INFERNAL1/a [1.1.5 | Sep 2023] NAME HDV_ribozyme ACC RF00094 DESC Hepatitis delta virus ribozyme STATES 276 NODES 73 CLEN 89 W 114 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 08:21:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00094/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 33 EFFN 1.631470 CKSUM 457633856 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.10 NC 49.90 EFP7GF -7.1504 0.71880 ECMLC 0.53708 -10.40187 0.28801 1600000 373772 0.003211 ECMGC 0.36133 -15.51754 -2.82717 1600000 39219 0.010199 ECMLI 0.44050 -9.31312 2.56291 1600000 224451 0.005346 ECMGI 0.40735 -9.14115 1.89324 1600000 35824 0.011166 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 114 142 -6.820 -7.027 -0.083 -4.667 IL 1 1 2 1 4 7 38 117 145 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 7 38 116 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 7 37 114 142 -7.824 -0.023 -6.478 0.150 -0.749 -0.142 0.475 D 4 2 3 5 3 3 33 113 141 -6.348 -1.362 -0.740 IL 5 5 3 5 3 6 37 115 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 7 36 113 141 -8.245 -0.020 -6.562 -0.613 0.317 -1.374 0.778 D 7 5 3 8 3 3 32 112 140 -5.620 -0.734 -1.403 IL 8 8 3 8 3 5 35 114 142 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 115 - a - - MR 9 8 3 11 3 6 35 112 140 -8.245 -0.020 -6.562 0.414 -0.216 -0.819 0.310 D 10 8 3 11 3 3 31 110 139 -6.390 -1.568 -0.620 IR 11 11 3 11 3 5 35 113 141 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 114 - c - - MR 12 11 3 14 3 6 34 111 139 -8.245 -0.020 -6.562 -0.256 0.550 -0.278 -0.194 D 13 11 3 14 3 2 30 109 138 -6.390 -1.568 -0.620 IR 14 14 3 14 3 5 34 112 140 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 113 - a - - MR 15 14 3 17 3 5 33 110 138 -8.245 -0.020 -6.562 0.404 0.285 -0.804 -0.175 D 16 14 3 17 3 2 29 108 137 -6.390 -1.568 -0.620 IR 17 17 3 17 3 4 33 111 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 112 - C - - MR 18 17 3 20 3 5 32 109 138 -8.245 -0.020 -6.562 -1.459 1.538 -2.271 -0.931 D 19 17 3 20 3 2 28 107 136 -6.390 -1.568 -0.620 IR 20 20 3 20 3 4 32 110 138 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 111 - a - - MR 21 20 3 23 3 5 31 108 137 -8.245 -0.020 -6.562 0.492 0.059 -0.582 -0.179 D 22 20 3 23 3 1 27 106 135 -6.390 -1.568 -0.620 IR 23 23 3 23 3 4 31 109 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 110 - G - - MR 24 23 3 26 3 5 30 107 136 -8.245 -0.020 -6.562 -0.905 -1.882 1.446 -1.087 D 25 23 3 26 3 1 26 105 134 -6.390 -1.568 -0.620 IR 26 26 3 26 3 4 30 108 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 109 - g - - MR 27 26 3 29 3 4 29 106 135 -8.245 -0.020 -6.562 0.453 -1.115 0.499 -0.403 D 28 26 3 29 3 1 26 104 132 -6.390 -1.568 -0.620 IR 29 29 3 29 3 3 29 107 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 108 - G - - MR 30 29 3 32 3 4 28 105 134 -8.245 -0.020 -6.562 -1.328 -2.507 1.658 -1.892 D 31 29 3 32 3 1 25 103 131 -6.390 -1.568 -0.620 IR 32 32 3 32 3 3 28 106 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 107 - u - - MR 33 32 3 35 3 4 28 104 133 -2.326 -0.340 -6.562 0.442 -0.780 -1.007 0.643 D 34 32 3 35 3 0 24 99 127 -6.390 -1.568 -0.620 IR 35 35 3 35 3 3 28 106 134 -0.939 -1.125 -5.639 0.000 0.000 0.000 0.000 [ MATR 12 ] - 103 - A - - MR 36 35 3 38 3 4 26 99 120 -8.245 -0.020 -6.562 1.663 -2.135 -1.791 -1.655 D 37 35 3 38 3 0 24 97 118 -6.390 -1.568 -0.620 IR 38 38 3 38 3 3 26 99 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 102 - A - - MR 39 38 3 41 3 3 25 98 119 -8.245 -0.020 -6.562 1.552 -1.847 -1.322 -1.359 D 40 38 3 41 3 0 23 96 117 -6.390 -1.568 -0.620 IR 41 41 3 41 3 2 25 98 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 101 - u - - MR 42 41 3 44 3 3 24 97 118 -8.245 -0.020 -6.562 0.148 -0.811 0.126 0.300 D 43 41 3 44 3 0 22 95 116 -6.390 -1.568 -0.620 IR 44 44 3 44 3 2 25 97 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 100 - C - - MR 45 44 3 47 3 2 23 96 117 -8.245 -0.020 -6.562 -1.459 1.538 -2.271 -0.931 D 46 44 3 47 3 0 22 94 116 -6.390 -1.568 -0.620 IR 47 47 3 47 3 2 24 96 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 99 - G - - MR 48 47 3 50 2 1 23 95 116 -8.214 -0.005 -1.328 -2.507 1.658 -1.892 D 49 47 3 50 2 0 22 94 115 -4.432 -0.068 IR 50 50 3 50 2 1 23 96 117 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 17 ] - - - - - - B 51 50 3 52 165 0 21 94 115 [ BEGL 18 ] - - - - - - S 52 51 1 53 4 0 0 55 76 -0.047 -6.770 -6.178 -6.818 [ MATP 19 ] 3 48 g u - - MP 53 52 1 57 6 2 2 55 76 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.432 -2.278 -3.584 1.229 -4.218 -4.824 0.147 -3.676 -3.319 1.872 -3.826 2.751 -0.166 -4.058 -1.790 -2.342 ML 54 52 1 57 6 1 1 53 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 55 52 1 57 6 1 1 53 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 1 57 6 0 0 51 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 1 54 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 4 47 G C - - MP 59 58 6 63 6 2 2 53 74 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.515 -2.986 -4.596 0.349 -4.913 -4.603 -0.333 -4.820 -4.176 3.579 -4.529 -0.678 -0.725 -4.318 -2.358 -3.476 ML 60 58 6 63 6 1 1 51 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 61 58 6 63 6 1 1 51 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 0 49 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 52 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 5 46 c g - - MP 65 64 6 69 6 2 2 51 72 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.314 -2.829 -3.305 0.800 -2.788 -4.003 2.283 -3.267 -3.342 2.249 -3.782 -0.652 1.090 -3.435 -0.432 -2.218 ML 66 64 6 69 6 1 1 49 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 67 64 6 69 6 1 1 49 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 68 64 6 69 6 0 0 47 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 69 69 5 69 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 70 70 6 70 5 1 1 50 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 6 45 c g - - MP 71 70 6 75 6 2 2 49 70 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.552 -3.466 -3.441 0.251 -2.422 -4.024 2.685 -3.119 -3.457 0.535 -3.851 -1.448 2.190 -3.694 -0.101 -2.333 ML 72 70 6 75 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 73 70 6 75 6 1 1 47 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 74 70 6 75 6 0 0 45 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 75 75 5 75 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 76 76 6 76 5 1 1 48 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 7 44 g c - - MP 77 76 6 81 6 2 2 47 68 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -2.855 -2.479 -2.923 1.006 -2.681 -3.673 1.984 -3.069 -2.993 2.287 -2.416 -0.436 1.121 -3.013 -0.429 -1.937 ML 78 76 6 81 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 79 76 6 81 6 1 1 45 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 6 81 6 0 0 43 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 1 46 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 8 43 G C - - MP 83 82 6 87 6 2 2 45 66 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.515 -2.986 -4.596 0.349 -4.913 -4.603 -0.333 -4.820 -4.176 3.579 -4.529 -0.678 -0.725 -4.318 -2.358 -3.476 ML 84 82 6 87 6 1 1 44 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 6 87 6 1 1 44 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 6 87 6 0 0 42 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 44 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 9 42 c g - - MP 89 88 6 93 4 2 2 43 64 -6.820 -7.027 -0.058 -5.441 -3.314 -2.829 -3.305 0.800 -2.788 -4.003 2.283 -3.267 -3.342 2.249 -3.782 -0.652 1.090 -3.435 -0.432 -2.218 ML 90 88 6 93 4 1 1 43 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 4 1 1 43 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 92 88 6 93 4 0 0 42 62 -4.568 -4.250 -2.265 -0.520 IL 93 93 5 93 4 1 1 44 65 