INFERNAL1/a [1.1.5 | Sep 2023] NAME SNORD42 ACC RF00150 DESC Small nucleolar RNA SNORD42 STATES 208 NODES 65 CLEN 68 W 102 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 01:38:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00150/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 2.758301 CKSUM 4156306611 NULL 0.000 0.000 0.000 0.000 GA 39.00 TC 39.10 NC 38.80 EFP7GF -9.5509 0.71880 ECMLC 0.59071 -6.24496 3.09418 1600000 298575 0.004019 ECMGC 0.38811 -16.45123 -1.82955 1600000 116582 0.003431 ECMLI 0.51821 -4.89988 5.19492 1600000 224416 0.005347 ECMGI 0.42947 -10.27297 2.16753 1600000 83641 0.004782 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 102 144 -9.232 -9.171 -0.212 -7.947 -8.227 -2.992 IL 1 1 2 1 6 1 22 103 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 22 103 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 78 g c - - MP 3 2 3 7 6 2 24 102 144 -9.042 -8.981 -0.022 -7.758 -8.038 -8.433 -3.405 -2.609 -3.399 0.954 -3.284 -4.052 1.114 -3.560 -3.459 2.845 -3.876 -0.361 1.229 -3.441 -0.884 -2.338 ML 4 2 3 7 6 1 18 100 142 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 18 100 142 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 16 99 141 -10.759 -9.457 -0.473 -5.936 -5.954 -2.029 IL 7 7 5 7 6 1 20 101 143 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 20 101 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 77 u a - - MP 9 8 6 13 6 2 23 100 142 -9.232 -9.171 -0.019 -7.947 -8.227 -8.622 -0.005 -1.757 -1.825 1.101 -1.795 -2.645 1.430 -2.151 -1.873 0.995 -0.335 -0.383 1.598 -1.957 -0.022 -0.294 ML 10 8 6 13 6 1 18 98 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 17 98 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 13 95 137 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 19 99 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 20 99 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 76 G C - - MP 15 14 6 19 6 2 21 98 140 -9.232 -9.171 -0.019 -7.947 -8.227 -8.622 -4.082 -2.758 -4.113 0.758 -4.953 -4.778 -0.347 -4.460 -4.003 3.132 -4.420 1.691 -0.612 -4.155 -2.323 -2.975 ML 16 14 6 19 6 1 17 96 138 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 16 96 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 13 93 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 19 97 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 19 97 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 75 C G - - MP 21 20 6 25 6 2 19 96 138 -9.232 -9.171 -0.086 -4.363 -8.227 -8.622 -4.371 -4.348 -4.299 -0.840 -3.415 -4.876 3.595 -4.142 -4.359 -0.669 -0.888 -2.485 0.086 -4.576 -1.247 -3.317 ML 22 20 6 25 6 1 17 95 137 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 15 94 136 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 12 92 134 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 17 95 137 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 17 95 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 74 a u - - MP 27 26 6 31 4 2 18 94 136 -7.096 -7.303 -0.048 -5.717 -3.154 -2.748 -3.209 2.334 -2.872 -4.063 1.356 -3.246 -3.219 1.286 -3.715 -0.575 1.791 -3.415 -0.604 -2.164 ML 28 26 6 31 4 1 16 94 136 -1.416 -4.507 -1.073 -3.236 -0.272 0.754 -0.994 -0.025 MR 29 26 6 31 4 1 13 92 134 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 12 91 133 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 17 93 136 -2.324 -3.008 -0.613 -5.493 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 16 94 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - u - - - ML 33 32 6 35 3 1 16 92 134 -8.250 -0.017 -6.904 0.429 -0.984 -1.238 0.786 D 34 32 6 35 3 0 11 90 132 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 15 93 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - A - - - ML 36 35 3 38 3 1 15 91 133 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 37 35 3 38 3 0 11 89 131 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 15 92 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - U - - - ML 39 38 3 41 3 1 14 90 132 -8.250 -0.017 -6.904 -0.417 -1.163 -1.647 1.313 D 40 38 3 41 3 0 10 88 130 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 14 91 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - G - - - ML 42 41 3 44 3 1 13 89 131 -8.250 -0.017 -6.904 -0.407 -2.225 1.441 -1.656 D 43 41 3 44 3 0 9 87 129 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 13 90 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - A - - - ML 45 44 3 47 3 1 12 88 130 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 46 44 3 47 3 0 9 86 128 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 12 89 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - U - - - ML 48 47 3 50 3 1 12 87 129 -8.250 -0.017 -6.904 -2.027 -1.931 -2.783 1.743 D 49 47 3 50 3 0 8 85 