INFERNAL1/a [1.1.5 | Sep 2023] NAME Flavi_CRE ACC RF00185 DESC Flavivirus 3' UTR cis-acting replication element (CRE) STATES 297 NODES 78 CLEN 96 W 126 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 09:23:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00185/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 84 EFFN 2.494263 CKSUM 3881150971 NULL 0.000 0.000 0.000 0.000 GA 42.00 TC 42.20 NC 40.90 EFP7GF -8.6857 0.71862 ECMLC 0.59893 -8.78666 1.19970 1600000 475086 0.002526 ECMGC 0.40648 -13.53642 -3.10128 1600000 27809 0.014384 ECMLI 0.55727 -5.63058 4.13394 1600000 276934 0.004333 ECMGI 0.46010 -7.37006 1.82266 1600000 27475 0.014559 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 1 1 126 162 -5.491 -15.961 -0.032 IL 1 1 2 1 3 11 43 137 181 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 10 42 128 164 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 4 48 9 41 126 162 [ BEGL 2 ] - - - - - - S 4 3 1 5 4 0 0 28 47 -0.041 -6.946 -6.353 -6.993 [ MATP 3 ] 1 16 C G - - MP 5 4 1 9 6 2 2 28 47 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -5.014 -4.927 -3.642 -1.165 -3.592 -5.230 3.708 -4.425 -4.847 -0.940 -5.090 -2.874 -0.050 -5.135 -1.361 -3.703 ML 6 4 1 9 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 7 4 1 9 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 8 4 1 9 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 9 9 5 9 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 10 10 6 10 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 15 c g - - MP 11 10 6 15 6 2 2 26 45 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -2.416 -2.514 -0.257 0.758 -2.193 -3.358 2.078 -2.674 -2.588 0.841 -3.125 -0.868 1.976 -2.707 0.477 -1.664 ML 12 10 6 15 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 13 10 6 15 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 14 10 6 15 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 15 15 5 15 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 16 16 6 16 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 14 g c - - MP 17 16 6 21 6 2 2 24 43 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -2.980 -2.031 -3.016 1.253 -3.171 -3.730 1.271 -3.361 -3.179 2.544 -3.606 0.700 0.722 -3.028 -0.395 -2.052 ML 18 16 6 21 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 19 16 6 21 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 20 16 6 21 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 21 21 5 21 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 22 22 6 22 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 13 g c - - MP 23 22 6 27 4 2 2 22 41 -6.410 -7.370 -0.053 -5.784 -3.200 -2.456 -3.192 1.172 -3.323 -3.892 1.163 -3.522 -3.382 2.824 -3.066 -0.261 0.668 -3.191 -0.312 -2.197 ML 24 22 6 27 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 25 22 6 27 4 1 1 23 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 26 22 6 27 4 0 0 22 40 -4.568 -4.250 -2.265 -0.520 IL 27 27 5 27 4 1 1 24 43 -1.720 -2.404 -1.078 -4.889 0.000 0.000 0.000 0.000 IR 28 28 6 28 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - G - - - ML 29 28 6 31 3 1 1 19 38 -8.165 -0.071 -4.480 -0.833 -1.397 1.402 -1.265 D 30 28 6 31 3 0 0 18 37 -6.174 -1.687 -0.566 IL 31 31 3 31 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - A - - - ML 32 31 3 34 3 1 1 18 36 -8.112 -0.019 -6.766 1.483 -1.774 -1.035 -1.237 D 33 31 3 34 3 0 0 17 36 -6.641 -2.154 -0.386 IL 34 34 3 34 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - a - - - ML 35 34 3 37 3 1 1 16 35 -2.597 -0.277 -6.766 0.895 -0.798 -0.661 -0.101 D 36 34 3 37 3 0 0 15 33 -6.641 -0.997 -1.033 IL 37 37 3 37 3 1 1 17 35 -1.943 -0.515 -4.643 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 38 37 3 40 3 1 1 15 33 -8.165 -0.018 -6.819 1.733 -2.439 -2.148 -1.911 D 39 37 3 40 3 0 0 15 33 -6.174 -1.687 -0.566 IL 40 40 3 40 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 41 40 3 43 3 1 1 13 31 -8.165 -0.018 -6.819 -0.992 -2.426 1.595 -1.782 D 42 40 3 43 3 0 0 13 32 -6.174 -1.687 -0.566 IL 43 43 3 43 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 44 43 3 46 2 1 1 1 1 * 0.000 1.636 -1.802 -1.845 -1.610 D 45 43 3 46 2 0 0 0 0 * 0.000 IL 46 46 3 46 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 13 ] - - - - - - E 47 46 3 -1 0 0 0 0 0 [ BEGR 14 ] - - - - - - S 48 3 1 49 3 1 28 112 148 -8.165 -0.265 -2.604 IL 49 49 2 49 3 2 30 114 150 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - G - - - ML 50 49 2 52 5 3 29 112 148 -2.482 -0.368 -4.855 -7.083 -7.975 0.114 -1.583 1.056 -0.987 D 51 49 2 52 5 0 26 110 147 -5.908 -0.602 -2.759 -3.545 -3.457 IL 52 52 3 52 5 2 29 112 148 -2.761 -0.525 -2.960 -6.506 -5.780 0.000 0.000 0.000 0.000 [ MATP 16 ] 20 118 g c - - MP 53 52 3 57 6 4 29 111 147 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -1.803 -1.912 -2.147 1.680 -2.332 -3.156 1.340 -2.651 -2.427 1.733 -2.953 0.483 1.409 -2.447 -0.345 -1.500 ML 54 52 3 57 6 1 26 109 145 -7.017 -7.363 -2.077 -0.504 -7.213 -4.742 0.632 -0.852 0.094 -0.271 MR 55 52 3 57 6 1 26 109 145 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 3 57 6 0 22 106 143 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 27 110 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 27 110 146 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 21 117 G C - - MP 59 58 6 63 6 3 27 109 145 -9.120 -9.059 -0.021 -7.835 -8.115 -8.510 -4.362 -1.804 -4.408 0.470 -5.015 -4.529 -0.413 -4.803 -4.162 3.543 -4.505 -0.603 -0.710 -4.133 -2.410 -3.339 ML 60 58 6 63 6 1 25 107 144 -7.017 -7.363 -2.077 -0.504 -7.213 -4.742 -0.210 -1.149 1.005 -0.562 MR 61 58 6 63 6 1 24 107 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 22 105 141 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 26 108 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 26 108 144 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 22 116 g c - - MP 65 64 6 69 4 2 25 107 143 -6.980 -7.187 -0.282 -2.618 -2.083 -2.331 -2.780 1.781 -2.706 -3.576 1.663 -3.020 -2.873 2.087 -3.367 -0.311 1.037 -2.868 -0.516 -1.836 ML 66 64 6 69 4 1 24 106 142 -4.364 -4.547 -0.715 -1.740 0.573 -0.433 -0.307 -0.055 MR 67 64 6 69 4 1 23 106 142 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 68 64 6 69 4 0 22 105 141 -4.568 -4.250 -2.265 -0.520 IL 69 69 5 69 4 1 25 107 144 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 70 70 6 70 3 1 25 107 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - U - - - ML 71 70 6 73 3 1 23 105 141 -8.272 -0.102 -3.947 -0.768 -0.958 -1.266 1.312 D 72 70 6 73 3 0 21 104 140 -3.620 -0.674 -1.776 IL 73 73 3 73 3 1 23 105 142 -2.043 -0.672 -2.948 0.000 0.000 0.000 0.000 [ MATR 20 ] - 115 - a - - MR 74 73 3 76 5 1 23 104 140 -7.119 -0.038 -6.935 -7.147 -8.038 0.585 -0.230 -0.999 0.198 D 75 73 3 76 5 0 19 102 138 -5.994 -1.264 -1.263 -5.051 -3.045 IR 76 76 3 76 5 1 22 104 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 25 114 c g - - MP 77 76 3 81 6 2 22 103 139 -9.125 -9.064 -0.021 -7.840 -8.120 -8.515 -2.807 -2.707 -2.411 0.844 -2.206 -3.705 2.306 -2.916 -2.922 1.571 -3.441 -0.762 1.716 -3.042 -0.168 -1.886 ML 78 76 3 81 6 1 20 101 137 -6.977 -7.323 -2.037 -0.521 -7.173 -4.702 0.036 -0.141 -0.102 0.184 MR 79 76 3 81 6 1 19 101 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 3 81 6 0 16 98 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 21 102 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 21 102 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 26 113 c g - - MP 83 82 6 87 6 2 20 101 137 -9.125 -9.064 -0.024 -7.840 -8.120 -7.680 -2.509 -2.556 -2.633 0.820 -0.174 -3.442 2.095 -2.713 -2.661 1.410 -3.194 -0.808 1.451 -2.787 0.715 -1.702 ML 84 82 6 87 6 1 19 99 136 -6.977 -7.323 -2.037 -0.595 -7.173 -3.775 0.010 -0.036 -0.322 0.284 MR 85 82 6 87 6 1 18 99 136 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 6 87 6 0 16 97 134 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 19 100 137 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 19 100 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 27 112 U A - - MP 89 88 6 93 4 2 18 99 135 -6.984 -7.191 -0.554 -1.718 -2.791 -3.559 -3.675 0.006 -3.022 -4.419 1.212 -3.589 -3.686 0.276 -4.175 -1.614 3.259 -3.859 -0.652 -2.580 ML 90 88 6 93 4 1 18 98 135 -4.289 -4.472 -0.431 -2.626 -0.266 -0.544 -0.895 0.960 MR 91 88 6 93 4 1 17 98 134 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 92 88 6 93 4 0 16 97 133 -4.709 -4.390 -1.828 -0.661 IL 93 93 5 93 4 1 18 100 136 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 94 94 6 94 3 1 18 99 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - u - - - ML 95 94 6 97 3 1 17 97 134 -7.747 -0.024 -6.401 -0.116 -0.762 0.070 0.524 D 96 94 6 97 3 0 15 96 132 -8.050 -0.300 -2.442 IL 97 97 3 97 3 1 17 98 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - C - - - ML 98 97 3 100 3 1 16 96 133 -8.165 -0.018 -6.819 -1.903 1.637 -2.740 -1.081 D 99 97 3 100 3 0 13 94 131 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 16 97 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - U - - - ML 101 100 3 103 3 1 15 95 