INFERNAL1/a [1.1.4 | Dec 2020] NAME Flavi_CRE ACC RF00185 DESC Flavivirus 3' UTR cis-acting replication element (CRE) STATES 297 NODES 78 CLEN 96 W 127 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:23:21 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 84 EFFN 2.504517 CKSUM 3881150971 NULL 0.000 0.000 0.000 0.000 GA 42.00 TC 42.50 NC 41.90 EFP7GF -8.5953 0.71863 ECMLC 0.59762 -8.74111 1.18548 1600000 452441 0.002652 ECMGC 0.40932 -13.43335 -3.07607 1600000 27748 0.014415 ECMLI 0.55812 -5.53421 4.14320 1600000 265985 0.004512 ECMGI 0.45872 -7.35122 1.86485 1600000 27422 0.014587 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 1 1 127 164 -5.496 -15.965 -0.032 IL 1 1 2 1 3 11 43 137 181 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 10 42 128 165 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 4 48 9 41 127 164 [ BEGL 2 ] - - - - - - S 4 3 1 5 4 0 0 29 47 -0.041 -6.948 -6.355 -6.995 [ MATP 3 ] 1 16 C G - - MP 5 4 1 9 6 2 2 29 47 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -5.025 -4.938 -3.731 -1.168 -3.570 -5.218 3.707 -4.406 -4.845 -0.946 -5.083 -2.881 -0.033 -5.139 -1.334 -3.696 ML 6 4 1 9 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 7 4 1 9 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 8 4 1 9 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 9 9 5 9 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 10 10 6 10 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 15 c g - - MP 11 10 6 15 6 2 2 27 45 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -2.421 -2.519 -0.237 0.755 -2.196 -3.362 2.101 -2.677 -2.592 0.837 -3.129 -0.871 1.953 -2.712 0.474 -1.668 ML 12 10 6 15 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 13 10 6 15 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 14 10 6 15 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 15 15 5 15 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 16 16 6 16 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 14 g c - - MP 17 16 6 21 6 2 2 25 43 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -2.958 -2.041 -3.001 1.283 -3.144 -3.714 1.284 -3.340 -3.156 2.507 -3.585 0.745 0.735 -3.015 -0.400 -2.038 ML 18 16 6 21 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 19 16 6 21 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 20 16 6 21 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 21 21 5 21 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 22 22 6 22 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 13 g c - - MP 23 22 6 27 4 2 2 23 41 -5.951 -7.373 -0.059 -5.787 -3.197 -2.453 -3.189 1.175 -3.327 -3.890 1.150 -3.523 -3.380 2.828 -3.031 -0.258 0.662 -3.188 -0.315 -2.196 ML 24 22 6 27 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 25 22 6 27 4 1 1 23 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 26 22 6 27 4 0 0 22 40 -4.568 -4.250 -2.265 -0.520 IL 27 27 5 27 4 1 1 24 43 -1.752 -2.435 -1.043 -4.921 0.000 0.000 0.000 0.000 IR 28 28 6 28 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - G - - - ML 29 28 6 31 3 1 1 19 38 -8.168 -0.089 -4.158 -0.845 -1.403 1.407 -1.275 D 30 28 6 31 3 0 0 18 37 -6.174 -1.687 -0.566 IL 31 31 3 31 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - A - - - ML 32 31 3 34 3 1 1 18 36 -8.098 -0.019 -6.752 1.476 -1.756 -1.021 -1.219 D 33 31 3 34 3 0 0 17 35 -6.762 -2.275 -0.351 IL 34 34 3 34 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - a - - - ML 35 34 3 37 3 1 1 16 35 -2.536 -0.289 -6.752 0.899 -0.800 -0.699 -0.081 D 36 34 3 37 3 0 0 15 33 -6.762 -0.886 -1.153 IL 37 37 3 37 3 1 1 17 35 -1.958 -0.508 -4.658 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 38 37 3 40 3 1 1 15 33 -8.168 -0.018 -6.822 1.738 -2.462 -2.165 -1.941 D 39 37 3 40 3 0 0 15 33 -6.174 -1.687 -0.566 IL 40 40 3 40 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 41 40 3 43 3 1 1 13 31 -8.168 -0.018 -6.822 -0.837 -2.330 1.552 -1.699 D 42 40 3 43 3 0 0 13 32 -6.174 -1.687 -0.566 IL 43 43 3 43 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 44 43 3 46 2 1 1 1 1 * 0.000 1.634 -1.793 -1.844 -1.606 D 45 43 3 46 2 0 0 0 0 * 0.000 IL 46 46 3 46 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 13 ] - - - - - - E 47 46 3 -1 0 0 0 0 0 [ BEGR 14 ] - - - - - - S 48 3 1 49 3 1 29 112 150 -8.168 -0.229 -2.803 IL 49 49 2 49 3 2 30 114 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - G - - - ML 50 49 2 52 5 3 29 113 150 -2.406 -0.393 -4.695 -7.117 -8.009 0.074 -1.642 1.100 -1.048 D 51 49 2 52 5 0 26 111 148 -5.812 -0.623 -2.799 -3.448 -3.361 IL 52 52 3 52 5 2 29 112 150 -2.720 -0.549 -2.874 -6.556 -5.830 0.000 0.000 0.000 0.000 [ MATP 16 ] 20 118 g c - - MP 53 52 3 57 6 4 29 111 149 -9.116 -9.056 -0.021 -7.832 -8.112 -8.507 -1.857 -1.949 -2.202 1.675 -2.363 -3.191 1.344 -2.681 -2.463 1.744 -2.986 0.508 1.417 -2.482 -0.359 -1.528 ML 54 52 3 57 6 1 26 109 147 -7.055 -7.401 -2.116 -0.488 -7.251 -4.781 0.605 -0.868 0.150 -0.283 MR 55 52 3 57 6 1 26 110 147 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 3 57 6 0 22 107 144 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 27 111 148 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 27 111 148 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 21 117 G C - - MP 59 58 6 63 6 4 27 109 147 -9.116 -9.056 -0.021 -7.832 -8.112 -8.507 -4.384 -1.917 -4.434 0.456 -5.035 -4.539 -0.427 -4.822 -4.171 3.551 -4.514 -0.613 -0.726 -4.153 -2.427 -3.362 ML 60 58 6 63 6 1 25 108 145 -7.055 -7.401 -2.116 -0.488 -7.251 -4.781 -0.243 -1.191 1.041 -0.601 MR 61 58 6 63 6 1 24 108 145 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 22 106 143 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 26 109 146 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 26 109 146 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 22 116 g c - - MP 65 64 6 69 4 2 25 107 145 -6.971 -7.178 -0.311 -2.483 -2.136 -2.341 -2.794 1.761 -2.713 -3.590 1.682 -3.029 -2.887 2.092 -3.380 -0.314 1.043 -2.883 -0.514 -1.846 ML 66 64 6 69 4 1 24 107 144 -4.397 -4.579 -0.743 -1.675 0.552 -0.445 -0.251 -0.061 MR 67 64 6 69 4 1 23 106 144 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 68 64 6 69 4 0 22 105 142 -4.568 -4.250 -2.265 -0.520 IL 69 69 5 69 4 1 25 108 145 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 70 70 6 70 3 1 25 107 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - U - - - ML 71 70 6 73 3 1 24 106 143 -8.244 -0.105 -3.907 -0.748 -0.938 -1.264 1.302 D 72 70 6 73 3 0 21 104 142 -3.404 -0.672 -1.847 IL 73 73 3 73 3 1 23 106 143 -2.071 -0.701 -2.769 0.000 0.000 0.000 0.000 [ MATR 20 ] - 115 - a - - MR 74 73 3 76 5 1 23 105 142 -7.112 -0.039 -6.928 -7.140 -8.031 0.624 -0.220 -1.000 0.137 D 75 73 3 76 5 0 19 103 140 -6.027 -1.309 -1.206 -5.085 -3.079 IR 76 76 3 76 5 1 22 105 142 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 25 114 c g - - MP 77 76 3 81 6 2 22 104 141 -9.121 -9.060 -0.021 -7.836 -8.116 -8.511 -2.832 -2.718 -2.483 0.844 -2.234 -3.723 2.293 -2.932 -2.944 1.600 -3.460 -0.758 1.721 -3.062 -0.174 -1.901 ML 78 76 3 81 6 1 20 102 139 -7.022 -7.368 -2.082 -0.502 -7.218 -4.747 0.027 -0.157 -0.057 0.167 MR 79 76 3 81 6 1 19 102 139 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 3 81 6 0 16 99 136 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 21 103 140 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 21 103 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 26 113 c g - - MP 83 82 6 87 6 2 20 102 139 -9.121 -9.060 -0.024 -7.836 -8.116 -7.769 -2.490 -2.538 -2.614 0.829 -0.153 -3.424 2.053 -2.702 -2.644 1.432 -3.178 -0.796 1.445 -2.768 0.757 -1.689 ML 84 82 6 87 6 1 19 100 137 -7.022 -7.368 -2.082 -0.611 -7.218 -3.497 0.004 -0.094 -0.278 0.305 MR 85 82 6 87 6 1 18 100 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 6 87 6 0 16 98 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 19 101 138 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 19 101 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 27 112 U A - - MP 89 88 6 93 4 2 18 100 137 -6.975 -7.182 -0.579 -1.664 -2.896 -3.595 -3.714 -0.015 -3.037 -4.450 1.211 -3.611 -3.723 0.261 -4.207 -1.634 3.269 -3.902 -0.670 -2.609 ML 90 88 6 93 4 1 18 99 136 -4.306 -4.488 -0.430 -2.619 -0.282 -0.554 -0.913 0.975 MR 91 88 6 93 4 1 17 99 136 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 92 88 6 93 4 0 16 98 135 -4.750 -4.431 -1.730 -0.701 IL 93 93 5 93 4 1 19 100 137 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 94 94 6 94 3 1 18 100 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - u - - - ML 95 94 6 97 3 1 17 98 135 -7.735 -0.024 -6.389 -0.139 -0.740 -0.049 0.610 D 96 94 6 97 3 0 15 97 134 -8.086 -0.292 -2.478 IL 97 97 3 97 3 1 17 99 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - C - - - ML 98 97 3 100 3 1 16 97 134 -8.168 -0.018 -6.822 -1.944 1.650 -2.781 -1.134 D 99 97 3 100 3 0 13 95 132 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 16 98 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - U - - - ML 101 100 3 103 3 1 15 96 133 -8.168 -0.018 -6.822 -1.706 -1.573 -2.451 