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 94 94 6 94 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 10 - a - - - ML 95 94 6 97 3 1 1 41 61 -7.846 -0.022 -6.500 0.684 0.106 -1.023 -0.279 D 96 94 6 97 3 0 0 39 60 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 42 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 11 - u - - - ML 98 97 3 100 3 1 1 40 60 -7.846 -0.022 -6.500 0.442 -0.780 -1.007 0.643 D 99 97 3 100 3 0 0 38 59 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 41 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 12 - g - - - ML 101 100 3 103 3 1 1 39 59 -7.846 -0.022 -6.500 -0.315 -0.913 0.419 0.409 D 102 100 3 103 3 0 0 37 58 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 40 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 13 - G - - - ML 104 103 3 106 3 1 1 38 58 -7.846 -0.022 -6.500 -1.328 -2.507 1.658 -1.892 D 105 103 3 106 3 0 0 36 57 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 39 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 14 - u - - - ML 107 106 3 109 3 1 1 37 57 -7.846 -0.050 -5.079 -0.230 -0.512 0.086 0.470 D 108 106 3 109 3 0 0 35 55 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 38 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 15 - C - - - ML 110 109 3 112 3 1 1 36 56 -2.188 -0.378 -6.473 -0.794 1.198 -1.309 -0.464 D 111 109 3 112 3 0 0 33 54 -6.386 -1.305 -0.777 IL 112 112 3 112 3 1 1 36 56 -1.979 -0.500 -4.679 0.000 0.000 0.000 0.000 [ MATL 32 ] 17 - u - - - ML 113 112 3 115 3 1 1 34 54 -7.846 -0.022 -6.500 -0.620 0.513 -1.391 0.624 D 114 112 3 115 3 0 0 32 53 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 18 - C - - - ML 116 115 3 118 3 1 1 33 53 -7.846 -0.022 -6.500 -1.459 1.538 -2.271 -0.931 D 117 115 3 118 3 0 0 31 52 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 19 - a - - - ML 119 118 3 121 5 1 1 32 52 -2.396 -0.342 -6.806 -7.019 -7.910 0.626 -0.811 -0.986 0.466 D 120 118 3 121 5 0 0 29 49 -4.959 -0.803 -4.221 -2.596 -2.508 IL 121 121 3 121 5 1 1 33 53 -1.313 -0.863 -5.195 -7.027 -6.301 0.000 0.000 0.000 0.000 [ MATP 35 ] 28 41 g c - - MP 122 121 3 126 6 2 2 28 47 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.484 -2.473 -3.519 1.923 -3.888 -4.322 0.516 -3.786 -3.504 2.882 -3.957 -0.108 0.198 -3.629 -1.445 -2.424 ML 123 121 3 126 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 3 126 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 3 126 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 29 40 C G - - MP 128 127 6 132 6 2 2 26 45 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.314 -4.198 -4.043 -0.453 -2.815 -4.485 3.471 -3.601 -4.085 -0.176 -4.370 -2.142 0.722 -4.398 -0.516 -2.933 ML 129 127 6 132 6 1 1 25 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 30 39 C G - - MP 134 133 6 138 4 2 2 24 43 -6.820 -7.027 -0.058 -5.441 -4.314 -4.198 -4.043 -0.453 -2.815 -4.485 3.471 -3.601 -4.085 -0.176 -4.370 -2.142 0.722 -4.398 -0.516 -2.933 ML 135 133 6 138 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 137 133 6 138 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 138 138 5 138 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 139 139 6 139 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 31 - U - - - ML 140 139 6 142 3 1 1 21 40 -7.846 -0.022 -6.500 -1.271 -1.306 -1.993 1.551 D 141 139 6 142 3 0 0 20 39 -6.174 -1.687 -0.566 IL 142 142 3 142 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 32 - C - - - ML 143 142 3 145 3 1 1 20 39 -7.846 -0.022 -6.500 -0.892 1.339 -1.827 -0.624 D 144 142 3 145 3 0 0 19 38 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 33 - C - - - ML 146 145 3 148 3 1 1 19 37 -7.846 -0.022 -6.500 -1.459 1.538 -2.271 -0.931 D 147 145 3 148 3 0 0 18 37 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 34 - u - - - ML 149 148 3 151 3 1 1 18 36 -7.846 -0.022 -6.500 -0.653 0.009 -1.400 0.985 D 150 148 3 151 3 0 0 17 36 