 57 79 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 6 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 29 - A - - - ML 69 68 3 71 3 1 7 58 80 -8.491 -0.014 -7.145 1.203 -1.393 -1.495 -0.056 D 70 68 3 71 3 0 1 56 78 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 6 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 30 - G - - - ML 72 71 3 74 3 1 7 57 78 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 73 71 3 74 3 0 1 55 77 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 5 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 31 - U - - - ML 75 74 3 77 3 1 6 56 77 -8.491 -0.014 -7.145 -0.069 -1.236 -1.626 1.200 D 76 74 3 77 3 0 0 54 76 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 4 57 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 32 - A - - - ML 78 77 3 80 3 1 6 55 76 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 79 77 3 80 3 0 0 53 75 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 4 56 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 33 - G - - - ML 81 80 3 83 3 1 5 54 75 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 82 80 3 83 3 0 0 52 74 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 3 55 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 34 - U - - - ML 84 83 3 86 3 1 5 53 74 -8.491 -0.014 -7.145 -2.487 -2.317 -3.256 1.814 D 85 83 3 86 3 0 0 51 73 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 3 54 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 35 - G - - - ML 87 86 3 89 3 1 4 52 73 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 88 86 3 89 3 0 0 50 72 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 2 53 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 36 - G - - - ML 90 89 3 92 3 1 4 51 72 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 91 89 3 92 3 0 0 49 71 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 2 52 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 37 - A - - - ML 93 92 3 95 3 1 3 50 71 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 94 92 3 95 3 0 0 48 70 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 51 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 38 - C - - - ML 96 95 3 98 3 1 3 49 70 -8.491 -0.014 -7.145 -3.007 1.842 -3.812 -2.187 D 97 95 3 98 3 0 0 47 69 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 50 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 39 - A - - - ML 99 98 3 101 3 1 2 48 69 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 100 98 3 101 3 0 0 46 68 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 49 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 40 - G - - - ML 102 101 3 104 3 1 2 47 68 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 103 101 3 104 3 0 0 45 67 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 48 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 41 - A - - - ML 105 104 3 107 3 1 2 46 67 -8.491 -0.014 -7.145 1.450 -2.112 -0.482 -1.642 D 106 104 3 107 3 0 0 44 66 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 47 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 42 - A - - - ML 108 107 3 110 3 1 1 44 66 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 109 107 3 110 3 0 0 43 65 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 46 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 43 - G - - - ML 111 110 3 113 3 1 1 43 65 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 112 110 3 113 3 0 0 42 64 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 45 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 44 - g - - - ML 114 113 3 116 3 1 1 42 64 -8.491 -0.014 -7.145 -0.779 -1.467 0.929 0.203 D 115 113 3 116 3 0 0 41 63 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 44 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 45 - G - - - ML 117 116 3 119 3 1 1 41 63 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 118 116 3 119 3 0 0 40 62 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 43 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 46 - A - - - ML 120 119 3 122 3 1 1 40 62 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 121 119 3 122 3 0 0 39 61 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 42 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 47 - U - - - ML 123 122 3 125 3 1 1 39 61 -8.491 -0.014 -7.145 -2.487 -2.317 -3.256 1.814 D 124 122 3 125 3 0 0 38 60 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 41 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 48 - U - - - ML 126 125 3 128 3 1 1 38 60 -8.491 -0.014 -7.145 -0.867 -1.260 -0.392 1.184 D 127 125 3 128 3 0 0 37 58 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 40 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 49 - U - - - ML 129 128 3 131 3 1 1 37 59 -8.491 -0.014 -7.145 -2.487 -2.317 -3.256 1.814 D 130 128 3 131 3 0 0 36 57 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 39 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 50 - C - - - ML 132 131 3 134 3 1 1 36 58 -8.491 -0.014 -7.145 -3.007 1.842 -3.812 -2.187 D 133 131 3 134 3 0 0 35 56 