INFERNAL1/a [1.1.5 | Sep 2023] NAME Prion_pknot ACC RF00523 DESC Prion pseudoknot STATES 124 NODES 36 CLEN 40 W 71 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 18:06:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00523/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 148 EFFN 14.493774 CKSUM 2070609849 NULL 0.000 0.000 0.000 0.000 GA 39.00 TC 39.00 NC 38.90 EFP7GF -17.4462 0.71960 ECMLC 0.54795 -11.03654 1.51813 1600000 1166434 0.001029 ECMGC 0.39339 -24.18214 -4.95069 1600000 772162 0.000518 ECMLI 0.52216 -10.38918 2.09963 1600000 815209 0.001472 ECMGI 0.39087 -23.45969 -3.93342 1600000 825429 0.000485 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 108 -8.961 -10.207 -0.018 -6.660 IL 1 1 2 1 4 1 1 73 109 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 1 73 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 54 - G - - MR 3 2 3 5 3 1 4 71 108 -10.389 -0.005 -8.707 -3.504 -2.096 1.856 -4.079 D 4 2 3 5 3 0 0 69 106 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 1 72 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 53 - G - - MR 6 5 3 8 3 1 3 70 107 -10.389 -0.005 -8.707 -2.287 -2.685 1.830 -3.559 D 7 5 3 8 3 0 0 68 105 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 1 71 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 52 - U - - MR 9 8 3 11 3 1 3 69 106 -10.389 -0.005 -8.707 -1.787 -2.979 -2.877 1.785 D 10 8 3 11 3 0 0 67 104 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 1 70 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 51 - C - - MR 12 11 3 14 3 1 2 68 105 -10.389 -0.005 -8.707 -2.281 1.660 -3.968 -0.813 D 13 11 3 14 3 0 0 66 103 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 1 69 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 50 - G - - MR 15 14 3 17 3 1 2 67 104 -10.389 -0.005 -8.707 -4.792 -6.410 1.975 -5.529 D 16 14 3 17 3 0 0 65 102 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 1 68 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 49 - G - - MR 18 17 3 20 3 1 2 66 103 -10.389 -0.005 -8.707 -2.092 -5.225 1.887 -4.619 D 19 17 3 20 3 0 0 64 101 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 1 67 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 48 - U - - MR 21 20 3 23 3 1 1 65 102 -10.389 -0.041 -5.186 -0.290 -0.641 -2.145 1.211 D 22 20 3 23 3 0 0 63 100 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 1 66 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 47 - G - - MR 24 23 3 26 3 1 1 64 101 -10.352 -0.005 -8.670 -4.753 -6.365 1.974 -5.489 D 25 23 3 26 3 0 0 61 98 -7.282 -2.460 -0.301 IR 26 26 3 26 3 1 1 65 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 46 - G - - MR 27 26 3 29 3 1 1 63 100 -10.352 -0.005 -8.670 -4.753 -6.365 1.974 -5.489 D 28 26 3 29 3 0 0 60 97 -7.282 -2.460 -0.301 IR 29 29 3 29 3 1 1 64 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 45 - U - - MR 30 29 3 32 5 1 1 62 99 -2.463 -0.298 -8.833 -9.045 -9.937 -0.339 -0.995 -1.588 1.248 D 31 29 3 32 5 0 0 59 95 -5.917 -0.438 -3.544 -4.975 -2.969 IR 32 32 3 32 5 1 1 65 102 -0.748 -1.362 -8.671 -6.838 -7.944 0.000 0.000 0.000 0.000 [ MATP 11 ] 1 41 C G - - MP 33 32 3 37 6 2 2 58 94 -10.347 -10.286 -0.009 -9.063 -9.343 -9.738 -5.167 -5.247 -1.664 -1.671 -4.112 -5.671 3.149 -1.950 -5.112 -1.595 0.204 -3.430 -0.551 -5.347 1.902 -4.050 ML 34 32 3 37 6 1 1 56 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 3 37 6 1 1 56 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 3 37 6 0 0 53 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 58 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 57 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 2 40 C G - - MP 39 38 6 43 6 2 2 56 92 -10.347 -10.286 -0.009 -9.063 -9.343 -9.738 -7.046 -7.224 -6.371 -3.449 -4.750 -6.528 3.787 -5.685 -6.491 -3.432 0.396 -5.454 -1.494 -6.921 -2.484 -5.296 ML 40 38 6 43 6 1 1 54 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 54 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 51 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 56 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 55 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 3 39 A U - - MP 45 44 6 49 6 2 2 54 90 -10.347 -10.286 -0.009 -9.063 -9.343 -9.738 -5.929 1.023 -6.114 3.524 -8.180 -9.168 -3.627 -6.172 -5.696 0.113 -6.357 0.098 -3.581 -7.340 -5.470 -4.724 ML 46 44 6 49 6 1 1 53 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 52 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 49 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 54 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 53 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 4 38 U A - - MP 51 50 6 55 6 2 2 52 88 -10.347 -10.286 -0.009 -9.063 -9.343 -9.738 -2.730 -4.012 -4.019 -0.095 0.893 -4.797 0.562 -4.033 0.197 -0.588 -4.558 -2.292 3.103 -4.198 -0.896 -3.076 ML 52 50 6 55 6 1 1 51 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 50 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 48 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 