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 35 - C - - - ML 152 151 3 154 3 1 1 16 35 -7.846 -0.022 -6.500 -1.267 1.439 -2.079 -0.652 D 153 151 3 154 3 0 0 16 34 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 36 - G - - - ML 155 154 3 157 3 1 1 15 33 -7.846 -0.022 -6.500 -0.533 -1.388 1.276 -0.984 D 156 154 3 157 3 0 0 15 33 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 37 - c - - - ML 158 157 3 160 3 1 1 13 32 -7.846 -0.370 -2.171 -0.510 0.819 -1.015 0.054 D 159 157 3 160 3 0 0 13 32 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 38 - U - - - ML 161 160 3 163 2 1 1 1 1 * 0.000 -0.556 -0.585 -1.251 1.159 D 162 160 3 163 2 0 0 0 0 * 0.000 IL 163 163 3 163 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 164 163 3 -1 0 0 0 0 0 [ BEGR 47 ] - - - - - - S 165 51 1 166 3 0 1 54 73 -7.846 -0.022 -6.500 IL 166 166 2 166 3 1 1 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 49 - G - - - ML 167 166 2 169 3 1 2 54 73 -7.846 -0.022 -6.500 -1.328 -2.507 1.658 -1.892 D 168 166 2 169 3 0 0 52 72 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 50 - G - - - ML 170 169 3 172 3 1 2 53 72 -7.846 -0.022 -6.500 -1.328 -2.507 1.658 -1.892 D 171 169 3 172 3 0 0 51 71 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 51 - G - - - ML 173 172 3 175 3 1 1 52 71 -7.846 -0.370 -2.171 -1.328 -2.507 1.658 -1.892 D 174 172 3 175 3 0 0 50 70 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 52 - C - - - ML 176 175 3 178 3 1 1 51 70 -7.504 -0.028 -6.159 -0.722 1.172 -1.486 -0.353 D 177 175 3 178 3 0 0 48 68 -7.658 -3.171 -0.178 IL 178 178 3 178 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - A - - - ML 179 178 3 181 3 1 1 50 69 -7.504 -0.028 -6.159 1.427 -1.482 -1.201 -0.951 D 180 178 3 181 3 0 0 48 67 -7.658 -3.171 -0.178 IL 181 181 3 181 3 1 1 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - A - - - ML 182 181 3 184 5 1 1 49 68 -6.701 -0.051 -6.516 -6.728 -7.620 1.427 -1.482 -1.201 -0.951 D 183 181 3 184 5 0 0 47 67 -5.968 -0.344 -5.229 -3.604 -3.517 IL 184 184 3 184 5 1 1 49 68 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 55 98 C G - - MP 185 184 3 189 6 2 2 48 67 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.314 -4.198 -4.043 -0.453 -2.815 -4.485 3.471 -3.601 -4.085 -0.176 -4.370 -2.142 0.722 -4.398 -0.516 -2.933 ML 186 184 3 189 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 3 189 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 3 189 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 56 97 a u - - MP 191 190 6 195 6 2 2 46 65 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.362 -2.464 -3.430 2.831 -3.743 -4.585 0.551 -3.577 -3.350 1.956 -3.878 -0.024 0.213 -3.786 -1.386 -2.295 ML 192 190 6 195 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 6 195 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 6 195 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 57 96 u a - - MP 197 196 6 201 6 2 2 44 63 -9.060 -8.999 -0.125 -7.776 -8.056 -3.819 -3.282 -3.038 -3.286 0.987 -2.596 -4.035 1.717 -3.144 -3.282 0.955 -3.748 -0.922 2.654 -3.510 -0.291 -2.195 ML 198 196 6 201 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 58 95 u a - - MP 203 202 6 207 4 2 2 42 61 -6.476 -7.721 -0.177 -3.325 -3.333 -3.177 -3.241 0.470 -2.328 -3.844 2.127 -2.988 -3.270 0.865 -3.670 -1.150 2.532 -3.481 -0.024 -2.160 ML 204 202 6 207 4 1 1 41 60 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 4 1 1 41 60 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 206 202 6 207 4 0 0 39 58 -15.374 -16.643 -4.672 -0.058 IL 207 207 5 207 4 1 1 41 60 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 208 208 6 208 3 1 1 41 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 58 ] - 94 - u - - MR 209 208 6 211 5 1 1 40 59 -6.701 -0.051 -6.516 -6.728 -7.620 0.033 -0.542 -0.918 0.816 D 210 208 6 211 5 0 0 38 58 -6.238 -0.339 -3.865 -5.296 -3.290 IR 211 211 3 211 