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 38 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - U - - - ML 135 134 3 137 3 1 1 35 57 -8.491 -0.014 -7.145 -2.487 -2.317 -3.256 1.814 D 136 134 3 137 3 0 0 34 55 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 37 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - G - - - ML 138 137 3 140 3 1 1 34 56 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 139 137 3 140 3 0 0 33 54 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 36 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - A - - - ML 141 140 3 143 3 1 1 33 55 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 142 140 3 143 3 0 0 32 53 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 35 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - a - - - ML 144 143 3 146 3 1 1 32 54 -8.491 -0.014 -7.145 0.918 -1.200 -0.405 -0.121 D 145 143 3 146 3 0 0 31 52 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 34 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - A - - - ML 147 146 3 149 3 1 1 31 53 -8.491 -0.014 -7.145 1.872 -3.426 -2.960 -3.077 D 148 146 3 149 3 0 0 30 51 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 33 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - a - - - ML 150 149 3 152 3 1 1 30 52 -8.491 -0.014 -7.145 0.788 -1.160 -1.339 0.517 D 151 149 3 152 3 0 0 29 50 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 32 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - u - - - ML 153 152 3 155 3 1 1 29 51 -8.491 -0.014 -7.145 -0.172 -0.317 -1.436 0.956 D 154 152 3 155 3 0 0 28 49 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 31 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - c - - - ML 156 155 3 158 3 1 1 28 50 -8.491 -0.513 -1.755 -0.207 0.806 -1.585 0.072 D 157 155 3 158 3 0 0 27 48 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 30 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 59 - u - - - ML 159 158 3 161 3 1 1 28 49 -7.998 -0.020 -6.652 0.206 -0.856 -1.162 0.885 D 160 158 3 161 3 0 0 24 45 -8.453 -3.966 -0.100 IL 161 161 3 161 3 1 1 29 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 60 - u - - - ML 162 161 3 164 3 1 1 27 48 -2.519 -0.294 -6.652 -0.766 0.096 -1.528 0.997 D 163 161 3 164 3 0 0 21 42 -8.453 -0.221 -2.844 IL 164 164 3 164 3 1 1 28 49 -1.227 -0.885 -4.998 0.000 0.000 0.000 0.000 [ MATL 51 ] 63 - U - - - ML 165 164 3 167 3 1 1 21 39 -8.491 -0.014 -7.145 -2.487 -2.317 -3.256 1.814 D 166 164 3 167 3 0 0 20 39 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 64 - A - - - ML 168 167 3 170 3 1 1 20 38 -8.491 -0.014 -7.145 1.376 -1.591 -1.654 -0.405 D 169 167 3 170 3 0 0 19 38 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 65 - u - - - ML 171 170 3 173 3 1 1 18 37 -8.491 -0.014 -7.145 -0.195 -0.310 -1.447 0.966 D 172 170 3 173 3 0 0 18 37 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 66 - U - - - ML 174 173 3 176 3 1 1 17 36 -8.491 -0.014 -7.145 -1.319 -0.112 -2.099 1.287 D 175 173 3 176 3 0 0 17 35 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 67 - C - - - ML 177 176 3 179 3 1 1 16 34 -8.491 -0.014 -7.145 -3.007 1.842 -3.812 -2.187 D 178 176 3 179 3 0 0 16 34 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 68 - U - - - ML 180 179 3 182 3 1 1 14 33 -8.491 -0.014 -7.145 -2.487 -2.317 -3.256 1.814 D 181 179 3 182 3 0 0 15 33 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 69 - G - - - ML 183 182 3 185 3 1 1 13 31 -8.491 -0.014 -7.145 -2.640 -3.994 1.880 -3.367 D 184 182 3 185 3 0 0 13 32 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 70 - A - - - ML 186 185 3 188 2 1 1 1 1 * 0.000 1.872 -3.426 -2.960 -3.077 D 187 185 3 188 2 0 0 0 0 * 0.000 IL 188 188 3 188 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 59 ] - - - - - - E 189 188 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD75 ACC RF00612 DESC Small nucleolar RNA SNORD75 LENG 62 MAXL 198 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 21:45:47 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00612/CM NSEQ 5 EFFN 4.008789 CKSUM 771065778 STATS LOCAL MSV -7.2529 0.71893 STATS LOCAL VITERBI -8.6460 0.71893 STATS LOCAL FORWARD -3.9471 0.71893 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.23984 1.83740 1.26895 1.30855 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 0.00000 * 1 0.90750 1.97114 1.94176 1.15926 1 a - - < 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 2 2.41229 2.99900 0.33099 1.94951 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 3 3.19264 0.48527 2.99300 1.22667 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 4 3.18766 0.48577 2.99055 1.22673 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 5 2.27830 1.00669 2.85409 0.74548 5 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 6 1.09737 2.11122 1.68814 1.02082 6 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 7 1.44343 2.30244 2.57596 0.53139 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 8 2.14121 2.68917 0.49682 1.57946 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 9 0.46149 2.86431 1.45908 2.52342 