1.666 D 102 100 3 103 3 0 12 94 131 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 15 97 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - g - - - ML 104 103 3 106 3 1 14 95 132 -8.168 -0.229 -2.803 -0.452 -1.251 0.887 -0.001 D 105 103 3 106 3 0 12 93 130 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 15 96 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - c - - - ML 107 106 3 109 3 1 14 94 131 -1.634 -0.583 -6.614 -0.385 0.510 -0.011 -0.290 D 108 106 3 109 3 0 11 92 129 -7.456 -0.481 -1.848 IL 109 109 3 109 3 1 14 94 131 -2.238 -0.405 -4.938 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - U - - - ML 110 109 3 112 3 1 13 93 130 -8.168 -0.018 -6.822 -1.870 -1.801 -2.621 1.712 D 111 109 3 112 3 0 9 90 128 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 13 93 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - C - - - ML 113 112 3 115 3 1 12 92 129 -8.168 -0.018 -6.822 -1.191 1.228 -2.033 -0.036 D 114 112 3 115 3 0 8 89 127 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 12 92 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - U - - - ML 116 115 3 118 3 1 11 91 128 -8.168 -0.018 -6.822 -1.870 -1.801 -2.621 1.712 D 117 115 3 118 3 0 7 88 126 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 11 91 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - c - - - ML 119 118 3 121 3 1 11 90 127 -8.168 -0.068 -4.543 0.062 0.634 -0.894 -0.208 D 120 118 3 121 3 0 7 87 124 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 11 90 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - c - - - ML 122 121 3 124 3 1 10 89 126 -8.118 -0.019 -6.772 -0.938 0.934 -1.759 0.347 D 123 121 3 124 3 0 6 85 122 -6.621 -2.134 -0.392 IL 124 124 3 124 3 1 10 89 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - u - - - ML 125 124 3 127 3 1 9 88 125 -1.936 -0.538 -4.329 -0.272 0.402 -1.156 0.487 D 126 124 3 127 3 0 6 81 118 -5.908 -0.705 -1.435 IL 127 127 3 127 3 1 9 89 127 -0.714 -1.653 -3.785 0.000 0.000 0.000 0.000 [ MATR 35 ] - 111 - C - - MR 128 127 3 130 3 1 9 72 91 -8.364 -0.019 -6.682 -1.766 1.631 -2.590 -1.174 D 129 127 3 130 3 0 4 70 89 -7.479 -2.657 -0.259 IR 130 130 3 130 3 1 8 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 110 - A - - MR 131 130 3 133 3 1 8 71 90 -8.364 -0.019 -6.682 1.723 -2.392 -2.022 -1.936 D 132 130 3 133 3 0 4 69 88 -7.479 -2.483 -0.294 IR 133 133 3 133 3 1 8 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 109 - a - - MR 134 133 3 136 3 1 7 70 89 -8.371 -0.210 -2.919 0.615 0.278 -1.125 -0.327 D 135 133 3 136 3 0 3 68 87 -7.450 -2.627 -0.265 IR 136 136 3 136 3 1 8 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 108 - A - - MR 137 136 3 139 3 1 8 69 88 -8.183 -0.021 -6.501 1.226 -0.827 -1.124 -0.649 D 138 136 3 139 3 0 3 68 86 -8.030 -1.083 -0.932 IR 139 139 3 139 3 1 7 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 107 - A - - MR 140 139 3 142 3 1 8 68 87 -8.389 -0.018 -6.706 1.140 -0.494 -1.195 -0.621 D 141 139 3 142 3 0 2 66 85 -7.378 -1.997 -0.428 IR 142 142 3 142 3 1 7 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 106 - a - - MR 143 142 3 145 3 1 7 67 86 -8.415 -0.018 -6.733 0.602 -0.702 -0.337 0.105 D 144 142 3 145 3 0 2 65 84 -7.257 -2.435 -0.307 IR 145 145 3 145 3 1 6 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 105 - a - - MR 146 145 3 148 3 1 6 66 85 -8.415 -0.018 -6.733 0.890 -1.017 -0.112 -0.459 D 147 145 3 148 3 0 1 64 83 -7.257 -2.435 -0.307 IR 148 148 3 148 3 1 6 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 104 - A - - MR 149 148 3 151 3 1 6 65 84 -2.701 -0.257 -6.733 1.159 -1.503 -0.155 -0.954 D 150 148 3 151 3 0 1 63 82 -7.257 -1.999 -0.428 IR 151 151 3 151 3 1 5 65 84 -2.523 -0.342 -4.762 0.000 0.000 0.000 0.000 [ MATR 43 ] - 102 - g - - MR 152 151 3 154 3 1 5 64 83 -8.435 -0.018 -6.753 -0.422 -1.196 0.865 -0.006 D 153 151 3 154 3 0 1 62 81 -7.160 -2.337 -0.331 IR 154 154 3 154 3 1 4 65 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 101 - u - - MR 155 154 3 157 3 1 4 63 82 -8.435 -0.100 -3.968 -0.260 -0.131 -0.440 0.599 D 156 154 3 157 3 0 1 61 80 -7.160 -0.844 -1.198 IR 157 157 3 157 3 1 4 64 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 100 - a - - MR 158 157 3 160 5 1 5 62 81 -7.189 -0.037 -7.004 -7.216 -8.108 0.743 -0.833 -1.073 0.367 D 159 157 3 160 5 0 0 60 79 -5.754 -0.583 -2.887 -4.811 -2.806 IR 160 160 3 160 5 1 2 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 45 99 C G - - MP 161 160 3 165 6 2 6 61 80 -6.975 -9.127 -0.029 -7.904 -8.184 -8.579 -4.018 -3.983 -3.885 -0.254 -2.804 -4.437 3.359 -2.114 -3.903 -0.054 -4.273 -1.992 0.851 -4.161 -0.073 -2.780 ML 162 160 3 165 6 1 1 59 78 -6.340 -6.687 -1.401 -0.919 -6.536 -4.066 0.252 -0.084 -0.396 0.145 MR 163 160 3 165 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 3 165 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 165 165 5 165 6 1 2 60 79 -2.670 -2.933 -0.851 -3.288 -5.364 -5.024 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 2 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 47 98 a u - - MP 167 166 6 171 6 2 6 59 78 -9.179 -9.118 -0.056 -5.123 -8.175 -8.570 -1.442 -2.356 -2.650 2.141 -2.502 -3.479 1.767 -2.860 -2.707 1.469 -3.231 -0.466 1.078 -2.784 -0.410 -1.745 ML 168 166 6 171 6 1 1 57 76 -6.455 -6.801 -1.515 -0.825 -6.651 -4.180 0.726 -0.631 -0.343 -0.133 MR 169 166 6 171 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 6 171 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 2 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 2 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 48 97 g c - - MP 173 172 6 177 6 2 5 57 76 -6.708 -4.019 -0.123 -7.859 -8.139 -8.534 -2.194 -1.918 -0.464 1.437 -2.298 -3.158 1.711 -2.636 -2.423 1.867 -2.956 -0.280 1.139 -2.445 -0.311 -1.497 ML 174 172 6 177 6 1 1 55 74 -6.830 -7.176 -0.843 -1.408 -7.026 -4.555 0.005 0.305 -0.526 0.093 MR 175 172 6 177 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 176 172 6 177 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 177 177 5 177 6 1 2 56 75 -2.688 -2.307 -0.869 -4.606 -5.383 -5.043 0.000 0.000 0.000 0.000 IR 178 178 6 178 5 1 2 56 75 -2.907 -0.333 -6.418 -4.586 -5.692 0.000 0.000 0.000 0.000 [ MATP 49 ] 50 95 c g - - MP 179 178 6 183 6 2 5 55 73 -9.188 -9.127 -0.020 -7.904 -8.184 -8.579 -2.236 -2.292 -1.542 1.065 -2.024 -2.956 2.354 -2.590 -2.437 1.153 -2.988 -0.021 1.347 -2.529 -0.136 -1.524 ML 180 178 6 183 6 1 1 53 72 -6.340 -6.687 -1.186 -1.095 -6.536 -4.066 0.252 -0.084 -0.396 0.145 MR 181 178 6 183 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 6 183 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 51 94 A U - - MP 185 184 6 189 6 2 5 53 71 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -2.344 -2.605 -3.435 3.037 -3.844 -4.577 0.211 -3.667 -3.424 1.385 -3.961 0.725 -0.035 -3.756 -1.617 -2.389 ML 186 184 6 189 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 6 189 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 6 189 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 52 93 c g - - MP 191 190 6 195 6 2 4 51 69 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -3.054 -2.958 -3.117 0.639 -2.509 -3.887 2.049 -3.056 -3.130 1.494 -3.630 -0.990 1.700 -3.277 1.305 -2.074 ML 192 190 6 195 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 6 195 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 6 195 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 53 92 c g - - MP 197 196 6 201 6 2 3 49 67 -9.195 -9.134 -0.029 -7.910 -8.190 -6.826 -3.271 -3.106 -3.305 0.560 -2.606 -4.054 2.782 -2.089 -3.303 1.439 -3.785 -1.052 1.249 -3.480 -0.287 -2.213 ML 198 196 6 201 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 45 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 54 91 a u - - MP 203 202 6 207 6 2 4 47 65 -3.089 -9.125 -0.200 -7.901 -8.181 -8.576 -3.313 -2.774 -3.357 2.673 -3.112 -4.258 1.128 -3.405 -3.354 1.283 -3.848 -0.514 1.422 -3.602 -0.827 -2.291 ML 204 202 6 207 6 1 1 45 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 206 202 6 207 6 0 0 43 61 -9.202 -7.900 -2.494 -4.379 -4.397 -0.472 IL 207 207 5 207 6 1 1 46 65 -3.393 -0.746 -1.928 -5.665 -6.442 -6.102 0.000 0.000 0.000 0.000 IR 208 208 6 208 5 1 1 45 64 -3.198 -0.266 -6.709 -4.877 -5.983 0.000 0.000 0.000 0.000 [ MATP 54 ] 57 89 c g - - MP 209 208 6 213 6 2 4 44 63 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -2.069 -2.654 -2.759 0.853 -2.316 -3.145 2.248 -2.812 -2.775 0.965 -3.311 -0.845 2.115 -2.911 -0.101 -1.795 ML 210 208 6 213 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 211 208 6 213 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 212 208 6 213 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 213 213 5 213 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 214 214 6 214 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 58 88 c g - - MP 215 214 6 219 6 2 3 42 61 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -2.961 -2.893 -3.052 0.799 -1.851 -3.862 2.270 -2.996 -3.048 1.395 -3.570 -0.920 1.983 -3.207 -0.141 -1.995 ML 216 214 6 219 6 1 1 41 