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 59 93 C G - - MP 212 211 3 216 6 2 2 39 58 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -4.314 -4.198 -4.043 -0.453 -2.815 -4.485 3.471 -3.601 -4.085 -0.176 -4.370 -2.142 0.722 -4.398 -0.516 -2.933 ML 213 211 3 216 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 214 211 3 216 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 215 211 3 216 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 216 216 5 216 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 217 217 6 217 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 60 92 c g - - MP 218 217 6 222 6 2 2 37 56 -9.060 -4.714 -0.076 -7.776 -8.056 -8.451 -3.235 -3.210 -3.252 0.379 -0.835 -3.957 2.968 -3.119 -3.269 0.828 -3.732 -1.294 1.206 -3.454 -0.247 -2.216 ML 219 217 6 222 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 220 217 6 222 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 221 217 6 222 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 222 222 5 222 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 223 223 6 223 5 1 1 36 55 -2.247 -0.494 -6.290 -4.457 -5.563 0.000 0.000 0.000 0.000 [ MATP 61 ] 61 89 G C - - MP 224 223 6 228 6 2 2 34 54 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.861 -2.728 -3.849 0.768 -3.980 -4.302 0.512 -4.086 -3.806 3.269 -4.182 -0.427 0.408 -3.784 -1.494 -2.770 ML 225 223 6 228 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 226 223 6 228 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 227 223 6 228 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 228 228 5 228 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 229 229 6 229 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 62 88 a u - - MP 230 229 6 234 6 2 2 32 52 -3.449 -8.999 -0.160 -7.776 -8.056 -8.451 -2.692 -1.744 -2.800 2.588 -2.905 -3.715 0.932 -3.067 -2.861 1.600 -3.385 -0.247 0.675 -2.980 -0.824 -0.399 ML 231 229 6 234 6 1 1 30 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 232 229 6 234 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 233 229 6 234 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 234 234 5 234 6 1 1 33 52 -2.820 -1.406 -1.222 -5.470 -6.246 -5.907 0.000 0.000 0.000 0.000 IR 235 235 6 235 5 1 1 32 51 -1.610 -0.704 -6.726 -4.894 -6.000 0.000 0.000 0.000 0.000 [ MATP 63 ] 65 83 G C - - MP 236 235 6 240 6 2 2 30 49 -9.060 -7.228 -0.029 -7.776 -8.056 -8.451 -4.344 -2.898 -4.410 0.599 -4.799 -4.567 -0.226 -4.667 -4.083 3.520 -4.452 -0.575 -0.587 -4.204 -2.243 -3.295 ML 237 235 6 240 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 238 235 6 240 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 239 235 6 240 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 240 240 5 240 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 241 241 6 241 5 1 1 29 48 -2.447 -0.481 -5.958 -4.126 -5.232 0.000 0.000 0.000 0.000 [ MATP 64 ] 66 81 G C - - MP 242 241 6 246 6 2 2 28 47 -9.060 -8.999 -0.022 -7.776 -8.056 -8.451 -3.799 -1.907 -3.823 0.857 -4.360 -4.293 0.109 -4.211 -3.778 3.302 -4.163 0.224 -0.174 -3.728 -1.848 -2.770 ML 243 241 6 246 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 244 241 6 246 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 245 241 6 246 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 246 246 5 246 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 247 247 6 247 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 67 80 g c - - MP 248 247 6 252 4 2 2 25 45 -6.820 -7.027 -0.058 -5.441 -3.403 -2.417 -3.437 1.884 -3.853 -4.259 0.532 -3.736 -3.452 2.835 -3.907 0.221 0.237 -3.541 -1.417 -2.357 ML 249 247 6 252 4 1 1 26 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 250 247 6 252 4 1 1 25 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 251 247 6 252 4 0 0 24 44 -4.568 -4.250 -2.265 -0.520 IL 252 252 5 252 4 1 1 27 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 253 253 6 253 