INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD64 ACC RF00570 DESC Small Nucleolar RNA SNORD64 STATES 205 NODES 54 CLEN 67 W 84 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 11:45:26 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00570/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 17 EFFN 3.299561 CKSUM 2950120438 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 41.70 NC 37.80 EFP7GF -8.4092 0.71900 ECMLC 0.66359 -4.71698 3.88413 1600000 361378 0.003321 ECMGC 0.41012 -13.08726 0.81846 1600000 119904 0.003336 ECMLI 0.62819 -3.13581 5.56245 1600000 283298 0.004236 ECMGI 0.45637 -7.97043 3.68451 1600000 81670 0.004898 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 84 105 -9.307 -9.246 -0.038 -8.023 -8.303 -5.961 IL 1 1 2 1 6 1 20 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 20 86 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 74 G C - - MP 3 2 3 7 6 2 23 84 105 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -3.829 -2.634 -3.775 0.860 -4.473 -4.254 0.058 -4.314 -3.944 3.251 -4.272 0.508 -0.210 -1.508 -1.884 -2.773 ML 4 2 3 7 6 1 18 83 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 17 83 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 12 80 101 -9.388 -8.087 -3.884 -4.566 -4.583 -0.246 IL 7 7 5 7 6 1 19 84 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 20 84 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 73 G C - - MP 9 8 6 13 6 2 22 82 103 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.159 -1.168 -4.124 0.686 -4.983 -4.528 -0.320 -4.637 -4.153 3.364 -4.486 0.551 -0.581 -3.960 -2.294 -3.071 ML 10 8 6 13 6 1 17 81 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 16 81 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 12 78 99 -9.388 -8.087 -3.884 -4.566 -4.583 -0.246 IL 13 13 5 13 6 1 19 82 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 19 82 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 72 A U - - MP 15 14 6 19 6 2 20 80 101 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -3.832 -3.131 -3.822 3.118 -3.552 -4.783 1.332 -3.791 -3.789 0.888 -4.268 -0.754 0.200 -4.180 -1.228 -2.705 ML 16 14 6 19 6 1 16 79 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 15 79 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 12 77 98 -9.388 -8.087 -3.884 -4.566 -1.992 -0.659 IL 19 19 5 19 6 1 17 80 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 17 80 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 71 u g - - MP 21 20 6 25 6 2 18 78 99 -9.287 -9.227 -0.049 -8.003 -5.383 -8.678 -2.962 -3.010 -3.037 0.954 -2.483 -3.787 1.787 -1.023 -3.067 0.522 -3.566 -1.253 1.088 -3.222 2.312 -2.090 ML 22 20 6 25 6 1 15 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 13 77 98 -7.228 -5.957 -1.865 -5.935 -0.666 -4.148 0.184 -0.690 0.443 -0.178 D 24 20 6 25 6 0 11 75 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 16 78 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 16 78 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 70 u a - - MP 27 26 6 31 4 2 17 76 97 -7.311 -7.518 -0.041 -5.932 -2.835 -2.930 -2.929 0.361 -2.453 -0.585 1.502 -2.985 -2.972 0.463 -3.479 -1.279 2.774 -3.104 0.375 -2.021 ML 28 26 6 31 4 1 14 77 98 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 12 76 97 -5.415 -4.444 -2.311 -0.456 1.072 -0.943 -0.689 -0.401 D 30 26 6 31 4 0 11 75 96 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 16 78 99 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 15 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - u - - - ML 33 32 6 35 3 1 15 74 95 -8.305 -0.016 -6.959 -0.073 -0.404 -0.850 0.798 D 34 32 6 35 3 0 10 73 94 -7.086 -1.164 -0.872 IL 35 35 3 35 3 1 14 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 36 35 3 38 3 1 14 73 94 -8.368 -0.016 -7.022 1.364 -1.018 -1.164 -1.043 D 37 35 3 38 3 0 9 71 92 -6.610 -2.123 -0.396 IL 38 38 3 38 