127 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 11 88 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 51 50 3 53 3 1 11 86 128 -8.250 -0.017 -6.904 -2.176 -3.479 1.829 -2.865 D 52 50 3 53 3 0 8 84 126 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 11 87 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - G - - - ML 54 53 3 56 3 1 10 85 127 -8.250 -0.017 -6.904 -2.176 -3.479 1.829 -2.865 D 55 53 3 56 3 0 7 83 125 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 10 86 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - A - - - ML 57 56 3 59 3 1 9 84 126 -8.250 -0.450 -1.919 1.818 -2.950 -2.525 -2.551 D 58 56 3 59 3 0 7 82 124 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 9 85 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 60 59 3 62 3 1 8 83 125 -7.823 -0.023 -6.477 1.650 -2.088 -1.748 -1.604 D 61 59 3 62 3 0 6 82 124 -8.132 -0.282 -2.524 IL 62 62 3 62 3 1 8 84 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - A - - - ML 63 62 3 65 3 1 7 82 124 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 64 62 3 65 3 0 4 80 122 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 83 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 66 65 3 68 3 1 6 81 123 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 67 65 3 68 3 0 4 79 121 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 7 82 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 69 68 3 71 3 1 6 80 122 -8.250 -0.447 -1.926 1.818 -2.950 -2.525 -2.551 D 70 68 3 71 3 0 4 78 120 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 8 81 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 72 71 3 74 3 1 9 80 122 -7.825 -0.023 -6.479 1.127 -1.340 -0.252 -0.785 D 73 71 3 74 3 0 3 76 118 -8.127 -3.640 -0.126 IL 74 74 3 74 3 1 7 80 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 75 74 3 77 3 1 9 79 121 -7.825 -0.023 -6.479 -1.233 -1.275 -1.952 1.538 D 76 74 3 77 3 0 3 76 118 -8.127 -1.528 -0.622 IL 77 77 3 77 3 1 7 79 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - c - - - ML 78 77 3 80 3 1 9 78 120 -7.992 -0.020 -6.646 -0.752 0.668 -1.545 0.561 D 79 77 3 80 3 0 2 74 116 -7.680 -3.193 -0.175 IL 80 80 3 80 3 1 7 78 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 81 80 3 83 3 1 8 77 119 -7.992 -0.020 -6.646 -1.538 -1.525 -2.274 1.633 D 82 80 3 83 3 0 2 73 115 -7.680 -3.193 -0.175 IL 83 83 3 83 3 1 6 77 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - u - - - ML 84 83 3 86 3 1 8 76 118 -7.992 -0.020 -6.646 0.127 -0.276 -0.445 0.430 D 85 83 3 86 3 0 2 72 114 -7.680 -3.193 -0.175 IL 86 86 3 86 3 1 6 76 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 87 86 3 89 3 1 8 75 117 -7.992 -0.020 -6.646 1.731 -2.428 -2.055 -1.976 D 88 86 3 89 3 0 1 71 113 -7.680 -3.193 -0.175 IL 89 89 3 89 3 1 6 75 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - A - - - ML 90 89 3 92 3 1 7 74 116 -3.319 -0.168 -6.646 1.731 -2.428 -2.055 -1.976 D 91 89 3 92 3 0 1 70 112 -7.680 -3.193 -0.175 IL 92 92 3 92 3 1 6 74 116 -1.738 -0.612 -4.438 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - U - - - ML 93 92 3 95 3 1 7 72 115 -7.992 -0.020 -6.646 -0.104 -0.905 -1.298 1.090 D 94 92 3 95 3 0 1 70 112 -7.680 -3.193 -0.175 IL 95 95 3 95 3 1 5 73 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - c - - - ML 96 95 3 98 3 1 6 71 114 -7.992 -0.020 -6.646 -0.369 0.435 -0.513 0.230 D 97 95 3 98 3 0 1 69 111 -7.680 -3.193 -0.175 IL 98 98 3 98 3 1 5 72 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - U - - - ML 99 98 3 101 3 1 5 70 113 -7.992 -0.020 -6.646 -1.538 -1.525 -2.274 1.633 D 100 98 3 101 3 0 1 69 111 -7.680 -0.401 -2.071 IL 101 101 3 101 3 1 4 71 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - u - - - ML 102 101 3 104 3 1 5 69 112 -8.250 -0.017 -6.904 -0.187 -0.062 -1.306 0.815 D 103 101 3 104 3 0 0 67 109 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 70 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - C - - - ML 105 104 3 107 3 1 4 68 111 -2.586 -0.277 -6.904 -1.419 1.370 -2.274 -0.261 D 106 104 3 107 3 0 0 65 107 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 69 111 -1.990 -0.495 -4.690 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - U - - - ML 108 107 3 110 3 1 4 67 109 -1.924 -0.458 -6.904 -0.877 -1.160 -0.885 1.303 D 109 107 3 110 3 0 0 59 102 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 69 111 -0.632 -1.557 -6.090 0.000 0.000 0.000 0.000 [ MATL 32 ] 40 - G - - - ML 111 110 3 113 3 1 3 49 70 -8.250 -0.017 -6.904 -2.176 -3.479 1.829 -2.865 D 112 110 3 113 3 0 0 47 68 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 50 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 41 - A - - - ML 114 113 3 116 3 1 3 48 68 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 115 113 3 116 