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 68 - G - - - ML 254 253 6 256 3 1 1 23 42 -8.245 -0.193 -3.034 -0.655 -2.015 1.455 -1.412 D 255 253 6 256 3 0 0 22 40 -5.620 -0.734 -1.403 IL 256 256 3 256 3 1 1 24 43 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 67 ] - 79 - g - - MR 257 256 3 259 5 1 1 22 41 -3.301 -0.192 -6.649 -6.861 -7.752 -0.149 -0.111 0.287 -0.071 D 258 256 3 259 5 0 0 21 39 -5.920 -0.437 -3.546 -4.977 -2.972 IR 259 259 3 259 5 1 1 22 41 -2.490 -0.434 -6.243 -4.411 -5.517 0.000 0.000 0.000 0.000 [ MATP 68 ] 69 76 g c - - MP 260 259 3 264 4 2 2 21 39 -3.207 -3.256 -0.388 -5.441 -2.805 -1.855 -2.101 1.833 -3.099 -3.652 0.955 -3.228 -3.006 2.518 -3.469 0.057 0.692 -2.917 -0.869 -1.913 ML 261 259 3 264 4 1 1 19 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 262 259 3 264 4 1 1 19 38 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 263 259 3 264 4 0 0 18 37 -4.568 -4.250 -2.265 -0.520 IL 264 264 5 264 4 1 1 21 39 -2.170 -1.240 -1.601 -5.338 0.000 0.000 0.000 0.000 IR 265 265 6 265 3 1 1 20 38 -1.451 -0.739 -4.827 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - c - - - ML 266 265 6 268 3 1 1 15 33 -7.846 -0.022 -6.500 0.060 0.619 -0.894 -0.178 D 267 265 6 268 3 0 0 15 33 -6.174 -1.687 -0.566 IL 268 268 3 268 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 72 - c - - - ML 269 268 3 271 3 1 1 13 32 -7.846 -0.022 -6.500 -0.164 0.670 -1.067 0.055 D 270 268 3 271 3 0 0 13 32 -6.174 -1.687 -0.566 IL 271 271 3 271 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 73 - G - - - ML 272 271 3 274 2 1 1 1 1 * 0.000 -0.085 -1.267 1.042 -0.780 D 273 271 3 274 2 0 0 0 0 * 0.000 IL 274 274 3 274 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 275 274 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME HDV_ribozyme ACC RF00094 DESC Hepatitis delta virus ribozyme LENG 89 MAXL 179 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 08:21:48 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF00094/CM NSEQ 33 EFFN 2.807739 CKSUM 457633856 STATS LOCAL MSV -9.4105 0.71880 STATS LOCAL VITERBI -10.2998 0.71880 STATS LOCAL FORWARD -2.9473 0.71880 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.66309 1.22271 1.16147 1.59459 1.38629 1.38629 1.38629 1.38629 0.05672 4.03749 3.28343 1.46634 0.26236 0.00000 * 1 1.29827 2.01633 1.44931 1.02410 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.03666 4.01743 4.01743 1.46634 0.26236 0.66316 0.72407 2 2.05346 1.07307 2.60786 0.78513 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 3 1.99429 3.13990 0.26342 2.95299 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 4 2.72734 3.45908 0.13957 3.39880 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 5 2.19220 1.03151 1.02395 1.75628 5 g - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 6 2.64538 0.78586 2.40212 0.96033 6 c - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 7 1.96133 1.26110 0.93866 1.68831 7 g - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 8 2.72220 3.45244 0.14055 3.38970 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 9 2.19042 1.03195 1.02431 1.75576 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 10 0.83430 1.23092 2.29530 1.75408 10 a - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 11 1.04637 2.07412 2.23984 0.87551 11 u - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 12 1.76660 2.19373 0.98002 1.07212 12 g - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 13 2.91610 3.82172 0.11603 3.39559 13 G - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 14 1.66187 1.79088 1.24222 1.03659 14 u - - - 1.38629 1.38629 1.38629 1.38629 0.06157 4.03749 3.16848 1.46634 0.26236 1.09861 0.40547 15 2.38991 0.34380 2.61827 2.06860 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.38724 1.19405 4.01276 0.11537 2.21677 0.60908 0.78494 16 2.06238 0.90935 2.62856 0.92160 17 c - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 17 3.10427 