3 1 14 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 39 38 3 41 3 1 13 72 93 -8.368 -0.016 -7.022 -2.255 -2.122 -3.018 1.781 D 40 38 3 41 3 0 8 70 91 -6.610 -2.123 -0.396 IL 41 41 3 41 3 1 13 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 42 41 3 44 3 1 13 71 92 -8.368 -0.122 -3.675 -0.824 -2.624 1.601 -2.066 D 43 41 3 44 3 0 8 69 90 -6.610 -2.123 -0.396 IL 44 44 3 44 3 1 13 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 45 44 3 47 3 1 13 70 91 -8.263 -0.017 -6.917 1.654 -2.287 -1.424 -1.862 D 46 44 3 47 3 0 8 68 89 -7.322 -2.835 -0.228 IL 47 47 3 47 3 1 12 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 48 47 3 50 3 1 12 69 90 -8.635 -0.015 -6.953 -2.052 -1.952 -2.809 1.747 D 49 47 3 50 3 0 7 68 88 -6.419 -1.093 -0.945 IL 50 50 3 50 3 1 11 70 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 69 - A - - MR 51 50 3 53 3 1 11 68 89 -8.677 -0.015 -6.995 1.833 -3.065 -2.629 -2.678 D 52 50 3 53 3 0 6 66 87 -7.179 -2.357 -0.326 IR 53 53 3 53 3 1 11 69 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 68 - G - - MR 54 53 3 56 3 1 10 67 88 -8.677 -0.015 -6.995 -1.135 -2.787 1.671 -2.218 D 55 53 3 56 3 0 6 66 87 -7.179 -0.698 -1.409 IR 56 56 3 56 3 1 9 68 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 67 - U - - MR 57 56 3 59 5 1 10 66 87 -7.489 -0.067 -7.304 -5.023 -8.408 -2.333 -2.187 -3.098 1.793 D 58 56 3 59 5 0 4 65 86 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 8 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 66 G C - - MP 60 59 3 64 6 2 10 65 86 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.857 -3.165 -4.924 0.175 -5.814 -4.870 -1.005 -5.334 -4.517 3.615 -4.845 0.192 -1.284 -4.559 -3.043 -3.809 ML 61 59 3 64 6 1 6 64 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 5 64 84 -7.228 -5.957 -1.865 -5.935 -0.666 -4.148 0.076 0.247 -0.610 0.143 D 63 59 3 64 6 0 1 61 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 7 65 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 7 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 65 A U - - MP 66 65 6 70 6 2 8 63 84 -9.287 -9.227 -0.019 -8.003 -8.283 -8.678 -4.566 -3.425 -4.498 3.668 -5.267 -6.430 -0.913 -4.485 -4.393 0.236 -4.977 -0.797 -1.324 -5.464 -2.850 -3.310 ML 67 65 6 70 6 1 5 62 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 3 62 83 -7.228 -5.957 -1.865 -5.935 -0.666 -4.148 0.060 -0.388 -0.534 0.588 D 69 65 6 70 6 0 1 60 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 6 63 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 6 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 64 G C - - MP 72 71 6 76 4 2 6 61 82 -7.379 -7.586 -0.109 -4.027 -3.346 -2.463 -3.346 0.989 -3.826 -3.956 0.368 -3.840 -1.861 3.128 -3.924 0.144 0.122 -1.651 -1.472 -2.406 ML 73 71 6 76 4 1 4 61 82 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 2 61 82 -5.083 -4.112 -1.979 -0.602 0.076 0.247 -0.610 0.143 D 75 71 6 76 4 0 1 60 81 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 6 63 84 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 5 62 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - C - - - ML 78 77 6 80 3 1 6 59 80 -8.305 -0.016 -6.959 -0.548 1.181 -1.828 -0.382 D 79 77 6 80 3 0 0 57 78 -7.086 -2.599 -0.273 IL 80 80 3 80 3 1 5 61 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - U - - - ML 81 80 3 83 3 1 5 58 79 -8.305 -0.093 -4.073 -2.133 -2.019 -2.892 1.762 D 82 80 3 83 3 0 0 56 77 -7.086 -2.599 -0.273 IL 83 83 3 83 3 1 5 60 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - a - - - ML 84 83 3 86 3 1 5 57 78 -8.228 -0.017 -6.883 0.444 -0.614 0.127 -0.161 D 85 83 3 86 3 0 0 55 76 -7.486 -2.999 -0.202 IL 86 86 3 86 3 1 4 59 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 18 - U - - - ML 87 86 3 89 3 1 4 56 77 -8.228 -0.017 -6.883 -0.550 -1.192 -1.710 1.364 D 88 86 3 89 3 0 0 55 75 -7.486 -0.469 -1.878 IL 89 89 3 89 3 1 3 58 