132 -8.165 -0.018 -6.819 -1.679 -1.538 -2.424 1.659 D 102 100 3 103 3 0 12 93 130 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 15 96 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - g - - - ML 104 103 3 106 3 1 14 94 131 -8.165 -0.265 -2.604 -0.445 -1.269 0.915 -0.051 D 105 103 3 106 3 0 12 92 129 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 15 95 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - c - - - ML 107 106 3 109 3 1 14 93 130 -1.660 -0.571 -6.575 -0.363 0.500 -0.032 -0.268 D 108 106 3 109 3 0 11 91 128 -7.582 -0.434 -1.974 IL 109 109 3 109 3 1 14 93 130 -2.210 -0.414 -4.910 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - U - - - ML 110 109 3 112 3 1 13 92 128 -8.165 -0.018 -6.819 -1.864 -1.795 -2.614 1.711 D 111 109 3 112 3 0 9 90 126 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 13 93 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - C - - - ML 113 112 3 115 3 1 12 91 127 -8.165 -0.018 -6.819 -1.190 1.229 -2.031 -0.040 D 114 112 3 115 3 0 8 89 125 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 12 92 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - U - - - ML 116 115 3 118 3 1 11 90 126 -8.165 -0.018 -6.819 -1.864 -1.795 -2.614 1.711 D 117 115 3 118 3 0 7 88 124 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 11 91 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - c - - - ML 119 118 3 121 3 1 10 89 125 -8.165 -0.074 -4.436 0.032 0.656 -0.914 -0.198 D 120 118 3 121 3 0 7 86 123 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 10 90 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - c - - - ML 122 121 3 124 3 1 10 88 124 -8.110 -0.019 -6.764 -0.929 0.928 -1.748 0.350 D 123 121 3 124 3 0 6 84 121 -6.656 -2.169 -0.381 IL 124 124 3 124 3 1 10 89 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - u - - - ML 125 124 3 127 3 1 9 87 123 -2.008 -0.509 -4.366 -0.251 0.355 -1.122 0.507 D 126 124 3 127 3 0 6 80 117 -5.932 -0.689 -1.461 IL 127 127 3 127 3 1 8 89 125 -0.730 -1.619 -3.809 0.000 0.000 0.000 0.000 [ MATR 35 ] - 111 - C - - MR 128 127 3 130 3 1 9 72 91 -8.371 -0.018 -6.689 -1.785 1.636 -2.610 -1.189 D 129 127 3 130 3 0 4 70 89 -7.435 -2.613 -0.267 IR 130 130 3 130 3 1 8 73 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 110 - A - - MR 131 130 3 133 3 1 8 71 90 -8.371 -0.018 -6.689 1.727 -2.407 -2.036 -1.953 D 132 130 3 133 3 0 4 69 88 -7.435 -2.438 -0.305 IR 133 133 3 133 3 1 8 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 109 - a - - MR 134 133 3 136 3 1 7 70 89 -8.379 -0.242 -2.726 0.668 0.219 -1.122 -0.343 D 135 133 3 136 3 0 3 68 87 -7.404 -2.582 -0.274 IR 136 136 3 136 3 1 8 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 108 - A - - MR 137 136 3 139 3 1 8 69 88 -8.159 -0.021 -6.476 1.216 -0.824 -1.104 -0.629 D 138 136 3 139 3 0 3 68 86 -8.077 -0.975 -1.036 IR 139 139 3 139 3 1 7 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 107 - A - - MR 140 139 3 142 3 1 8 68 87 -8.396 -0.018 -6.714 1.076 -0.373 -1.173 -0.566 D 141 139 3 142 3 0 2 66 85 -7.331 -1.910 -0.458 IR 142 142 3 142 3 1 6 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 106 - a - - MR 143 142 3 145 3 1 7 67 86 -8.425 -0.018 -6.742 0.581 -0.680 -0.404 0.169 D 144 142 3 145 3 0 1 65 84 -7.194 -2.372 -0.322 IR 145 145 3 145 3 1 6 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 105 - a - - MR 146 145 3 148 3 1 6 66 85 -8.425 -0.018 -6.742 0.888 -1.005 -0.125 -0.447 D 147 145 3 148 3 0 1 64 83 -7.194 -2.372 -0.322 IR 148 148 3 148 3 1 5 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 104 - A - - MR 149 148 3 151 3 1 5 65 84 -2.731 -0.252 -6.742 1.173 -1.518 -0.176 -0.971 D 150 148 3 151 3 0 1 63 82 -7.194 -1.901 -0.463 IR 151 151 3 151 3 1 5 65 84 -2.516 -0.343 -4.755 0.000 0.000 0.000 0.000 [ MATR 43 ] - 102 - g - - MR 152 151 3 154 3 1 5 64 83 -8.446 -0.018 -6.764 -0.434 -1.211 0.880 -0.019 D 153 151 3 154 3 0 1 62 81 -7.082 -2.260 -0.351 IR 154 154 3 154 3 1 4 64 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 101 - u - - MR 155 154 3 157 3 1 4 63 82 -8.446 -0.099 -3.974 -0.305 -0.136 -0.484 0.647 D 156 154 3 157 3 0 0 61 80 -7.082 -0.934 -1.092 IR 157 157 3 157 3 1 4 64 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 100 - a - - MR 158 157 3 160 5 1 5 62 81 -7.183 -0.037 -6.998 -7.210 -8.102 0.712 -0.821 -1.068 0.400 D 159 157 3 160 5 0 0 60 79 -5.765 -0.591 -2.831 -4.822 -2.816 IR 160 160 3 160 5 1 2 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 45 99 C G - - MP 161 160 3 165 6 2 6 61 80 -7.429 -9.125 -0.026 -7.901 -8.181 -8.576 -4.024 -3.987 -3.887 -0.255 -2.801 -4.437 3.358 -2.186 -3.906 -0.053 -4.274 -1.994 0.854 -4.164 -0.052 -2.781 ML 162 160 3 165 6 1 1 59 78 -6.355 -6.701 -1.415 -0.906 -6.551 -4.080 0.235 -0.050 -0.418 0.148 MR 163 160 3 165 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 3 165 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 165 165 5 165 6 1 2 60 79 -2.639 -2.902 -0.820 -3.589 -5.333 -4.994 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 2 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 47 98 a u - - MP 167 166 6 171 6 2 5 59 78 -9.180 -9.119 -0.052 -5.287 -8.175 -8.570 -1.495 -2.368 -2.675 2.179 -2.531 -3.506 1.739 -2.885 -2.733 1.481 -3.255 -0.461 1.058 -2.810 -0.433 -1.766 ML 168 166 6 171 6 1 1 57 76 -6.430 -6.776 -1.490 -0.844 -6.626 -4.155 0.698 -0.611 -0.319 -0.118 MR 169 166 6 171 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 6 171 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 2 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 2 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 48 97 g c - - MP 173 172 6 177 6 2 5 57 76 -7.142 -4.164 -0.110 -7.864 -8.144 -8.539 -2.219 -1.905 -0.561 1.439 -2.331 -3.176 1.689 -2.663 -2.448 1.929 -2.979 -0.267 1.115 -2.463 -0.338 -1.517 ML 174 172 6 177 6 1 1 55 74 -6.768 -7.114 -0.914 -1.320 -6.964 -4.494 0.049 0.208 -0.444 0.105 MR 175 172 6 177 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 176 172 6 177 6 0 0 53 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 177 177 5 177 6 1 1 56 75 -2.655 -2.448 -0.836 -4.573 -5.349 -5.009 0.000 0.000 0.000 0.000 IR 178 178 6 178 5 1 2 56 75 -2.855 -0.346 -6.367 -4.534 -5.640 0.000 0.000 0.000 0.000 [ MATP 49 ] 50 95 c g - - MP 179 178 6 183 6 2 5 54 73 -9.185 -9.125 -0.020 -7.901 -8.181 -8.576 -2.184 -2.252 -1.467 1.056 -1.983 -2.881 2.333 -2.555 -2.391 1.147 -2.943 0.010 1.344 -2.480 -0.127 -1.488 ML 180 178 6 183 6 1 1 53 72 -6.355 -6.701 -1.168 -1.110 -6.551 -4.080 0.235 -0.050 -0.418 0.148 MR 181 178 6 183 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 6 183 6 0 0 51 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 51 94 A U - - MP 185 184 6 189 6 2 5 52 71 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -2.253 -2.626 -3.427 3.063 -3.819 -4.559 0.216 -3.660 -3.426 1.360 -3.964 0.609 -0.029 -3.743 -1.605 -2.393 ML 186 184 6 189 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 6 189 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 6 189 6 0 0 49 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 52 93 c g - - MP 191 190 6 195 6 2 4 50 69 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -3.065 -2.972 -3.125 0.623 -2.508 -3.890 2.031 -3.059 -3.138 1.466 -3.636 -1.007 1.690 -3.287 1.394 -2.082 ML 192 190 6 195 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 6 195 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 6 195 6 0 0 47 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 53 92 c g - - MP 197 196 6 201 6 2 3 48 67 -9.193 -9.132 -0.026 -7.909 -8.189 -7.228 -3.243 -3.086 -3.282 0.570 -2.594 -4.034 2.773 -1.993 -3.281 1.430 -3.764 -1.043 1.255 -3.456 -0.281 -2.196 ML 198 196 6 201 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 54 91 a u - - MP 203 202 6 207 6 2 4 46 65 -3.135 -9.127 -0.194 -7.903 -8.183 -8.578 -3.323 -2.778 -3.366 2.687 -3.124 -4.270 1.116 -3.414 -3.362 1.279 -3.856 -0.514 1.407 -3.613 -0.839 -2.299 ML 204 202 6 207 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 206 202 6 207 6 0 0 42 61 -9.151 -7.849 -2.757 -4.328 -4.345 -0.421 IL 207 207 5 207 6 1 1 46 65 -3.540 -0.745 -1.887 -5.624 -6.401 -6.061 0.000 0.000 0.000 0.000 IR 208 208 6 208 5 1 1 45 64 -3.179 -0.270 -6.690 -4.858 -5.964 0.000 0.000 0.000 0.000 [ MATP 54 ] 57 89 c g - - MP 209 208 6 213 6 2 4 44 63 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -1.979 -2.599 -2.700 0.885 -2.288 -3.079 2.222 -2.774 -2.719 0.982 -3.259 -0.814 2.096 -2.850 -0.097 -1.751 ML 210 208 6 213 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 211 208 6 213 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 212 208 6 213 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 213 213 5 213 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 214 214 6 214 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 58 88 c g - - MP 215 214 6 219 6 2 3 42 61 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -3.031 -2.945 -3.111 0.752 -2.034 -3.912 2.261 -3.033 -3.105 1.398 -3.622 -0.948 2.043 -3.268 -0.146 -2.040 ML 216 214 6 219 