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 217 214 6 219 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 218 214 6 219 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 219 219 5 219 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 220 220 6 220 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 59 87 c g - - MP 221 220 6 225 4 2 2 40 59 -2.639 -3.036 -0.939 -2.352 -2.543 -2.617 -2.668 1.379 0.341 -3.474 2.177 -2.749 -2.696 0.838 -3.229 -0.904 1.369 -2.827 0.351 -1.747 ML 222 220 6 225 4 1 1 39 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 223 220 6 225 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 224 220 6 225 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 225 225 5 225 4 1 1 39 58 -2.519 -3.202 -0.520 -5.688 0.000 0.000 0.000 0.000 IR 226 226 6 226 3 1 1 39 58 -1.810 -1.166 -1.894 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - u - - - ML 227 226 6 229 3 1 1 37 56 -7.703 -0.025 -6.357 0.056 0.150 -0.973 0.424 D 228 226 6 229 3 0 0 36 55 -8.150 -0.278 -2.541 IL 229 229 3 229 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - A - - - ML 230 229 3 232 3 1 1 36 55 -8.546 -0.031 -5.774 1.048 -0.932 -0.398 -0.623 D 231 229 3 232 3 0 0 35 54 -5.620 -0.734 -1.403 IL 232 232 3 232 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 85 - G - - MR 233 232 3 235 3 1 1 35 54 -8.532 -0.017 -6.850 -0.058 -1.480 1.133 -1.035 D 234 232 3 235 3 0 0 33 52 -6.517 -1.695 -0.556 IR 235 235 3 235 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 60 ] - 84 - u - - MR 236 235 3 238 3 1 1 34 53 -8.532 -0.017 -6.850 -0.470 -1.023 0.284 0.649 D 237 235 3 238 3 0 0 32 51 -6.517 -1.695 -0.556 IR 238 238 3 238 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 61 ] - 83 - A - - MR 239 238 3 241 3 1 1 33 52 -8.532 -0.017 -6.850 1.521 -1.556 -1.626 -1.102 D 240 238 3 241 3 0 0 31 50 -6.517 -1.695 -0.556 IR 241 241 3 241 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 62 ] - 82 - A - - MR 242 241 3 244 3 1 1 32 51 -8.532 -0.017 -6.850 1.106 -1.099 -1.001 -0.182 D 243 241 3 244 3 0 0 30 49 -6.517 -1.695 -0.556 IR 244 244 3 244 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 63 ] - 81 - a - - MR 245 244 3 247 3 1 1 31 50 -8.532 -0.017 -6.850 0.362 -0.157 -0.061 -0.218 D 246 244 3 247 3 0 0 29 48 -6.517 -1.346 -0.747 IR 247 247 3 247 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 64 ] - 80 - A - - MR 248 247 3 250 3 1 1 30 49 -5.723 -0.040 -6.864 1.514 -1.481 -1.492 -1.216 D 249 247 3 250 3 0 0 28 47 -6.390 -1.568 -0.620 IR 250 250 3 250 3 1 1 31 50 -1.792 -0.719 -3.268 0.000 0.000 0.000 0.000 [ MATR 65 ] - 77 - g - - MR 251 250 3 253 3 1 1 29 48 -8.522 -0.036 -5.501 0.428 -0.991 0.442 -0.333 D 252 250 3 253 3 0 0 27 46 -6.597 -1.231 -0.827 IR 253 253 3 253 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 66 ] - 76 - u - - MR 254 253 3 256 5 1 1 28 47 -7.255 -0.035 -7.070 -7.282 -8.174 0.103 -0.482 -0.130 0.375 D 255 253 3 256 5 0 0 27 45 -5.450 -0.648 -3.076 -4.507 -2.501 IR 256 256 3 256 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 67 ] 63 75 G C - - MP 257 256 3 261 6 2 2 27 46 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -4.073 -2.382 -4.067 1.318 -4.771 -4.532 -0.150 -4.483 -4.028 3.343 -4.397 -0.401 -0.434 -3.963 -2.140 -2.983 ML 258 256 3 261 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 259 256 3 261 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 260 256 3 261 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 261 261 5 261 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 262 262 6 262 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 68 ] 64 74 G C - - MP 263 262 6 267 6 2 2 25 44 -9.195 -9.134 -0.020 -7.910 -8.190 -8.585 -4.287 -2.874 -4.306 1.180 -4.985 -4.665 -0.332 -4.671 -4.144 3.431 -4.514 -0.514 -0.637 -4.173 -2.341 -3.196 ML 264 262 6 267 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 265 262 6 267 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 266 262 6 267 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 267 267 5 267 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 268 268 6 268 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 69 ] 65 73 C G - - MP 269 268 6 273 4 2 2 23 42 -7.166 -7.373 -0.046 -5.787 -5.014 -5.015 -4.672 -1.211 -2.706 -5.045 3.683 -4.202 -4.750 -1.023 -4.966 -3.024 0.156 -5.066 -1.075 -3.582 ML 270 268 6 273 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 271 268 6 273 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 272 268 6 273 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 