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 19 - G - - - ML 90 89 3 92 3 1 3 55 76 -8.774 -0.014 -7.092 -1.450 -3.108 1.743 -2.541 D 91 89 3 92 3 0 0 54 74 -5.620 -0.734 -1.403 IL 92 92 3 92 3 1 2 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 63 - A - - MR 93 92 3 95 3 1 3 54 75 -8.774 -0.014 -7.092 1.471 -1.744 -1.200 -1.019 D 94 92 3 95 3 0 0 52 73 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 62 - U - - MR 96 95 3 98 3 1 2 53 74 -8.774 -0.014 -7.092 -0.491 -1.309 -1.814 1.379 D 97 95 3 98 3 0 0 51 72 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 61 - u - - MR 99 98 3 101 5 1 2 52 73 -7.489 -0.030 -7.304 -7.516 -8.408 -0.691 -1.161 -0.067 0.984 D 100 98 3 101 5 0 0 51 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 101 101 3 101 5 1 1 52 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 60 U A - - MP 102 101 3 106 6 2 3 51 72 -9.307 -9.246 -0.018 -8.023 -8.303 -8.698 -4.609 -4.632 -4.479 -0.960 -1.270 -5.030 0.889 -4.135 -4.493 -0.820 -4.883 -2.715 3.536 -4.751 -1.098 -3.282 ML 103 101 3 106 6 1 1 50 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 48 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 50 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 59 c g - - MP 108 107 6 112 4 2 2 49 70 -7.422 -4.427 -0.217 -3.513 -1.721 -1.902 -1.913 1.030 -1.854 -2.755 1.527 -2.229 -1.208 0.911 -1.400 -0.528 1.344 -2.053 1.345 -0.161 ML 109 107 6 112 4 1 1 49 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 49 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 48 68 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 50 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 50 70 -1.342 -0.836 -4.462 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - U - - - ML 114 113 6 116 3 1 1 46 66 -8.307 -0.016 -6.961 -1.186 -1.337 -1.456 1.485 D 115 113 6 116 3 0 0 44 64 -7.072 -2.585 -0.276 IL 116 116 3 116 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - A - - - ML 117 116 3 119 3 1 1 45 65 -8.307 -0.016 -6.961 1.833 -3.065 -2.629 -2.678 D 118 116 3 119 3 0 0 43 63 -7.072 -2.585 -0.276 IL 119 119 3 119 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - C - - - ML 120 119 3 122 3 1 1 44 64 -4.525 -0.076 -6.995 -1.481 1.503 -1.675 -1.018 D 121 119 3 122 3 0 0 42 62 -6.229 -1.343 -0.755 IL 122 122 3 122 3 1 1 45 65 -1.632 -0.654 -4.580 0.000 0.000 0.000 0.000 [ MATR 31 ] - 56 - U - - MR 123 122 3 125 3 1 1 43 63 -8.677 -0.015 -6.995 -2.137 -2.023 -2.896 1.762 D 124 122 3 125 3 0 0 41 61 -7.179 -2.357 -0.326 IR 125 125 3 125 3 1 1 44 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 55 - a - - MR 126 125 3 128 3 1 1 42 62 -8.677 -0.015 -6.995 0.865 -1.716 0.509 -1.147 D 127 125 3 128 3 0 0 40 60 -7.179 -0.698 -1.409 IR 128 128 3 128 3 1 1 42 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 54 - u - - MR 129 128 3 131 3 1 1 41 61 -8.774 -0.014 -7.092 0.176 -0.813 -1.331 0.928 D 130 128 3 131 3 0 0 39 59 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 41 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 53 - A - - MR 132 131 3 134 5 1 1 40 60 -7.489 -0.030 -7.304 -7.516 -8.408 1.204 -0.862 -0.748 -0.861 D 133 131 3 134 5 0 0 38 58 -5.352 -0.707 -2.978 -4.409 -2.404 IR 134 134 3 134 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 27 52 U A - - MP 135 134 3 139 6 2 2 39 59 -9.307 -9.246 -0.018 -8.023 -8.303 -8.698 -3.331 -3.383 -3.423 0.028 -2.898 -4.194 1.178 -3.436 -3.447 0.166 -3.961 -1.622 3.173 -1.766 0.065 -2.426 ML 136 134 3 139 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 3 139 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 3 139 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 28 51 G C - - MP 141 140 6 145 6 2 2 37 57 -9.307 -9.246 -0.018 -8.023 -8.303 -8.698 -4.510 -1.031 -4.503 0.418 -5.385 -4.668 -0.647 -5.010 -4.371 3.529 -4.684 -0.176 -0.914 -4.220 -2.647 -3.442 ML 142 