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 217 214 6 219 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 218 214 6 219 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 219 219 5 219 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 220 220 6 220 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 59 87 c g - - MP 221 220 6 225 4 2 2 40 59 -2.704 -3.056 -0.886 -2.433 -2.546 -2.619 -2.671 1.357 0.272 -3.478 2.198 -2.750 -2.698 0.838 -3.232 -0.904 1.375 -2.830 0.376 -1.748 ML 222 220 6 225 4 1 1 39 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 223 220 6 225 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 224 220 6 225 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 225 225 5 225 4 1 1 39 58 -2.488 -3.172 -0.533 -5.657 0.000 0.000 0.000 0.000 IR 226 226 6 226 3 1 1 39 58 -1.804 -1.160 -1.909 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - u - - - ML 227 226 6 229 3 1 1 37 56 -7.723 -0.024 -6.377 -0.001 0.244 -1.008 0.399 D 228 226 6 229 3 0 0 36 55 -8.101 -0.289 -2.492 IL 229 229 3 229 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - A - - - ML 230 229 3 232 3 1 1 36 55 -8.543 -0.033 -5.649 1.052 -0.940 -0.407 -0.619 D 231 229 3 232 3 0 0 35 54 -5.620 -0.734 -1.403 IL 232 232 3 232 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 85 - G - - MR 233 232 3 235 3 1 1 35 54 -8.526 -0.017 -6.844 -0.058 -1.448 1.122 -1.013 D 234 232 3 235 3 0 0 33 52 -6.537 -1.715 -0.547 IR 235 235 3 235 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 60 ] - 84 - u - - MR 236 235 3 238 3 1 1 34 53 -8.526 -0.017 -6.844 -0.469 -1.011 0.227 0.688 D 237 235 3 238 3 0 0 32 51 -6.537 -1.715 -0.547 IR 238 238 3 238 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 61 ] - 83 - A - - MR 239 238 3 241 3 1 1 33 52 -8.526 -0.017 -6.844 1.545 -1.660 -1.668 -1.151 D 240 238 3 241 3 0 0 31 50 -6.537 -1.715 -0.547 IR 241 241 3 241 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 62 ] - 82 - A - - MR 242 241 3 244 3 1 1 32 51 -8.526 -0.017 -6.844 1.095 -1.085 -0.966 -0.182 D 243 241 3 244 3 0 0 30 49 -6.537 -1.715 -0.547 IR 244 244 3 244 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 63 ] - 81 - a - - MR 245 244 3 247 3 1 1 31 50 -8.526 -0.017 -6.844 0.408 -0.235 -0.053 -0.218 D 246 244 3 247 3 0 0 29 48 -6.537 -1.316 -0.767 IR 247 247 3 247 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 64 ] - 80 - A - - MR 248 247 3 250 3 1 1 30 49 -6.528 -0.028 -6.860 1.487 -1.410 -1.438 -1.145 D 249 247 3 250 3 0 0 28 47 -6.390 -1.568 -0.620 IR 250 250 3 250 3 1 1 31 50 -1.853 -0.639 -3.623 0.000 0.000 0.000 0.000 [ MATR 65 ] - 77 - g - - MR 251 250 3 253 3 1 1 29 48 -8.531 -0.029 -5.848 0.411 -0.962 0.431 -0.305 D 252 250 3 253 3 0 0 27 46 -6.498 -1.377 -0.727 IR 253 253 3 253 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 66 ] - 76 - u - - MR 254 253 3 256 5 1 1 28 47 -7.258 -0.035 -7.073 -7.286 -8.177 0.158 -0.469 -0.138 0.326 D 255 253 3 256 5 0 0 27 45 -5.417 -0.668 -3.043 -4.474 -2.468 IR 256 256 3 256 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 67 ] 63 75 G C - - MP 257 256 3 261 6 2 2 27 46 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -4.060 -2.333 -4.053 1.313 -4.755 -4.520 -0.138 -4.472 -4.020 3.340 -4.389 -0.396 -0.422 -3.948 -2.127 -2.972 ML 258 256 3 261 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 259 256 3 261 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 260 256 3 261 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 261 261 5 261 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 262 262 6 262 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 68 ] 64 74 G C - - MP 263 262 6 267 6 2 2 25 44 -9.193 -9.132 -0.020 -7.909 -8.189 -8.584 -4.274 -2.867 -4.292 1.195 -4.968 -4.660 -0.318 -4.656 -4.135 3.425 -4.506 -0.507 -0.623 -4.163 -2.326 -3.182 ML 264 262 6 267 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 265 262 6 267 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 266 262 6 267 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 267 267 5 267 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 268 268 6 268 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 69 ] 65 73 C G - - MP 269 268 6 273 4 2 2 23 42 -7.163 -7.370 -0.046 -5.784 -5.002 -5.002 -4.669 -1.201 -2.636 -5.048 3.682 -4.207 -4.746 -1.014 -4.965 -3.012 0.154 -5.059 -1.083 -3.580 ML 270 268 6 273 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 271 268 6 273 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 272 268 6 273 