273 273 5 273 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 274 274 6 274 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 66 - A - - - ML 275 274 6 277 3 1 1 20 39 -8.168 -0.018 -6.822 1.794 -2.785 -2.376 -2.369 D 276 274 6 277 3 0 0 19 38 -6.174 -1.687 -0.566 IL 277 277 3 277 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 67 - C - - - ML 278 277 3 280 3 1 1 19 37 -8.168 -0.018 -6.822 -2.242 1.735 -3.073 -1.556 D 279 277 3 280 3 0 0 18 37 -6.174 -1.687 -0.566 IL 280 280 3 280 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 68 - A - - - ML 281 280 3 283 3 1 1 17 36 -8.168 -0.018 -6.822 1.675 -1.994 -1.943 -1.757 D 282 280 3 283 3 0 0 17 36 -6.174 -1.687 -0.566 IL 283 283 3 283 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 69 - G - - - ML 284 283 3 286 3 1 1 16 35 -8.168 -0.018 -6.822 -2.010 -3.292 1.805 -2.679 D 285 283 3 286 3 0 0 16 34 -6.174 -1.687 -0.566 IL 286 286 3 286 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 70 - a - - - ML 287 286 3 289 3 1 1 15 33 -8.168 -0.018 -6.822 0.963 -1.041 -0.958 0.070 D 288 286 3 289 3 0 0 15 33 -6.174 -1.687 -0.566 IL 289 289 3 289 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 71 - u - - - ML 290 289 3 292 3 1 1 13 31 -8.168 -0.018 -6.822 0.040 -0.593 -0.024 0.406 D 291 289 3 292 3 0 0 13 32 -6.174 -1.687 -0.566 IL 292 292 3 292 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 72 - c - - - ML 293 292 3 295 2 1 1 1 1 * 0.000 0.161 0.429 -1.209 0.142 D 294 292 3 295 2 0 0 0 0 * 0.000 IL 295 295 3 295 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 296 295 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Flavi_CRE ACC RF00185 DESC Flavivirus 3' UTR cis-acting replication element (CRE) LENG 96 MAXL 180 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:23:22 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 84 EFFN 5.114136 CKSUM 3881150971 STATS LOCAL MSV -9.1117 0.71863 STATS LOCAL VITERBI -10.6143 0.71863 STATS LOCAL FORWARD -3.5876 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30247 1.42117 1.34431 1.48728 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 0.00000 * 1 4.52043 0.04890 4.56591 3.63279 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 2 1.73172 1.18002 2.16705 0.91321 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 3 1.74639 1.92569 0.61753 1.96222 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 4 1.88486 2.11801 0.52658 1.98590 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03618 3.76094 4.40058 0.84890 0.55841 1.09861 0.40547 5 2.44086 2.54347 0.25252 2.85627 6 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08842 4.40058 2.62616 1.46634 0.26236 1.09861 0.40547 6 0.24059 3.08258 2.27747 2.72648 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02646 4.33862 4.33862 1.46634 0.26236 2.06647 0.13540 7 0.65817 2.07748 1.98474 1.51621 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.27967 1.46573 4.33862 0.10947 2.26633 0.29204 1.37332 8 0.08528 3.81460 3.60909 3.42287 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 9 2.26846 3.56935 0.19391 3.10958 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 10 0.14009 2.98239 3.27018 3.16900 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 11 2.48112 0.60032 1.74490 1.64481 13 C - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 12 2.37594 0.86543 1.66535 1.21377 14 c - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 13 1.17854 2.33693 0.74551 2.11070 15 g - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 14 3.82351 4.66296 0.04401 4.44275 16 G - - > 1.38629 1.38629 1.38629 1.38629 0.21774 4.40058 1.69613 1.46634 0.26236 1.09861 0.40547 15 1.41213 3.01183 0.45334 2.63562 17 G - - - 1.38629 1.38629 1.38629 1.38629 0.36522 1.23391 4.21290 0.17783 1.81454 0.12559 2.13689 16 1.23311 1.80292 1.22021 1.39179 20 g - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 17 2.52138 3.52682 0.15671 3.34377 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 18 1.22878 1.53614 1.13795 1.76219 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.27523 4.40058 1.47695 1.46634 0.26236 1.09861 0.40547 19 2.38576 2.43954 2.63131 0.28929 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.03180 4.15716 4.15716 1.46634 0.26236 0.10208 2.33257 20 2.02978 1.03904 1.47504 1.25151 25 c - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 21 2.09420 1.04077 1.51991 1.18772 26 c - - < 1.38629 1.38629 1.38629 1.38629 0.04844 4.40058 3.35201 1.46634 0.26236 1.09861 0.40547 22 3.43532 