52 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 51 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 5 37 G C - - MP 57 56 6 61 6 2 2 50 86 -10.347 -10.286 -0.035 -5.685 -9.343 -9.738 -7.536 -1.182 -8.295 -1.992 -9.024 -6.110 -3.696 -8.502 -6.164 3.869 -6.396 -1.096 -4.000 -6.398 -5.951 -7.171 ML 58 56 6 61 6 1 1 49 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 49 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 46 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 50 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 49 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 6 36 G C - - MP 63 62 6 67 4 2 2 48 84 -9.105 -9.312 -0.012 -7.726 -5.391 -3.873 -5.329 -0.100 -6.508 -5.728 -1.601 -5.880 0.030 3.337 -2.002 1.463 -1.850 -5.159 -3.613 -4.237 ML 64 62 6 67 4 1 1 49 85 -1.541 -4.437 -1.003 -3.166 1.092 -0.966 -0.712 -0.423 MR 65 62 6 67 4 1 1 47 83 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 0 46 82 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 1 49 85 -1.311 -3.334 -1.059 -5.819 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 1 48 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 9 - U - - - ML 69 68 6 71 3 1 1 46 82 -10.073 -0.005 -8.727 -0.246 -1.086 -1.932 1.277 D 70 68 6 71 3 0 0 44 80 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 1 47 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - G - - - ML 72 71 3 74 3 1 1 45 81 -10.073 -0.005 -8.727 -4.792 -6.410 1.975 -5.529 D 73 71 3 74 3 0 0 43 79 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 1 46 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - G - - - ML 75 74 3 77 3 1 1 44 80 -4.478 -0.070 -8.727 -4.792 -6.410 1.975 -5.529 D 76 74 3 77 3 0 0 42 78 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 47 83 -0.894 -1.192 -5.356 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - U - - - ML 78 77 3 80 3 1 1 43 79 -10.073 -0.005 -8.727 -1.379 -0.130 -2.252 1.317 D 79 77 3 80 3 0 0 40 76 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 1 44 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - G - - - ML 81 80 3 83 3 1 1 42 78 -10.073 -0.005 -8.727 -2.573 -5.524 1.917 -4.863 D 82 80 3 83 3 0 0 39 75 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 43 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 17 - G - - - ML 84 83 3 86 3 1 1 41 77 -3.108 -0.182 -8.727 -4.792 -6.410 1.975 -5.529 D 85 83 3 86 3 0 0 36 72 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 44 80 -0.738 -1.367 -6.298 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - C - - - ML 87 86 3 89 3 1 1 26 48 -10.073 -0.005 -8.727 -3.139 1.845 -4.574 -1.988 D 88 86 3 89 3 0 0 25 46 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 28 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - U - - - ML 90 89 3 92 3 1 1 25 47 -10.073 -0.005 -8.727 -4.020 -2.946 -4.764 1.915 D 91 89 3 92 3 0 0 24 45 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 27 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - G - - - ML 93 92 3 95 3 1 1 24 46 -10.073 -0.005 -8.727 -4.792 -6.410 1.975 -5.529 D 94 92 3 95 3 0 0 23 44 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 26 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 24 - G - - - ML 96 95 3 98 3 1 1 23 45 -10.073 -0.005 -8.727 -4.792 -6.410 1.975 -5.529 D 97 95 3 98 3 0 0 22 43 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 25 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 25 - G - - - ML 99 98 3 101 3 1 1 22 44 -10.073 -0.005 -8.727 -4.792 -6.410 1.975 -5.529 D 100 98 3 101 3 0 0 21 42 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 24 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 26 - G - - - ML 102 101 3 104 3 1 1 21 43 -6.763 -0.035 -6.069 -4.792 -6.410 1.975 -5.529 D 103 101 3 104 3 0 0 20 42 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 25 47 -1.226 -0.924 -4.462 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - a - - - ML 105 104 3 107 3 1 1 17 36 -10.055 -0.005 -8.709 0.525 -0.723 -0.429 0.278 D 106 104 3 107 3 0 0 17 36 -6.759 -2.272 -0.352 IL 107 107 3 107 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 108 107 3 110 3 1 1 16 34 -10.055 -0.005 -8.709 -5.365 1.968 -5.852 -4.467 D 109 107 3 110 3 0 0 16 35 -6.759 -2.272 -0.352 IL 110 110 3 110 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 111 110 3 113 3 1 1 15 33 -10.055 -0.005 -8.709 1.947 -5.162 -3.573 -4.951 D 112 110 3 113 3 0 0 15 34 -6.759 -2.272 -0.352 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 114 113 3 116 3 1 1 13 32 -10.055 -0.005 -8.709 -0.895 -4.428 1.744 -3.937 D 115 113 3 116 3 0 0 14 33 -6.759 -2.272 -0.352 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 117 116 3 119 3 1 1 12 30 -10.055 -0.005 -8.709 -5.365 1.968 -5.852 -4.467 D 118 116 3 119 3 0 0 13 31 -6.759 -2.272 -0.352 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - C - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 -4.947 1.940 -5.436 -3.232 