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 273 273 5 273 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 274 274 6 274 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 66 - A - - - ML 275 274 6 277 3 1 1 20 39 -8.165 -0.018 -6.819 1.793 -2.778 -2.370 -2.362 D 276 274 6 277 3 0 0 19 38 -6.174 -1.687 -0.566 IL 277 277 3 277 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 67 - C - - - ML 278 277 3 280 3 1 1 19 37 -8.165 -0.018 -6.819 -2.234 1.734 -3.065 -1.549 D 279 277 3 280 3 0 0 18 37 -6.174 -1.687 -0.566 IL 280 280 3 280 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 68 - A - - - ML 281 280 3 283 3 1 1 17 36 -8.165 -0.018 -6.819 1.707 -2.173 -2.032 -1.891 D 282 280 3 283 3 0 0 17 36 -6.174 -1.687 -0.566 IL 283 283 3 283 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 69 - G - - - ML 284 283 3 286 3 1 1 16 35 -8.165 -0.018 -6.819 -2.003 -3.284 1.804 -2.671 D 285 283 3 286 3 0 0 16 34 -6.174 -1.687 -0.566 IL 286 286 3 286 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 70 - a - - - ML 287 286 3 289 3 1 1 15 33 -8.165 -0.018 -6.819 0.965 -1.042 -0.943 0.058 D 288 286 3 289 3 0 0 15 33 -6.174 -1.687 -0.566 IL 289 289 3 289 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 71 - u - - - ML 290 289 3 292 3 1 1 13 31 -8.165 -0.018 -6.819 0.093 -0.591 -0.036 0.372 D 291 289 3 292 3 0 0 13 32 -6.174 -1.687 -0.566 IL 292 292 3 292 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 72 - c - - - ML 293 292 3 295 2 1 1 1 1 * 0.000 0.119 0.471 -1.227 0.138 D 294 292 3 295 2 0 0 0 0 * 0.000 IL 295 295 3 295 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 296 295 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Flavi_CRE ACC RF00185 DESC Flavivirus 3' UTR cis-acting replication element (CRE) LENG 96 MAXL 179 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 09:23:44 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00185/CM NSEQ 84 EFFN 5.088501 CKSUM 3881150971 STATS LOCAL MSV -8.9683 0.71862 STATS LOCAL VITERBI -10.6009 0.71862 STATS LOCAL FORWARD -3.5932 0.71862 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30149 1.42250 1.34661 1.48438 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 0.00000 * 1 4.51175 0.04815 4.57715 3.65942 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 2 1.73644 1.20384 2.16283 0.89449 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 3 1.77796 1.93882 0.60259 1.96787 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 4 1.88690 2.10378 0.52995 1.98173 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03080 4.01618 4.39743 1.05762 0.42661 1.09861 0.40547 5 2.42550 2.53912 0.25561 2.84417 6 G - - _ 1.38629 1.38629 1.38629 1.38629 0.07303 4.39743 2.84529 1.46634 0.26236 1.09861 0.40547 6 0.23699 3.09774 2.28855 2.74206 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02614 4.35054 4.35054 1.46634 0.26236 1.90532 0.16108 7 0.66253 2.07092 1.94570 1.53481 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.26632 1.51001 4.35054 0.11296 2.23671 0.35318 1.21218 8 0.08762 3.78973 3.59102 3.38967 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 9 2.42794 3.65690 0.16957 3.17142 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 10 0.13923 2.99333 3.27119 3.17276 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 11 2.47481 0.60334 1.73659 1.64651 13 C - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 12 2.39161 0.83331 1.67217 1.25152 14 c - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 13 1.15539 2.33264 0.76293 2.10595 15 g - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 14 3.84581 4.67344 0.04324 4.45557 16 G - - > 1.38629 1.38629 1.38629 1.38629 0.25219 4.39743 1.55784 1.46634 0.26236 1.09861 0.40547 15 1.37601 2.95135 0.48017 2.57089 17 G - - - 1.38629 1.38629 1.38629 1.38629 0.35007 1.27295 4.17643 0.16592 1.87807 0.11056 2.25700 16 1.22239 1.79437 1.23934 1.38764 20 a - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 17 2.48909 3.51415 0.16075 3.33149 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 18 1.21050 1.54946 1.14383 1.76614 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.25474 4.39743 1.54849 1.46634 0.26236 1.09861 0.40547 19 2.40738 2.46171 2.62319 0.28490 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.03127 4.17396 4.17396 1.46634 0.26236 0.10958 2.26538 20 2.02598 1.02405 1.49730 1.25434 25 c - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 21 2.10384 1.01000 1.54173 1.20469 26 c - - < 1.38629 1.38629 1.38629 1.38629 0.04301 4.39743 3.51351 1.46634 0.26236 1.09861 