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 10 2.05228 2.32000 1.65828 0.53988 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 11 1.36557 3.00603 0.47283 2.63054 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.33387 1.31014 4.26370 2.23342 0.11335 1.09861 0.40547 12 1.27208 1.85286 0.87030 1.93698 22 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 13 1.44343 2.30244 2.57596 0.53139 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 14 0.38856 2.58727 2.63023 1.74479 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 15 2.05228 2.32000 1.65828 0.53988 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 16 0.36791 2.93506 1.70447 2.61973 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 17 0.46149 2.86431 1.45908 2.52342 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 18 3.34576 4.29689 0.07258 3.85550 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 19 0.53165 2.40684 2.48068 1.43306 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 20 3.34576 4.29689 0.07258 3.85550 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 21 1.44343 2.30244 2.57596 0.53139 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 22 0.07691 3.89936 3.56528 3.66982 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 23 3.34576 4.29689 0.07258 3.85550 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 24 3.24485 3.10615 3.78090 0.11266 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 25 3.34576 4.29689 0.07258 3.85550 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 26 3.34576 4.29689 0.07258 3.85550 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 27 0.07691 3.89936 3.56528 3.66982 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 28 3.62886 0.09417 4.17407 3.03782 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 29 0.07691 3.89936 3.56528 3.66982 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 30 3.34576 4.29689 0.07258 3.85550 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 31 0.36232 2.94069 1.72133 2.62712 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 32 0.07691 3.89936 3.56528 3.66982 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 33 3.34576 4.29689 0.07258 3.85550 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 34 1.98517 2.46726 0.71252 1.24681 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 35 3.34576 4.29689 0.07258 3.85550 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 36 0.07691 3.89936 3.56528 3.66982 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 37 3.24485 3.10615 3.78090 0.11266 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 38 2.05228 2.32000 1.65828 0.53988 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 39 3.24485 3.10615 3.78090 0.11266 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 40 3.62886 0.09417 4.17407 3.03782 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 41 3.24485 3.10615 3.78090 0.11266 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 42 3.34576 4.29689 0.07258 3.85550 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 43 0.07691 3.89936 3.56528 3.66982 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 44 0.73537 2.25611 1.67086 1.47916 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 45 0.07691 3.89936 3.56528 3.66982 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 46 0.82464 2.23678 2.36040 1.02048 56 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 47 1.51646 1.60941 2.42345 0.70950 57 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 48 1.54617 0.80146 2.54181 1.34884 58 c - - _ 1.38629 1.38629 1.38629 1.38629 0.40241 4.26370 1.14815 1.46634 0.26236 1.09861 0.40547 49 1.24482 2.01235 2.22678 0.75405 59 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04122 3.90251 3.90251 1.46634 0.26236 3.20054 0.04159 50 1.96705 1.31020 2.49917 0.67686 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.25187 1.59719 3.90251 0.76333 0.62756 0.08499 2.50739 51 3.24485 3.10615 3.78090 0.11266 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 52 0.41152 2.55179 2.60078 1.68632 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 53 1.53325 1.60457 2.43150 0.70262 65 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 54 2.38380 1.46284 2.92716 0.47373 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 55 3.62886 0.09417 4.17407 3.03782 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 56 3.24485 3.10615 3.78090 0.11266 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 57 3.34576 4.29689 0.07258 3.85550 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 58 0.07691 3.89936 3.56528 3.66982 70 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 59 2.28812 3.15118 0.21929 2.94410 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 60 2.28995 3.15409 0.21868 2.94751 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 61 3.13643 0.25068 2.82045 2.13104 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.02854 4.26370 4.26370 1.46634 0.26236 1.09861 0.40547 62 1.25726 2.15286 1.80024 0.83435 74 u - - > 1.38629 1.38629 1.38629 1.38629 0.01437 4.24953 * 1.46634 0.26236 0.00000 * //