3 0 0 46 67 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 49 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 42 - a - - - ML 117 116 3 119 3 1 2 47 67 -8.250 -0.017 -6.904 0.549 -0.233 -0.123 -0.381 D 118 116 3 119 3 0 0 45 66 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 48 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 43 - A - - - ML 120 119 3 122 3 1 2 46 66 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 121 119 3 122 3 0 0 44 65 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 47 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 44 - a - - - ML 123 122 3 125 3 1 1 45 65 -8.250 -0.166 -3.248 0.879 0.103 -1.298 -0.556 D 124 122 3 125 3 0 0 43 64 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 46 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 45 - u - - - ML 126 125 3 128 3 1 1 44 64 -8.102 -0.019 -6.756 -0.317 -0.474 0.308 0.310 D 127 125 3 128 3 0 0 42 63 -7.239 -0.577 -1.631 IL 128 128 3 128 3 1 1 45 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 46 - u - - - ML 129 128 3 131 3 1 1 43 63 -8.250 -0.017 -6.904 0.429 -0.984 -1.238 0.786 D 130 128 3 131 3 0 0 41 62 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 44 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 47 - g - - - ML 132 131 3 134 3 1 1 42 62 -8.250 -0.017 -6.904 0.594 -1.707 0.788 -1.128 D 133 131 3 134 3 0 0 40 61 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 43 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 48 - U - - - ML 135 134 3 137 3 1 1 41 61 -8.250 -0.017 -6.904 -2.027 -1.931 -2.783 1.743 D 136 134 3 137 3 0 0 39 60 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 42 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 49 - G - - - ML 138 137 3 140 3 1 1 39 60 -8.250 -0.017 -6.904 -2.176 -3.479 1.829 -2.865 D 139 137 3 140 3 0 0 38 59 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 41 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 50 - A - - - ML 141 140 3 143 3 1 1 38 59 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 142 140 3 143 3 0 0 37 58 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 40 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 51 - u - - - ML 144 143 3 146 3 1 1 37 58 -8.250 -0.017 -6.904 -0.953 0.382 -1.747 0.912 D 145 143 3 146 3 0 0 36 57 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 39 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 52 - g - - - ML 147 146 3 149 3 1 1 36 57 -8.250 -0.017 -6.904 0.594 -1.707 0.788 -1.128 D 148 146 3 149 3 0 0 35 56 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 38 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 53 - U - - - ML 150 149 3 152 3 1 1 35 56 -8.250 -0.017 -6.904 -1.227 -0.554 -1.979 1.399 D 151 149 3 152 3 0 0 34 55 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 37 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 54 - c - - - ML 153 152 3 155 3 1 1 34 55 -8.250 -0.017 -6.904 -0.747 0.960 -0.384 -0.530 D 154 152 3 155 3 0 0 33 54 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 36 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 55 - a - - - ML 156 155 3 158 3 1 1 33 54 -8.250 -0.017 -6.904 0.799 -1.036 -1.202 0.420 D 157 155 3 158 3 0 0 32 53 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 35 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 56 - u - - - ML 159 158 3 161 3 1 1 32 53 -8.250 -0.017 -6.904 0.429 -0.984 -1.238 0.786 D 160 158 3 161 3 0 0 31 52 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 34 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 57 - C - - - ML 162 161 3 164 3 1 1 31 52 -8.250 -0.017 -6.904 -2.441 1.769 -3.271 -1.718 D 163 161 3 164 3 0 0 30 50 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 33 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 58 - A - - - ML 165 164 3 167 3 1 1 30 51 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 166 164 3 167 3 0 0 29 49 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 32 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 59 - A - - - ML 168 167 3 170 3 1 1 29 50 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 169 167 3 170 3 0 0 28 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 31 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 60 - A - - - ML 171 170 3 173 3 1 1 28 49 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 172 170 3 173 3 0 0 27 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 61 - G - - - ML 174 173 3 176 3 1 1 27 48 -8.250 -0.017 -6.904 -2.176 -3.479 1.829 -2.865 D 175 173 3 176 3 0 0 26 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 29 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 62 - G - - - ML 177 176 3 179 3 1 1 26 47 -8.250 -0.017 -6.904 -2.176 -3.479 1.829 -2.865 D 178 