140 6 145 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 29 50 A U - - MP 147 146 6 151 6 2 2 35 55 -9.307 -9.246 -0.018 -8.023 -8.303 -8.698 -4.647 -3.492 -4.565 3.690 -5.385 -6.562 -1.027 -4.547 -4.466 0.147 -5.054 -0.855 -1.436 -5.576 -2.962 -3.380 ML 148 146 6 151 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 34 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 34 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 30 49 G C - - MP 153 152 6 157 6 2 2 33 53 -9.307 -9.246 -0.018 -8.023 -8.303 -8.698 -4.528 -3.010 -4.551 0.435 -5.489 -4.858 -0.738 -4.964 -4.347 3.430 -4.708 1.069 -1.004 -4.387 -2.747 -3.430 ML 154 152 6 157 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 31 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 32 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 31 48 C G - - MP 159 158 6 163 4 2 2 31 51 -7.422 -4.674 -0.090 -6.043 -3.403 -3.422 -3.431 0.117 -2.683 -4.131 3.080 -3.300 -3.443 0.254 -1.001 -1.567 1.199 -3.635 0.237 -2.410 ML 160 158 6 163 4 1 1 31 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 4 1 1 30 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 29 49 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 32 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 31 51 -1.582 -0.702 -4.282 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - A - - - ML 165 164 6 167 3 1 1 28 48 -8.409 -0.015 -7.063 1.463 -1.461 -1.079 -1.295 D 166 164 6 167 3 0 0 27 47 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 30 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 33 - U - - - ML 168 167 3 170 3 1 1 27 47 -8.409 -0.015 -7.063 -2.333 -2.187 -3.098 1.793 D 169 167 3 170 3 0 0 26 46 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - G - - - ML 171 170 3 173 3 1 1 26 46 -8.409 -0.015 -7.063 -0.024 -1.723 1.134 -0.948 D 172 170 3 173 3 0 0 25 45 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 35 - A - - - ML 174 173 3 176 3 1 1 25 45 -8.409 -0.015 -7.063 1.856 -3.268 -2.815 -2.903 D 175 173 3 176 3 0 0 24 44 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 36 - U - - - ML 177 176 3 179 3 1 1 24 44 -8.409 -0.015 -7.063 -0.540 -1.325 -1.843 1.398 D 178 176 3 179 3 0 0 23 43 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 37 - G - - - ML 180 179 3 182 3 1 1 23 43 -4.271 -0.088 -7.063 -1.250 -2.145 1.491 -0.883 D 181 179 3 182 3 0 0 21 41 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 25 45 -1.325 -0.843 -4.530 0.000 0.000 0.000 0.000 [ MATL 46 ] 40 - A - - - ML 183 182 3 185 3 1 1 20 38 -8.409 -0.015 -7.063 1.856 -3.268 -2.815 -2.903 D 184 182 3 185 3 0 0 19 38 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 41 - A - - - ML 186 185 3 188 3 1 1 18 37 -8.409 -0.015 -7.063 1.619 -1.532 -1.945 -1.627 D 187 185 3 188 3 0 0 18 37 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 42 - g - - - ML 189 188 3 191 3 1 1 17 36 -8.409 -0.015 -7.063 0.481 -1.923 0.964 -1.356 D 190 188 3 191 3 0 0 17 35 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 43 - U - - - ML 192 191 3 194 3 1 1 16 34 -8.409 -0.015 -7.063 -0.793 -0.936 -1.386 1.332 D 193 191 3 194 3 0 0 16 34 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 44 - G - - - ML 195 194 3 197 3 1 1 14 33 -8.409 -0.015 -7.063 -0.162 -2.237 1.369 -1.681 D 196 194 3 197 3 0 0 15 33 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 45 - A - - - ML 198 197 3 200 3 1 1 13 31 -8.409 -0.015 -7.063 1.669 -2.208 -2.103 -1.429 D 199 197 3 200 3 0 0 13 32 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 46 - A - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 1.205 -1.151 -0.681 -0.690 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 53 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD64 ACC RF00570 DESC Small Nucleolar RNA SNORD64 LENG 67 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 11:45:26 