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Prion_pknot ACC RF00523 DESC Prion pseudoknot LENG 40 MAXL 102 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 18:06:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00523/CM NSEQ 148 EFFN 16.824341 CKSUM 2070609849 STATS LOCAL MSV -7.0110 0.71960 STATS LOCAL VITERBI -7.8240 0.71960 STATS LOCAL FORWARD -3.9686 0.71960 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 2.10961 1.47277 0.75620 1.71490 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 0.00000 * 1 3.31394 0.52831 2.35432 1.27631 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 2 4.81814 0.14743 2.34870 3.39607 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 3 0.15902 5.09490 2.02713 4.69111 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 4 2.74782 1.57583 2.12297 0.49524 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 5 3.13458 5.14690 0.05705 5.09671 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 6 2.68916 3.86220 0.12148 3.67192 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03381 3.56053 5.33555 0.81294 0.58618 1.09861 0.40547 7 1.56245 2.16696 2.78566 0.48749 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 8 4.84489 5.98701 0.01521 5.35785 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 9 4.84489 5.98701 0.01521 5.35785 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05547 3.01306 5.33555 1.12546 0.39231 1.09861 0.40547 10 2.39641 1.47256 3.00975 0.46154 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 11 3.19111 5.39126 0.05445 4.91818 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 12 4.84489 5.98701 0.01521 5.35785 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.13436 2.11273 5.33555 1.10935 0.40014 1.09861 0.40547 13 3.62179 0.10160 4.67559 2.80416 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 14 4.31034 3.48953 4.82647 0.05336 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 15 4.84489 5.98701 0.01521 5.35785 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 16 4.84489 5.98701 0.01521 5.35785 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 17 4.84489 5.98701 0.01521 5.35785 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 18 4.84489 5.98701 0.01521 5.35785 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03112 4.32975 4.04754 1.20679 0.35547 1.09861 0.40547 19 1.01560 1.90217 1.68418 1.19411 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.00981 5.32282 5.32282 1.46634 0.26236 1.72732 0.19572 20 5.24758 0.01900 5.57451 4.62838 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00981 5.32282 5.32282 1.46634 0.26236 1.72732 0.19572 21 0.03324 5.12686 3.92003 4.97302 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00981 5.32282 5.32282 1.46634 0.26236 1.72732 0.19572 22 2.00849 4.61807 0.17196 4.27396 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00981 5.32282 5.32282 1.46634 0.26236 1.72732 0.19572 23 5.24758 0.01900 5.57451 4.62838 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00981 5.32282 5.32282 1.46634 0.26236 1.72732 0.19572 24 4.94827 0.03806 5.26946 3.68481 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03425 5.32282 3.54780 1.46634 0.26236 0.43931 1.03417 25 2.47330 0.44022 3.25071 1.45649 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.00992 5.31166 5.31166 1.46634 0.26236 0.29189 1.37377 26 5.15677 0.05759 5.03207 3.13089 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 27 0.24171 3.28015 2.20680 2.70240 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 28 4.81854 1.64447 4.83835 0.23460 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 29 3.69007 4.88146 0.04379 4.57657 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 30 3.25343 4.05143 0.09729 3.30574 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.24584 1.67440 3.48886 1.10551 0.40203 1.09861 0.40547 31 1.63194 2.10061 2.52566 0.50740 45 U - - : 1.38629 1.38629 1.38629 1.38629 0.00994 5.30950 5.30950 1.46634 0.26236 2.12092 0.12774 32 4.81832 5.95659 0.01563 5.33080 46 G - - : 1.38629 1.38629 1.38629 1.38629 0.00994 5.30950 5.30950 1.46634 0.26236 2.12092 0.12774 33 4.81832 5.95659 0.01563 5.33080 47 G - - : 1.38629 1.38629 1.38629 1.38629 0.00994 5.30950 5.30950 1.46634 0.26236 0.27423 1.42777 34 1.59568 1.84237 2.95308 0.53340 48 U - - : 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 35 2.84969 5.18363 0.07484 4.75141 49 G - - : 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 36 4.84489 5.98701 0.01521 5.35785 50 G - - : 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 37 3.01972 0.22642 4.25672 1.96876 51 C - - : 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 38 2.64745 3.57000 3.42389 0.14107 52 U - - : 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 39 3.03150 3.26372 0.11116 3.97855 53 G - - : 1.38629 1.38629 1.38629 1.38629 0.00968 5.33555 5.33555 1.46634 0.26236 1.09861 0.40547 40 4.00076 2.83020 0.09383 4.40125 54 G - - : 1.38629 1.38629 1.38629 1.38629 0.00485 5.33072 * 1.46634 0.26236 0.00000 * //