176 3 179 3 0 0 25 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 28 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 63 - A - - - ML 180 179 3 182 3 1 1 25 46 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 181 179 3 182 3 0 0 24 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 64 - A - - - ML 183 182 3 185 3 1 1 24 45 -8.250 -0.017 -6.904 1.818 -2.950 -2.525 -2.551 D 184 182 3 185 3 0 0 22 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 65 - C - - - ML 186 185 3 188 3 1 1 23 44 -8.250 -0.017 -6.904 -2.441 1.769 -3.271 -1.718 D 187 185 3 188 3 0 0 21 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 66 - C - - - ML 189 188 3 191 3 1 1 22 43 -8.250 -0.166 -3.248 -2.441 1.769 -3.271 -1.718 D 190 188 3 191 3 0 0 21 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 67 - A - - - ML 192 191 3 194 3 1 1 21 42 -8.102 -0.019 -6.756 1.773 -2.652 -2.256 -2.222 D 193 191 3 194 3 0 0 20 40 -7.239 -0.577 -1.631 IL 194 194 3 194 3 1 1 23 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 68 - C - - - ML 195 194 3 197 3 1 1 20 41 -8.250 -0.017 -6.904 -2.441 1.769 -3.271 -1.718 D 196 194 3 197 3 0 0 18 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 69 - U - - - ML 198 197 3 200 3 1 1 19 40 -3.522 -0.145 -6.904 -2.027 -1.931 -2.783 1.743 D 199 197 3 200 3 0 0 16 36 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 41 -1.284 -0.860 -4.702 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - G - - - ML 201 200 3 203 3 1 1 13 31 -8.250 -0.017 -6.904 0.226 -1.855 1.099 -1.279 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - A - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 1.818 -2.950 -2.525 -2.551 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SNORD42 ACC RF00150 DESC Small nucleolar RNA SNORD42 LENG 68 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 01:38:45 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00150/CM NSEQ 7 EFFN 3.127441 CKSUM 4156306611 STATS LOCAL MSV -8.1428 0.71880 STATS LOCAL VITERBI -9.0647 0.71880 STATS LOCAL FORWARD -3.3096 0.71880 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.00906 1.68662 1.51703 1.46564 1.38629 1.38629 1.38629 1.38629 0.38664 4.11756 1.18948 1.46634 0.26236 0.00000 * 1 1.95957 1.93826 0.65627 1.62789 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04683 3.77775 3.77775 1.46634 0.26236 0.10165 2.33659 2 1.44959 1.57660 1.43316 1.13912 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 3 2.14408 2.96163 0.26051 2.80627 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 4 3.18012 0.25089 2.46421 2.35136 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 5 1.06044 1.67781 1.66460 1.28140 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.14711 2.11600 4.11756 0.25130 1.50414 1.09861 0.40547 6 1.08131 2.11329 2.28928 0.82401 7 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 7 0.10703 3.58466 3.27630 3.32450 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 8 1.70705 2.26046 2.60492 0.44568 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 9 1.70225 3.02743 0.35957 2.64072 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 10 0.10703 3.58466 3.27630 3.32450 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 11 2.93879 2.84805 3.46740 0.15325 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 12 3.04640 3.96701 0.10040 3.53823 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 13 3.04640 3.96701 0.10040 3.53823 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 14 0.10703 3.58466 3.27630 3.32450 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.36807 4.11756 1.23221 1.46634 0.26236 1.09861 0.40547 15 0.21238 2.95228 2.70499 2.62762 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04599 3.79547 3.79547 1.46634 0.26236 0.10586 2.29807 16 0.10703 3.58466 3.27630 3.32450 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 17 0.10703 3.58466 3.27630 3.32450 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 18 0.10703 3.58466 3.27630 3.32450 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.36613 4.11756 1.23682 1.46634 0.26236 1.09861 0.40547 19 0.58092 2.36849 1.56097 1.98730 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04590 3.79733 3.79733 1.46634 0.26236 2.98706 0.05175 20 2.34839 2.35787 2.85331 0.28475 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04590 3.79733 3.79733 1.46634 0.26236 1.03443 0.43917 21 1.96576 0.89302 2.52278 0.99345 22 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 2.62323 0.07534 22 2.57844 2.54778 3.09454 0.22245 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 2.62323 0.07534 23 1.30053 1.57678 1.69461 1.08677 24 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 2.62323 0.07534 24 0.16071 3.20562 2.93301 2.90602 