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00570/CM NSEQ 17 EFFN 4.536377 CKSUM 2950120438 STATS LOCAL MSV -8.1129 0.71900 STATS LOCAL VITERBI -9.1381 0.71900 STATS LOCAL FORWARD -3.4639 0.71900 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.22935 1.79124 1.41726 1.20936 1.38629 1.38629 1.38629 1.38629 0.05996 4.27799 3.11621 1.46634 0.26236 0.00000 * 1 2.15934 2.82377 0.30758 2.40802 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 2 2.09157 3.07591 0.25255 2.92728 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 3 0.44864 1.84246 2.13591 2.46582 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 4 2.00907 1.39015 2.33315 0.65420 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.07877 4.24706 2.78965 1.46634 0.26236 1.64782 0.21377 5 2.48566 1.46554 2.33555 0.52930 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.03049 4.19878 4.19878 1.46634 0.26236 2.13894 0.12531 6 1.45617 1.68669 2.00711 0.80438 6 u - - - 1.38629 1.38629 1.38629 1.38629 0.03049 4.19878 4.19878 1.46634 0.26236 0.68153 0.70490 7 0.37770 2.14561 2.31343 2.31619 7 A - - - 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 8 3.34405 3.19072 3.88209 0.10208 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 9 2.07564 3.48920 0.22333 3.12029 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.11157 4.24706 2.39399 1.46634 0.26236 1.64782 0.21377 10 0.18729 3.24998 2.49914 2.99840 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.03149 4.16698 4.16698 1.46634 0.26236 2.35849 0.09934 11 3.19434 3.06329 3.72931 0.11849 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.03149 4.16698 4.16698 1.46634 0.26236 0.50542 0.92445 12 2.70967 3.60552 0.13316 3.47569 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 13 0.13683 3.75075 2.55290 3.62952 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 14 2.02324 2.58643 0.37516 2.25087 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.07877 4.24706 2.78965 1.46634 0.26236 1.64782 0.21377 15 1.86863 0.48176 2.88424 1.75985 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.03049 4.19878 4.19878 1.46634 0.26236 2.13894 0.12531 16 3.25434 3.11422 3.79059 0.11160 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.09018 4.19878 2.64200 1.46634 0.26236 2.13894 0.12531 17 1.07094 1.83157 1.26218 1.54123 17 a - - - 1.38629 1.38629 1.38629 1.38629 0.03233 4.14093 4.14093 1.46634 0.26236 2.50422 0.08527 18 1.87171 2.40440 2.79303 0.36444 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.03233 4.14093 4.14093 1.46634 0.26236 0.17850 1.81107 19 2.57788 3.86401 0.13666 3.47969 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 20 3.63918 2.15090 3.47042 0.19087 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 21 1.77634 1.55950 1.58177 0.87973 21 u - - < 1.38629 1.38629 1.38629 1.38629 0.10798 4.27799 2.42492 1.46634 0.26236 1.09861 0.40547 22 2.46451 2.53197 2.52789 0.28022 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.03044 4.20044 4.20044 1.46634 0.26236 2.12577 0.12708 23 0.07588 3.91226 3.57723 3.68385 23 A - - - 1.38629 1.38629 1.38629 1.38629 0.03044 4.20044 4.20044 1.46634 0.26236 2.12577 0.12708 24 2.77593 0.24893 2.71037 2.39074 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.08045 2.77565 4.20044 0.86400 0.54727 0.27270 1.43262 25 2.75126 2.00450 2.57656 0.32105 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 26 2.22607 3.33741 0.20374 3.19805 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 27 0.12767 3.82816 2.61107 3.70294 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 28 2.51783 3.41834 0.16432 3.26685 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 29 2.67127 0.53217 2.11926 1.49884 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 30 0.31513 2.50989 2.22439 2.51457 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 31 3.40057 3.23917 3.93968 0.09652 