0.40547 22 3.39169 2.76427 3.41061 0.13891 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.43226 4.37979 1.08344 1.46634 0.26236 0.60230 0.79308 23 1.58063 2.08305 1.25066 0.95896 28 u - - - 1.38629 1.38629 1.38629 1.38629 0.03689 4.01147 4.01147 1.46634 0.26236 0.07142 2.67463 24 3.58728 0.11764 4.13374 2.69875 29 C - - - 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 25 3.27681 2.97557 3.80173 0.11777 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 26 1.98084 2.64326 0.56771 1.49568 31 G - - - 1.38629 1.38629 1.38629 1.38629 0.25219 4.39743 1.55784 1.46634 0.26236 1.09861 0.40547 27 1.95851 0.83329 1.31641 1.85650 32 c - - - 1.38629 1.38629 1.38629 1.38629 0.59729 0.83392 4.17643 0.06926 2.70439 0.11056 2.25700 28 3.54528 3.36415 4.08696 0.08364 34 U - - - 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 29 2.80308 0.36375 3.44456 1.54932 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 30 3.54528 3.36415 4.08696 0.08364 36 U - - - 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 31 1.42870 0.76465 2.16700 1.71277 37 c - - - 1.38629 1.38629 1.38629 1.38629 0.07494 4.39743 2.81516 1.46634 0.26236 1.09861 0.40547 32 2.52042 0.56633 3.15054 1.17396 38 C - - - 1.38629 1.38629 1.38629 1.38629 0.02619 4.34868 4.34868 1.46634 0.26236 1.92658 0.15741 33 1.70137 1.00341 2.38157 1.02573 39 c - - - 1.38629 1.38629 1.38629 1.38629 0.45001 1.05139 4.34868 1.25522 0.33549 0.34431 1.23343 34 3.27921 0.24573 3.12523 1.99305 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.03693 3.73201 4.39743 0.83040 0.57248 1.09861 0.40547 35 0.81336 1.45381 1.79485 1.85276 47 a - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 36 1.31566 1.43593 1.19305 1.65803 48 g - - < 1.38629 1.38629 1.38629 1.38629 0.04017 3.60935 4.39743 0.74746 0.64164 1.09861 0.40547 37 1.73965 0.92123 1.60611 1.48845 50 c - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 38 0.32316 3.43789 1.59433 3.19505 51 A - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 39 2.40476 1.33645 1.59588 0.81146 52 u - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 40 2.53445 0.58050 1.64495 1.78346 53 C - - < 1.38629 1.38629 1.38629 1.38629 0.03693 4.39743 3.73201 1.46634 0.26236 1.09861 0.40547 41 0.51983 2.44554 2.15790 1.59389 54 A - - < 1.38629 1.38629 1.38629 1.38629 0.42843 1.09059 4.38573 0.08842 2.46958 0.70711 0.67938 42 1.98518 1.08603 1.96091 0.95618 57 u - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 43 2.21803 1.08267 1.62380 1.03468 58 u - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 44 1.60532 0.82095 2.13040 1.42556 59 c - - < 1.38629 1.38629 1.38629 1.38629 0.76692 1.67485 1.05491 0.12660 2.12939 1.09861 0.40547 45 1.45359 1.08766 2.28673 1.11575 61 c - - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 0.06831 2.71768 46 0.53353 2.17844 1.70904 2.12687 62 A - - - 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 47 1.74568 3.17960 0.30711 3.03027 63 G - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 48 1.89373 3.43813 0.24792 3.29832 64 G - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 49 4.44928 0.06529 4.34620 3.25552 65 C - - < 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 50 0.05600 4.20632 3.85208 3.99965 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 51 3.96406 0.06825 4.47000 3.33711 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 52 0.10208 3.39639 3.45152 3.44668 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 53 3.62536 4.60290 0.05402 4.13994 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 54 0.59964 2.38326 2.23979 1.37730 70 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 55 1.35847 1.87697 1.34356 1.11176 71 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 56 1.33689 0.90834 2.54145 1.36495 72 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 57 3.41207 4.50519 0.05960 4.28044 73 G - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 58 3.53082 0.27980 3.26400 1.73415 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 59 3.28598 0.33894 3.00203 1.60753 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.03693 4.39743 3.73201 1.46634 0.26236 1.09861 0.40547 60 1.29641 1.75356 1.43374 1.15545 76 u - - - 1.38629 1.38629 1.38629 1.38629 0.02522 4.38573 4.38573 1.46634 0.26236 0.70711 0.67938 61 1.10223 2.22612 0.95077 1.75171 77 g - - - 1.38629 1.38629 1.38629 1.38629 0.03629 3.75818 4.39743 0.84918 0.55821 1.09861 0.40547 62 0.23293 2.59162 2.79404 2.63505 80 A - - - 1.38629 1.38629 1.38629 1.38629 0.04074 4.39743 3.58950 