2.79413 3.44923 0.13371 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.45135 4.37758 1.04789 1.46634 0.26236 0.53114 0.88657 23 1.60498 2.06952 1.35812 0.87775 28 u - - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99946 3.99946 1.46634 0.26236 0.06916 2.70570 24 3.63001 0.11108 4.17012 2.76202 29 C - - - 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 25 3.30779 3.01926 3.83398 0.11323 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 26 1.99160 2.62923 0.58592 1.44904 31 G - - - 1.38629 1.38629 1.38629 1.38629 0.21774 4.40058 1.69613 1.46634 0.26236 1.09861 0.40547 27 1.98996 0.82491 1.29642 1.88705 32 c - - - 1.38629 1.38629 1.38629 1.38629 0.60256 0.82602 4.21290 0.06631 2.74642 0.12559 2.13689 28 3.55160 3.36964 4.09338 0.08312 34 U - - - 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 29 2.80435 0.36486 3.44633 1.54507 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 30 3.55160 3.36964 4.09338 0.08312 36 U - - - 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 31 1.39890 0.78094 2.14743 1.72387 37 c - - - 1.38629 1.38629 1.38629 1.38629 0.07031 4.40058 2.88905 1.46634 0.26236 1.09861 0.40547 32 2.53091 0.56256 3.16227 1.17656 38 C - - - 1.38629 1.38629 1.38629 1.38629 0.02599 4.35626 4.35626 1.46634 0.26236 1.87697 0.16612 33 1.72597 0.96356 2.42325 1.04459 39 c - - - 1.38629 1.38629 1.38629 1.38629 0.47633 1.00480 4.35626 1.26112 0.33315 0.36544 1.18382 34 3.29025 0.24225 3.13465 2.00710 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.04320 3.50616 4.40058 0.68186 0.70456 1.09861 0.40547 35 0.83732 1.42471 1.79638 1.82850 47 a - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 36 1.30145 1.40491 1.24777 1.63307 48 g - - < 1.38629 1.38629 1.38629 1.38629 0.04713 3.38832 4.40058 0.61541 0.77744 1.09861 0.40547 37 1.74391 0.90826 1.62095 1.49510 50 c - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 38 0.34584 3.43310 1.51960 3.18719 51 A - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 39 2.38272 1.31369 1.56983 0.84213 52 u - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 40 2.54372 0.57915 1.63933 1.79012 53 C - - < 1.38629 1.38629 1.38629 1.38629 0.04320 4.40058 3.50616 1.46634 0.26236 1.09861 0.40547 41 0.52810 2.43217 2.15282 1.57855 54 A - - < 1.38629 1.38629 1.38629 1.38629 0.44610 1.05731 4.38268 0.10516 2.30439 0.59756 0.79884 42 2.02585 1.07081 1.98202 0.94779 57 u - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 43 2.16929 1.05966 1.61553 1.07769 58 c - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 44 1.58464 0.81921 2.14065 1.44130 59 c - - < 1.38629 1.38629 1.38629 1.38629 0.81745 1.63182 1.01371 0.12107 2.17127 1.09861 0.40547 45 1.39333 1.17158 2.24422 1.09105 61 u - - - 1.38629 1.38629 1.38629 1.38629 0.03852 3.96887 3.96887 1.46634 0.26236 0.06544 2.75917 46 0.53619 2.17054 1.70015 2.13493 62 A - - - 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 47 1.74455 3.19215 0.30589 3.04224 63 G - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 48 1.90743 3.45009 0.24425 3.31027 64 G - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 49 4.44226 0.06594 4.34211 3.24324 65 C - - < 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 50 0.05563 4.21278 3.85817 4.00648 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 51 3.97083 0.06781 4.47582 3.34334 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 52 0.11873 3.19569 3.36402 3.31256 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 53 3.63113 4.60923 0.05369 4.14571 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 54 0.60066 2.38472 2.25660 1.36756 70 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 55 1.40805 1.88136 1.32982 1.08331 71 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 56 1.29666 0.94261 2.52090 1.36039 72 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 57 3.41486 4.50163 0.05963 4.27503 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 58 3.54243 0.27558 3.27723 1.74760 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 59 3.29830 0.33795 3.01614 1.60529 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.04320 4.40058 3.50616 1.46634 0.26236 1.09861 0.40547 60 1.34654 1.76926 1.42321 1.11333 76 u - - - 1.38629 1.38629 1.38629 1.38629 0.02530 4.38268 4.38268 1.46634 0.26236 0.59756 0.79884 61 1.08809 2.25870 0.94079 1.78179 77 g - - - 1.38629 1.38629 1.38629 1.38629 0.04761 3.37492 4.40058 0.60824 0.78594 1.09861 0.40547 62 0.21684 2.65782 2.84913 2.70383 80 A - - - 1.38629 1.38629 1.38629 1.38629 0.03836 