0.15612 3.67870 2.59788 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 18 0.89366 2.09265 2.22200 1.02417 19 a - - - 1.38629 1.38629 1.38629 1.38629 0.37576 1.21878 4.03749 0.91547 0.51137 1.09861 0.40547 19 1.23795 2.60251 0.59565 2.46829 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 20 3.38001 0.19580 3.19835 2.27352 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 21 3.39556 0.19441 3.20633 2.27642 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 22 2.81172 2.74180 3.33647 0.17449 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 23 2.43065 0.27075 3.18511 2.22713 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 24 3.10427 0.15612 3.67870 2.59788 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 25 2.09781 1.34673 2.63590 0.60600 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 26 2.84924 0.21989 3.43109 2.23351 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 27 2.03161 2.57721 0.34898 2.43634 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 28 1.97583 0.65557 2.24591 1.44233 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.37576 4.03749 1.21878 1.46634 0.26236 1.09861 0.40547 29 2.02196 1.93634 2.52277 0.44140 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05010 3.71183 3.71183 1.46634 0.26236 0.11276 2.23832 30 2.55331 3.37477 0.16744 3.16723 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 31 2.55023 3.37027 0.16816 3.16200 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 32 2.70421 0.67422 2.42017 1.09478 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 33 1.99922 1.10301 0.94425 1.93991 42 g - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 34 3.57805 0.16762 3.29052 2.41736 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 35 1.92257 1.05150 1.11936 1.72671 44 c - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 36 1.07892 2.56866 0.70668 2.40662 45 g - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 37 1.99911 1.10304 0.94428 1.93984 46 g - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 38 3.57074 0.16815 3.28713 2.41597 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 39 3.13041 1.72825 2.91792 0.32206 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 40 2.91610 3.82172 0.11603 3.39559 49 G - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 41 2.91610 3.82172 0.11603 3.39559 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 42 2.91610 3.82172 0.11603 3.39559 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.37576 4.03749 1.21878 1.46634 0.26236 1.09861 0.40547 43 2.33461 0.34247 2.89486 1.98171 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.05010 3.71183 3.71183 1.46634 0.26236 2.93147 0.05479 44 0.24843 2.81282 2.57956 2.47536 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.05010 3.71183 3.71183 1.46634 0.26236 2.93147 0.05479 45 0.24843 2.81282 2.57956 2.47536 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.05010 3.71183 3.71183 1.46634 0.26236 0.11276 2.23832 46 3.38786 0.19510 3.20238 2.27498 55 C - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 47 0.52301 2.73961 1.31465 2.60231 56 A - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 48 1.96815 1.64728 2.06603 0.61429 57 U - - < 1.38629 1.38629 1.38629 1.38629 0.30671 4.03749 1.40043 1.46634 0.26236 1.09861 0.40547 49 2.43578 1.25512 2.15347 0.67071 58 U - - < 1.38629 1.38629 1.38629 1.38629 0.04683 3.77762 3.77762 1.46634 0.26236 0.13378 2.07770 50 3.33720 0.19977 3.17608 2.26534 59 C - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 51 2.43894 0.53072 2.01241 1.65601 60 C - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 52 2.25358 2.65842 0.31721 2.33573 61 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 53 0.65058 2.28535 1.57969 1.76915 62 A - - < 1.38629 1.38629 1.38629 1.38629 0.40652 1.15077 4.03749 0.21594 1.63879 1.09861 0.40547 54 2.43560 3.30047 0.18045 3.20168 65 