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 2.62323 0.07534 25 0.16071 3.20562 2.93301 2.90602 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.15613 2.08103 3.92453 0.29112 1.37606 2.62323 0.07534 26 1.47612 2.05936 2.33876 0.60240 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 2.62323 0.07534 27 1.67442 1.05909 1.74435 1.23425 29 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 2.62323 0.07534 28 2.57844 2.54778 3.09454 0.22245 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04030 3.92453 3.92453 1.46634 0.26236 0.15681 1.93008 29 1.53123 1.42117 2.33421 0.80875 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 30 2.47541 0.40277 3.07743 1.60281 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.23334 1.65114 4.11756 0.16190 1.90062 1.09861 0.40547 31 2.06981 2.25849 2.02420 0.45070 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.37447 1.21720 4.11756 1.36036 0.29648 1.09861 0.40547 32 3.04640 3.96701 0.10040 3.53823 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 33 0.10703 3.58466 3.27630 3.32450 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 34 0.99766 1.53936 1.46424 1.68477 42 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 35 0.10703 3.58466 3.27630 3.32450 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 36 0.75460 1.29752 2.34635 1.82712 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.14711 4.11756 2.11600 1.46634 0.26236 1.09861 0.40547 37 1.63605 1.72121 1.14830 1.17368 45 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00749 4.00749 1.46634 0.26236 0.23921 1.54763 38 1.08131 2.11329 2.28928 0.82401 46 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 39 0.96372 2.65107 0.81394 2.25527 47 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 40 2.93879 2.84805 3.46740 0.15325 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 41 3.04640 3.96701 0.10040 3.53823 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 42 0.10703 3.58466 3.27630 3.32450 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 43 2.11844 1.10024 2.67554 0.73789 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 44 0.96372 2.65107 0.81394 2.25527 52 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 45 2.32802 1.79212 2.85174 0.38837 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 46 1.98183 0.67574 1.65545 1.81771 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 47 0.81476 2.14869 2.26420 1.08855 55 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 48 1.08131 2.11329 2.28928 0.82401 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 49 3.26271 0.13386 3.83226 2.72808 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 50 0.10703 3.58466 3.27630 3.32450 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 51 0.10703 3.58466 3.27630 3.32450 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 52 0.10703 3.58466 3.27630 3.32450 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 53 3.04640 3.96701 0.10040 3.53823 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 54 3.04640 3.96701 0.10040 3.53823 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 55 0.10703 3.58466 3.27630 3.32450 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 56 0.10703 3.58466 3.27630 3.32450 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 57 3.26271 0.13386 3.83226 2.72808 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 58 3.26271 0.13386 3.83226 2.72808 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.14711 4.11756 2.11600 1.46634 0.26236 1.09861 0.40547 59 0.13465 3.36940 3.08088 3.08678 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03704 4.00749 4.00749 1.46634 0.26236 0.23921 1.54763 60 3.26271 0.13386 3.83226 2.72808 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 61 2.93879 2.84805 3.46740 0.15325 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.13087 2.24070 4.11756 0.80123 0.59562 1.09861 0.40547 62 1.23394 2.75777 0.59520 2.36476 72 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 63 0.10703 3.58466 3.27630 3.32450 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.14711 4.11756 2.11600 1.46634 0.26236 1.09861 0.40547 64 1.40968 1.82759 1.59456 0.93655 74 u - - > 1.38629 1.38629 1.38629 1.38629 0.03704 4.00749 4.00749 1.46634 0.26236 0.23921 1.54763 65 2.59948 3.16089 0.18377 2.97263 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 66 3.03510 0.56798 2.77261 1.13084 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.03311 4.11756 4.11756 1.46634 0.26236 1.09861 0.40547 67 1.22792 1.79978 1.21513 1.40613 77 g - - > 1.38629 1.38629 1.38629 1.38629 0.38664 4.11756 1.18948 1.46634 0.26236 1.09861 0.40547 68 1.80736 0.73216 1.76504 1.69355 78 c - - > 1.38629 1.38629 1.38629 1.38629 0.02369 3.75461 * 1.46634 0.26236 0.00000 * //