1.46634 0.26236 1.09861 0.40547 63 1.08814 1.49667 1.36373 1.69511 81 a - - - 1.38629 1.38629 1.38629 1.38629 0.02532 4.38201 4.38201 1.46634 0.26236 1.44533 0.26875 64 0.50102 2.40300 2.27630 1.60457 82 A - - - 1.38629 1.38629 1.38629 1.38629 0.02532 4.38201 4.38201 1.46634 0.26236 1.44533 0.26875 65 0.19790 2.88366 3.06054 2.56708 83 A - - - 1.38629 1.38629 1.38629 1.38629 0.02532 4.38201 4.38201 1.46634 0.26236 1.44533 0.26875 66 2.03096 2.41414 1.10747 0.80084 84 u - - - 1.38629 1.38629 1.38629 1.38629 0.02532 4.38201 4.38201 1.46634 0.26236 1.44533 0.26875 67 1.55384 2.68314 0.44307 2.54909 85 G - - - 1.38629 1.38629 1.38629 1.38629 0.17859 1.89016 4.38201 0.15801 1.92305 0.63740 0.75219 68 1.31295 2.30147 0.89735 1.49963 87 g - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 69 1.14700 1.73832 0.98896 2.00519 88 g - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 70 1.05568 2.10694 0.97928 1.86526 89 g - - > 1.38629 1.38629 1.38629 1.38629 0.44014 1.10229 3.73201 0.07255 2.65960 1.09861 0.40547 71 1.68549 2.41789 2.27194 0.47413 91 U - - > 1.38629 1.38629 1.38629 1.38629 0.02522 4.38573 4.38573 1.46634 0.26236 0.70711 0.67938 72 2.02151 1.73673 0.55076 2.16334 92 G - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 73 1.49468 1.69102 0.73612 2.18585 93 g - - > 1.38629 1.38629 1.38629 1.38629 0.02493 4.39743 4.39743 1.46634 0.26236 1.09861 0.40547 74 3.08642 2.39104 3.24409 0.19383 94 U - - > 1.38629 1.38629 1.38629 1.38629 0.04074 4.39743 3.58950 1.46634 0.26236 1.09861 0.40547 75 1.69555 1.95553 0.79489 1.49888 95 g - - > 1.38629 1.38629 1.38629 1.38629 0.30868 1.71714 2.45338 0.13383 2.07732 1.44533 0.26875 76 1.89827 1.28454 1.14362 1.36754 97 g - - > 1.38629 1.38629 1.38629 1.38629 0.02735 4.30567 4.30567 1.46634 0.26236 0.53401 0.88249 77 1.91766 1.97138 1.33170 0.79905 98 u - - > 1.38629 1.38629 1.38629 1.38629 0.02562 4.37012 4.37012 1.46634 0.26236 0.98104 0.46988 78 2.49531 3.31716 0.19441 2.84810 99 G - - > 1.38629 1.38629 1.38629 1.38629 0.09969 4.38201 2.49641 1.46634 0.26236 1.44533 0.26875 79 0.79531 2.15505 2.36571 1.08241 100 a - - - 1.38629 1.38629 1.38629 1.38629 0.11194 4.30957 2.38093 1.46634 0.26236 0.40020 1.10922 80 1.76406 1.44226 1.71155 0.88752 101 u - - - 1.38629 1.38629 1.38629 1.38629 0.02735 4.30567 4.30567 1.46634 0.26236 2.31485 0.10401 81 1.97979 2.58488 0.58468 1.47311 102 G - - - 1.38629 1.38629 1.38629 1.38629 0.28629 1.53647 3.38683 0.12102 2.17167 2.31485 0.10401 82 0.43992 2.94182 1.47103 2.61107 104 A - - - 1.38629 1.38629 1.38629 1.38629 0.02793 4.28513 4.28513 1.46634 0.26236 2.45357 0.08991 83 0.67238 2.26524 1.44414 1.89876 105 A - - - 1.38629 1.38629 1.38629 1.38629 0.02793 4.28513 4.28513 1.46634 0.26236 2.45357 0.08991 84 0.92694 1.95992 1.68503 1.28039 106 a - - - 1.38629 1.38629 1.38629 1.38629 0.05672 4.28513 3.18523 1.46634 0.26236 2.45357 0.08991 85 0.48762 1.63050 2.58409 2.16615 107 A - - - 1.38629 1.38629 1.38629 1.38629 0.27612 4.25715 1.48228 1.46634 0.26236 2.61254 0.07618 86 0.38193 2.08565 2.50393 2.19399 108 A - - - 1.38629 1.38629 1.38629 1.38629 0.03665 4.01768 4.01768 1.46634 0.26236 0.65648 0.73121 87 0.82158 1.10578 2.49865 1.91656 109 a - - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.24050 3.83237 1.46634 0.26236 2.69461 0.06996 88 0.07632 3.90668 3.57206 3.67778 110 A - - - 1.38629 1.38629 1.38629 1.38629 0.02944 4.23321 4.23321 1.46634 0.26236 2.72810 0.06758 89 3.63713 0.09343 4.18157 3.04500 111 C - - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.23321 3.84451 1.46634 0.26236 1.80926 0.17886 90 0.14143 3.64654 2.61038 3.43274 112 A - - > 1.38629 1.38629 1.38629 1.38629 0.02900 4.24806 4.24806 1.46634 0.26236 2.26963 0.10909 91 1.37716 1.64512 0.88521 1.95129 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.02880 4.25483 4.25483 1.46634 0.26236 2.62448 0.07524 92 1.40987 1.62200 0.89015 1.91241 114 g - - > 1.38629 1.38629 1.38629 1.38629 0.04001 4.25483 3.68809 1.46634 0.26236 2.62448 0.07524 93 0.90656 1.52388 2.27936 1.28781 115 a - - - 1.38629 1.38629 1.38629 1.38629 0.02912 4.24394 4.24394 1.46634 0.26236 2.67827 0.07115 94 1.95107 1.22721 1.40583 1.14067 116 u - - > 1.38629 1.38629 1.38629 1.38629 0.02912 4.24394 4.24394 1.46634 0.26236 2.67827 0.07115 95 3.61488 0.15758 3.41131 2.45486 117 C - - > 1.38629 1.38629 1.38629 1.38629 0.02912 4.24394 4.24394 1.46634 0.26236 2.67827 0.07115 96 1.49169 1.59990 1.54296 1.02347 118 u - - > 1.38629 1.38629 1.38629 1.38629 0.01467 4.22949 * 1.46634 0.26236 0.00000 * //