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 55 2.10574 2.88541 0.27701 2.74316 66 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 56 1.27480 2.55887 0.59099 2.41530 67 G - - < 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 57 2.13481 3.26354 0.23998 2.86753 68 G - - - 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 58 1.24498 2.17269 0.76682 2.01221 69 g - - < 1.38629 1.38629 1.38629 1.38629 0.16984 1.97649 4.03749 0.23769 1.55327 1.09861 0.40547 59 1.39884 0.81240 2.13735 1.65360 71 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 60 1.60384 0.77988 2.29997 1.42648 72 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 61 1.56498 2.46259 0.51784 2.20832 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.32015 1.36134 4.03749 0.52094 0.90130 1.09861 0.40547 62 2.25318 0.86722 1.92120 1.11356 76 c - - > 1.38629 1.38629 1.38629 1.38629 0.38123 1.93453 1.75744 0.33866 1.24730 1.09861 0.40547 63 1.61403 1.42425 1.06169 1.54011 79 g - - - 1.38629 1.38629 1.38629 1.38629 0.04264 3.86926 3.86926 1.46634 0.26236 0.18611 1.77301 64 2.64749 0.71238 2.36789 1.06416 80 c - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 65 2.96310 0.35636 2.69903 1.71010 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.05248 3.39662 4.03749 0.84801 0.55908 1.09861 0.40547 66 3.37652 0.21302 3.12772 2.17265 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.28540 1.46687 4.03749 0.77090 0.62101 1.09861 0.40547 67 2.33909 1.72072 2.08826 0.50959 88 U - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 68 2.50836 0.36143 2.48354 1.97709 89 C - - > 1.38629 1.38629 1.38629 1.38629 0.17085 1.97030 4.03749 0.49319 0.94334 1.09861 0.40547 69 1.67724 2.15041 0.52930 2.22881 92 G - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 70 2.55391 3.37564 0.16730 3.16823 93 G - - > 1.38629 1.38629 1.38629 1.38629 0.37576 4.03749 1.21878 1.46634 0.26236 1.09861 0.40547 71 1.42735 1.85079 2.16754 0.71645 94 u - - - 1.38629 1.38629 1.38629 1.38629 0.05010 3.71183 3.71183 1.46634 0.26236 1.60092 0.22528 72 0.77106 2.31551 1.11551 2.19811 95 a - - > 1.38629 1.38629 1.38629 1.38629 0.04683 3.77762 3.77762 1.46634 0.26236 0.13378 2.07770 73 0.68888 2.25866 1.48354 1.79253 96 A - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 74 2.79473 1.50796 2.53578 0.44893 97 U - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 75 2.51920 3.32535 0.17564 3.11007 98 G - - > 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 76 2.91610 3.82172 0.11603 3.39559 99 G - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 77 3.10427 0.15612 3.67870 2.59788 100 C - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 78 1.30900 2.06616 1.22814 1.16988 101 u - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 79 0.19643 3.10590 2.60100 2.82424 102 A - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 80 0.12320 3.45238 3.15605 3.17846 103 A - - : 1.38629 1.38629 1.38629 1.38629 0.37576 1.21878 4.03749 1.11479 0.39748 1.09861 0.40547 81 1.04637 2.07412 2.23984 0.87551 107 u - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 82 2.91610 3.82172 0.11603 3.39559 108 G - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 83 1.06225 2.33859 0.93323 1.80437 109 g - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 84 2.43740 3.15496 0.23925 2.49184 110 G - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 85 1.00541 1.27467 1.83851 1.63204 111 a - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 86 3.10427 0.15612 3.67870 2.59788 112 C - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 87 1.07871 1.08804 2.05057 1.63770 113 a - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 88 1.72793 0.85490 1.55895 1.67843 114 c - - : 1.38629 1.38629 1.38629 1.38629 0.03592 4.03749 4.03749 1.46634 0.26236 1.09861 0.40547 89 1.06594 1.51867 2.04173 1.18160 115 a - - : 1.38629 1.38629 1.38629 1.38629 0.01812 4.01969 * 1.46634 0.26236 0.00000 * //