4.40058 3.67456 1.46634 0.26236 1.09861 0.40547 63 1.13001 1.42744 1.36761 1.70192 81 a - - - 1.38629 1.38629 1.38629 1.38629 0.02518 4.38740 4.38740 1.46634 0.26236 1.40287 0.28222 64 0.49201 2.42092 2.31519 1.60436 82 A - - - 1.38629 1.38629 1.38629 1.38629 0.02518 4.38740 4.38740 1.46634 0.26236 1.40287 0.28222 65 0.21170 2.76884 3.02354 2.53286 83 A - - - 1.38629 1.38629 1.38629 1.38629 0.02518 4.38740 4.38740 1.46634 0.26236 1.40287 0.28222 66 2.03258 2.42665 1.05759 0.83614 84 u - - - 1.38629 1.38629 1.38629 1.38629 0.02518 4.38740 4.38740 1.46634 0.26236 1.40287 0.28222 67 1.55143 2.71558 0.43800 2.56969 85 G - - - 1.38629 1.38629 1.38629 1.38629 0.18040 1.87971 4.38740 0.15563 1.93705 0.67684 0.70972 68 1.29155 2.31135 0.91909 1.48216 87 g - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 69 1.18543 1.73122 0.97574 1.96324 88 g - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 70 1.04835 2.12974 0.96565 1.89791 89 g - - > 1.38629 1.38629 1.38629 1.38629 0.46400 1.07521 3.50616 0.07043 2.68817 1.09861 0.40547 71 1.66994 2.41121 2.25870 0.48200 91 U - - > 1.38629 1.38629 1.38629 1.38629 0.02530 4.38268 4.38268 1.46634 0.26236 0.59756 0.79884 72 2.02839 1.72992 0.54689 2.18564 92 G - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 73 1.48192 1.66474 0.75779 2.16407 93 g - - > 1.38629 1.38629 1.38629 1.38629 0.02485 4.40058 4.40058 1.46634 0.26236 1.09861 0.40547 74 3.11001 2.36474 3.23882 0.19575 94 U - - > 1.38629 1.38629 1.38629 1.38629 0.03836 4.40058 3.67456 1.46634 0.26236 1.09861 0.40547 75 1.70364 1.96666 0.78526 1.50483 95 g - - > 1.38629 1.38629 1.38629 1.38629 0.35942 1.60263 2.29711 0.11922 2.18584 1.40287 0.28222 76 1.87049 1.34043 1.10945 1.36853 97 g - - > 1.38629 1.38629 1.38629 1.38629 0.02765 4.29516 4.29516 1.46634 0.26236 0.51849 0.90490 77 1.88877 1.97124 1.30278 0.82626 98 u - - > 1.38629 1.38629 1.38629 1.38629 0.02565 4.36926 4.36926 1.46634 0.26236 0.81264 0.58642 78 2.50181 3.32538 0.19445 2.83331 99 G - - > 1.38629 1.38629 1.38629 1.38629 0.09878 4.38740 2.50567 1.46634 0.26236 1.40287 0.28222 79 0.76933 2.16646 2.37490 1.11148 100 a - - - 1.38629 1.38629 1.38629 1.38629 0.12940 4.31571 2.22541 1.46634 0.26236 0.38333 1.14441 80 1.71357 1.43598 1.67250 0.93110 101 u - - - 1.38629 1.38629 1.38629 1.38629 0.02765 4.29516 4.29516 1.46634 0.26236 2.41182 0.09393 81 1.96578 2.56795 0.59528 1.46165 102 G - - - 1.38629 1.38629 1.38629 1.38629 0.29144 1.51212 3.43052 0.11942 2.18426 2.41182 0.09393 82 0.44997 2.92612 1.45292 2.59208 104 A - - - 1.38629 1.38629 1.38629 1.38629 0.02818 4.27625 4.27625 1.46634 0.26236 2.52799 0.08318 83 0.67061 2.27900 1.43225 1.91431 105 A - - - 1.38629 1.38629 1.38629 1.38629 0.02818 4.27625 4.27625 1.46634 0.26236 2.52799 0.08318 84 0.91116 1.97660 1.62670 1.33626 106 a - - - 1.38629 1.38629 1.38629 1.38629 0.05487 4.27625 3.23149 1.46634 0.26236 2.52799 0.08318 85 0.44097 1.74315 2.61268 2.22299 107 A - - - 1.38629 1.38629 1.38629 1.38629 0.24283 4.25031 1.60279 1.46634 0.26236 2.66522 0.07212 86 0.37489 2.08642 2.52880 2.21868 108 A - - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04320 4.04320 1.46634 0.26236 0.75295 0.63672 87 0.86847 1.05426 2.50014 1.89790 109 a - - - 1.38629 1.38629 1.38629 1.38629 0.03690 4.23346 3.82923 1.46634 0.26236 2.74360 0.06650 88 0.07731 3.89436 3.56065 3.66437 110 A - - - 1.38629 1.38629 1.38629 1.38629 0.02965 4.22621 4.22621 1.46634 0.26236 2.77515 0.06437 89 3.62319 0.09469 4.16893 3.03291 111 C - - - 1.38629 1.38629 1.38629 1.38629 0.03580 4.22621 3.88429 1.46634 0.26236 1.91051 0.16017 90 0.13520 3.69308 2.64959 3.47756 112 A - - > 1.38629 1.38629 1.38629 1.38629 0.02923 4.24023 4.24023 1.46634 0.26236 2.37108 0.09803 91 1.37313 1.62294 0.90008 1.94609 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.02906 4.24608 4.24608 1.46634 0.26236 2.68559 0.07062 92 1.40484 1.60125 0.90302 1.91321 114 g - - > 1.38629 1.38629 1.38629 1.38629 0.03875 4.24608 3.74270 1.46634 0.26236 2.68559 0.07062 93 0.87238 1.51192 2.28803 1.34672 115 a - - - 1.38629 1.38629 1.38629 1.38629 0.02934 4.23667 4.23667 1.46634 0.26236 2.72924 0.06750 94 1.95312 1.22139 1.39150 1.15630 116 u - - > 1.38629 1.38629 1.38629 1.38629 0.02934 4.23667 4.23667 1.46634 0.26236 2.72924 0.06750 95 3.62764 0.15586 3.42375 2.46328 117 C - - > 1.38629 1.38629 1.38629 1.38629 0.02934 4.23667 4.23667 1.46634 0.26236 2.72924 0.06750 96 1.49313 1.59333 1.55118 1.02141 118 u - - > 1.38629 1.38629 1.38629 1.38629 0.01478 4.22211 * 1.46634 0.26236 0.00000 * //