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 32 1.44504 2.76638 0.52901 2.18761 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 33 0.06520 4.05849 3.71330 3.84199 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 34 1.84907 2.51801 2.90446 0.34642 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 35 2.50916 3.15112 0.28426 2.09323 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08430 2.70351 4.27799 0.83991 0.56519 1.09861 0.40547 36 0.06520 4.05849 3.71330 3.84199 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 37 0.20994 2.54830 2.99491 2.79511 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 38 1.03479 2.97432 0.65496 2.60156 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 39 2.07977 2.15234 2.46301 0.39504 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 40 1.54259 3.19502 0.37653 2.83079 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 41 0.17929 3.16924 3.12052 2.55145 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 42 0.49355 2.27268 1.90669 1.98095 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06494 3.01588 4.27799 0.49372 0.94252 1.09861 0.40547 43 1.88873 2.64567 0.36874 2.45139 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 44 3.48761 0.34014 3.23787 1.52095 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 45 3.92215 2.99536 3.63648 0.10110 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 46 3.43474 0.22459 3.16368 2.06629 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 47 0.43973 2.50794 1.62900 2.54808 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 48 0.49065 2.02470 1.96087 2.16282 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 49 1.26193 2.03759 2.43177 0.69581 54 u - - - 1.38629 1.38629 1.38629 1.38629 0.10798 4.27799 2.42492 1.46634 0.26236 1.09861 0.40547 50 0.73940 2.81588 0.97957 2.43870 55 a - - - 1.38629 1.38629 1.38629 1.38629 0.03044 4.20044 4.20044 1.46634 0.26236 2.12577 0.12708 51 3.25746 3.11688 3.79378 0.11126 56 U - - - 1.38629 1.38629 1.38629 1.38629 0.07915 2.79511 4.20044 0.86742 0.54479 0.27270 1.43262 52 1.53150 1.91572 0.91268 1.44771 59 g - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 53 0.18530 3.64415 2.20733 3.41107 60 A - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 54 2.03585 2.35644 1.40504 0.63617 61 U - - - 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 55 1.80862 2.50348 2.87927 0.35933 62 U - - - 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 56 0.31149 2.78142 2.32260 2.22861 63 A - - - 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 57 2.46473 0.46472 2.39283 1.63327 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 58 3.69658 2.88793 3.49231 0.11758 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 59 3.48557 0.22684 3.35572 1.98463 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 60 3.40057 3.23917 3.93968 0.09652 67 U - - - 1.38629 1.38629 1.38629 1.38629 0.10798 4.27799 2.42492 1.46634 0.26236 1.09861 0.40547 61 2.33971 3.62579 0.17663 3.24611 68 G - - - 1.38629 1.38629 1.38629 1.38629 0.03044 4.20044 4.20044 1.46634 0.26236 2.12577 0.12708 62 0.07588 3.91226 3.57723 3.68385 69 A - - - 1.38629 1.38629 1.38629 1.38629 0.03044 4.20044 4.20044 1.46634 0.26236 0.27270 1.43262 63 0.67204 2.01826 1.37200 2.27449 70 A - - > 1.38629 1.38629 1.38629 1.38629 0.02813 4.27799 4.27799 1.46634 0.26236 1.09861 0.40547 64 2.03035 2.50309 0.50603 1.69285 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.05996 4.27799 3.11621 1.46634 0.26236 1.09861 0.40547 65 2.72132 2.38935 1.73921 0.40517 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 66 3.17781 0.33939 2.89102 1.65757 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.02903 4.24706 4.24706 1.46634 0.26236 1.64782 0.21377 67 2.94746 0.39689 2.63663 1.59202 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.01462 4.23265 * 1.46634 0.26236 0.00000 * //